SDA1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G33810 |
| fragaria_vesca | FvH4_5g25840 |
| malus_domestica | MD08G1215600.v1.1 MD15G1400100.v1.1 |
| prunus_persica | Prupe.1G547300_v2.0.a1 |
| pyrus_communis | pycom08g18670 pycom15g35870 |
| rosa_chinensis | RchiOBHm_Chr3g0466881 RchiOBHm_Chr6g0267291 RchiOBHm_Chr7g0216321 |
| rosa_laevigata | RLG00000002582 RLG00000008029 RLG00000021151 |
| rosa_multiflora | Rmu_sc0006888.1_g000018 Rmu_sc0015060.1_g000020 Rmu_sc0043009.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00243330 Rroxscaffold_4G00297970 |
| rosa_rugosa | Rorug02G0255100 Rorug07G0050100 Rorug07G0159900 |
| rosa_samantha | Rh1AG146800 Rh1CG035900 Rh1CG138200 Rh1DG153500 Rh2AG466000 Rh2CG452600 Rh3AG132000 Rh3BG153100 Rh3BG373000 Rh4AG075700 Rh4AG132100 Rh4BG263700 Rh4DG126200 Rh4DG241900 Rh5BG107400 Rh5BG107500 Rh5CG247400 Rh5DG265500 Rh5DG495500 Rh6CG166000 Rh7BG241400 Rh7BG289600 Rh7DG263500 Rh7DG299700 |
| rosa_wichuraiana | Rw6G014070 Rw7G025290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 2 cut(s) | 71, 159 |
| AluI | AGCT | 2 cut(s) | 71, 159 |
| Ama87I | CYCGRG | 1 cut(s) | 100 |
| ApeKI | GCWGC | 3 cut(s) | 71, 138, 156 |
| AvaI | CYCGRG | 1 cut(s) | 100 |
| BbvI | GCAGC | 2 cut(s) | 58, 125 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BisI | GCNGC | 3 cut(s) | 72, 139, 157 |
| BlsI | GCNGC | 3 cut(s) | 73, 140, 158 |
| BmeT110I | CYCGRG | 1 cut(s) | 100 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 83, 115 |
| BsaJI | CCNNGG | 1 cut(s) | 6 |
| BseDI | CCNNGG | 1 cut(s) | 6 |
| BseRI | GAGGAG | 1 cut(s) | 26 |
| BseXI | GCAGC | 2 cut(s) | 58, 125 |
| BsiHKCI | CYCGRG | 1 cut(s) | 100 |
| BsoBI | CYCGRG | 1 cut(s) | 100 |
| BssECI | CCNNGG | 1 cut(s) | 6 |
| BssT1I | CCWWGG | 1 cut(s) | 6 |
| BstC8I | GCNNGC | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 71, 147, 156 |
| BstV1I | GCAGC | 2 cut(s) | 58, 125 |
| Cac8I | GCNNGC | 1 cut(s) | 21 |
| CviAII | CATG | 1 cut(s) | 61 |
| CviJI | RGCY | 5 cut(s) | 19, 65, 71, 99, 159 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 65, 71, 99, 159 |
| Eco130I | CCWWGG | 1 cut(s) | 6 |
| Eco88I | CYCGRG | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 64 |
| FaiI | YATR | 2 cut(s) | 62, 129 |
| FatI | CATG | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 139, 157 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 139, 157 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GluI | GCNGC | 3 cut(s) | 72, 139, 157 |
| Hin1II | CATG | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 1 cut(s) | 141 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 71, 147, 156 |
| Hsp92II | CATG | 1 cut(s) | 64 |
| LpnPI | CCDG | 2 cut(s) | 5, 21 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 125 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MnlI | CCTC | 7 cut(s) | 4, 9, 33, 37, 44, 85, 89 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 71, 147, 156 |
| NlaIII | CATG | 1 cut(s) | 64 |
| PaeR7I | CTCGAG | 1 cut(s) | 100 |
| PkrI | GCNGC | 3 cut(s) | 73, 140, 158 |
| PspXI | VCTCGAGB | 1 cut(s) | 100 |
| SatI | GCNGC | 3 cut(s) | 72, 139, 157 |
| SetI | ASST | 2 cut(s) | 73, 161 |
| Sfr274I | CTCGAG | 1 cut(s) | 100 |
| SgeI | CNNG | 8 cut(s) | 19, 32, 48, 73, 78, 112, 114, 147 |
| SlaI | CTCGAG | 1 cut(s) | 100 |
| SmlI | CTYRAG | 1 cut(s) | 100 |
| SmoI | CTYRAG | 1 cut(s) | 100 |
| SspMI | CTAG | 1 cut(s) | 66 |
| StyI | CCWWGG | 1 cut(s) | 6 |
| TaqI | TCGA | 1 cut(s) | 101 |
| TseI | GCWGC | 3 cut(s) | 71, 138, 156 |
| XhoI | CTCGAG | 1 cut(s) | 100 |
| XspI | CTAG | 1 cut(s) | 66 |