Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0001224

Physical Location & Seq

Genomic Coordinates Reverse (-)

28550904 .. 28553210

Gene Structure 2307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG172800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGTCTTCATCTTCACCAAAAGCTTTCCAATGGTTAAGCCTTGTGGGCATCATATGGCTTCAATCCATAAACGGAACGAACACCACCTTCCCTGCTTACTCATCCCAACTCAAGAACACTCTCTTCCTCTCCCAACTACAAATCAACAATCTCGTCTTCGCCTCCGACGCTGGGAAACTCTTTGGTTGGTTTTCCGGCATTGCTGCTATTTACCTTCCCCTCTGGCTAGTCCTCATTATCGGTTCACTTCTCGGGTTGATTGGCTACGGTGTCCAATTTCTATTCGTAACTAACCAAATCTCATCTCCAGCATATTGGCAAATATTCTTGCTCACCATGGTGGCCGGAAATAGTGTCTGTTGGATCAACACCGTTTGCTATGTTGTTTGCATTCGAAACTTTCCGTTTCACCAACAGGTTGCTGTGGGACTAACAACAAGTTACCAGGGATTGAGTGCAAAAATCTACACAGATATCGTTGGTGCTGCTTTTTCTTCTTCACCTCATAAGAGAGCCAAGGCCTATCTTCTTCTAAACTCTCTCCTGCCTTTACTAGTCTGTGTTGTAGTGGCACCATTTGTGAGAGACATTGATGTGGGAAGAGGGGAGCCCAGAAATATGGCAGCGGGGTTCAAATTAATATTTGTTGTAACAATTGCCACCGGAATCTATGCCGTGATCACCAGTTTAGAATCAATGTCGTCTATCCACTTATCGCCATTGCAGGGTGTGATAGGTACCGTATTGTTCCTACTGATCCCCATGGTCATCCCAATTGTGGAAAAAATCGGAGAAAAATTATCAAGAAGGTGGAGCCTAGACAGAGAGAACAGAGTGCATGACTTCACCATAGAAGATCAGAAAGGCCTTGAGAGCATAGAGAGTGGTGTAGTGAAAGAGGAAGAAGAAGAGGAACATAGTACAGTGCAGGTTCATAATGAGGTTGGTGAAGTTCAGGTTCATCATGGGATTGGTGTTAGAGAGGAGATTGGAGTGAAGTTGATGGTGAAAAGGATAGATTTCTGGTTATATTTCCTAGTGTATATTTTCAGTGCAACAATTGGGCTTGTGTTCTTGAACACCTTGGGACAGATAGCAGAGTCAAGAGGCTCATCTAAGACTTCTTCTCTGGTTTCTTTATCTTCTTCATTTGGGTTCTTTGGCCGTCTCATGACTTCACTTCTGGACTATTTCTTCTCAAGAAAGTATATGATTTCAAGGCCTGCATTCCTAGTGACATTAGCGGCACCAATAGCAGGAGTTTTCTTCTTGCTTCTCAACCCAGCTAACGTCTCCCTTATCATCAGTACCGCCATTATAGGAGTGTGCACTGGAGCAATTACTTCTATTGCAGTGTCCATAACCACAGAGCTATTCGGGACCAAGAATTTCTCAATAAATCACAATGTGGTGGTTGTGAATATCTCAATCGGGTCGTTTCTTTTTGGCTACTCATCTGCTCTTATTTATCGGAAGGAAGGAAATGAAGATGGTAGCTGCTTGGGAATGGCTTGTTATAGGAGCACCTTCATTATTTGGGGTAGTCTTTGTACGTTAGGGACTACTCTAGCTTTTGTGCTTTATGCAAGAACAAGAAAGTTTTACTCCAAAATATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nodulin-like

Protein Analysis

539

Amino Acids

59.24

Weight (kDa)

8.77

Isoelectric Point (pI)

