AT1G54350

ABC transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001312
Physical Location & Seq
Forward (+)
20286856 .. 20290401
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G54350.1

Sequence Viewer

Length: 2121 bp
ATGATTTTGATGATAACAGCTCCCGTTTGTCCTCCTCACCTTCTCCTACGCCATTCTTCTTTGCTTCGCCATGAATCATCGATCGGAAACTTTCATCGGAAGAAAAATCCACGTTTCAGAACCGTATCATGTTCTTCTTTGTTGCCGCAACCGTCGGTTCGTCCGGATAAGGCATCGGAGTTGAAGACTCTGTGGAAGAAATTCTACAAAGTCGCGTCGCCTTATTGGTTTTCCGAGGACAAAGACCAAGCCAGGCTTCGTCTCGCCGCCGTCTTCGCCCTTACTCTCGCCACCACCGGCATTAGCGTCGGCTTCAATTTCCTCGGCCGTGATTTCTACAATTCTCTCGCCAACAAAGACCAAGAGCAATTCACCAAGCAGTTGTTCTATTACCTCTGTGCTTTCGCCGGCGGCATTCCGTTCTTTGTGCTACGAGATTATACAAAAGAGACTTTATCACTGAGATGGAGATCATGGATGACCAAATATTACCTGCAGCGCTATCTCAAAGATCAAACCTTTTACAAGATCCAGTCTCAGTCTATCATCGACAATCCTGATCAGCGCCTTGTTGACGATTTGAGTTCCTTCACTGGAACTGCCTTGTCTTTCTCTTTGACGCTTGTTAATGCCACCATTGATCTCATCTCTTTTAGCAACATCCTCTTCACCATTTATCCTCCTCTCTTTCTCGTTCTCTTGCTCTACTCCTTTGGCGGTACAGCCATCAGTGTCTTTCTTGGCAAGGGACTAGTGAATCTCAACTTTCTACAAGAGAAGAAAGAGGCTGACTTTCGTTACAGCCTTGTACGAGTGAGGGAAAATGCTGAATCTATTGCTTTCTATGGAGGCGAACAGAATGAAATGCAGCTTCTGCTTCAGCGTTTCAGAAGCGCTTTTGATAATTTAACTGAATTGCTGATAGCATCTAGAAACCTAGAATTCTTCACCGATGGATATCGCTACCTCATTCAGATTCTTCCAGTTGCTGTTGTTGCCCCAATGTATTTCTCCGGGAAGATTGAGTTTGGTGTCATTAACCAGTCAGTGTCTGCATTCAATCATATCCTAGGAGACTTCTCGCTCGTTGTCTATCAGTTTCAAGCTATCAGCTCTTTTTCTGCTGTCATTGATCGACTAGGTGAATTTGATGATCTTTTGGATAACAACATCTTCAGAGATCCATCTGACACTGTGGACGAGATTGAGCTGACATATCAGAGTGAGATGAACTCTTCACTGCTGGACACCAATGGTTCAATCAAGTCCCAACCGAACCAAAAGCGTCTGGAGATCGAGGAGCTTACTCTTCAGACACCAACAAACGGAACCACATTGGTTCACAACTTATCTGCAGATGTATATGACAAGGATCACCTACTGATAATGGGTCCTAGTGGGAGTGGAAAAACTTCGCTGCTAAGAGCAATGGCTGGTCTTTGGAGGTCAGGGAAAGGAAAAATCACGTTCTACCTCGATCCTGAGGTAGATTTTACACAGGAGAAATCTGATACTCAGGAAAATTCAGGGAAAAGAGGAGACGTATTGTTCCTTCCACAAAGGCCTTATATGGTTCTGGGATCTTTGCGTCAGCAATTGCTTTATCCTACCTGGAGTGCAACTGTGGAGGAGACGACACCTGGTGGCAGTAATATTGACGGTTCACCACCTCTGCTGATTAGAGAGGACGGAAATGAAAAGCCGACAACAGATGATCTGATGCGGACTCTAGAGAAGGTTTGTCTTGGACATATAGCGGATCGCTTTGGTGGTCTTGATTCGATACACGAGTGGTCCAGTGTTCTCTCACTTGGTGAGCAGCAGCGCCTTGCCTTTGCACGGTTATTGCTGTCTCAGCCAAAGCTGGCGCTCCTGGATGAATCCACCAGTGCGTTGGATGAAGCTAATGAGGCGTTCCTGTACCAGCAAATCCAGTCGGCTGGCATTACATATATAAGCATTGGCCACCGCCGGACTTTAACGAAATTCCATAACAAGATCTTACAAATCTCAACGGCAGACCCGAAGAGCAATGAACGTAACTGGCGAATAGAGGACGTGGATGCCCAAGATTCTTTGTACGGTAGATTGAATCAAAAGGAGGTGCCAAGTGAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

706

Amino Acids

80.05

Weight (kDa)

