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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0270511 |
| rosa_laevigata | RLG00000002092 RLG00000013784 |
| rosa_multiflora | Rmu_sc0000317.1_g000005 Rmu_sc0000361.1_g000005 Rmu_sc0000894.1_g000064 Rmu_sc0002045.1_g000027 Rmu_sc0002798.1_g000001 Rmu_sc0003179.1_g000026 Rmu_sc0005712.1_g000017 Rmu_sc0006198.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00068960 Rroxscaffold_2G00129070 Rroxscaffold_4G00309340 Rroxscaffold_7G00162700 |
| rosa_samantha | Rh2AG311400 Rh2AG353700 Rh2BG394400 Rh2DG335700 Rh3BG122200 Rh3BG264900 Rh4BG133000 Rh6AG174200 Rh6AG195800 Rh6CG151600 Rh6CG200500 Rh6CG200600 Rh6CG200700 Rh6DG191600 Rh7AG367700 Rh7CG386000 |
| rosa_wichuraiana | Rw2G031700 Rw6G016580 Rw6G017120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 536 |
| AcvI | CACGTG | 1 cut(s) | 382 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 104, 295 |
| AgsI | TTSAA | 3 cut(s) | 211, 458, 586 |
| AluBI | AGCT | 4 cut(s) | 196, 334, 422, 454 |
| AluI | AGCT | 4 cut(s) | 196, 334, 422, 454 |
| Alw21I | GWGCWC | 1 cut(s) | 198 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 86, 118, 498, 530 |
| AspS9I | GGNCC | 2 cut(s) | 94, 398 |
| AvaII | GGWCC | 2 cut(s) | 94, 398 |
| BanII | GRGCYC | 1 cut(s) | 198 |
| BbrPI | CACGTG | 1 cut(s) | 382 |
| Bbv12I | GWGCWC | 1 cut(s) | 198 |
| BccI | CCATC | 3 cut(s) | 119, 312, 525 |
| BciVI | GTATCC | 1 cut(s) | 81 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BfuI | GTATCC | 1 cut(s) | 81 |
| Bme18I | GGWCC | 2 cut(s) | 94, 398 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 398 |
| BmiI | GGNNCC | 2 cut(s) | 96, 399 |
| BmsI | GCATC | 1 cut(s) | 98 |
| BsaAI | YACGTR | 1 cut(s) | 382 |
| BsaJI | CCNNGG | 1 cut(s) | 56 |
| BsaWI | WCCGGW | 1 cut(s) | 91 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 148, 178 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 104, 295 |
| BseDI | CCNNGG | 1 cut(s) | 56 |
| BseGI | GGATG | 3 cut(s) | 113, 304, 536 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 104, 295 |
| BseMII | CTCAG | 1 cut(s) | 326 |
| BsgI | GTGCAG | 1 cut(s) | 552 |
| BsiHKAI | GWGCWC | 1 cut(s) | 198 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BslFI | GGGAC | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 104, 295 |
| BsmFI | GGGAC | 1 cut(s) | 142 |
| Bsp1286I | GDGCHC | 1 cut(s) | 198 |
| Bsp143I | GATC | 2 cut(s) | 275, 376 |
| BspCNI | CTCAG | 1 cut(s) | 327 |
| BspLI | GGNNCC | 2 cut(s) | 96, 399 |
| BssECI | CCNNGG | 1 cut(s) | 56 |
| BssMI | GATC | 2 cut(s) | 275, 376 |
| BssT1I | CCWWGG | 1 cut(s) | 56 |
| BstBAI | YACGTR | 1 cut(s) | 382 |
| BstDEI | CTNAG | 1 cut(s) | 335 |
| BstF5I | GGATG | 3 cut(s) | 113, 304, 536 |
| BstKTI | GATC | 2 cut(s) | 278, 379 |
| BstMBI | GATC | 2 cut(s) | 275, 376 |
| BstNSI | RCATGY | 1 cut(s) | 317 |
| BsuI | GTATCC | 1 cut(s) | 81 |
| BtgZI | GCGATG | 1 cut(s) | 540 |
| BtsCI | GGATG | 3 cut(s) | 113, 304, 536 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 398 |
| CseI | GACGC | 1 cut(s) | 227 |
| CviAII | CATG | 2 cut(s) | 229, 314 |
| CviJI | RGCY | 7 cut(s) | 11, 48, 196, 334, 422, 454, 600 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 48, 196, 334, 422, 454, 600 |
| DdeI | CTNAG | 1 cut(s) | 335 |
| DpnI | GATC | 2 cut(s) | 277, 378 |
| DpnII | GATC | 2 cut(s) | 275, 376 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 1 cut(s) | 56 |
| Eco24I | GRGCYC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 2 cut(s) | 94, 398 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco72I | CACGTG | 1 cut(s) | 382 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 1 cut(s) | 398 |
| EcoT14I | CCWWGG | 1 cut(s) | 56 |
