FvH4_5g01800

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
1143696 .. 1148195
4500 bp
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UTR
Exon/CDS
Intron
FvH4_5g01800.t1

Sequence Viewer

Length: 1314 bp
ATGCATAATGAGATTACAGGAAAAGAGTTGTTCAAGGTTTTGAAGGAGAAATGGGGTGCAGATTTTGATTCCTTCATATTAGAAAAGGTTGTTGCTTTGCCGGGAGACGTAAGATTTGAAGATCTAGGAGTGAAGCCAGTCAAACTGATGGAAGAGATATGTAACGAAGTACAAATCATACTTAACTCTGCAGCAATCACTACGTTTGAAGAGAGGTATGATATTGCATCGGAGGTGAATACATTTGGAGTTTTGAATCTGTTGGACTTTGCAAAGAAATGCTTGAAATTAGAGATGATTGTCCATGTCTCAACAGCTTATGTGTGTGGTGAAAGGGCCGGGATGATACTAGAGGACTCATCTTCAATGGAAGAAATGGCGAAAAAACCAAGTAAATATGATTTGAAATTACAGGAAAAGAAACTGGTGGAGGACAAATTGAAAGAGCTAAAAGCACTGAACGCTTCGGAAGAAGATATCACAAGTGCAATGAAGAATTTAGGCACTGCAAGGGCTAAGTTGTACGGATGGCCAAATACCTATGCGCTTACCAAGGTGATGGGAGAAATGTATCTAGGGCATGCAAAGGGTAATCTATCTATTGCTGTCGTACGTCCTACTATGATTACAAGTACATACAAGGAGCCATTTTCCGGCTGGATTGAAGGTTTCAGAACCTATGATAGCCTAATTGGTGGTTATTGGAAAGGGAAGCTCACTGGCATACCAGTCGATCCTATGGCAGTAGTTGATATGATTCCAGTTGACATGGTGGTAAATTCGATAATTACAGCTATGGTAGTTAACGCGAATAAATCTTTCAAAATCATTTACCACTTGGGAACCTCATATAGGAATCCCTTAATATTCTCTGATTTTAACAACTTTATGTTCCAATACTGCACCAAAAATCCATTGCTTAACGAGAATGGATTCCCCATCAAGGTTGGAAAGTTGAAAATGTTGAGGAGTATGGACGCTTTTCACTTGTATATGCAAATACCATTGCAGGCATTAAAGTTCATGAACAAGGAATTTGACCAATATTTCCAAGACATATACGTTAACTATAACATGAAAATCAAATCAGTGAGACGATTGGTTGAGCTCTACCGAGCATATTTGCTATTCAAGGGCATCTTTGATGACACTAATGCAGAGGTGTTGCGAAGGATAGCAAGCGAGAAGTACACAGATGCAGGAAGTTATAATTTTGATCCGAAATGCATAGATTGGGAAGACTACTTTATGCATACTCACATTCCTGGCCTTGCAAAGCATGTTATCATCAAACACAGACAAAGTCGGCTTTGA

Protein Analysis

438

Amino Acids

50.15

Weight (kDa)

