Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000227

Physical Location & Seq

Genomic Coordinates Reverse (-)

17608400 .. 17612683

Gene Structure 4284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24560.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGAGTCGGCGAGCATACTTCGATATCTGGAGGGGAAGACCATCTTAGTTACCGGAGGTACCGGCTTCCTGGGAATGGTGTTTCTGGAGAAAATACTGAGAGTTCAACCAGATGTGCAAAAGATCTACCTCCTTCTAAGAGCCTCGGACACCAAATCAGCGACAAAGCGCATGAACAATGAGATCATAGGAAAGGAATTGTTCAGAGTTTTGAAGGAGAAACGAGGGGCAGATTTTGATTCCTTCATTTCGGAAAAAGTTGTTGCTCTACCGGGAGACGTCACTTCTGAAAACCTCGGAGTTAAAGACTTGAAGGTGTACAATGAAATACAAATCATATTCAACTGTGCAGCCACCACAAACTTCGACGAAAGGTATGATATCGCACTGGACGTCAACACATTTGGGGTGCTGTATGCAATAGACTTTGCTAAGAAATGCTCAAAACTAGAGATGTTTCTCCACGTATCAACTGCTTATGTATGTGGAGAGAGGGGTGGACTCTTACTGGAAGACTCATCTTCCATGGATGAAATGATTAAGCAGATGACCAAATTTGATTTTGAAGCAGTGGAAAAGAAACTTGTCAAGGAGAAACTGAATGAACTAAAAGCACAAGGTGTTTCACAAGAAGTTATTACAAATACAATGAAGGATTTCGGCATTGAAAGGGCTAAAGTATATGGATGGCCAAACACGTATGTATTTACAAAAGCGATGGGAGAAATATATATTGGACGCTTAAAACACAATCTACCTCATGTCATTGTTCGTCCAACAGTCGTTACTAGCACTTACAAGGAACCATTTCCTGGTTGGATTCAAGGATTCAGAACCATTGATAGCGTAATTGCTAGCTATTATAAAGGGAAGCTGCCATGTCTACTCGTCGACCCAATGTTAGTTTTTGATATGATTCCGGTGGACATGCTGGTGAATTCGATAATCGTAGCAATGGCAGTGAATGCAAATAAATCTTCTAGCATCATATATCATGTAGGAACCTCACTGAGAAATCCTATAAAATTCTGTGATATTCATGATATCGTCTTCAAATACTGCACCGAGAATCCATGGATTAACAAGGATGGCACCATTGTTAAGGCTGGCAAGTTTACAATGTTCAAGACTATGGCTAGCTTTCACATGTACATGCAAATTCGATACATGCTACCTTTGCAGGGATTAAGGTTGGTGAATATAGCATTTGGCCAATATTTTCAAGACTTGTATGTCAACTATGATCGTAAACTCAGATTGGTGATGCGCTTGGTAGAGCTATACAAACCCTACATGTTATTCAAGGGCATCTTTGACGACACCAATTCAGAAGAGTTACAAAGGATAGCAATAGAGACTTATACAGACGCAGAAATGTTCAAGTCTGATCCGAAATGCATTAACTGGGAAGACTACATTTCCAACACTCATGTTCCTGGCCTTCGAAAACATGTTATGCTCAAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009259 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0016020 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019637 GO:0019693 GO:0019748 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035336 GO:0035337 GO:0035383 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046483 GO:0050062 GO:0050896 GO:0051186 GO:0055086 GO:0055114 GO:0071704 GO:0071944 GO:0072521 GO:0080019 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901568 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 ko04146 ko04212 map00073 map04146 map04212

Pfam Domains

Protein Families

NAD_binding_4 Sterile

Protein Analysis

490

Amino Acids

56.07

Weight (kDa)

8.66

Isoelectric Point (pI)

