Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0003458

Physical Location & Seq

Genomic Coordinates Forward (+)

1793629 .. 1798811

Gene Structure 5183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG027100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGAGATCTGCGGCGACAAATGGAAGTCGTCGGACGATACGAAGGCTGTGTTGTCCCTTCCGTCACTCGCATCACGCTTTTCGTTTGGCGAAAGAGTTCCGTGGTGGCTGCACGCAACGACCTTTTCGCCGAGAAAAATAACAACAGAAGGGGCGGCGATGGAGTCGAAGCCGCCGTTGAACAAGGATGGCATGGTTGCTTACACCTCCTTCTCTTCCATGTTTTATCCTGGACGAGGCAACAAAATGCTCACTTTGACCCTGTCTACCCTTTTCTTCTTTACTTCATCAACTGTATCTGGTCAACTGTATCTTGTTAATGCCATACAGATACTGGATGGCAGGCTGCGTTGTGACATCATCTGGACTGCCAATTGTTACGGTGGTCTTCTCTCTAAACTTTCGTTTAAGAGTAAGGGGCAATATTTTACACGGATGAAAAATATTCGGCGCAACATAGAGGGCCTTGTATCTGTATCCGGTTGCTCCCTCTTCATTAATGGATTTTCTGTCACTGCAATTAGCGCAATTCCTGAAGGACTATTGACGATCAGGGGTATTGTGACATCCTGCATTGTTAAAGGTCAGAATCCTGGAACTGCTGTCAGGTTGTTGAAATTGTTTCAAGAAAGGAATGGACAGACAGAGAATCTCGAGATGGATGCTTATGGGTTCAAAACTGCTCCTGGAGCAAAACTGAGATTCTTGAAGCGATTAGGTGGGAACCCATTAGTTGAACAGAAAAATTCGGAGCTTACCCTGACTAGGGGGGATGACGTCGGGGACCTGAAGCCATCCATTGGGAACCCGCGAGTTGAACACAAAAAATCGGAGGATGACCCGACACCTGAAGTCAATCAGACAGAGTTTTCTTTATTTGGCCCTTCATTGAACAAAGATGGAATGCTTGTGTGTGGTTCGTTCTTCCTTGATCATCGAGAAGAAGCCGTTCTAGAAGCTTGGCCACAGTTGAAGTCGCTTTTAGAAGATTATGGCATTTCATGTACAATGTATCTGGCTGAGCGTTTCATGACATTATCAACAACCAGCGGGACTGAAGATCCAGATATTATTTACAAGGCTAGGGATGTTCTTGAACTTTTGTCATTAACTCGTGTTCCACCATCAATGGTAATGAAAGTACTGAATGAGAATCTGCAATATGACATCATCAAGACTGCGTATCGTAATGGTGGTTTTTGCTCACAATATAAGATTGACAGGAAGCTAATTAAGAAGCGGCGTGGACTACTTCGGCCCTACTTAAAGGAACTTGGGGTGCTGACGGGTTGTGAGATATATGTTGATGGATGCGCTGTTACTGCTATGGGTTTTAAGCGTCAAGGATTAAAGTTGGTCAGGATTGGCGTGAAAGAGTGCCTTGTTAACAATGTGAGACCTAAAACTATGCTTCGGAAGATGAAGTTGACCCTTGAAAGGATGAAAATGAAAGAGGAAATTACTGCCGGAGAATTTCCTCCTGTGGAATCTGCTGGGAACATGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

502

Amino Acids

56.06

Weight (kDa)

9.25

Isoelectric Point (pI)