8.04

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 3 - 262 4.7e-51 Male sterility protein
Sterile PF03015 356 - 429 1.1e-12 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1209
AccII CGCG 1 cut(s) 809
AclWI GGATC 2 cut(s) 728, 1211
AcoI YGGCCR 1 cut(s) 530
AcsI RAATTY 3 cut(s) 496, 778, 1034
AfaI GTAC 5 cut(s) 171, 524, 612, 634, 1190
AfiI CCNNNNNNNGG 3 cut(s) 653, 852, 943
AjnI CCWGG 1 cut(s) 1264
AluBI AGCT 5 cut(s) 317, 448, 715, 794, 1108
AluI AGCT 5 cut(s) 317, 448, 715, 794, 1108
Alw21I GWGCWC 1 cut(s) 1110
Alw26I GTCTC 3 cut(s) 99, 313, 1087
AlwI GGATC 2 cut(s) 728, 1211
AoxI GGCC 3 cut(s) 336, 530, 1267
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 3 cut(s) 496, 778, 1034
ArsI GACNNNNNNTTYG 2 cut(s) 98, 130
Asp700I GAANNNNTTC 1 cut(s) 932
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 1 cut(s) 336
AsuC2I CCSGG 2 cut(s) 102, 340
AsuHPI GGTGA 3 cut(s) 247, 341, 568
BalI TGGCCA 1 cut(s) 532
BanII GRGCYC 1 cut(s) 1110
BbsI GAAGAC 1 cut(s) 1245
Bbv12I GWGCWC 1 cut(s) 1110
BbvI GCAGC 1 cut(s) 203
BccI CCATC 4 cut(s) 142, 522, 553, 947
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BciT130I CCWGG 1 cut(s) 1266
BcnI CCSGG 2 cut(s) 102, 340
BcoDI GTCTC 3 cut(s) 99, 313, 1087
BfaI CTAG 3 cut(s) 125, 350, 575
BfmI CTRYAG 1 cut(s) 189
BglII AGATCT 1 cut(s) 121
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
Bme1390I CCNGG 3 cut(s) 102, 340, 1266
BmgT120I GGNCC 1 cut(s) 336
BmiI GGNNCC 2 cut(s) 645, 844
BmrFI CCNGG 3 cut(s) 102, 340, 1266
BmsI GCATC 3 cut(s) 236, 1146, 1186
BpiI GAAGAC 1 cut(s) 1245
BpuMI CCSGG 2 cut(s) 102, 340
BsaJI CCNNGG 1 cut(s) 552
Bsc4I CCNNNNNNNGG 3 cut(s) 653, 852, 943
Bse1I ACTGG 5 cut(s) 137, 429, 724, 728, 761
Bse3DI GCAATG 3 cut(s) 495, 914, 1004
BseBI CCWGG 1 cut(s) 1266
BseDI CCNNGG 1 cut(s) 552
BseGI GGATG 2 cut(s) 348, 533
BseLI CCNNNNNNNGG 3 cut(s) 653, 852, 943
BseMI GCAATG 3 cut(s) 495, 914, 1004
BseNI ACTGG 5 cut(s) 137, 429, 724, 728, 761
BseRI GAGGAG 1 cut(s) 982
BseXI GCAGC 1 cut(s) 203
BsgI GTGCAG 2 cut(s) 78, 886
Bsh1236I CGCG 1 cut(s) 809
BshFI GGCC 3 cut(s) 338, 532, 1269
BsiHKAI GWGCWC 1 cut(s) 1110
BsiSI CCGG 3 cut(s) 101, 339, 654
BsiWI CGTACG 1 cut(s) 610
BslI CCNNNNNNNGG 3 cut(s) 653, 852, 943
BsmAI GTCTC 3 cut(s) 99, 313, 1087
BsmBI CGTCTC 2 cut(s) 99, 1087
BsnI GGCC 3 cut(s) 338, 532, 1269
Bsp1286I GDGCHC 1 cut(s) 1110
Bsp143I GATC 3 cut(s) 121, 733, 1216
BspANI GGCC 3 cut(s) 338, 532, 1269
BspFNI CGCG 1 cut(s) 809
BspHI TCATGA 1 cut(s) 1023
BspLI GGNNCC 2 cut(s) 645, 844
BspMAI CTGCAG 1 cut(s) 193
BspPI GGATC 2 cut(s) 728, 1211
BsrDI GCAATG 3 cut(s) 495, 914, 1004
BsrI ACTGG 5 cut(s) 137, 429, 724, 728, 761
BssECI CCNNGG 1 cut(s) 552
BssMI GATC 3 cut(s) 121, 733, 1216
BssT1I CCWWGG 1 cut(s) 552
Bst2UI CCWGG 1 cut(s) 1266
Bst6I CTCTTC 2 cut(s) 147, 204
BstC8I GCNNGC 3 cut(s) 582, 1011, 1180
BstDEI CTNAG 1 cut(s) 516
BstENI CCTNNNNNAGG 1 cut(s) 850
BstF5I GGATG 2 cut(s) 348, 533
BstFNI CGCG 1 cut(s) 809
