Rh2AG466000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
68530433 .. 68534748
4316 bp
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UTR
Exon/CDS
Intron
Rh2AG466000.1

Sequence Viewer

Length: 360 bp
ATGGGAATATCGCTACGCGAAACTACGCCGTCGATGTCGAAAGCAATGCCAAACAAAGAAGAACTGCAAAATGAACCACAAGTAGAACCCAATCAAACATCAGAAACCCGAAAGCTGTCGACTGAACTCGATGAAGTGGTGTTAGACGGTTCTGGTCCTCCCATTCGCTCTCAAAATGCCTTCAATTTTGTGATTCGCTCACTTGAAGAGTACCGATTTGCTAAGCAAGAGGATGAAGAGGTGCTGGTGCTGCATACGGATTTGGTCGAAGTCCTCAGCCGATGGAAGGGGACGATTACAAGATTAAAGTTTGGAACTACAAGATGCATAGATGTCTTTTTACTCTTCTCGGGCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

119

Amino Acids

13.56

Weight (kDa)

4.93

Isoelectric Point (pI)

54.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 119
AccII CGCG 1 cut(s) 18
AfaI GTAC 1 cut(s) 212
AfiI CCNNNNNNNGG 1 cut(s) 286
AgsI TTSAA 2 cut(s) 184, 206
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
Ama87I CYCGRG 1 cut(s) 349
ApeKI GCWGC 1 cut(s) 250
AspS9I GGNCC 1 cut(s) 155
AvaI CYCGRG 1 cut(s) 349
AvaII GGWCC 1 cut(s) 155
BbvCI CCTCAGC 1 cut(s) 275
BbvI GCAGC 1 cut(s) 237
BccI CCATC 1 cut(s) 276
BceAI ACGGC 1 cut(s) 13
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BfaI CTAG 1 cut(s) 358
BisI GCNGC 1 cut(s) 251
BlpI GCTNAGC 1 cut(s) 222
BlsI GCNGC 1 cut(s) 252
Bme18I GGWCC 1 cut(s) 155
BmeT110I CYCGRG 1 cut(s) 349
BmgT120I GGNCC 1 cut(s) 155
BmsI GCATC 1 cut(s) 314
Bpu10I CCTNAGC 1 cut(s) 275
Bpu1102I GCTNAGC 1 cut(s) 222
Bsc4I CCNNNNNNNGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 51
BseGI GGATG 1 cut(s) 238
BseLI CCNNNNNNNGG 1 cut(s) 286
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 1 cut(s) 289
BseXI GCAGC 1 cut(s) 237
Bsh1236I CGCG 1 cut(s) 18
BsiHKCI CYCGRG 1 cut(s) 349
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 1 cut(s) 286
BsmFI GGGAC 1 cut(s) 304
BsoBI CYCGRG 1 cut(s) 349
Bsp1720I GCTNAGC 1 cut(s) 222
BspCNI CTCAG 1 cut(s) 288
BspFNI CGCG 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 51
Bst4CI ACNGT 1 cut(s) 149
Bst6I CTCTTC 3 cut(s) 201, 231, 350
BstDEI CTNAG 2 cut(s) 222, 275
BstF5I GGATG 1 cut(s) 238
BstFNI CGCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 1 cut(s) 250
BstUI CGCG 1 cut(s) 18
BstV1I GCAGC 1 cut(s) 237
BtsCI GGATG 1 cut(s) 238
Cfr13I GGNCC 1 cut(s) 155
Csp6I GTAC 1 cut(s) 211
CviJI RGCY 2 cut(s) 115, 279
CviKI_1 RGCY 2 cut(s) 115, 279
CviQI GTAC 1 cut(s) 211
DdeI CTNAG 2 cut(s) 222, 275
Eam1104I CTCTTC 3 cut(s) 201, 231, 350
EarI CTCTTC 3 cut(s) 201, 231, 350
Eco47I GGWCC 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 349
EcoT22I ATGCAT 1 cut(s) 329
FaiI YATR 2 cut(s) 255, 329
FaqI GGGAC 1 cut(s) 304
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 1 cut(s) 251
FokI GGATG 1 cut(s) 245
Fsp4HI GCNGC 1 cut(s) 251
FspBI CTAG 1 cut(s) 358
GluI GCNGC 1 cut(s) 251
HincII GTYRAC 1 cut(s) 120
HindII GTYRAC 1 cut(s) 120
HinfI GANTC 1 cut(s) 193
Hpy166II GTNNAC 1 cut(s) 120
Hpy188I TCNGA 1 cut(s) 103
Hpy8I GTNNAC 1 cut(s) 120
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 2 cut(s) 190, 280
HpyCH4III ACNGT 1 cut(s) 149
HpyCH4V TGCA 3 cut(s) 67, 253, 327
HpyF10VI GCNNNNNNNGC 1 cut(s) 250
HpyF3I CTNAG 2 cut(s) 222, 275
LpnPI CCDG 2 cut(s) 138, 230
Lsp1109I GCAGC 1 cut(s) 237
LweI GCATC 1 cut(s) 314
MaeI CTAG 1 cut(s) 358
MboII GAAGA 4 cut(s) 71, 218, 248, 337
MluCI AATT 1 cut(s) 184
MnlI CCTC 4 cut(s) 168, 223, 232, 284
Mph1103I ATGCAT 1 cut(s) 329
MseI TTAA 1 cut(s) 305
MvnI CGCG 1 cut(s) 18
MwoI GCNNNNNNNGC 1 cut(s) 250
NsiI ATGCAT 1 cut(s) 329
PfeI GAWTC 1 cut(s) 193
PkrI GCNGC 1 cut(s) 252
PspPI GGNCC 1 cut(s) 155
RsaI GTAC 1 cut(s) 212
RsaNI GTAC 1 cut(s) 211
SalI GTCGAC 1 cut(s) 118
SaqAI TTAA 1 cut(s) 305
SatI GCNGC 1 cut(s) 251
Sau96I GGNCC 1 cut(s) 155
SetI ASST 2 cut(s) 117, 243
SfaNI GCATC 1 cut(s) 314
SinI GGWCC 1 cut(s) 155
Sse9I AATT 1 cut(s) 184
SspMI CTAG 1 cut(s) 358
TaaI ACNGT 1 cut(s) 149
TaqI TCGA 5 cut(s) 32, 38, 119, 129, 267
TasI AATT 1 cut(s) 184
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 1 cut(s) 305
Tru9I TTAA 1 cut(s) 305
TseI GCWGC 1 cut(s) 250
TspDTI ATGAA 3 cut(s) 87, 147, 249
TspGWI ACGGA 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 155
XmiI GTMKAC 1 cut(s) 119
XspI CTAG 1 cut(s) 358
Zsp2I ATGCAT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.