40.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	10 - 259	2.5e-74	Nodulin-like
NFD4_C	PF23262	324 - 536	4.3e-101	NFD4, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30300
fragaria_vesca	FvH4_2g11110 FvH4_3g40010
malus_domestica	MD03G1058400.v1.1 MD11G1060600.v1.1
pyrus_communis	pycom03g04680 pycom11g05010
rosa_chinensis	RchiOBHm_Chr5g0062631 RchiOBHm_Chr5g0062641 RchiOBHm_Chr5g0072091 RchiOBHm_Chr5g0072101 RchiOBHm_Chr5g0072121 RchiOBHm_Chr5g0072131 RchiOBHm_Chr6g0269351 RchiOBHm_Chr6g0269361
rosa_laevigata	RLG00000013855 RLG00000013856 RLG00000036273 RLG00000036279
rosa_multiflora	Rmu_sc0001152.1_g000010 Rmu_sc0001152.1_g000038 Rmu_sc0003673.1_g000004 Rmu_sc0003673.1_g000010 Rmu_sc0003891.1_g000004 Rmu_sc0010048.1_g000001 Rmu_ssc0000291.1_g000009
rosa_roxburghii	Rroxscaffold_1G00009070 Rroxscaffold_1G00009110 Rroxscaffold_7G00198780 Rroxscaffold_7G00198800
rosa_rugosa	Rorug05G0416400 Rorug05G0416500 Rorug06G0047300
rosa_samantha	Rh5AG411500 Rh5AG472500 Rh5AG472700 Rh5BG425200 Rh5BG492100 Rh5BG492200 Rh5CG449100 Rh5CG515900 Rh5CG516000 Rh5DG439300 Rh5DG504400 Rh5DG504600 Rh6AG167700 Rh6BG172800 Rh6BG173000 Rh6CG166900 Rh6CG167100 Rh6DG158700 Rh6DG158900
rosa_wichuraiana	Rw5G038680 Rw5G038690 Rw5G043890 Rw5G043900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	919
Acc65I	GGTACC	1 cut(s)	737
AccB1I	GGYRCC	3 cut(s)	571, 737, 1246
AciI	CCGC	3 cut(s)	626, 1244, 1311
AclWI	GGATC	2 cut(s)	371, 751
AcoI	YGGCCR	2 cut(s)	342, 1162
AcsI	RAATTY	1 cut(s)	1387
AdeI	CACNNNGTG	1 cut(s)	1408
AfaI	GTAC	4 cut(s)	739, 922, 1309, 1552
AfiI	CCNNNNNNNGG	4 cut(s)	171, 725, 778, 1256
AgsI	TTSAA	4 cut(s)	62, 634, 1078, 1218
AhlI	ACTAGT	1 cut(s)	553
AjnI	CCWGG	1 cut(s)	444
AleI	CACNNNNGTG	1 cut(s)	338
AluBI	AGCT	5 cut(s)	23, 1286, 1372, 1497, 1571
AluI	AGCT	5 cut(s)	23, 1286, 1372, 1497, 1571
Alw21I	GWGCWC	2 cut(s)	1331, 1526
Alw26I	GTCTC	3 cut(s)	579, 1172, 1297
Alw44I	GTGCAC	1 cut(s)	1327
AlwI	GGATC	2 cut(s)	371, 751
Ama87I	CYCGRG	1 cut(s)	251
AoxI	GGCC	5 cut(s)	342, 519, 865, 1162, 1220
ApaLI	GTGCAC	1 cut(s)	1327
ApeKI	GCWGC	4 cut(s)	203, 485, 623, 1497
ApoI	RAATTY	1 cut(s)	1387
AseI	ATTAAT	1 cut(s)	638
Asp718I	GGTACC	1 cut(s)	737
AspS9I	GGNCC	1 cut(s)	1380
