AT1G30580

Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
10831673 .. 10835635
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30580.1

Sequence Viewer

Length: 1185 bp
ATGCCTCCGAAAGCCAAAGCTAAAGATGCAGGTCCCGTAGAGAGGCCTATTCTTGGCCGTTTCTCTTCTCACCTCAAGATCGGAATTGTTGGGTTACCAAATGTTGGAAAATCTACTCTTTTCAACACTCTTACAAAGCTTTCAATTCCAGCTGAGAATTTCCCCTTTTGTACCATTGAGCCTAATGAGGCACGTGTGAATATCCCCGATGAGAGGTTCGATTGGCTTTGCCAAACTTACAAGCCTAAGAGTGAGATTCCAGCTTTCTTGGAAATTCATGACATTGCTGGGCTTGTTAGAGGAGCTCATGAAGGACAGGGTCTTGGAAACAACTTCTTGTCCCATATTCGTGCAGTTGATGGAATTTTCCATGTTTTACGTGCTTTTGAAGATGCTGATATTATCCATGTCGACGATATCGTGGATCCTGTTAGAGATTTGGAGACCATTACTGAAGAGTTGCGGCTAAAGGATATTGAATTTGTTGGAAAGAAGATTGATGATGTCGAGAAGAGCATGAAGAGGAGCAATGACAAGCAGCTGAAAATAGAACTTGAGCTCTTGCAAAAGGTAAAAGCTTGGCTAGAAGATGGTAAGGATGTCCGTTTTGGGGACTGGAAAACAGCTGATATCGAGATTTTGAACACTTTCCAATTGCTTTCTGCAAAGCCCGTTGTTTACTTGATTAACCTGAATGAGAGAGACTATCAGAGGAAGAAAAACAAGTTCTTGCCAAAGATTCATGCCTGGGTTCAAGAACACGGTGGTGATACTATGATTCCTTTCAGTGGTGTGTTTGAAAGGAGTCTCGCTGATATGGCCCCAGATGAAGCAGCAAAGTATTGTGAGGAGAACAAACTGCAAAGTGCTCTTCCGAGGATCATCAAAACTGGATTTTCAGCAATTAACCTCATATACTTCTTTACAGCAGGGCCTGATGAGGTGAAGTGCTGGCAAATAAGACGGCAGTCAAAGGCTCCTCAAGCTGCAGGGGCCATTCATACTGATTTTGAGAGAGGATTTATTTGTGCTGAGGTCATGAAATTCGAGGATCTCAAGGAACTTGGCAATGAACCTGCAGTCAAGGCCGCAGGAAAATACAGACAGGAGGGTAAAACATATGTTGTTCAGGATGGAGATATCATTTTCTTCAAGTTCAATGTTTCCGGTGGTGGGAAGAAATGA

Protein Analysis

394

Amino Acids

44.47

Weight (kDa)

