Rh4CG049400

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0002857
Physical Location & Seq
Forward (+)
9806611 .. 9845179
38569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG049400.1

Sequence Viewer

Length: 435 bp
ATGGGATCAACATTTTGGACATTGCTGAAGCCGCTAGATCGCTATGTTGCACTATTTGGTGAGTACTGTTATGATCCTTCCAAATGGAGGCCAAGCGTACCATTTGTGGAGCAACTGAAGGCTCTTCAAGAAGTTGTGGATGAAGGAAAGGTACGTTATATTGGTGTTTCCAATGAGACTTCATATGGAGTGATGGAGTTCGTACATGCTGCTAAAGTTGGAGGATTACCAAAGATTGTCAGTATCCAAAACAACGACAGCCTGCTTGTTAGAACTCATTTTGAAAGTGTACTCACAAAGCCAATCAATCTAGGCACTTCGAGCCAACATCTCATGGAATTCAAGGATGGACCTCTCCTTCTGAAGCTTCATGTCTTGCCTAAATTTGTAAATAAGCTCCTCCGCCCTTTCATCCACTACCCGCAGCTGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

144

Amino Acids

16.49

Weight (kDa)

8.99

Isoelectric Point (pI)

31.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 29 - 94 1.9e-09 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 32, 403, 422
AclWI GGATC 2 cut(s) 13, 68
AcsI RAATTY 2 cut(s) 338, 383
AcuI CTGAAG 3 cut(s) 47, 137, 383
AfaI GTAC 5 cut(s) 65, 99, 153, 204, 291
AfiI CCNNNNNNNGG 1 cut(s) 87
AgsI TTSAA 3 cut(s) 128, 284, 343
AluBI AGCT 3 cut(s) 367, 397, 427
AluI AGCT 3 cut(s) 367, 397, 427
Alw26I GTCTC 1 cut(s) 170
AlwI GGATC 2 cut(s) 13, 68
AoxI GGCC 1 cut(s) 89
ApeKI GCWGC 2 cut(s) 209, 424
ApoI RAATTY 2 cut(s) 338, 383
AspS9I GGNCC 1 cut(s) 350
AsuHPI GGTGA 1 cut(s) 71
AvaII GGWCC 1 cut(s) 350
BarI GAAGNNNNNNTAC 2 cut(s) 135, 167
BbvI GCAGC 1 cut(s) 196
BccI CCATC 2 cut(s) 187, 341
BciVI GTATCC 1 cut(s) 254
BcoDI GTCTC 1 cut(s) 170
BfaI CTAG 2 cut(s) 35, 311
BfuI GTATCC 1 cut(s) 254
BisI GCNGC 3 cut(s) 32, 210, 425
BlsI GCNGC 3 cut(s) 33, 211, 426
BmcAI AGTACT 1 cut(s) 65
Bme18I GGWCC 1 cut(s) 350
BmgT120I GGNCC 1 cut(s) 350
Bsc4I CCNNNNNNNGG 1 cut(s) 87
Bse3DI GCAATG 1 cut(s) 20
BseGI GGATG 3 cut(s) 145, 352, 411
BseLI CCNNNNNNNGG 1 cut(s) 87
BseMI GCAATG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 389
BseXI GCAGC 1 cut(s) 196
BshFI GGCC 1 cut(s) 91
BslI CCNNNNNNNGG 1 cut(s) 87
BsmAI GTCTC 1 cut(s) 170
BsnI GGCC 1 cut(s) 91
Bsp143I GATC 3 cut(s) 5, 37, 73
BspACI CCGC 3 cut(s) 32, 403, 422
BspANI GGCC 1 cut(s) 91
BspPI GGATC 2 cut(s) 13, 68
BspQI GCTCTTC 1 cut(s) 129
BsrDI GCAATG 1 cut(s) 20
BssMI GATC 3 cut(s) 5, 37, 73
Bst4CI ACNGT 1 cut(s) 68
Bst6I CTCTTC 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 263
BstF5I GGATG 3 cut(s) 145, 352, 411
BstKTI GATC 3 cut(s) 8, 40, 76
BstMAI GTCTC 1 cut(s) 170
BstMBI GATC 3 cut(s) 5, 37, 73
BstMWI GCNNNNNNNGC 2 cut(s) 31, 321
BstNSI RCATGY 1 cut(s) 209
BstV1I GCAGC 1 cut(s) 196
BsuI GTATCC 1 cut(s) 254
BsuRI GGCC 1 cut(s) 91
BtsCI GGATG 3 cut(s) 145, 352, 411
Cac8I GCNNGC 1 cut(s) 263
Cfr13I GGNCC 1 cut(s) 350
