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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0270511 |
| rosa_laevigata | RLG00000002092 RLG00000013784 |
| rosa_multiflora | Rmu_sc0000317.1_g000005 Rmu_sc0000361.1_g000005 Rmu_sc0000894.1_g000064 Rmu_sc0002045.1_g000027 Rmu_sc0002798.1_g000001 Rmu_sc0003179.1_g000026 Rmu_sc0005712.1_g000017 Rmu_sc0006198.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00068960 Rroxscaffold_2G00129070 Rroxscaffold_4G00309340 Rroxscaffold_7G00162700 |
| rosa_samantha | Rh2AG311400 Rh2AG353700 Rh2BG394400 Rh2DG335700 Rh3BG122200 Rh3BG264900 Rh4BG133000 Rh6AG174200 Rh6AG195800 Rh6CG151600 Rh6CG200500 Rh6CG200600 Rh6CG200700 Rh6DG191600 Rh7AG367700 Rh7CG386000 |
| rosa_wichuraiana | Rw2G031700 Rw6G016580 Rw6G017120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 237 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 317 |
| AatII | GACGTC | 1 cut(s) | 576 |
| AccII | CGCG | 1 cut(s) | 491 |
| AcyI | GRCGYC | 1 cut(s) | 573 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 175 |
| AflIII | ACRYGT | 1 cut(s) | 522 |
| AgsI | TTSAA | 5 cut(s) | 10, 286, 391, 433, 470 |
| AhlI | ACTAGT | 1 cut(s) | 545 |
| AjiI | CACGTC | 1 cut(s) | 525 |
| AluBI | AGCT | 2 cut(s) | 146, 666 |
| AluI | AGCT | 2 cut(s) | 146, 666 |
| Alw26I | GTCTC | 1 cut(s) | 329 |
| AspS9I | GGNCC | 1 cut(s) | 479 |
| AvaII | GGWCC | 1 cut(s) | 479 |
| BccI | CCATC | 3 cut(s) | 254, 282, 398 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 481, 515 |
| BcoDI | GTCTC | 1 cut(s) | 329 |
| BcuI | ACTAGT | 1 cut(s) | 545 |
| BfaI | CTAG | 3 cut(s) | 278, 546, 663 |
| Bme18I | GGWCC | 1 cut(s) | 479 |
| BmgBI | CACGTC | 1 cut(s) | 525 |
| BmgT120I | GGNCC | 1 cut(s) | 479 |
| BmiI | GGNNCC | 2 cut(s) | 167, 480 |
| BmsI | GCATC | 3 cut(s) | 69, 279, 525 |
| BpmI | CTGGAG | 1 cut(s) | 311 |
| BsaHI | GRCGYC | 1 cut(s) | 573 |
| BsaI | GGTCTC | 1 cut(s) | 329 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 175 |
| Bse1I | ACTGG | 1 cut(s) | 444 |
| Bse3DI | GCAATG | 1 cut(s) | 455 |
| BseGI | GGATG | 2 cut(s) | 270, 679 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 175 |
| BseMI | GCAATG | 1 cut(s) | 455 |
| BseMII | CTCAG | 2 cut(s) | 143, 185 |
| BseNI | ACTGG | 1 cut(s) | 444 |
| BseYI | CCCAGC | 1 cut(s) | 508 |
| BsgI | GTGCAG | 2 cut(s) | 66, 468 |
| Bsh1236I | CGCG | 1 cut(s) | 491 |
| Bsh1285I | CGRYCG | 1 cut(s) | 618 |
| BsiEI | CGRYCG | 1 cut(s) | 618 |
| BslFI | GGGAC | 1 cut(s) | 492 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 175 |
| BsmAI | GTCTC | 1 cut(s) | 329 |