6.35

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 26 - 137 3.6e-20 50S ribosome-binding GTPase
FeoB_N PF02421 26 - 72 3e-07 Ferrous iron transport protein B
YchF-GTPase_C PF06071 304 - 387 2.3e-38 Protein of unknown function (DUF933)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 20, 1084
AccB7I CCANNNNNTGG 1 cut(s) 104
AccI GTMKAC 1 cut(s) 411
AciI CCGC 2 cut(s) 463, 1089
AclWI GGATC 4 cut(s) 419, 432, 887, 1059
AcoI YGGCCR 1 cut(s) 55
AcsI RAATTY 5 cut(s) 157, 273, 363, 479, 1043
AcuI CTGAAG 1 cut(s) 474
AcvI CACGTG 1 cut(s) 194
AfaI GTAC 1 cut(s) 172
AfiI CCNNNNNNNGG 7 cut(s) 42, 53, 104, 213, 610, 788, 1173
AflIII ACRYGT 1 cut(s) 193
AgsI TTSAA 9 cut(s) 124, 144, 389, 479, 643, 755, 800, 1153, 1159
AjnI CCWGG 1 cut(s) 746
AleI CACNNNNGTG 1 cut(s) 765
Alw21I GWGCWC 3 cut(s) 307, 561, 871
Alw26I GTCTC 3 cut(s) 437, 696, 812
AlwI GGATC 4 cut(s) 419, 432, 887, 1059
AlwNI CAGNNNCTG 1 cut(s) 935
AoxI GGCC 6 cut(s) 44, 55, 819, 932, 993, 1086
ApeKI GCWGC 3 cut(s) 538, 833, 986
ApoI RAATTY 5 cut(s) 157, 273, 363, 479, 1043
Asp700I GAANNNNTTC 1 cut(s) 647
AspS9I GGNCC 4 cut(s) 32, 820, 932, 993
AsuHPI GGTGA 3 cut(s) 62, 779, 955
AvaII GGWCC 1 cut(s) 32
BamHI GGATCC 1 cut(s) 424
BanII GRGCYC 2 cut(s) 307, 561
BbrPI CACGTG 1 cut(s) 194
Bbv12I GWGCWC 3 cut(s) 307, 561, 871
BbvCI CCTCAGC 1 cut(s) 1032
BbvI GCAGC 3 cut(s) 550, 845, 973
BccI CCATC 3 cut(s) 353, 584, 1127
BceAI ACGGC 2 cut(s) 42, 980
BciT130I CCWGG 1 cut(s) 748
BcoDI GTCTC 3 cut(s) 437, 696, 812
BfaI CTAG 1 cut(s) 584
BfmI CTRYAG 2 cut(s) 987, 1077
BfuAI ACCTGC 2 cut(s) 20, 1084
BisI GCNGC 5 cut(s) 464, 539, 834, 987, 1089
BlsI GCNGC 5 cut(s) 465, 540, 835, 988, 1090
Bme1390I CCNGG 1 cut(s) 748
Bme18I GGWCC 1 cut(s) 32
BmgT120I GGNCC 4 cut(s) 32, 820, 932, 993
BmiI GGNNCC 5 cut(s) 34, 426, 822, 978, 994
BmrFI CCNGG 1 cut(s) 748
BmsI GCATC 2 cut(s) 16, 382
BoxI GACNNNNGTC 1 cut(s) 967
Bpu10I CCTNAGC 1 cut(s) 1032
BpuEI CTTGAG 4 cut(s) 59, 575, 966, 1040
BsaAI YACGTR 2 cut(s) 194, 380
BsaI GGTCTC 1 cut(s) 437
BsaJI CCNNGG 2 cut(s) 747, 875
BsaWI WCCGGW 1 cut(s) 1166
Bsc4I CCNNNNNNNGG 7 cut(s) 42, 53, 104, 213, 610, 788, 1173
Bse1I ACTGG 2 cut(s) 620, 895
Bse3DI GCAATG 3 cut(s) 282, 535, 1075
BseBI CCWGG 1 cut(s) 748
BseDI CCNNGG 2 cut(s) 747, 875
BseGI GGATG 2 cut(s) 604, 1138
BseLI CCNNNNNNNGG 7 cut(s) 42, 53, 104, 213, 610, 788, 1173
BseMI GCAATG 3 cut(s) 282, 535, 1075
BseMII CTCAG 2 cut(s) 144, 1023
BseNI ACTGG 2 cut(s) 620, 895
BseRI GAGGAG 4 cut(s) 315, 538, 863, 969
BseXI GCAGC 3 cut(s) 550, 845, 973