Csp6I GTAC 5 cut(s) 64, 98, 152, 203, 290
CviAII CATG 3 cut(s) 206, 334, 371
CviJI RGCY 9 cut(s) 31, 91, 122, 261, 301, 324, 367, 397, 427
CviKI_1 RGCY 9 cut(s) 31, 91, 122, 261, 301, 324, 367, 397, 427
CviQI GTAC 5 cut(s) 64, 98, 152, 203, 290
DpnI GATC 3 cut(s) 7, 39, 75
DpnII GATC 3 cut(s) 5, 37, 73
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 1 cut(s) 392
Eco47I GGWCC 1 cut(s) 350
Eco57I CTGAAG 3 cut(s) 47, 137, 383
EcoRI GAATTC 1 cut(s) 338
FaeI CATG 3 cut(s) 209, 337, 374
FaiI YATR 8 cut(s) 45, 72, 159, 184, 186, 207, 335, 372
FatI CATG 3 cut(s) 205, 333, 370
FauI CCCGC 1 cut(s) 429
FauNDI CATATG 1 cut(s) 184
Fnu4HI GCNGC 3 cut(s) 32, 210, 425
FokI GGATG 3 cut(s) 152, 359, 398
Fsp4HI GCNGC 3 cut(s) 32, 210, 425
FspBI CTAG 2 cut(s) 35, 311
GluI GCNGC 3 cut(s) 32, 210, 425
HaeIII GGCC 1 cut(s) 91
Hin1II CATG 3 cut(s) 209, 337, 374
HindIII AAGCTT 1 cut(s) 365
HphI GGTGA 1 cut(s) 71
Hpy166II GTNNAC 1 cut(s) 290
Hpy188I TCNGA 1 cut(s) 363
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 1 cut(s) 290
HpyAV CCTTC 4 cut(s) 87, 112, 137, 368
HpyCH4III ACNGT 1 cut(s) 68
HpyCH4IV ACGT 1 cut(s) 154
HpyCH4V TGCA 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 321
HpySE526I ACGT 1 cut(s) 154
Hsp92II CATG 3 cut(s) 209, 337, 374
Kzo9I GATC 3 cut(s) 5, 37, 73
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 2 cut(s) 109, 402
LpnPI CCDG 1 cut(s) 275
Lsp1109I GCAGC 1 cut(s) 196
MaeI CTAG 2 cut(s) 35, 311
MaeII ACGT 1 cut(s) 154
MalI GATC 3 cut(s) 7, 39, 75
MboI GATC 3 cut(s) 5, 37, 73
MboII GAAGA 1 cut(s) 116
MluCI AATT 2 cut(s) 338, 383
MmeI TCCRAC 1 cut(s) 199
MnlI CCTC 4 cut(s) 81, 215, 363, 410
MspA1I CMGCKG 1 cut(s) 427
MwoI GCNNNNNNNGC 2 cut(s) 31, 321
NdeI CATATG 1 cut(s) 184
NdeII GATC 3 cut(s) 5, 37, 73
NlaIII CATG 3 cut(s) 209, 337, 374
NspI RCATGY 1 cut(s) 209
PciSI GCTCTTC 1 cut(s) 129
PkrI GCNGC 3 cut(s) 33, 211, 426
PspPI GGNCC 1 cut(s) 350
PvuII CAGCTG 1 cut(s) 427
RsaI GTAC 5 cut(s) 65, 99, 153, 204, 291
RsaNI GTAC 5 cut(s) 64, 98, 152, 203, 290
SapI GCTCTTC 1 cut(s) 129
SatI GCNGC 3 cut(s) 32, 210, 425
Sau3AI GATC 3 cut(s) 5, 37, 73
Sau96I GGNCC 1 cut(s) 350
ScaI AGTACT 1 cut(s) 65
SetI ASST 6 cut(s) 153, 157, 355, 369, 399, 429
SinI GGWCC 1 cut(s) 350
Sse9I AATT 2 cut(s) 338, 383
SsiI CCGC 3 cut(s) 32, 403, 422
SspMI CTAG 2 cut(s) 35, 311
TaaI ACNGT 1 cut(s) 68
TaiI ACGT 1 cut(s) 157
TaqI TCGA 1 cut(s) 320
TasI AATT 2 cut(s) 338, 383
TatI WGTACW 2 cut(s) 63, 289
TauI GCSGC 1 cut(s) 34
TseI GCWGC 2 cut(s) 209, 424
TspDTI ATGAA 4 cut(s) 156, 171, 359, 400
VpaK11BI GGWCC 1 cut(s) 350
XapI RAATTY 2 cut(s) 338, 383
XceI RCATGY 1 cut(s) 209
XspI CTAG 2 cut(s) 35, 311
ZrmI AGTACT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.