| EcoT38I | GRGCYC | 1 cut(s) | 198 |
| ErhI | CCWWGG | 1 cut(s) | 56 |
| FaeI | CATG | 2 cut(s) | 232, 317 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 385, 417 |
| FaqI | GGGAC | 1 cut(s) | 142 |
| FatI | CATG | 2 cut(s) | 228, 313 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| FblI | GTMKAC | 1 cut(s) | 536 |
| FokI | GGATG | 3 cut(s) | 120, 291, 543 |
| FriOI | GRGCYC | 1 cut(s) | 198 |
| HapII | CCGG | 1 cut(s) | 92 |
| HgaI | GACGC | 1 cut(s) | 227 |
| Hin1II | CATG | 2 cut(s) | 232, 317 |
| HincII | GTYRAC | 1 cut(s) | 537 |
| HindII | GTYRAC | 1 cut(s) | 537 |
| HindIII | AAGCTT | 1 cut(s) | 452 |
| HinfI | GANTC | 2 cut(s) | 271, 430 |
| HpaII | CCGG | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 1 cut(s) | 537 |
| Hpy188I | TCNGA | 1 cut(s) | 107 |
| Hpy188III | TCNNGA | 2 cut(s) | 407, 434 |
| Hpy8I | GTNNAC | 1 cut(s) | 537 |
| Hpy99I | CGWCG | 1 cut(s) | 221 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4IV | ACGT | 1 cut(s) | 381 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 169, 313, 569 |
| HpyF3I | CTNAG | 1 cut(s) | 335 |
| HpySE526I | ACGT | 1 cut(s) | 381 |
| Hsp92II | CATG | 2 cut(s) | 232, 317 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| Kzo9I | GATC | 2 cut(s) | 275, 376 |
| LmnI | GCTCC | 1 cut(s) | 116 |
| LpnPI | CCDG | 4 cut(s) | 105, 321, 447, 480 |
| LweI | GCATC | 1 cut(s) | 98 |
| MaeII | ACGT | 1 cut(s) | 381 |
| MaeIII | GTNAC | 1 cut(s) | 407 |
| MalI | GATC | 2 cut(s) | 277, 378 |
| MboI | GATC | 2 cut(s) | 275, 376 |
| MboII | GAAGA | 1 cut(s) | 269 |
| MhlI | GDGCHC | 1 cut(s) | 198 |
| MluCI | AATT | 4 cut(s) | 5, 199, 211, 483 |
| MmeI | TCCRAC | 1 cut(s) | 134 |
| MnlI | CCTC | 4 cut(s) | 54, 109, 175, 299 |
| MseI | TTAA | 2 cut(s) | 486, 579 |
| MslI | CAYNNNNRTG | 1 cut(s) | 106 |
| MspA1I | CMGCKG | 1 cut(s) | 334 |
| MspI | CCGG | 1 cut(s) | 92 |
| NdeII | GATC | 2 cut(s) | 275, 376 |
| NlaIII | CATG | 2 cut(s) | 232, 317 |
| NlaIV | GGNNCC | 2 cut(s) | 96, 399 |
| NmuCI | GTSAC | 1 cut(s) | 407 |
| NspI | RCATGY | 1 cut(s) | 317 |
| PfeI | GAWTC | 2 cut(s) | 271, 430 |
| PmaCI | CACGTG | 1 cut(s) | 382 |
| PmlI | CACGTG | 1 cut(s) | 382 |
| Ppu21I | YACGTR | 1 cut(s) | 382 |
| PpuMI | RGGWCCY | 1 cut(s) | 398 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp5II | RGGWCCY | 1 cut(s) | 398 |
| PspCI | CACGTG | 1 cut(s) | 382 |
| PspN4I | GGNNCC | 2 cut(s) | 96, 399 |
| PspPI | GGNCC | 2 cut(s) | 94, 398 |
| PspPPI | RGGWCCY | 1 cut(s) | 398 |
| PvuII | CAGCTG | 1 cut(s) | 334 |
| RseI | CAYNNNNRTG | 1 cut(s) | 106 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SalI | GTCGAC | 1 cut(s) | 535 |
| SaqAI | TTAA | 2 cut(s) | 486, 579 |
| Sau3AI | GATC | 2 cut(s) | 275, 376 |
| Sau96I | GGNCC | 2 cut(s) | 94, 398 |
| SduI | GDGCHC | 1 cut(s) | 198 |
| SetI | ASST | 8 cut(s) | 54, 65, 198, 291, 336, 384, 424, 456 |
| SfaNI | GCATC | 1 cut(s) | 98 |
| SinI | GGWCC | 2 cut(s) | 94, 398 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 106 |
| Sse9I | AATT | 4 cut(s) | 5, 199, 211, 483 |
| SspI | AATATT | 1 cut(s) | 137 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyI | CCWWGG | 1 cut(s) | 56 |
| TaiI | ACGT | 1 cut(s) | 384 |
| TaqI | TCGA | 3 cut(s) | 216, 274, 536 |
| TaqII | GACCGA | 1 cut(s) | 426 |
| TasI | AATT | 4 cut(s) | 5, 199, 211, 483 |
| TfiI | GAWTC | 2 cut(s) | 271, 430 |
| Tru1I | TTAA | 2 cut(s) | 486, 579 |
| Tru9I | TTAA | 2 cut(s) | 486, 579 |
| TseFI | GTSAC | 1 cut(s) | 407 |
| Tsp45I | GTSAC | 1 cut(s) | 407 |
| TspDTI | ATGAA | 2 cut(s) | 17, 464 |
| TspGWI | ACGGA | 2 cut(s) | 146, 311 |
| VpaK11BI | GGWCC | 2 cut(s) | 94, 398 |
| XceI | RCATGY | 1 cut(s) | 317 |
| XmiI | GTMKAC | 1 cut(s) | 536 |