36.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	309 - 371	2e-12	Krr1 KH1 domain
KH_KRR1_2nd	PF21800	407 - 474	1.5e-06	KRR1 small subunit processome component, second KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003458)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g00670 FvH4_2g01170
rosa_chinensis	RchiOBHm_Chr7g0179721 RchiOBHm_Chr7g0191051
rosa_laevigata	RLG00000004479 RLG00000005327
rosa_multiflora	Rmu_sc0005329.1_g000038 Rmu_sc0005898.1_g000016 Rmu_sc0026930.1_g000001
rosa_roxburghii	Rroxscaffold_155G00443780 Rroxscaffold_1G00036880 Rroxscaffold_3G00264090 Rroxscaffold_3G00264100 Rroxscaffold_3G00273420 Rroxscaffold_3G00273520
rosa_rugosa	Rorug06G0427500 Rorug06G0427600 Rorug06G0508400
rosa_samantha	Rh1AG145300 Rh1AG145400 Rh1DG151900 Rh5DG372600 Rh5DG427800 Rh7AG027100 Rh7AG377900 Rh7BG026200 Rh7BG118000 Rh7CG028200 Rh7CG120400 Rh7CG120500 Rh7CG397100 Rh7DG027800 Rh7DG119200 Rh7DG119900
rosa_wichuraiana	Rw7G002180 Rw7G010110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	780
AccB7I	CCANNNNNTGG	1 cut(s)	800
AccI	GTMKAC	1 cut(s)	266
AccII	CGCG	1 cut(s)	811
AciI	CCGC	6 cut(s)	12, 155, 173, 809, 1050, 1240
AclWI	GGATC	1 cut(s)	1055
AcoI	YGGCCR	1 cut(s)	962
AcsI	RAATTY	2 cut(s)	745, 1472
AcuI	CTGAAG	4 cut(s)	555, 809, 870, 1077
AcyI	GRCGYC	1 cut(s)	777
AfaI	GTAC	2 cut(s)	1006, 1143
AfiI	CCNNNNNNNGG	5 cut(s)	236, 765, 766, 800, 1437
AjnI	CCWGG	3 cut(s)	229, 592, 685
AluBI	AGCT	3 cut(s)	754, 959, 1228
AluI	AGCT	3 cut(s)	754, 959, 1228
Alw26I	GTCTC	1 cut(s)	1390
AlwI	GGATC	1 cut(s)	1055
AlwNI	CAGNNNCTG	1 cut(s)	334
Ama87I	CYCGRG	1 cut(s)	653
AoxI	GGCC	4 cut(s)	463, 880, 962, 1256
ApeKI	GCWGC	2 cut(s)	109, 346
ApoI	RAATTY	2 cut(s)	745, 1472
AseI	ATTAAT	1 cut(s)	498
Asp700I	GAANNNNTTC	2 cut(s)	96, 948
AspLEI	GCGC	3 cut(s)	453, 527, 1316
AspS9I	GGNCC	4 cut(s)	463, 784, 881, 1257
AvaI	CYCGRG	1 cut(s)	653
AvaII	GGWCC	1 cut(s)	784
BalI	TGGCCA	1 cut(s)	964
BauI	CACGAG	1 cut(s)	1113
BbsI	GAAGAC	1 cut(s)	380
BbvI	GCAGC	2 cut(s)	96, 333
BccI	CCATC	8 cut(s)	154, 182, 332, 652, 802, 893, 1132, 1301
BceAI	ACGGC	2 cut(s)	160, 932
BcgI	CGANNNNNNTGC	2 cut(s)	644, 678
BciT130I	CCWGG	3 cut(s)	231, 594, 687
BciVI	GTATCC	1 cut(s)	487
BclI	TGATCA	1 cut(s)	931
BcoDI	GTCTC	1 cut(s)	1390
