Rh3BG217800
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0002020
Physical Location & Seq
Forward (+)
19673474 .. 19675322
1849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG217800.1

Sequence Viewer

Length: 318 bp
ATGCCTGGGACGGAGGAACCGTACACAACCACGATGACGACGGCGCAACCTGCATCAGCAGCCATGGCCACCGCGTTGCCCTTGGATTCTCCGAAGACCGACTCCGAAGCCGCCGACACGGAGCCAAACCCTAACTCTAATCCTTCAAACGCATTGTTCCCTGTTTCCCCAAACGGCTTTGCTGTCTGCCTTCTCAGGTTGACAACATATGTGGAGAAACATGAGTTTGTTTTTGATGCAGTGCTGAATGAGGAAGTGTCTAATGATGAGGCTTTGTGCTCAACTTGGAAGGATGATGGGGCGACTGTCTTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

105

Amino Acids

11.2

Weight (kDa)

4.05

Isoelectric Point (pI)

50.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 58
AccII CGCG 1 cut(s) 74
AciI CCGC 2 cut(s) 72, 111
AcoI YGGCCR 1 cut(s) 66
AfaI GTAC 1 cut(s) 23
AgsI TTSAA 1 cut(s) 147
AjnI CCWGG 1 cut(s) 4
Alw21I GWGCWC 1 cut(s) 281
AoxI GGCC 1 cut(s) 66
ApeKI GCWGC 1 cut(s) 59
AspLEI GCGC 1 cut(s) 46
BalI TGGCCA 1 cut(s) 68
BbsI GAAGAC 2 cut(s) 101, 301
Bbv12I GWGCWC 1 cut(s) 281
BbvI GCAGC 1 cut(s) 71
BccI CCATC 1 cut(s) 290
BceAI ACGGC 2 cut(s) 57, 190
BciT130I CCWGG 1 cut(s) 6
BfuAI ACCTGC 1 cut(s) 58
BisI GCNGC 2 cut(s) 60, 111
BlsI GCNGC 2 cut(s) 61, 112
Bme1390I CCNGG 1 cut(s) 6
BmiI GGNNCC 2 cut(s) 18, 123
BmrFI CCNGG 1 cut(s) 6
BmsI GCATC 2 cut(s) 62, 226
BpiI GAAGAC 2 cut(s) 101, 301
BsaJI CCNNGG 3 cut(s) 5, 63, 81
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
BseBI CCWGG 1 cut(s) 6
BseDI CCNNGG 3 cut(s) 5, 63, 81
BseGI GGATG 1 cut(s) 298
BseMII CTCAG 1 cut(s) 208
BseXI GCAGC 1 cut(s) 71
Bsh1236I CGCG 1 cut(s) 74
BshFI GGCC 1 cut(s) 68
BsiHKAI GWGCWC 1 cut(s) 281
BslFI GGGAC 1 cut(s) 22
BsmFI GGGAC 1 cut(s) 22
BsnI GGCC 1 cut(s) 68
Bsp1286I GDGCHC 1 cut(s) 281
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 2 cut(s) 72, 111
BspANI GGCC 1 cut(s) 68
BspCNI CTCAG 1 cut(s) 207
BspFNI CGCG 1 cut(s) 74
BspLI GGNNCC 2 cut(s) 18, 123
BspMI ACCTGC 1 cut(s) 58
BssECI CCNNGG 3 cut(s) 5, 63, 81
BssT1I CCWWGG 2 cut(s) 63, 81
Bst2UI CCWGG 1 cut(s) 6
Bst4CI ACNGT 2 cut(s) 21, 307
BstDEI CTNAG 1 cut(s) 194
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 298
BstFNI CGCG 1 cut(s) 74
BstHHI GCGC 1 cut(s) 46
BstMWI GCNNNNNNNGC 3 cut(s) 50, 59, 65
BstNI CCWGG 1 cut(s) 6
BstSCI CCNGG 1 cut(s) 4
BstUI CGCG 1 cut(s) 74
BstV1I GCAGC 1 cut(s) 71
BstV2I GAAGAC 2 cut(s) 101, 301
BsuRI GGCC 1 cut(s) 68
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 1 cut(s) 298
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 246
BveI ACCTGC 1 cut(s) 58
CfoI GCGC 1 cut(s) 46