28.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_4	PF07993	17 - 315	1.5e-71	Male sterility protein
Sterile	PF03015	389 - 486	1.2e-15	Male sterility protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca	FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica	MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica	Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis	pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis	RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata	RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora	Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii	Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa	Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha	Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana	Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	864
AasI	GACNNNNNNGTC	1 cut(s)	1232
AatII	GACGTC	2 cut(s)	282, 396
Acc65I	GGTACC	1 cut(s)	59
AccB1I	GGYRCC	2 cut(s)	59, 1091
AccB7I	CCANNNNNTGG	1 cut(s)	812
AccI	GTMKAC	2 cut(s)	883, 891
AclWI	GGATC	1 cut(s)	1382
AcoI	YGGCCR	2 cut(s)	689, 1210
AcsI	RAATTY	4 cut(s)	554, 937, 1025, 1158
AcyI	GRCGYC	2 cut(s)	279, 393
AdeI	CACNNNGTG	1 cut(s)	620
AfaI	GTAC	3 cut(s)	61, 320, 1151
AfiI	CCNNNNNNNGG	3 cut(s)	76, 812, 1181
AflIII	ACRYGT	4 cut(s)	696, 1146, 1293, 1450
AjnI	CCWGG	3 cut(s)	69, 811, 1435
AjuI	GAANNNNNNNTTGG	2 cut(s)	717, 749
AluBI	AGCT	4 cut(s)	858, 874, 1140, 1279
AluI	AGCT	4 cut(s)	858, 874, 1140, 1279
Alw26I	GTCTC	2 cut(s)	270, 1349
AlwI	GGATC	1 cut(s)	1382
AoxI	GGCC	3 cut(s)	689, 1210, 1438
ApeKI	GCWGC	2 cut(s)	350, 874
ApoI	RAATTY	4 cut(s)	554, 937, 1025, 1158
Asp700I	GAANNNNTTC	2 cut(s)	656, 807
Asp718I	GGTACC	1 cut(s)	59
AspLEI	GCGC	2 cut(s)	171, 1269
AsuC2I	CCSGG	1 cut(s)	273
AsuHPI	GGTGA	3 cut(s)	946, 1207, 1273
AsuII	TTCGAA	1 cut(s)	1444
AsuNHI	GCTAGC	2 cut(s)	854, 1136
BalI	TGGCCA	2 cut(s)	691, 1212
BanI	GGYRCC	2 cut(s)	59, 1091
BbsI	GAAGAC	4 cut(s)	44, 519, 1042, 1416
BbvI	GCAGC	2 cut(s)	362, 861
BccI	CCATC	4 cut(s)	50, 681, 712, 1082
BciT130I	CCWGG	3 cut(s)	71, 813, 1437
BcnI	CCSGG	1 cut(s)	273
BcoDI	GTCTC	2 cut(s)	270, 1349
BfaI	CTAG	5 cut(s)	449, 789, 855, 981, 1137
BglII	AGATCT	1 cut(s)	123
BisI	GCNGC	2 cut(s)	351, 875