BfaI	CTAG	3 cut(s)	765, 953, 1083
BfuI	GTATCC	1 cut(s)	487
BglII	AGATCT	1 cut(s)	6
BisI	GCNGC	6 cut(s)	13, 110, 156, 173, 347, 1241
BlpI	GCTNAGC	1 cut(s)	1020
BlsI	GCNGC	6 cut(s)	14, 111, 157, 174, 348, 1242
BmcAI	AGTACT	1 cut(s)	1143
Bme1390I	CCNGG	3 cut(s)	231, 594, 687
Bme18I	GGWCC	1 cut(s)	784
BmeT110I	CYCGRG	1 cut(s)	653
BmgT120I	GGNCC	4 cut(s)	463, 784, 881, 1257
BmiI	GGNNCC	3 cut(s)	725, 785, 806
BmrFI	CCNGG	3 cut(s)	231, 594, 687
BmsI	GCATC	3 cut(s)	80, 652, 1301
BpiI	GAAGAC	1 cut(s)	380
BpmI	CTGGAG	1 cut(s)	708
Bpu1102I	GCTNAGC	1 cut(s)	1020
BsaHI	GRCGYC	1 cut(s)	777
BsaI	GGTCTC	1 cut(s)	1390
BsaJI	CCNNGG	1 cut(s)	101
BsaWI	WCCGGW	1 cut(s)	479
Bsc4I	CCNNNNNNNGG	5 cut(s)	236, 765, 766, 800, 1437
Bse1I	ACTGG	1 cut(s)	339
BseBI	CCWGG	3 cut(s)	231, 594, 687
BseDI	CCNNGG	1 cut(s)	101
BseLI	CCNNNNNNNGG	5 cut(s)	236, 765, 766, 800, 1437
BseMII	CTCAG	2 cut(s)	689, 1011
BseNI	ACTGG	1 cut(s)	339
BseXI	GCAGC	2 cut(s)	96, 333
BseYI	CCCAGC	1 cut(s)	1493
BsgI	GTGCAG	1 cut(s)	95
Bsh1236I	CGCG	1 cut(s)	811
BshFI	GGCC	4 cut(s)	465, 882, 964, 1258
BsiHKCI	CYCGRG	1 cut(s)	653
BsiSI	CCGG	2 cut(s)	480, 1467
BslFI	GGGAC	3 cut(s)	40, 797, 1066
BslI	CCNNNNNNNGG	5 cut(s)	236, 765, 766, 800, 1437
BsmAI	GTCTC	1 cut(s)	1390
BsmFI	GGGAC	3 cut(s)	40, 797, 1066
BsmI	GAATGC	1 cut(s)	909
BsnI	GGCC	4 cut(s)	465, 882, 964, 1258
Bso31I	GGTCTC	1 cut(s)	1390
BsoBI	CYCGRG	1 cut(s)	653
Bsp1407I	TGTACA	1 cut(s)	1004
Bsp143I	GATC	4 cut(s)	6, 549, 931, 1060
Bsp1720I	GCTNAGC	1 cut(s)	1020
BspACI	CCGC	6 cut(s)	12, 155, 173, 809, 1050, 1240
BspANI	GGCC	4 cut(s)	465, 882, 964, 1258
BspCNI	CTCAG	2 cut(s)	690, 1012
BspFNI	CGCG	1 cut(s)	811
BspHI	TCATGA	1 cut(s)	1029
BspLI	GGNNCC	3 cut(s)	725, 785, 806
BspPI	GGATC	1 cut(s)	1055
BspTNI	GGTCTC	1 cut(s)	1390
BsrGI	TGTACA	1 cut(s)	1004
BsrI	ACTGG	1 cut(s)	339
BssECI	CCNNGG	1 cut(s)	101
BssMI	GATC	4 cut(s)	6, 549, 931, 1060
BssNI	GRCGYC	1 cut(s)	777
BssSI	CACGAG	1 cut(s)	1113
Bst2BI	CACGAG	1 cut(s)	1113
Bst2UI	CCWGG	3 cut(s)	231, 594, 687
Bst4CI	ACNGT	4 cut(s)	295, 309, 383, 969
Bst6I	CTCTTC	2 cut(s)	220, 497
BstACI	GRCGYC	1 cut(s)	777
BstAUI	TGTACA	1 cut(s)	1004
BstC8I	GCNNGC	2 cut(s)	114, 344
BstDEI	CTNAG	2 cut(s)	698, 1020
BstDSI	CCRYGG	1 cut(s)	101
BstENI	CCTNNNNNAGG	1 cut(s)	234