AsuHPI	GGTGA	8 cut(s)	6, 325, 401, 492, 673, 838, 959, 1018
AsuII	TTCGAA	1 cut(s)	394
AvaI	CYCGRG	1 cut(s)	251
AvaII	GGWCC	1 cut(s)	1380
BaeGI	GKGCMC	1 cut(s)	1331
BanI	GGYRCC	3 cut(s)	571, 737, 1246
BanII	GRGCYC	1 cut(s)	612
BbsI	GAAGAC	1 cut(s)	148
Bbv12I	GWGCWC	2 cut(s)	1331, 1526
BbvI	GCAGC	4 cut(s)	190, 472, 635, 1484
BccI	CCATC	2 cut(s)	997, 1484
BceAI	ACGGC	2 cut(s)	659, 1149
BciT130I	CCWGG	1 cut(s)	446
BclI	TGATCA	1 cut(s)	678
BcoDI	GTCTC	3 cut(s)	579, 1172, 1297
BcuI	ACTAGT	1 cut(s)	553
BfaI	CTAG	6 cut(s)	227, 554, 818, 1037, 1232, 1568
BfuAI	ACCTGC	1 cut(s)	919
BglI	GCCNNNNNGGC	1 cut(s)	45
BisI	GCNGC	5 cut(s)	204, 486, 624, 1245, 1498
BlsI	GCNGC	5 cut(s)	205, 487, 625, 1246, 1499
Bme1390I	CCNGG	1 cut(s)	446
Bme18I	GGWCC	1 cut(s)	1380
BmeT110I	CYCGRG	1 cut(s)	251
BmgT120I	GGNCC	1 cut(s)	1380
BmiI	GGNNCC	6 cut(s)	573, 609, 739, 815, 1248, 1381
BmrFI	CCNGG	1 cut(s)	446
BmsI	GCATC	1 cut(s)	57
BpiI	GAAGAC	1 cut(s)	148
BpmI	CTGGAG	2 cut(s)	291, 1353
Bpu14I	TTCGAA	1 cut(s)	394
BpuEI	CTTGAG	3 cut(s)	95, 890, 1183
BsaJI	CCNNGG	5 cut(s)	336, 445, 516, 762, 1083
BsaWI	WCCGGW	1 cut(s)	662
Bsc4I	CCNNNNNNNGG	4 cut(s)	171, 725, 778, 1256
Bse1I	ACTGG	2 cut(s)	684, 1336
Bse3DI	GCAATG	2 cut(s)	198, 719
BseBI	CCWGG	1 cut(s)	446
BseDI	CCNNGG	5 cut(s)	336, 445, 516, 762, 1083
BseGI	GGATG	2 cut(s)	101, 768
BseLI	CCNNNNNNNGG	4 cut(s)	171, 725, 778, 1256
BseMI	GCAATG	2 cut(s)	198, 719
BseNI	ACTGG	2 cut(s)	684, 1336
BseRI	GAGGAG	1 cut(s)	998
BseSI	GKGCMC	1 cut(s)	1331
BseXI	GCAGC	4 cut(s)	190, 472, 635, 1484
BseYI	CCCAGC	2 cut(s)	170, 1282
BsgI	GTGCAG	1 cut(s)	947
BshFI	GGCC	5 cut(s)	344, 521, 867, 1164, 1222
BshNI	GGYRCC	3 cut(s)	571, 737, 1246
BsiHKAI	GWGCWC	2 cut(s)	1331, 1526
BsiHKCI	CYCGRG	1 cut(s)	251
BsiSI	CCGG	3 cut(s)	195, 345, 663
BslFI	GGGAC	4 cut(s)	441, 1101, 1393, 1573
BslI	CCNNNNNNNGG	4 cut(s)	171, 725, 778, 1256
BsmAI	GTCTC	3 cut(s)	579, 1172, 1297
BsmBI	CGTCTC	2 cut(s)	1172, 1297
BsmFI	GGGAC	4 cut(s)	441, 1101, 1393, 1573
BsmI	GAATGC	2 cut(s)	390, 1226
BsnI	GGCC	5 cut(s)	344, 521, 867, 1164, 1222
BsoBI	CYCGRG	1 cut(s)	251
Bsp119I	TTCGAA	1 cut(s)	394
Bsp1286I	GDGCHC	3 cut(s)	612, 1331, 1526
Bsp143I	GATC	4 cut(s)	363, 678, 756, 856
Bsp19I	CCATGG	2 cut(s)	336, 762
BspACI	CCGC	3 cut(s)	626, 1244, 1311