Csp6I GTAC 1 cut(s) 22
CspCI CAANNNNNGTGG 2 cut(s) 192, 227
CviAII CATG 2 cut(s) 64, 221
CviJI RGCY 6 cut(s) 62, 68, 110, 124, 177, 272
CviKI_1 RGCY 6 cut(s) 62, 68, 110, 124, 177, 272
CviQI GTAC 1 cut(s) 22
DdeI CTNAG 1 cut(s) 194
EaeI YGGCCR 1 cut(s) 66
Eco130I CCWWGG 2 cut(s) 63, 81
EcoRII CCWGG 1 cut(s) 4
EcoT14I CCWWGG 2 cut(s) 63, 81
ErhI CCWWGG 2 cut(s) 63, 81
FaeI CATG 2 cut(s) 67, 224
FaiI YATR 4 cut(s) 65, 208, 210, 222
FaqI GGGAC 1 cut(s) 22
FatI CATG 2 cut(s) 63, 220
FauNDI CATATG 1 cut(s) 208
Fnu4HI GCNGC 2 cut(s) 60, 111
FokI GGATG 1 cut(s) 305
Fsp4HI GCNGC 2 cut(s) 60, 111
GlaI GCGC 1 cut(s) 45
GluI GCNGC 2 cut(s) 60, 111
HaeIII GGCC 1 cut(s) 68
HhaI GCGC 1 cut(s) 46
Hin1II CATG 2 cut(s) 67, 224
Hin6I GCGC 1 cut(s) 44
HinP1I GCGC 1 cut(s) 44
HincII GTYRAC 1 cut(s) 201
HindII GTYRAC 1 cut(s) 201
HinfI GANTC 2 cut(s) 86, 101
Hpy166II GTNNAC 2 cut(s) 24, 201
Hpy188I TCNGA 2 cut(s) 93, 106
Hpy188III TCNNGA 1 cut(s) 315
Hpy8I GTNNAC 2 cut(s) 24, 201
Hpy99I CGWCG 1 cut(s) 43
HpyAV CCTTC 3 cut(s) 153, 200, 283
HpyCH4III ACNGT 2 cut(s) 21, 307
HpyCH4V TGCA 2 cut(s) 53, 239
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 59, 65
HpyF3I CTNAG 1 cut(s) 194
Hsp92II CATG 2 cut(s) 67, 224
HspAI GCGC 1 cut(s) 44
LmnI GCTCC 1 cut(s) 121
LpnPI CCDG 4 cut(s) 18, 63, 174, 181
Lsp1109I GCAGC 1 cut(s) 71
LweI GCATC 2 cut(s) 62, 226
MboII GAAGA 2 cut(s) 106, 301
MhlI GDGCHC 1 cut(s) 281
MlsI TGGCCA 1 cut(s) 68
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 1 cut(s) 95
MnlI CCTC 3 cut(s) 7, 244, 262
Mox20I TGGCCA 1 cut(s) 68
MscI TGGCCA 1 cut(s) 68
Msp20I TGGCCA 1 cut(s) 68
MspR9I CCNGG 1 cut(s) 6
MvaI CCWGG 1 cut(s) 6
MvnI CGCG 1 cut(s) 74
MwoI GCNNNNNNNGC 3 cut(s) 50, 59, 65
NcoI CCATGG 1 cut(s) 63
NdeI CATATG 1 cut(s) 208
NlaIII CATG 2 cut(s) 67, 224
NlaIV GGNNCC 2 cut(s) 18, 123
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PfeI GAWTC 1 cut(s) 86
PkrI GCNGC 2 cut(s) 61, 112
PleI GAGTC 1 cut(s) 95
PpsI GAGTC 1 cut(s) 95
Psp6I CCWGG 1 cut(s) 4
PspGI CCWGG 1 cut(s) 4
PspN4I GGNNCC 2 cut(s) 18, 123
RsaI GTAC 1 cut(s) 23
RsaNI GTAC 1 cut(s) 22
SatI GCNGC 2 cut(s) 60, 111
SchI GAGTC 1 cut(s) 95
ScrFI CCNGG 1 cut(s) 6
SduI GDGCHC 1 cut(s) 281
SetI ASST 2 cut(s) 52, 200
SfaNI GCATC 2 cut(s) 62, 226
SsiI CCGC 2 cut(s) 72, 111
StyD4I CCNGG 1 cut(s) 4
StyI CCWWGG 2 cut(s) 63, 81
TaaI ACNGT 2 cut(s) 21, 307
TaqII GACCGA 1 cut(s) 113
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 1 cut(s) 86
TscAI CASTG 1 cut(s) 246
TseI GCWGC 1 cut(s) 59
TspGWI ACGGA 2 cut(s) 26, 134
TspRI CASTG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.