BlsI	GCNGC	2 cut(s)	352, 876
Bme1390I	CCNGG	4 cut(s)	71, 273, 813, 1437
BmiI	GGNNCC	4 cut(s)	61, 804, 1003, 1093
BmrFI	CCNGG	4 cut(s)	71, 273, 813, 1437
BmrI	ACTGGG	1 cut(s)	1414
BmsI	GCATC	3 cut(s)	993, 1254, 1317
BmtI	GCTAGC	2 cut(s)	858, 1140
BmuI	ACTGGG	1 cut(s)	1414
BpiI	GAAGAC	4 cut(s)	44, 519, 1042, 1416
BpmI	CTGGAG	2 cut(s)	50, 107
Bpu14I	TTCGAA	1 cut(s)	1444
BpuMI	CCSGG	1 cut(s)	273
BsaAI	YACGTR	2 cut(s)	466, 699
BsaHI	GRCGYC	2 cut(s)	279, 393
BsaJI	CCNNGG	5 cut(s)	70, 144, 295, 525, 1073
BsaWI	WCCGGW	2 cut(s)	53, 919
Bsc4I	CCNNNNNNNGG	3 cut(s)	76, 812, 1181
Bse118I	RCCGGY	1 cut(s)	62
Bse1I	ACTGG	3 cut(s)	393, 513, 1409
Bse3DI	GCAATG	1 cut(s)	960
BseBI	CCWGG	3 cut(s)	71, 813, 1437
BseDI	CCNNGG	5 cut(s)	70, 144, 295, 525, 1073
BseGI	GGATG	3 cut(s)	535, 692, 1093
BseLI	CCNNNNNNNGG	3 cut(s)	76, 812, 1181
BseMI	GCAATG	1 cut(s)	960
BseMII	CTCAG	3 cut(s)	89, 1001, 1267
BseNI	ACTGG	3 cut(s)	393, 513, 1409
BseXI	GCAGC	2 cut(s)	362, 861
BsgI	GTGCAG	2 cut(s)	369, 1045
BshFI	GGCC	3 cut(s)	691, 1212, 1440
BshNI	GGYRCC	2 cut(s)	59, 1091
BsiSI	CCGG	4 cut(s)	54, 63, 272, 920
BslI	CCNNNNNNNGG	3 cut(s)	76, 812, 1181
BsmAI	GTCTC	2 cut(s)	270, 1349
BsmBI	CGTCTC	1 cut(s)	270
BsmI	GAATGC	1 cut(s)	970
BsnI	GGCC	3 cut(s)	691, 1212, 1440
Bsp119I	TTCGAA	1 cut(s)	1444
Bsp1407I	TGTACA	2 cut(s)	318, 1149
Bsp143I	GATC	4 cut(s)	123, 183, 1243, 1387
Bsp19I	CCATGG	2 cut(s)	525, 1073
BspANI	GGCC	3 cut(s)	691, 1212, 1440
BspCNI	CTCAG	3 cut(s)	90, 1002, 1266
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	4 cut(s)	61, 804, 1003, 1093
BspOI	GCTAGC	2 cut(s)	858, 1140
BspPI	GGATC	1 cut(s)	1382
BspT104I	TTCGAA	1 cut(s)	1444
BspT107I	GGYRCC	2 cut(s)	59, 1091
BsrDI	GCAATG	1 cut(s)	960
BsrFI	RCCGGY	1 cut(s)	62
BsrGI	TGTACA	2 cut(s)	318, 1149
BsrI	ACTGG	3 cut(s)	393, 513, 1409
BssAI	RCCGGY	1 cut(s)	62
BssECI	CCNNGG	5 cut(s)	70, 144, 295, 525, 1073
BssMI	GATC	4 cut(s)	123, 183, 1243, 1387
BssNI	GRCGYC	2 cut(s)	279, 393
BssT1I	CCWWGG	2 cut(s)	525, 1073
Bst2UI	CCWGG	3 cut(s)	71, 813, 1437
Bst4CI	ACNGT	2 cut(s)	347, 781
Bst6I	CTCTTC	1 cut(s)	1326
BstACI	GRCGYC	2 cut(s)	279, 393
BstAPI	GCANNNNNTGC	1 cut(s)	965
BstAUI	TGTACA	2 cut(s)	318, 1149
BstBAI	YACGTR	2 cut(s)	466, 699
