photo-lyase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30580 |
| fragaria_vesca | FvH4_3g10200 |
| malus_domestica | MD05G1272300.v1.1 MD10G1252400.v1.1 |
| prunus_persica | Prupe.4G091100_v2.0.a1 |
| pyrus_communis | pycom05g25420 pycom10g20820 |
| rosa_chinensis | RchiOBHm_Chr2g0163541 RchiOBHm_Chr3g0491881 RchiOBHm_Chr4g0397881 RchiOBHm_Chr5g0016421 |
| rosa_laevigata | RLG00000032248 |
| rosa_multiflora | Rmu_sc0007506.1_g000001 Rmu_sc0012840.1_g000001 Rmu_sc0030879.1_g000006 Rmu_sc0033694.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00060480 Rroxscaffold_2G00138980 Rroxscaffold_5G00346700 Rroxscaffold_7G00170750 |
| rosa_rugosa | Rorug04G0049400 Rorug05G0032000 Rorug05G0032100 |
| rosa_samantha | Rh1BG158400 Rh1CG190100 Rh2AG301600 Rh2BG381000 Rh2DG325700 Rh3BG085200 Rh3BG217800 Rh3CG085400 Rh3CG230100 Rh4AG109900 Rh4AG196500 Rh5AG070900 Rh5AG125700 Rh5BG124700 Rh5CG079800 Rh5CG137000 Rh5DG067600 Rh5DG124400 Rh6AG215300 Rh7DG041100 Rh7DG139900 |
| rosa_wichuraiana | Rw5G010890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 65 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 13 |
| AlwI | GGATC | 1 cut(s) | 65 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BauI | CACGAG | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 13 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 13 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 13 |
| Bsp143I | GATC | 1 cut(s) | 70 |
| BspPI | GGATC | 1 cut(s) | 65 |
| BssMI | GATC | 1 cut(s) | 70 |
| BssSI | CACGAG | 1 cut(s) | 37 |
| Bst2BI | CACGAG | 1 cut(s) | 37 |
| Bst4CI | ACNGT | 2 cut(s) | 88, 114 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 65 |
| BstKTI | GATC | 1 cut(s) | 73 |
| BstMBI | GATC | 1 cut(s) | 70 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 65 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 8 |
| DpnI | GATC | 1 cut(s) | 72 |
| DpnII | GATC | 1 cut(s) | 70 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| FaeI | CATG | 1 cut(s) | 11 |
| FaiI | YATR | 5 cut(s) | 9, 30, 118, 120, 151 |
| FatI | CATG | 1 cut(s) | 7 |
| FspEI | CC | 8 cut(s) | 20, 25, 26, 35, 41, 64, 65, 87 |
| Hin1II | CATG | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 109 |
| HpyAV | CCTTC | 1 cut(s) | 49 |
| HpyCH4III | ACNGT | 2 cut(s) | 88, 114 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 65 |
| Hsp92II | CATG | 1 cut(s) | 11 |
| Kzo9I | GATC | 1 cut(s) | 70 |
| LmnI | GCTCC | 1 cut(s) | 43 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 72 |
| MboI | GATC | 1 cut(s) | 70 |
| MfeI | CAATTG | 1 cut(s) | 47 |
| MluCI | AATT | 2 cut(s) | 47, 91 |
| MnlI | CCTC | 1 cut(s) | 33 |
| MunI | CAATTG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 65 |
| NdeII | GATC | 1 cut(s) | 70 |
| NlaIII | CATG | 1 cut(s) | 11 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| Sau3AI | GATC | 1 cut(s) | 70 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SgeI | CNNG | 5 cut(s) | 20, 35, 49, 51, 90 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 2 cut(s) | 47, 91 |
| SspI | AATATT | 1 cut(s) | 125 |
| TaaI | ACNGT | 2 cut(s) | 88, 114 |
| TasI | AATT | 2 cut(s) | 47, 91 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspGWI | ACGGA | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 91 |