BseYI CCCAGC 1 cut(s) 287
BsgI GTGCAG 1 cut(s) 372
BshFI GGCC 6 cut(s) 46, 57, 821, 934, 995, 1088
BsiHKAI GWGCWC 3 cut(s) 307, 561, 871
BsiSI CCGG 1 cut(s) 1167
BslFI GGGAC 3 cut(s) 18, 325, 626
BslI CCNNNNNNNGG 7 cut(s) 42, 53, 104, 213, 610, 788, 1173
BsmAI GTCTC 3 cut(s) 437, 696, 812
BsmFI GGGAC 3 cut(s) 18, 325, 626
BsnI GGCC 6 cut(s) 46, 57, 821, 934, 995, 1088
Bso31I GGTCTC 1 cut(s) 437
Bsp1286I GDGCHC 3 cut(s) 307, 561, 871
Bsp143I GATC 4 cut(s) 78, 424, 879, 1051
BspACI CCGC 2 cut(s) 463, 1089
BspANI GGCC 6 cut(s) 46, 57, 821, 934, 995, 1088
BspCNI CTCAG 2 cut(s) 145, 1024
BspHI TCATGA 3 cut(s) 277, 307, 1038
BspLI GGNNCC 5 cut(s) 34, 426, 822, 978, 994
BspMAI CTGCAG 2 cut(s) 991, 1081
BspMI ACCTGC 2 cut(s) 20, 1084
BspPI GGATC 4 cut(s) 419, 432, 887, 1059
BspQI GCTCTTC 2 cut(s) 506, 876
BspTNI GGTCTC 1 cut(s) 437
BsrDI GCAATG 3 cut(s) 282, 535, 1075
BsrI ACTGG 2 cut(s) 620, 895
BssECI CCNNGG 2 cut(s) 747, 875
BssMI GATC 4 cut(s) 78, 424, 879, 1051
Bst2UI CCWGG 1 cut(s) 748
Bst4CI ACNGT 1 cut(s) 764
Bst6I CTCTTC 5 cut(s) 70, 450, 506, 515, 876
BstBAI YACGTR 2 cut(s) 194, 380
BstC8I GCNNGC 1 cut(s) 953
BstDEI CTNAG 3 cut(s) 153, 246, 1032
BstEII GGTNACC 1 cut(s) 93
BstF5I GGATG 2 cut(s) 604, 1138
BstKTI GATC 4 cut(s) 81, 427, 882, 1054
BstMAI GTCTC 3 cut(s) 437, 696, 812
BstMBI GATC 4 cut(s) 78, 424, 879, 1051
BstMWI GCNNNNNNNGC 5 cut(s) 26, 818, 983, 992, 1085
BstNI CCWGG 1 cut(s) 748
BstPAI GACNNNNGTC 1 cut(s) 967
BstPI GGTNACC 1 cut(s) 93
BstSCI CCNGG 1 cut(s) 746
BstSFI CTRYAG 2 cut(s) 987, 1077
BstV1I GCAGC 3 cut(s) 550, 845, 973
BstX2I RGATCY 2 cut(s) 424, 1051
BstYI RGATCY 2 cut(s) 424, 1051
BsuRI GGCC 6 cut(s) 46, 57, 821, 934, 995, 1088
BtsCI GGATG 2 cut(s) 604, 1138
BtsIMutI CAGTG 1 cut(s) 793
BveI ACCTGC 2 cut(s) 20, 1084
Cac8I GCNNGC 1 cut(s) 953
CaiI CAGNNNCTG 1 cut(s) 935
CciI TCATGA 3 cut(s) 277, 307, 1038
Cfr13I GGNCC 4 cut(s) 32, 820, 932, 993
Csp6I GTAC 1 cut(s) 171
CviAII CATG 7 cut(s) 278, 308, 371, 407, 517, 743, 1039
CviQI GTAC 1 cut(s) 171
DdeI CTNAG 3 cut(s) 153, 246, 1032
DpnI GATC 4 cut(s) 80, 426, 881, 1053
DpnII GATC 4 cut(s) 78, 424, 879, 1051
EaeI YGGCCR 1 cut(s) 55
Eam1104I CTCTTC 5 cut(s) 70, 450, 506, 515, 876
EarI CTCTTC 5 cut(s) 70, 450, 506, 515, 876
Ecl136II GAGCTC 2 cut(s) 305, 559
Eco147I AGGCCT 1 cut(s) 46
Eco24I GRGCYC 2 cut(s) 307, 561
Eco31I GGTCTC 1 cut(s) 437
Eco32I GATATC 3 cut(s) 418, 631, 1141
Eco47I GGWCC 1 cut(s) 32
Eco53kI GAGCTC 2 cut(s) 305, 559
Eco57I CTGAAG 1 cut(s) 474
Eco72I CACGTG 1 cut(s) 194
Eco91I GGTNACC 1 cut(s) 93