BstBI	TTCGAA	1 cut(s)	1444
BstC8I	GCNNGC	4 cut(s)	13, 856, 1108, 1138
BstDEI	CTNAG	6 cut(s)	46, 98, 137, 432, 1010, 1253
BstDSI	CCRYGG	2 cut(s)	525, 1073
BstF5I	GGATG	3 cut(s)	535, 692, 1093
BstHHI	GCGC	2 cut(s)	171, 1269
BstKTI	GATC	4 cut(s)	126, 186, 1246, 1390
BstMAI	GTCTC	2 cut(s)	270, 1349
BstMBI	GATC	4 cut(s)	123, 183, 1243, 1387
BstMWI	GCNNNNNNNGC	2 cut(s)	965, 1177
BstNI	CCWGG	3 cut(s)	71, 813, 1437
BstNSI	RCATGY	6 cut(s)	931, 1150, 1156, 1171, 1297, 1454
BstSCI	CCNGG	4 cut(s)	69, 271, 811, 1435
BstV1I	GCAGC	2 cut(s)	362, 861
BstV2I	GAAGAC	4 cut(s)	44, 519, 1042, 1416
BstX2I	RGATCY	1 cut(s)	123
BstYI	RGATCY	1 cut(s)	123
BsuRI	GGCC	3 cut(s)	691, 1212, 1440
BtgI	CCRYGG	2 cut(s)	525, 1073
BtgZI	GCGATG	1 cut(s)	731
BtsCI	GGATG	3 cut(s)	535, 692, 1093
BtsI	GCAGTG	2 cut(s)	576, 966
BtsIMutI	CAGTG	4 cut(s)	386, 576, 966, 1007
Cac8I	GCNNGC	4 cut(s)	13, 856, 1108, 1138
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	2 cut(s)	171, 1269
Cfr10I	RCCGGY	1 cut(s)	62
CseI	GACGC	2 cut(s)	747, 1376
Csp6I	GTAC	3 cut(s)	60, 319, 1150
CviQI	GTAC	3 cut(s)	60, 319, 1150
DdeI	CTNAG	6 cut(s)	46, 98, 137, 432, 1010, 1253
DpnI	GATC	4 cut(s)	125, 185, 1245, 1389
DpnII	GATC	4 cut(s)	123, 183, 1243, 1387
DraIII	CACNNNGTG	1 cut(s)	620
DrdI	GACNNNNNNGTC	1 cut(s)	1232
DseDI	GACNNNNNNGTC	1 cut(s)	1232
EaeI	YGGCCR	2 cut(s)	689, 1210
Eam1104I	CTCTTC	1 cut(s)	1326
EarI	CTCTTC	1 cut(s)	1326
Eco130I	CCWWGG	2 cut(s)	525, 1073
Eco32I	GATATC	3 cut(s)	26, 382, 1045
EcoRI	GAATTC	1 cut(s)	937
EcoRII	CCWGG	3 cut(s)	69, 811, 1435
EcoRV	GATATC	3 cut(s)	26, 382, 1045
EcoT14I	CCWWGG	2 cut(s)	525, 1073
EcoT22I	ATGCAT	1 cut(s)	1400
ErhI	CCWWGG	2 cut(s)	525, 1073
Esp3I	CGTCTC	1 cut(s)	270
FalI	AAGNNNNNCTT	4 cut(s)	29, 61, 1295, 1327
FblI	GTMKAC	2 cut(s)	883, 891
Fnu4HI	GCNGC	2 cut(s)	351, 875
FokI	GGATG	3 cut(s)	542, 699, 1100
Fsp4HI	GCNGC	2 cut(s)	351, 875
FspBI	CTAG	5 cut(s)	449, 789, 855, 981, 1137
GlaI	GCGC	2 cut(s)	170, 1268
GluI	GCNGC	2 cut(s)	351, 875
GsuI	CTGGAG	2 cut(s)	50, 107
HaeIII	GGCC	3 cut(s)	691, 1212, 1440
HapII	CCGG	4 cut(s)	54, 63, 272, 920
HgaI	GACGC	2 cut(s)	747, 1376
HhaI	GCGC	2 cut(s)	171, 1269
Hin1I	GRCGYC	2 cut(s)	279, 393
Hin6I	GCGC	2 cut(s)	169, 1267
HinP1I	GCGC	2 cut(s)	169, 1267