| BsmFI | GGGAC | 1 cut(s) | 492 |
| Bso31I | GGTCTC | 1 cut(s) | 329 |
| BspCNI | CTCAG | 2 cut(s) | 144, 184 |
| BspFNI | CGCG | 1 cut(s) | 491 |
| BspLI | GGNNCC | 2 cut(s) | 167, 480 |
| BspTNI | GGTCTC | 1 cut(s) | 329 |
| BsrDI | GCAATG | 1 cut(s) | 455 |
| BsrI | ACTGG | 1 cut(s) | 444 |
| BssNI | GRCGYC | 1 cut(s) | 573 |
| Bst4CI | ACNGT | 2 cut(s) | 319, 366 |
| BstACI | GRCGYC | 1 cut(s) | 573 |
| BstC8I | GCNNGC | 2 cut(s) | 58, 514 |
| BstDEI | CTNAG | 3 cut(s) | 152, 171, 608 |
| BstF5I | GGATG | 2 cut(s) | 270, 679 |
| BstFNI | CGCG | 1 cut(s) | 491 |
| BstMAI | GTCTC | 1 cut(s) | 329 |
| BstMCI | CGRYCG | 1 cut(s) | 618 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 337 |
| BstNSI | RCATGY | 1 cut(s) | 651 |
| BstUI | CGCG | 1 cut(s) | 491 |
| BtrI | CACGTC | 1 cut(s) | 525 |
| BtsCI | GGATG | 2 cut(s) | 270, 679 |
| BtsI | GCAGTG | 2 cut(s) | 78, 456 |
| BtsIMutI | CAGTG | 4 cut(s) | 78, 179, 451, 456 |
| Cac8I | GCNNGC | 2 cut(s) | 58, 514 |
| Cfr13I | GGNCC | 1 cut(s) | 479 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviAII | CATG | 2 cut(s) | 415, 648 |
| CviJI | RGCY | 7 cut(s) | 146, 179, 340, 372, 512, 624, 666 |
| CviKI_1 | RGCY | 7 cut(s) | 146, 179, 340, 372, 512, 624, 666 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 3 cut(s) | 152, 171, 608 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 317 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 317 |
| Eco31I | GGTCTC | 1 cut(s) | 329 |
| Eco47I | GGWCC | 1 cut(s) | 479 |
| EcoO109I | RGGNCCY | 1 cut(s) | 479 |
| EcoT22I | ATGCAT | 1 cut(s) | 439 |
| FaeI | CATG | 2 cut(s) | 418, 651 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 104, 136 |
| FaqI | GGGAC | 1 cut(s) | 492 |
| FatI | CATG | 2 cut(s) | 414, 647 |
| FauNDI | CATATG | 1 cut(s) | 352 |
| FokI | GGATG | 2 cut(s) | 257, 666 |
| FspBI | CTAG | 3 cut(s) | 278, 546, 663 |
| GsaI | CCCAGC | 1 cut(s) | 512 |
| GsuI | CTGGAG | 1 cut(s) | 311 |
| Hin1I | GRCGYC | 1 cut(s) | 573 |
| Hin1II | CATG | 2 cut(s) | 418, 651 |
| HincII | GTYRAC | 1 cut(s) | 577 |
| HindII | GTYRAC | 1 cut(s) | 577 |
| HinfI | GANTC | 3 cut(s) | 154, 493, 554 |
| Hpy166II | GTNNAC | 3 cut(s) | 227, 520, 577 |
| Hpy188I | TCNGA | 1 cut(s) | 362 |
| Hpy188III | TCNNGA | 2 cut(s) | 109, 401 |
| Hpy8I | GTNNAC | 3 cut(s) | 227, 520, 577 |
| Hpy99I | CGWCG | 1 cut(s) | 323 |
| HpyAV | CCTTC | 3 cut(s) | 106, 397, 464 |
| HpyCH4III | ACNGT | 2 cut(s) | 319, 366 |
| HpyCH4IV | ACGT | 2 cut(s) | 524, 573 |