BspANI	GGCC	5 cut(s)	344, 521, 867, 1164, 1222
BspHI	TCATGA	1 cut(s)	1170
BspLI	GGNNCC	6 cut(s)	573, 609, 739, 815, 1248, 1381
BspMI	ACCTGC	1 cut(s)	919
BspPI	GGATC	2 cut(s)	371, 751
BspT104I	TTCGAA	1 cut(s)	394
BspT107I	GGYRCC	3 cut(s)	571, 737, 1246
BsrDI	GCAATG	2 cut(s)	198, 719
BsrI	ACTGG	2 cut(s)	684, 1336
BssECI	CCNNGG	5 cut(s)	336, 445, 516, 762, 1083
BssMI	GATC	4 cut(s)	363, 678, 756, 856
BssT1I	CCWWGG	4 cut(s)	336, 516, 762, 1083
Bst2UI	CCWGG	1 cut(s)	446
Bst4CI	ACNGT	4 cut(s)	269, 373, 742, 925
Bst6I	CTCTTC	3 cut(s)	128, 595, 903
BstBI	TTCGAA	1 cut(s)	394
BstC8I	GCNNGC	1 cut(s)	1224
BstDEI	CTNAG	1 cut(s)	1116
BstDSI	CCRYGG	2 cut(s)	336, 762
BstF5I	GGATG	2 cut(s)	101, 768
BstKTI	GATC	4 cut(s)	366, 681, 759, 859
BstMAI	GTCTC	3 cut(s)	579, 1172, 1297
BstMBI	GATC	4 cut(s)	363, 678, 756, 856
BstMWI	GCNNNNNNNGC	4 cut(s)	45, 167, 873, 1253
BstNI	CCWGG	1 cut(s)	446
BstSCI	CCNGG	1 cut(s)	444
BstSLI	GKGCMC	1 cut(s)	1331
BstV1I	GCAGC	4 cut(s)	190, 472, 635, 1484
BstV2I	GAAGAC	1 cut(s)	148
BstXI	CCANNNNNNTGG	2 cut(s)	315, 619
BsuRI	GGCC	5 cut(s)	344, 521, 867, 1164, 1222
BtgI	CCRYGG	2 cut(s)	336, 762
BtsCI	GGATG	2 cut(s)	101, 768
BtsI	GCAGTG	1 cut(s)	1359
BtsIMutI	CAGTG	4 cut(s)	930, 1057, 1329, 1359
BveI	ACCTGC	1 cut(s)	919
Cac8I	GCNNGC	1 cut(s)	1224
CciI	TCATGA	1 cut(s)	1170
Cfr13I	GGNCC	1 cut(s)	1380
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	4 cut(s)	738, 921, 1308, 1551
CviAII	CATG	5 cut(s)	337, 763, 839, 965, 1171
CviQI	GTAC	4 cut(s)	738, 921, 1308, 1551
DdeI	CTNAG	1 cut(s)	1116
DpnI	GATC	4 cut(s)	365, 680, 758, 858
DpnII	GATC	4 cut(s)	363, 678, 756, 856
DraIII	CACNNNGTG	1 cut(s)	1408
EaeI	YGGCCR	2 cut(s)	342, 1162
Eam1104I	CTCTTC	3 cut(s)	128, 595, 903
EarI	CTCTTC	3 cut(s)	128, 595, 903
Eco130I	CCWWGG	4 cut(s)	336, 516, 762, 1083
Eco147I	AGGCCT	3 cut(s)	521, 867, 1222
Eco24I	GRGCYC	1 cut(s)	612
Eco32I	GATATC	1 cut(s)	475
Eco47I	GGWCC	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	251
EcoRII	CCWGG	1 cut(s)	444
EcoRV	GATATC	1 cut(s)	475
EcoT14I	CCWWGG	4 cut(s)	336, 516, 762, 1083
EcoT38I	GRGCYC	1 cut(s)	612
ErhI	CCWWGG	4 cut(s)	336, 516, 762, 1083
Esp3I	CGTCTC	2 cut(s)	1172, 1297
FaeI	CATG	5 cut(s)	340, 766, 842, 968, 1174
FaqI	GGGAC	4 cut(s)	441, 1101, 1393, 1573