HincII	GTYRAC	3 cut(s)	397, 892, 1237
HindII	GTYRAC	3 cut(s)	397, 892, 1237
HinfI	GANTC	8 cut(s)	5, 239, 501, 515, 820, 828, 916, 1069
HpaII	CCGG	4 cut(s)	54, 63, 272, 920
HphI	GGTGA	3 cut(s)	946, 1207, 1273
Hpy166II	GTNNAC	9 cut(s)	319, 397, 500, 884, 892, 925, 1116, 1237, 1250
Hpy188III	TCNNGA	5 cut(s)	29, 86, 1040, 1126, 1223
Hpy8I	GTNNAC	9 cut(s)	319, 397, 500, 884, 892, 925, 1116, 1237, 1250
Hpy99I	CGWCG	2 cut(s)	371, 893
HpyAV	CCTTC	6 cut(s)	143, 208, 253, 307, 646, 1451
HpyCH4III	ACNGT	2 cut(s)	347, 781
HpyCH4IV	ACGT	4 cut(s)	279, 393, 465, 698
HpyCH4V	TGCA	8 cut(s)	118, 350, 419, 968, 1062, 1156, 1180, 1398
HpyF10VI	GCNNNNNNNGC	2 cut(s)	965, 1177
HpyF3I	CTNAG	6 cut(s)	46, 98, 137, 432, 1010, 1253
HpySE526I	ACGT	4 cut(s)	279, 393, 465, 698
Hsp92I	GRCGYC	2 cut(s)	279, 393
HspAI	GCGC	2 cut(s)	169, 1267
KpnI	GGTACC	1 cut(s)	63
Kzo9I	GATC	4 cut(s)	123, 183, 1243, 1387
Lsp1109I	GCAGC	2 cut(s)	362, 861
LweI	GCATC	3 cut(s)	993, 1254, 1317
MaeI	CTAG	5 cut(s)	449, 789, 855, 981, 1137
MaeII	ACGT	4 cut(s)	279, 393, 465, 698
MaeIII	GTNAC	4 cut(s)	49, 280, 784, 1335
MalI	GATC	4 cut(s)	125, 185, 1245, 1389
MboI	GATC	4 cut(s)	123, 183, 1243, 1387
MboII	GAAGA	7 cut(s)	49, 513, 524, 969, 1042, 1343, 1421
MflI	RGATCY	1 cut(s)	123
MlsI	TGGCCA	2 cut(s)	691, 1212
MluCI	AATT	7 cut(s)	197, 554, 849, 937, 1025, 1158, 1324
MluNI	TGGCCA	2 cut(s)	691, 1212
MlyI	GAGTC	3 cut(s)	14, 495, 509
MmeI	TCCRAC	3 cut(s)	797, 800, 1446
MnlI	CCTC	9 cut(s)	25, 50, 140, 154, 218, 305, 486, 768, 1015
Mox20I	TGGCCA	2 cut(s)	691, 1212
Mph1103I	ATGCAT	1 cut(s)	1400
MroXI	GAANNNNTTC	2 cut(s)	656, 807
MscI	TGGCCA	2 cut(s)	691, 1212
MseI	TTAA	7 cut(s)	303, 540, 743, 1080, 1101, 1187, 1401
MslI	CAYNNNNRTG	2 cut(s)	932, 1151
Msp20I	TGGCCA	2 cut(s)	691, 1212
MspI	CCGG	4 cut(s)	54, 63, 272, 920
MspR9I	CCNGG	4 cut(s)	71, 273, 813, 1437
Mva1269I	GAATGC	1 cut(s)	970
MvaI	CCWGG	3 cut(s)	71, 813, 1437
MwoI	GCNNNNNNNGC	2 cut(s)	965, 1177
NciI	CCSGG	1 cut(s)	273
NcoI	CCATGG	2 cut(s)	525, 1073
NdeII	GATC	4 cut(s)	123, 183, 1243, 1387
NheI	GCTAGC	2 cut(s)	854, 1136
NlaIV	GGNNCC	4 cut(s)	61, 804, 1003, 1093
NmuCI	GTSAC	1 cut(s)	280
NsiI	ATGCAT	1 cut(s)	1400
NspI	RCATGY	6 cut(s)	931, 1150, 1156, 1171, 1297, 1454