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 3 cut(s) 124, 736, 1219
BstMAI GTCTC 3 cut(s) 99, 313, 1087
BstMBI GATC 3 cut(s) 121, 733, 1216
BstMWI GCNNNNNNNGC 1 cut(s) 461
BstNI CCWGG 1 cut(s) 1266
BstNSI RCATGY 2 cut(s) 584, 1283
BstSCI CCNGG 3 cut(s) 100, 338, 1264
BstSFI CTRYAG 1 cut(s) 189
BstUI CGCG 1 cut(s) 809
BstV1I GCAGC 1 cut(s) 203
BstV2I GAAGAC 1 cut(s) 1245
BstX2I RGATCY 1 cut(s) 121
BstXI CCANNNNNNTGG 1 cut(s) 559
BstYI RGATCY 1 cut(s) 121
BsuRI GGCC 3 cut(s) 338, 532, 1269
BtsCI GGATG 2 cut(s) 348, 533
BtsI GCAGTG 1 cut(s) 504
BtsIMutI CAGTG 4 cut(s) 455, 504, 717, 1095
Cac8I GCNNGC 3 cut(s) 582, 1011, 1180
CciI TCATGA 1 cut(s) 1023
CfoI GCGC 1 cut(s) 547
Cfr13I GGNCC 1 cut(s) 336
CseI GACGC 1 cut(s) 986
Csp6I GTAC 5 cut(s) 170, 523, 611, 633, 1189
CviAII CATG 6 cut(s) 305, 581, 769, 1024, 1075, 1280
CviQI GTAC 5 cut(s) 170, 523, 611, 633, 1189
DdeI CTNAG 1 cut(s) 516
DpnI GATC 3 cut(s) 123, 735, 1218
DpnII GATC 3 cut(s) 121, 733, 1216
EaeI YGGCCR 1 cut(s) 530
Eam1104I CTCTTC 2 cut(s) 147, 204
EarI CTCTTC 2 cut(s) 147, 204
Ecl136II GAGCTC 1 cut(s) 1108
Eco130I CCWWGG 1 cut(s) 552
Eco24I GRGCYC 1 cut(s) 1110
Eco32I GATATC 1 cut(s) 478
Eco53kI GAGCTC 1 cut(s) 1108
EcoICRI GAGCTC 1 cut(s) 1108
EcoNI CCTNNNNNAGG 1 cut(s) 850
EcoRII CCWGG 1 cut(s) 1264
EcoRV GATATC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 552
EcoT22I ATGCAT 3 cut(s) 6, 1229, 1254
EcoT38I GRGCYC 1 cut(s) 1110
ErhI CCWWGG 1 cut(s) 552
Esp3I CGTCTC 2 cut(s) 99, 1087
FaeI CATG 6 cut(s) 308, 584, 772, 1027, 1078, 1283
FalI AAGNNNNNCTT 4 cut(s) 266, 298, 1124, 1156
FatI CATG 6 cut(s) 304, 580, 768, 1023, 1074, 1279
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 2 cut(s) 355, 540
FriOI GRGCYC 1 cut(s) 1110
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 3 cut(s) 125, 350, 575
GlaI GCGC 1 cut(s) 546
GluI GCNGC 1 cut(s) 192
HaeIII GGCC 3 cut(s) 338, 532, 1269
HapII CCGG 3 cut(s) 101, 339, 654
HgaI GACGC 1 cut(s) 986
HhaI GCGC 1 cut(s) 547
Hin1II CATG 6 cut(s) 308, 584, 772, 1027, 1078, 1283
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HincII GTYRAC 3 cut(s) 766, 805, 1066
HindII GTYRAC 3 cut(s) 766, 805, 1066
HinfI GANTC 6 cut(s) 68, 256, 356, 757, 856, 933
HpaI GTTAAC 2 cut(s) 805, 1066
HpaII CCGG 3 cut(s) 101, 339, 654
HphI GGTGA 3 cut(s) 247, 341, 568
Hpy166II GTNNAC 4 cut(s) 766, 805, 1066, 1191
Hpy188I TCNGA 5 cut(s) 232, 469, 674, 874, 1221
Hpy188III TCNNGA 1 cut(s) 1024
Hpy8I GTNNAC 4 cut(s) 766, 805, 1066, 1191
HpyAV CCTTC 4 cut(s) 37, 82, 659, 1164
HpyCH4IV ACGT 4 cut(s) 108, 203, 613, 1062
HpyF10VI GCNNNNNNNGC 1 cut(s) 461
HpyF3I CTNAG 1 cut(s) 516
HpySE526I ACGT 4 cut(s) 108, 203, 613, 1062
Hsp92II CATG 6 cut(s) 308, 584, 772, 1027, 1078, 1283
HspAI GCGC 1 cut(s) 545
KspAI GTTAAC 2 cut(s) 805, 1066
Kzo9I GATC 3 cut(s) 121, 733, 1216
LmnI GCTCC 1 cut(s) 643
Lsp1109I GCAGC 1 cut(s) 203
LweI GCATC 3 cut(s) 236, 1146, 1186
MaeI CTAG 3 cut(s) 125, 350, 575
MaeII ACGT 4 cut(s) 108, 203, 613, 1062
MaeIII GTNAC 1 cut(s) 161