EcoICRI GAGCTC 2 cut(s) 305, 559
EcoO109I RGGNCCY 2 cut(s) 32, 932
EcoO65I GGTNACC 1 cut(s) 93
EcoRII CCWGG 1 cut(s) 746
EcoRV GATATC 3 cut(s) 418, 631, 1141
EcoT38I GRGCYC 2 cut(s) 307, 561
FaeI CATG 7 cut(s) 281, 311, 374, 410, 520, 746, 1042
FaqI GGGAC 3 cut(s) 18, 325, 626
FatI CATG 7 cut(s) 277, 307, 370, 406, 516, 742, 1038
FauNDI CATATG 1 cut(s) 1120
FblI GTMKAC 1 cut(s) 411
Fnu4HI GCNGC 5 cut(s) 464, 539, 834, 987, 1089
FokI GGATG 2 cut(s) 611, 1145
FriOI GRGCYC 2 cut(s) 307, 561
Fsp4HI GCNGC 5 cut(s) 464, 539, 834, 987, 1089
FspBI CTAG 1 cut(s) 584
GluI GCNGC 5 cut(s) 464, 539, 834, 987, 1089
GsaI CCCAGC 1 cut(s) 291
HaeIII GGCC 6 cut(s) 46, 57, 821, 934, 995, 1088
HapII CCGG 1 cut(s) 1167
Hin1II CATG 7 cut(s) 281, 311, 374, 410, 520, 746, 1042
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 2 cut(s) 137, 576
HinfI GANTC 4 cut(s) 256, 739, 778, 805
HpaII CCGG 1 cut(s) 1167
HphI GGTGA 3 cut(s) 62, 779, 955
Hpy166II GTNNAC 2 cut(s) 412, 679
Hpy188I TCNGA 4 cut(s) 9, 83, 711, 876
Hpy188III TCNNGA 8 cut(s) 76, 278, 308, 508, 634, 755, 1039, 1130
Hpy8I GTNNAC 2 cut(s) 412, 679
Hpy99I CGWCG 1 cut(s) 416
HpyAV CCTTC 1 cut(s) 305
HpyCH4III ACNGT 1 cut(s) 764
HpyCH4IV ACGT 2 cut(s) 193, 379
HpyCH4V TGCA 7 cut(s) 29, 353, 565, 665, 862, 989, 1079
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 818, 983, 992, 1085
HpyF3I CTNAG 3 cut(s) 153, 246, 1032
HpySE526I ACGT 2 cut(s) 193, 379
Hsp92II CATG 7 cut(s) 281, 311, 374, 410, 520, 746, 1042
Kzo9I GATC 4 cut(s) 78, 424, 879, 1051
LguI GCTCTTC 2 cut(s) 506, 876
LmnI GCTCC 3 cut(s) 302, 525, 982
Lsp1109I GCAGC 3 cut(s) 550, 845, 973
LweI GCATC 2 cut(s) 16, 382
MaeI CTAG 1 cut(s) 584
MaeII ACGT 2 cut(s) 193, 379
MaeIII GTNAC 1 cut(s) 93
MalI GATC 4 cut(s) 80, 426, 881, 1053
MboI GATC 4 cut(s) 78, 424, 879, 1051
MfeI CAATTG 1 cut(s) 653
MflI RGATCY 2 cut(s) 424, 1051
MhlI GDGCHC 3 cut(s) 307, 561, 871
MluCI AATT 9 cut(s) 84, 144, 157, 273, 363, 479, 653, 903, 1043
MlyI GAGTC 1 cut(s) 814
MmeI TCCRAC 2 cut(s) 85, 466
MroXI GAANNNNTTC 1 cut(s) 647
MseI TTAA 2 cut(s) 687, 906
MslI CAYNNNNRTG 2 cut(s) 348, 765
MspA1I CMGCKG 3 cut(s) 152, 541, 626
MspI CCGG 1 cut(s) 1167
MspR9I CCNGG 1 cut(s) 748
MunI CAATTG 1 cut(s) 653
MvaI CCWGG 1 cut(s) 748
MwoI GCNNNNNNNGC 5 cut(s) 26, 818, 983, 992, 1085
NdeI CATATG 1 cut(s) 1120
NdeII GATC 4 cut(s) 78, 424, 879, 1051
NlaIII CATG 7 cut(s) 281, 311, 374, 410, 520, 746, 1042
NlaIV GGNNCC 5 cut(s) 34, 426, 822, 978, 994
OliI CACNNNNGTG 1 cut(s) 765
PagI TCATGA 3 cut(s) 277, 307, 1038