BstFNI	CGCG	1 cut(s)	811
BstHHI	GCGC	3 cut(s)	453, 527, 1316
BstKTI	GATC	4 cut(s)	9, 552, 934, 1063
BstMAI	GTCTC	1 cut(s)	1390
BstMBI	GATC	4 cut(s)	6, 549, 931, 1060
BstMWI	GCNNNNNNNGC	3 cut(s)	524, 689, 1322
BstNI	CCWGG	3 cut(s)	231, 594, 687
BstNSI	RCATGY	1 cut(s)	1504
BstSCI	CCNGG	3 cut(s)	229, 592, 685
BstUI	CGCG	1 cut(s)	811
BstV1I	GCAGC	2 cut(s)	96, 333
BstV2I	GAAGAC	1 cut(s)	380
BstX2I	RGATCY	2 cut(s)	6, 1060
BstYI	RGATCY	2 cut(s)	6, 1060
BsuI	GTATCC	1 cut(s)	487
BsuRI	GGCC	4 cut(s)	465, 882, 964, 1258
BtgI	CCRYGG	1 cut(s)	101
BtgZI	GCGATG	1 cut(s)	173
BtsI	GCAGTG	1 cut(s)	513
BtsIMutI	CAGTG	1 cut(s)	513
Cac8I	GCNNGC	2 cut(s)	114, 344
CaiI	CAGNNNCTG	1 cut(s)	334
CciI	TCATGA	1 cut(s)	1029
CfoI	GCGC	3 cut(s)	453, 527, 1316
Cfr13I	GGNCC	4 cut(s)	463, 784, 881, 1257
CseI	GACGC	1 cut(s)	1328
Csp6I	GTAC	2 cut(s)	1005, 1142
CviAII	CATG	5 cut(s)	193, 220, 1002, 1030, 1501
CviQI	GTAC	2 cut(s)	1005, 1142
DdeI	CTNAG	2 cut(s)	698, 1020
DpnI	GATC	4 cut(s)	8, 551, 933, 1062
DpnII	GATC	4 cut(s)	6, 549, 931, 1060
EaeI	YGGCCR	1 cut(s)	962
Eam1104I	CTCTTC	2 cut(s)	220, 497
EarI	CTCTTC	2 cut(s)	220, 497
Eco31I	GGTCTC	1 cut(s)	1390
Eco47I	GGWCC	1 cut(s)	784
Eco57I	CTGAAG	4 cut(s)	555, 809, 870, 1077
Eco88I	CYCGRG	1 cut(s)	653
EcoNI	CCTNNNNNAGG	1 cut(s)	234
EcoO109I	RGGNCCY	2 cut(s)	463, 784
EcoRII	CCWGG	3 cut(s)	229, 592, 685
EcoT22I	ATGCAT	1 cut(s)	1506
FaeI	CATG	5 cut(s)	196, 223, 1005, 1033, 1504
FalI	AAGNNNNNCTT	2 cut(s)	1365, 1397
FaqI	GGGAC	3 cut(s)	40, 797, 1066
FatI	CATG	5 cut(s)	192, 219, 1001, 1029, 1500
FauI	CCCGC	2 cut(s)	816, 1043
FbaI	TGATCA	1 cut(s)	931
FblI	GTMKAC	1 cut(s)	266
Fnu4HI	GCNGC	6 cut(s)	13, 110, 156, 173, 347, 1241
Fsp4HI	GCNGC	6 cut(s)	13, 110, 156, 173, 347, 1241
FspBI	CTAG	3 cut(s)	765, 953, 1083
GlaI	GCGC	3 cut(s)	452, 526, 1315
GluI	GCNGC	6 cut(s)	13, 110, 156, 173, 347, 1241
GsaI	CCCAGC	1 cut(s)	1497
GsuI	CTGGAG	1 cut(s)	708
HaeIII	GGCC	4 cut(s)	465, 882, 964, 1258
HapII	CCGG	2 cut(s)	480, 1467
HgaI	GACGC	1 cut(s)	1328
HhaI	GCGC	3 cut(s)	453, 527, 1316
Hin1I	GRCGYC	1 cut(s)	777
Hin1II	CATG	5 cut(s)	196, 223, 1005, 1033, 1504
Hin6I	GCGC	3 cut(s)	451, 525, 1314
HinP1I	GCGC	3 cut(s)	451, 525, 1314
HincII	GTYRAC	3 cut(s)	305, 1387, 1428
HindII	GTYRAC	3 cut(s)	305, 1387, 1428