| HpyCH4V | TGCA | 8 cut(s) | 26, 83, 350, 356, 437, 449, 560, 645 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 337 |
| HpyF3I | CTNAG | 3 cut(s) | 152, 171, 608 |
| HpySE526I | ACGT | 2 cut(s) | 524, 573 |
| Hsp92I | GRCGYC | 1 cut(s) | 573 |
| Hsp92II | CATG | 2 cut(s) | 418, 651 |
| LpnPI | CCDG | 8 cut(s) | 36, 70, 94, 341, 457, 522, 526, 665 |
| LweI | GCATC | 3 cut(s) | 69, 279, 525 |
| MaeI | CTAG | 3 cut(s) | 278, 546, 663 |
| MaeII | ACGT | 2 cut(s) | 524, 573 |
| MaeIII | GTNAC | 4 cut(s) | 32, 299, 393, 451 |
| MfeI | CAATTG | 2 cut(s) | 528, 561 |
| MluCI | AATT | 3 cut(s) | 93, 528, 561 |
| MlyI | GAGTC | 2 cut(s) | 163, 563 |
| MnlI | CCTC | 4 cut(s) | 180, 184, 492, 670 |
| Mph1103I | ATGCAT | 1 cut(s) | 439 |
| MslI | CAYNNNNRTG | 1 cut(s) | 402 |
| MunI | CAATTG | 2 cut(s) | 528, 561 |
| MvnI | CGCG | 1 cut(s) | 491 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 337 |
| NdeI | CATATG | 1 cut(s) | 352 |
| NlaIII | CATG | 2 cut(s) | 418, 651 |
| NlaIV | GGNNCC | 2 cut(s) | 167, 480 |
| NmuCI | GTSAC | 1 cut(s) | 451 |
| NsiI | ATGCAT | 1 cut(s) | 439 |
| NspI | RCATGY | 1 cut(s) | 651 |
| PfeI | GAWTC | 1 cut(s) | 493 |
| PleI | GAGTC | 2 cut(s) | 162, 562 |
| PpsI | GAGTC | 2 cut(s) | 162, 562 |
| PpuMI | RGGWCCY | 1 cut(s) | 479 |
| PsiI | TTATAA | 1 cut(s) | 237 |
| Psp5II | RGGWCCY | 1 cut(s) | 479 |
| PspFI | CCCAGC | 1 cut(s) | 508 |
| PspN4I | GGNNCC | 2 cut(s) | 167, 480 |
| PspPI | GGNCC | 1 cut(s) | 479 |
| PspPPI | RGGWCCY | 1 cut(s) | 479 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| RseI | CAYNNNNRTG | 1 cut(s) | 402 |
| Sau96I | GGNCC | 1 cut(s) | 479 |
| SchI | GAGTC | 2 cut(s) | 163, 563 |
| SetI | ASST | 6 cut(s) | 148, 195, 484, 527, 576, 668 |
| SfaNI | GCATC | 3 cut(s) | 69, 279, 525 |
| SinI | GGWCC | 1 cut(s) | 479 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 402 |
| SpeI | ACTAGT | 1 cut(s) | 545 |
| Sse9I | AATT | 3 cut(s) | 93, 528, 561 |
| SspMI | CTAG | 3 cut(s) | 278, 546, 663 |
| TaaI | ACNGT | 2 cut(s) | 319, 366 |
| TaiI | ACGT | 2 cut(s) | 527, 576 |
| TaqI | TCGA | 2 cut(s) | 63, 614 |
| TaqII | GACCGA | 2 cut(s) | 311, 632 |
| TasI | AATT | 3 cut(s) | 93, 528, 561 |
| TfiI | GAWTC | 1 cut(s) | 493 |
| TscAI | CASTG | 4 cut(s) | 85, 179, 451, 456 |
| TseFI | GTSAC | 1 cut(s) | 451 |
| Tsp45I | GTSAC | 1 cut(s) | 451 |
| TspGWI | ACGGA | 1 cut(s) | 486 |
| TspRI | CASTG | 4 cut(s) | 85, 179, 451, 456 |
| VpaK11BI | GGWCC | 1 cut(s) | 479 |
| XceI | RCATGY | 1 cut(s) | 651 |
| XspI | CTAG | 3 cut(s) | 278, 546, 663 |
| ZraI | GACGTC | 1 cut(s) | 574 |
| Zsp2I | ATGCAT | 1 cut(s) | 439 |