PceI AGGCCT 1 cut(s) 46
PciSI GCTCTTC 2 cut(s) 506, 876
PcsI WCGNNNNNNNCGW 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 647
PfeI GAWTC 3 cut(s) 256, 739, 778
PflFI GACNNNGTC 1 cut(s) 318
PflMI CCANNNNNTGG 1 cut(s) 104
PkrI GCNGC 5 cut(s) 465, 540, 835, 988, 1090
PleI GAGTC 1 cut(s) 813
PmaCI CACGTG 1 cut(s) 194
PmlI CACGTG 1 cut(s) 194
PpsI GAGTC 1 cut(s) 813
Ppu21I YACGTR 2 cut(s) 194, 380
PpuMI RGGWCCY 1 cut(s) 32
PshAI GACNNNNGTC 1 cut(s) 967
Psp124BI GAGCTC 2 cut(s) 307, 561
Psp5II RGGWCCY 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 746
PspCI CACGTG 1 cut(s) 194
PspEI GGTNACC 1 cut(s) 93
PspFI CCCAGC 1 cut(s) 287
PspGI CCWGG 1 cut(s) 746
PspN4I GGNNCC 5 cut(s) 34, 426, 822, 978, 994
PspPI GGNCC 4 cut(s) 32, 820, 932, 993
PspPPI RGGWCCY 1 cut(s) 32
PstI CTGCAG 2 cut(s) 991, 1081
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 2 cut(s) 424, 1051
PsyI GACNNNGTC 1 cut(s) 318
PvuII CAGCTG 3 cut(s) 152, 541, 626
RsaI GTAC 1 cut(s) 172
RsaNI GTAC 1 cut(s) 171
RseI CAYNNNNRTG 2 cut(s) 348, 765
SacI GAGCTC 2 cut(s) 307, 561
SalI GTCGAC 1 cut(s) 410
SapI GCTCTTC 2 cut(s) 506, 876
SaqAI TTAA 2 cut(s) 687, 906
SatI GCNGC 5 cut(s) 464, 539, 834, 987, 1089
Sau3AI GATC 4 cut(s) 78, 424, 879, 1051
Sau96I GGNCC 4 cut(s) 32, 820, 932, 993
SchI GAGTC 1 cut(s) 814
ScrFI CCNGG 1 cut(s) 748
SduI GDGCHC 3 cut(s) 307, 561, 871
SfaNI GCATC 2 cut(s) 16, 382
SfcI CTRYAG 2 cut(s) 987, 1077
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 2 cut(s) 348, 765
SmlI CTYRAG 4 cut(s) 74, 554, 981, 1055
SmoI CTYRAG 4 cut(s) 74, 554, 981, 1055
Sse9I AATT 9 cut(s) 84, 144, 157, 273, 363, 479, 653, 903, 1043
SseBI AGGCCT 1 cut(s) 46
SsiI CCGC 2 cut(s) 463, 1089
SspMI CTAG 1 cut(s) 584
SstI GAGCTC 2 cut(s) 307, 561
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 1 cut(s) 746
TaaI ACNGT 1 cut(s) 764
TaiI ACGT 2 cut(s) 196, 382
TaqI TCGA 5 cut(s) 219, 411, 507, 633, 1047
TasI AATT 9 cut(s) 84, 144, 157, 273, 363, 479, 653, 903, 1043
TauI GCSGC 2 cut(s) 466, 1091
TfiI GAWTC 3 cut(s) 256, 739, 778
Tru1I TTAA 2 cut(s) 687, 906
Tru9I TTAA 2 cut(s) 687, 906
TscAI CASTG 1 cut(s) 793
TseI GCWGC 3 cut(s) 538, 833, 986
TspDTI ATGAA 8 cut(s) 266, 324, 533, 731, 843, 989, 1055, 1086
TspGWI ACGGA 1 cut(s) 593
TspRI CASTG 1 cut(s) 793
Tth111I GACNNNGTC 1 cut(s) 318
Van91I CCANNNNNTGG 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 5 cut(s) 157, 273, 363, 479, 1043
XmiI GTMKAC 1 cut(s) 411
XmnI GAANNNNTTC 1 cut(s) 647
XspI CTAG 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.