HindIII	AAGCTT	1 cut(s)	957
HinfI	GANTC	6 cut(s)	164, 589, 649, 702, 1153, 1487
HpaI	GTTAAC	1 cut(s)	1387
HpaII	CCGG	2 cut(s)	480, 1467
Hpy166II	GTNNAC	5 cut(s)	267, 305, 1247, 1387, 1428
Hpy188I	TCNGA	6 cut(s)	34, 588, 751, 832, 861, 1416
Hpy8I	GTNNAC	5 cut(s)	267, 305, 1247, 1387, 1428
Hpy99I	CGWCG	2 cut(s)	34, 782
HpyAV	CCTTC	6 cut(s)	37, 68, 143, 220, 530, 894
HpyCH4III	ACNGT	4 cut(s)	295, 309, 383, 969
HpyCH4IV	ACGT	1 cut(s)	777
HpyCH4V	TGCA	5 cut(s)	112, 518, 573, 1159, 1504
HpyF10VI	GCNNNNNNNGC	3 cut(s)	524, 689, 1322
HpyF3I	CTNAG	2 cut(s)	698, 1020
HpySE526I	ACGT	1 cut(s)	777
Hsp92I	GRCGYC	1 cut(s)	777
Hsp92II	CATG	5 cut(s)	196, 223, 1005, 1033, 1504
HspAI	GCGC	3 cut(s)	451, 525, 1314
Ksp22I	TGATCA	1 cut(s)	931
KspAI	GTTAAC	1 cut(s)	1387
Kzo9I	GATC	4 cut(s)	6, 549, 931, 1060
LmnI	GCTCC	4 cut(s)	491, 688, 689, 751
Lsp1109I	GCAGC	2 cut(s)	96, 333
LweI	GCATC	3 cut(s)	80, 652, 1301
MaeI	CTAG	3 cut(s)	765, 953, 1083
MaeII	ACGT	1 cut(s)	777
MaeIII	GTNAC	6 cut(s)	63, 353, 377, 511, 562, 1318
MalI	GATC	4 cut(s)	8, 551, 933, 1062
MboI	GATC	4 cut(s)	6, 549, 931, 1060
MboII	GAAGA	9 cut(s)	207, 268, 380, 484, 916, 953, 998, 1070, 1429
MfeI	CAATTG	1 cut(s)	373
MflI	RGATCY	2 cut(s)	6, 1060
MlsI	TGGCCA	1 cut(s)	964
MluCI	AATT	8 cut(s)	373, 519, 528, 617, 745, 1230, 1458, 1472
MluNI	TGGCCA	1 cut(s)	964
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	1 cut(s)	12
MnlI	CCTC	7 cut(s)	217, 230, 454, 500, 826, 1447, 1488
Mox20I	TGGCCA	1 cut(s)	964
Mph1103I	ATGCAT	1 cut(s)	1506
MroXI	GAANNNNTTC	2 cut(s)	96, 948
MscI	TGGCCA	1 cut(s)	964
Msp20I	TGGCCA	1 cut(s)	964
MspA1I	CMGCKG	1 cut(s)	1050
MspI	CCGG	2 cut(s)	480, 1467
MspR9I	CCNGG	3 cut(s)	231, 594, 687
MunI	CAATTG	1 cut(s)	373
Mva1269I	GAATGC	1 cut(s)	909
MvaI	CCWGG	3 cut(s)	231, 594, 687
MvnI	CGCG	1 cut(s)	811
MwoI	GCNNNNNNNGC	3 cut(s)	524, 689, 1322
NdeII	GATC	4 cut(s)	6, 549, 931, 1060
NlaIII	CATG	5 cut(s)	196, 223, 1005, 1033, 1504
NlaIV	GGNNCC	3 cut(s)	725, 785, 806
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	4 cut(s)	63, 353, 511, 562
NsiI	ATGCAT	1 cut(s)	1506
NspI	RCATGY	1 cut(s)	1504
PaeR7I	CTCGAG	1 cut(s)	653
PagI	TCATGA	1 cut(s)	1029
PcsI	WCGNNNNNNNCGW	2 cut(s)	38, 173
PctI	GAATGC	1 cut(s)	909
PdmI	GAANNNNTTC	2 cut(s)	96, 948