NspV	TTCGAA	1 cut(s)	1444
PagI	TCATGA	1 cut(s)	1039
PciI	ACATGT	3 cut(s)	1146, 1293, 1450
PcsI	WCGNNNNNNNCGW	1 cut(s)	390
PctI	GAATGC	1 cut(s)	970
PdmI	GAANNNNTTC	2 cut(s)	656, 807
PfeI	GAWTC	5 cut(s)	239, 820, 828, 916, 1069
PflMI	CCANNNNNTGG	1 cut(s)	812
PkrI	GCNGC	2 cut(s)	352, 876
PleI	GAGTC	3 cut(s)	13, 495, 509
PpsI	GAGTC	3 cut(s)	13, 495, 509
Ppu21I	YACGTR	2 cut(s)	466, 699
PscI	ACATGT	3 cut(s)	1146, 1293, 1450
PsiI	TTATAA	1 cut(s)	864
Psp6I	CCWGG	3 cut(s)	69, 811, 1435
PspGI	CCWGG	3 cut(s)	69, 811, 1435
PspN4I	GGNNCC	4 cut(s)	61, 804, 1003, 1093
PsuI	RGATCY	1 cut(s)	123
RsaI	GTAC	3 cut(s)	61, 320, 1151
RsaNI	GTAC	3 cut(s)	60, 319, 1150
RseI	CAYNNNNRTG	2 cut(s)	932, 1151
SalI	GTCGAC	1 cut(s)	890
SaqAI	TTAA	7 cut(s)	303, 540, 743, 1080, 1101, 1187, 1401
SatI	GCNGC	2 cut(s)	351, 875
Sau3AI	GATC	4 cut(s)	123, 183, 1243, 1387
SchI	GAGTC	3 cut(s)	14, 495, 509
ScrFI	CCNGG	4 cut(s)	71, 273, 813, 1437
SfaNI	GCATC	3 cut(s)	993, 1254, 1317
SfuI	TTCGAA	1 cut(s)	1444
SmiMI	CAYNNNNRTG	2 cut(s)	932, 1151
Sse9I	AATT	7 cut(s)	197, 554, 849, 937, 1025, 1158, 1324
SspI	AATATT	1 cut(s)	1217
SspMI	CTAG	5 cut(s)	449, 789, 855, 981, 1137
StyD4I	CCNGG	4 cut(s)	69, 271, 811, 1435
StyI	CCWWGG	2 cut(s)	525, 1073
TaaI	ACNGT	2 cut(s)	347, 781
TaiI	ACGT	4 cut(s)	282, 396, 468, 701
TaqI	TCGA	6 cut(s)	22, 366, 891, 941, 1162, 1444
TasI	AATT	7 cut(s)	197, 554, 849, 937, 1025, 1158, 1324
TatI	WGTACW	2 cut(s)	318, 1149
TfiI	GAWTC	5 cut(s)	239, 820, 828, 916, 1069
Tru1I	TTAA	7 cut(s)	303, 540, 743, 1080, 1101, 1187, 1401
Tru9I	TTAA	7 cut(s)	303, 540, 743, 1080, 1101, 1187, 1401
TscAI	CASTG	4 cut(s)	393, 576, 966, 1014
TseFI	GTSAC	1 cut(s)	280
TseI	GCWGC	2 cut(s)	350, 874
Tsp45I	GTSAC	1 cut(s)	280
TspDTI	ATGAA	7 cut(s)	188, 235, 339, 546, 618, 665, 1028
TspRI	CASTG	4 cut(s)	393, 576, 966, 1014
Van91I	CCANNNNNTGG	1 cut(s)	812
XapI	RAATTY	4 cut(s)	554, 937, 1025, 1158
XceI	RCATGY	6 cut(s)	931, 1150, 1156, 1171, 1297, 1454
XcmI	CCANNNNNNNNNTGG	1 cut(s)	813
XmiI	GTMKAC	2 cut(s)	883, 891
XmnI	GAANNNNTTC	2 cut(s)	656, 807
XspI	CTAG	5 cut(s)	449, 789, 855, 981, 1137
ZraI	GACGTC	2 cut(s)	280, 394
Zsp2I	ATGCAT	1 cut(s)	1400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.