FatI	CATG	5 cut(s)	336, 762, 838, 964, 1170
FauI	CCCGC	1 cut(s)	619
FauNDI	CATATG	1 cut(s)	53
FbaI	TGATCA	1 cut(s)	678
Fnu4HI	GCNGC	5 cut(s)	204, 486, 624, 1245, 1498
FokI	GGATG	2 cut(s)	88, 755
FriOI	GRGCYC	1 cut(s)	612
Fsp4HI	GCNGC	5 cut(s)	204, 486, 624, 1245, 1498
FspBI	CTAG	6 cut(s)	227, 554, 818, 1037, 1232, 1568
GluI	GCNGC	5 cut(s)	204, 486, 624, 1245, 1498
GsaI	CCCAGC	2 cut(s)	174, 1286
GsuI	CTGGAG	2 cut(s)	291, 1353
HaeIII	GGCC	5 cut(s)	344, 521, 867, 1164, 1222
HapII	CCGG	3 cut(s)	195, 345, 663
HgaI	GACGC	1 cut(s)	176
Hin1II	CATG	5 cut(s)	340, 766, 842, 968, 1174
HindIII	AAGCTT	1 cut(s)	21
HinfI	GANTC	3 cut(s)	666, 692, 1100
HpaII	CCGG	3 cut(s)	195, 345, 663
HphI	GGTGA	8 cut(s)	6, 325, 401, 492, 673, 838, 959, 1018
Hpy166II	GTNNAC	2 cut(s)	245, 1329
Hpy188I	TCNGA	4 cut(s)	166, 791, 861, 1473
Hpy188III	TCNNGA	8 cut(s)	112, 804, 1075, 1104, 1171, 1184, 1200, 1378
Hpy8I	GTNNAC	2 cut(s)	245, 1329
Hpy99I	CGWCG	1 cut(s)	170
HpyAV	CCTTC	6 cut(s)	97, 224, 801, 1468, 1472, 1537
HpyCH4III	ACNGT	4 cut(s)	269, 373, 742, 925
HpyCH4IV	ACGT	2 cut(s)	1290, 1553
HpyF10VI	GCNNNNNNNGC	4 cut(s)	45, 167, 873, 1253
HpyF3I	CTNAG	1 cut(s)	1116
HpySE526I	ACGT	2 cut(s)	1290, 1553
Hsp92II	CATG	5 cut(s)	340, 766, 842, 968, 1174
KpnI	GGTACC	1 cut(s)	741
Ksp22I	TGATCA	1 cut(s)	678
Kzo9I	GATC	4 cut(s)	363, 678, 756, 856
LmnI	GCTCC	4 cut(s)	607, 813, 1334, 1521
Lsp1109I	GCAGC	4 cut(s)	190, 472, 635, 1484
LweI	GCATC	1 cut(s)	57
MaeI	CTAG	6 cut(s)	227, 554, 818, 1037, 1232, 1568
MaeII	ACGT	2 cut(s)	1290, 1553
MaeIII	GTNAC	4 cut(s)	286, 440, 649, 1234
MalI	GATC	4 cut(s)	365, 680, 758, 858
MboI	GATC	4 cut(s)	363, 678, 756, 856
MfeI	CAATTG	3 cut(s)	654, 774, 1059
MhlI	GDGCHC	3 cut(s)	612, 1331, 1526
MluCI	AATT	8 cut(s)	275, 635, 654, 774, 797, 1059, 1338, 1387
MlyI	GAGTC	1 cut(s)	1109
MmeI	TCCRAC	2 cut(s)	189, 341
MseI	TTAA	2 cut(s)	35, 638
MslI	CAYNNNNRTG	2 cut(s)	338, 593
MspA1I	CMGCKG	1 cut(s)	626
MspI	CCGG	3 cut(s)	195, 345, 663
MspR9I	CCNGG	1 cut(s)	446
MunI	CAATTG	3 cut(s)	654, 774, 1059
Mva1269I	GAATGC	2 cut(s)	390, 1226
MvaI	CCWGG	1 cut(s)	446
MwoI	GCNNNNNNNGC	4 cut(s)	45, 167, 873, 1253
NcoI	CCATGG	2 cut(s)	336, 762
NdeI	CATATG	1 cut(s)	53
NdeII	GATC	4 cut(s)	363, 678, 756, 856