PfeI	GAWTC	5 cut(s)	589, 649, 702, 1153, 1487
PflFI	GACNNNGTC	1 cut(s)	262
PflMI	CCANNNNNTGG	1 cut(s)	800
PfoI	TCCNGGA	3 cut(s)	229, 592, 685
PkrI	GCNGC	6 cut(s)	14, 111, 157, 174, 348, 1242
PleI	GAGTC	1 cut(s)	172
PpsI	GAGTC	1 cut(s)	172
PpuMI	RGGWCCY	1 cut(s)	784
PshBI	ATTAAT	1 cut(s)	498
Psp5II	RGGWCCY	1 cut(s)	784
Psp6I	CCWGG	3 cut(s)	229, 592, 685
PspFI	CCCAGC	1 cut(s)	1493
PspGI	CCWGG	3 cut(s)	229, 592, 685
PspN4I	GGNNCC	3 cut(s)	725, 785, 806
PspPI	GGNCC	4 cut(s)	463, 784, 881, 1257
PspPPI	RGGWCCY	1 cut(s)	784
PstNI	CAGNNNCTG	1 cut(s)	334
PsuI	RGATCY	2 cut(s)	6, 1060
PsyI	GACNNNGTC	1 cut(s)	262
RsaI	GTAC	2 cut(s)	1006, 1143
RsaNI	GTAC	2 cut(s)	1005, 1142
SatI	GCNGC	6 cut(s)	13, 110, 156, 173, 347, 1241
Sau3AI	GATC	4 cut(s)	6, 549, 931, 1060
Sau96I	GGNCC	4 cut(s)	463, 784, 881, 1257
ScaI	AGTACT	1 cut(s)	1143
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	3 cut(s)	231, 594, 687
SfaNI	GCATC	3 cut(s)	80, 652, 1301
Sfr274I	CTCGAG	1 cut(s)	653
SinI	GGWCC	1 cut(s)	784
SlaI	CTCGAG	1 cut(s)	653
SmlI	CTYRAG	1 cut(s)	653
SmoI	CTYRAG	1 cut(s)	653
Sse9I	AATT	8 cut(s)	373, 519, 528, 617, 745, 1230, 1458, 1472
SsiI	CCGC	6 cut(s)	12, 155, 173, 809, 1050, 1240
SspI	AATATT	2 cut(s)	425, 445
SspMI	CTAG	3 cut(s)	765, 953, 1083
StyD4I	CCNGG	3 cut(s)	229, 592, 685
TaaI	ACNGT	4 cut(s)	295, 309, 383, 969
TaiI	ACGT	1 cut(s)	780
TaqI	TCGA	3 cut(s)	167, 654, 937
TasI	AATT	8 cut(s)	373, 519, 528, 617, 745, 1230, 1458, 1472
TatI	WGTACW	2 cut(s)	1004, 1141
TauI	GCSGC	4 cut(s)	15, 158, 175, 1243
TfiI	GAWTC	5 cut(s)	589, 649, 702, 1153, 1487
TscAI	CASTG	1 cut(s)	520
TseFI	GTSAC	4 cut(s)	63, 353, 511, 562
TseI	GCWGC	2 cut(s)	109, 346
Tsp45I	GTSAC	4 cut(s)	63, 353, 511, 562
TspGWI	ACGGA	3 cut(s)	51, 90, 448
TspRI	CASTG	1 cut(s)	520
Tth111I	GACNNNGTC	1 cut(s)	262
Van91I	CCANNNNNTGG	1 cut(s)	800
VpaK11BI	GGWCC	1 cut(s)	784
VspI	ATTAAT	1 cut(s)	498
XagI	CCTNNNNNAGG	1 cut(s)	234
XapI	RAATTY	2 cut(s)	745, 1472
XbaI	TCTAGA	1 cut(s)	952
XceI	RCATGY	1 cut(s)	1504
XcmI	CCANNNNNNNNNTGG	1 cut(s)	331
XhoI	CTCGAG	1 cut(s)	653
XmiI	GTMKAC	1 cut(s)	266
XmnI	GAANNNNTTC	2 cut(s)	96, 948
XspI	CTAG	3 cut(s)	765, 953, 1083
ZraI	GACGTC	1 cut(s)	778
ZrmI	AGTACT	1 cut(s)	1143
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.