MalI GATC 3 cut(s) 123, 735, 1218
MboI GATC 3 cut(s) 121, 733, 1216
MboII GAAGA 9 cut(s) 131, 164, 221, 354, 383, 482, 485, 505, 1250
MflI RGATCY 1 cut(s) 121
MhlI GDGCHC 1 cut(s) 1110
MlsI TGGCCA 1 cut(s) 532
MluCI AATT 9 cut(s) 287, 407, 437, 496, 690, 778, 786, 1034, 1210
MluNI TGGCCA 1 cut(s) 532
MlyI GAGTC 1 cut(s) 350
MmeI TCCRAC 2 cut(s) 243, 928
MnlI CCTC 7 cut(s) 207, 226, 346, 424, 856, 960, 1153
Mox20I TGGCCA 1 cut(s) 532
Mph1103I ATGCAT 3 cut(s) 6, 1229, 1254
MroXI GAANNNNTTC 1 cut(s) 932
MscI TGGCCA 1 cut(s) 532
MseI TTAA 7 cut(s) 183, 804, 863, 879, 921, 1016, 1065
Msp20I TGGCCA 1 cut(s) 532
MspI CCGG 3 cut(s) 101, 339, 654
MspR9I CCNGG 3 cut(s) 102, 340, 1266
MvaI CCWGG 1 cut(s) 1266
MvnI CGCG 1 cut(s) 809
MwoI GCNNNNNNNGC 1 cut(s) 461
NciI CCSGG 2 cut(s) 102, 340
NdeII GATC 3 cut(s) 121, 733, 1216
NlaIII CATG 6 cut(s) 308, 584, 772, 1027, 1078, 1283
NlaIV GGNNCC 2 cut(s) 645, 844
NsiI ATGCAT 3 cut(s) 6, 1229, 1254
NspI RCATGY 2 cut(s) 584, 1283
PaeI GCATGC 1 cut(s) 584
PagI TCATGA 1 cut(s) 1023
PdmI GAANNNNTTC 1 cut(s) 932
PfeI GAWTC 5 cut(s) 68, 256, 757, 856, 933
Pfl23II CGTACG 1 cut(s) 610
PflFI GACNNNGTC 1 cut(s) 1302
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
PsiI TTATAA 1 cut(s) 1209
Psp124BI GAGCTC 1 cut(s) 1110
Psp6I CCWGG 1 cut(s) 1264
PspGI CCWGG 1 cut(s) 1264
PspLI CGTACG 1 cut(s) 610
PspN4I GGNNCC 2 cut(s) 645, 844
PspPI GGNCC 1 cut(s) 336
PstI CTGCAG 1 cut(s) 193
PsuI RGATCY 1 cut(s) 121
PsyI GACNNNGTC 1 cut(s) 1302
RsaI GTAC 5 cut(s) 171, 524, 612, 634, 1190
RsaNI GTAC 5 cut(s) 170, 523, 611, 633, 1189
SacI GAGCTC 1 cut(s) 1110
SaqAI TTAA 7 cut(s) 183, 804, 863, 879, 921, 1016, 1065
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 3 cut(s) 121, 733, 1216
Sau96I GGNCC 1 cut(s) 336
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 3 cut(s) 102, 340, 1266
SduI GDGCHC 1 cut(s) 1110
SfaNI GCATC 3 cut(s) 236, 1146, 1186
SfcI CTRYAG 1 cut(s) 189
SphI GCATGC 1 cut(s) 584
Sse9I AATT 9 cut(s) 287, 407, 437, 496, 690, 778, 786, 1034, 1210
SspI AATATT 2 cut(s) 867, 1046
SspMI CTAG 3 cut(s) 125, 350, 575
SstI GAGCTC 1 cut(s) 1110
StyD4I CCNGG 3 cut(s) 100, 338, 1264
StyI CCWWGG 1 cut(s) 552
TaiI ACGT 4 cut(s) 111, 206, 616, 1065
TaqI TCGA 2 cut(s) 732, 782
TasI AATT 9 cut(s) 287, 407, 437, 496, 690, 778, 786, 1034, 1210
TatI WGTACW 3 cut(s) 169, 632, 1188
TfiI GAWTC 5 cut(s) 68, 256, 757, 856, 933
Tru1I TTAA 7 cut(s) 183, 804, 863, 879, 921, 1016, 1065
Tru9I TTAA 7 cut(s) 183, 804, 863, 879, 921, 1016, 1065
TscAI CASTG 4 cut(s) 462, 511, 724, 1095
TseI GCWGC 1 cut(s) 191
TspDTI ATGAA 5 cut(s) 64, 506, 1012, 1040, 1091
TspGWI ACGGA 1 cut(s) 540
TspRI CASTG 4 cut(s) 462, 511, 724, 1095
Tth111I GACNNNGTC 1 cut(s) 1302
XagI CCTNNNNNAGG 1 cut(s) 850
XapI RAATTY 3 cut(s) 496, 778, 1034
XceI RCATGY 2 cut(s) 584, 1283
XcmI CCANNNNNNNNNTGG 1 cut(s) 654
XmnI GAANNNNTTC 1 cut(s) 932
XspI CTAG 3 cut(s) 125, 350, 575
Zsp2I ATGCAT 3 cut(s) 6, 1229, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.