NlaIII	CATG	5 cut(s)	340, 766, 842, 968, 1174
NlaIV	GGNNCC	6 cut(s)	573, 609, 739, 815, 1248, 1381
NmuCI	GTSAC	1 cut(s)	1234
NspV	TTCGAA	1 cut(s)	394
OliI	CACNNNNGTG	1 cut(s)	338
PagI	TCATGA	1 cut(s)	1170
PceI	AGGCCT	3 cut(s)	521, 867, 1222
PctI	GAATGC	2 cut(s)	390, 1226
PfeI	GAWTC	2 cut(s)	666, 692
PkrI	GCNGC	5 cut(s)	205, 487, 625, 1246, 1499
PleI	GAGTC	1 cut(s)	1108
PpsI	GAGTC	1 cut(s)	1108
PshBI	ATTAAT	1 cut(s)	638
Psp6I	CCWGG	1 cut(s)	444
PspFI	CCCAGC	2 cut(s)	170, 1282
PspGI	CCWGG	1 cut(s)	444
PspN4I	GGNNCC	6 cut(s)	573, 609, 739, 815, 1248, 1381
PspPI	GGNCC	1 cut(s)	1380
RsaI	GTAC	4 cut(s)	739, 922, 1309, 1552
RsaNI	GTAC	4 cut(s)	738, 921, 1308, 1551
RseI	CAYNNNNRTG	2 cut(s)	338, 593
SaqAI	TTAA	2 cut(s)	35, 638
SatI	GCNGC	5 cut(s)	204, 486, 624, 1245, 1498
Sau3AI	GATC	4 cut(s)	363, 678, 756, 856
Sau96I	GGNCC	1 cut(s)	1380
SchI	GAGTC	1 cut(s)	1109
ScrFI	CCNGG	1 cut(s)	446
SduI	GDGCHC	3 cut(s)	612, 1331, 1526
SfaNI	GCATC	1 cut(s)	57
SfuI	TTCGAA	1 cut(s)	394
SinI	GGWCC	1 cut(s)	1380
SmiMI	CAYNNNNRTG	2 cut(s)	338, 593
SmlI	CTYRAG	3 cut(s)	110, 869, 1198
SmoI	CTYRAG	3 cut(s)	110, 869, 1198
SpeI	ACTAGT	1 cut(s)	553
Sse9I	AATT	8 cut(s)	275, 635, 654, 774, 797, 1059, 1338, 1387
SseBI	AGGCCT	3 cut(s)	521, 867, 1222
SsiI	CCGC	3 cut(s)	626, 1244, 1311
SspI	AATATT	2 cut(s)	324, 642
SspMI	CTAG	6 cut(s)	227, 554, 818, 1037, 1232, 1568
StuI	AGGCCT	3 cut(s)	521, 867, 1222
StyD4I	CCNGG	1 cut(s)	444
StyI	CCWWGG	4 cut(s)	336, 516, 762, 1083
TaaI	ACNGT	4 cut(s)	269, 373, 742, 925
TaiI	ACGT	2 cut(s)	1293, 1556
TaqI	TCGA	1 cut(s)	394
TasI	AATT	8 cut(s)	275, 635, 654, 774, 797, 1059, 1338, 1387
TatI	WGTACW	1 cut(s)	920
TauI	GCSGC	1 cut(s)	1247
TfiI	GAWTC	2 cut(s)	666, 692
Tru1I	TTAA	2 cut(s)	35, 638
Tru9I	TTAA	2 cut(s)	35, 638
TscAI	CASTG	4 cut(s)	930, 1057, 1336, 1359
TseFI	GTSAC	1 cut(s)	1234
TseI	GCWGC	4 cut(s)	203, 485, 623, 1497
Tsp45I	GTSAC	1 cut(s)	1234
TspDTI	ATGAA	5 cut(s)	923, 950, 1137, 1500, 1519
TspGWI	ACGGA	2 cut(s)	87, 393
TspRI	CASTG	4 cut(s)	930, 1057, 1336, 1359
VneI	GTGCAC	1 cut(s)	1327
VpaK11BI	GGWCC	1 cut(s)	1380
VspI	ATTAAT	1 cut(s)	638
XapI	RAATTY	1 cut(s)	1387
XspI	CTAG	6 cut(s)	227, 554, 818, 1037, 1232, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.