5.79

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 77 - 337 3.2e-53 ABC transporter transmembrane region 2
ABC_membrane PF00664 90 - 357 5.1e-08 ABC transporter transmembrane region
SbmA_BacA PF05992 120 - 385 6.4e-17 SbmA/BacA-like family
ABC_tran PF00005 448 - 630 1.1e-17 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 501
AccB1I GGYRCC 1 cut(s) 2104
AccII CGCG 1 cut(s) 215
AccIII TCCGGA 1 cut(s) 163
AciI CCGC 7 cut(s) 146, 267, 411, 717, 1723, 1757, 1969
AclWI GGATC 6 cut(s) 523, 1175, 1380, 1472, 1588, 1767
AcoI YGGCCR 2 cut(s) 325, 1963
AcsI RAATTY 5 cut(s) 200, 941, 1145, 1522, 1985
AcuI CTGAAG 3 cut(s) 863, 1159, 1295
AdeI CACNNNGTG 2 cut(s) 1643, 1814
AfaI GTAC 4 cut(s) 721, 810, 1922, 2081
AfeI AGCGCT 2 cut(s) 500, 895
AfiI CCNNNNNNNGG 2 cut(s) 1325, 1839
AgsI TTSAA 6 cut(s) 184, 316, 1060, 1103, 1260, 2092
AhlI ACTAGT 1 cut(s) 751
AjiI CACGTC 1 cut(s) 2059
AjnI CCWGG 4 cut(s) 251, 1610, 1639, 1872
AjuI GAANNNNNNNTTGG 4 cut(s) 240, 272, 368, 400
AluBI AGCT 9 cut(s) 20, 871, 1106, 1113, 1210, 1303, 1864, 1904, 2118
AluI AGCT 9 cut(s) 20, 871, 1106, 1113, 1210, 1303, 1864, 1904, 2118
Alw26I GTCTC 7 cut(s) 266, 443, 540, 1068, 1533, 1625, 1857
AlwI GGATC 6 cut(s) 523, 1175, 1380, 1472, 1588, 1767
AlwNI CAGNNNCTG 3 cut(s) 874, 989, 1052
Aor13HI TCCGGA 1 cut(s) 163
Aor51HI AGCGCT 2 cut(s) 500, 895
AoxI GGCC 3 cut(s) 325, 1562, 1963
ApeKI GCWGC 5 cut(s) 496, 868, 1417, 1819, 1822
ApoI RAATTY 5 cut(s) 200, 941, 1145, 1522, 1985
Asp700I GAANNNNTTC 2 cut(s) 200, 1411
AspA2I CCTAGG 1 cut(s) 1069
AspLEI GCGC 5 cut(s) 501, 567, 896, 1827, 1870
AspS9I GGNCC 2 cut(s) 1391, 1794
AsuC2I CCSGG 1 cut(s) 1015
AsuHPI GGTGA 8 cut(s) 29, 364, 661, 940, 1154, 1367, 1656, 1826
AvaII GGWCC 2 cut(s) 1391, 1794
AvrII CCTAGG 1 cut(s) 1069
AxyI CCTNAGG 1 cut(s) 1482
BaeI ACNNNNGTAYC 2 cut(s) 1775, 1808
BalI TGGCCA 1 cut(s) 1965
BanI GGYRCC 1 cut(s) 2104
BarI GAAGNNNNNNTAC 4 cut(s) 188, 220, 1536, 1568
BauI CACGAG 1 cut(s) 1787
BbsI GAAGAC 2 cut(s) 191, 265
BbvI GCAGC 5 cut(s) 508, 880, 1404, 1831, 1834
BccI CCATC 4 cut(s) 459, 734, 947, 1192
BceAI ACGGC 3 cut(s) 254, 312, 2031
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 4 cut(s) 253, 1612, 1641, 1874
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 1 cut(s) 1015
BcoDI GTCTC 7 cut(s) 266, 443, 540, 1068, 1533, 1625, 1857
BcuI ACTAGT 1 cut(s) 751
BfaI CTAG 7 cut(s) 752, 930, 938, 1070, 1139, 1395, 1730
BfmI CTRYAG 2 cut(s) 494, 1353
BfoI RGCGCY 5 cut(s) 502, 568, 897, 1828, 1871
BfuAI ACCTGC 1 cut(s) 501
BglII AGATCT 1 cut(s) 1998
BisI GCNGC 8 cut(s) 146, 267, 412, 497, 869, 1418, 1820, 1823
BlnI CCTAGG 1 cut(s) 1069
BlsI GCNGC 8 cut(s) 147, 268, 413, 498, 870, 1419, 1821, 1824
Bme1390I CCNGG 5 cut(s) 253, 1015, 1612, 1641, 1874
Bme18I GGWCC 2 cut(s) 1391, 1794
BmgBI CACGTC 1 cut(s) 2059
BmgT120I GGNCC 2 cut(s) 1391, 1794
BmiI GGNNCC 3 cut(s) 1330, 1392, 2106
BmrFI CCNGG 5 cut(s) 253, 1015, 1612, 1641, 1874
BmsI GCATC 4 cut(s) 182, 935, 1710, 2053
BpiI GAAGAC 2 cut(s) 191, 265
BplI GAGNNNNNCTC 2 cut(s) 1217, 1249
BpmI CTGGAG 2 cut(s) 1310, 1633
BpuMI CCSGG 1 cut(s) 1015
Bsa29I ATCGAT 1 cut(s) 80
BsaBI GATNNNNATC 2 cut(s) 469, 957
BsaJI CCNNGG 3 cut(s) 234, 322, 1069
BsaWI WCCGGW 1 cut(s) 163
Bsc4I CCNNNNNNNGG 2 cut(s) 1325, 1839
Bse118I RCCGGY 2 cut(s) 296, 407
Bse1I ACTGG 8 cut(s) 532, 598, 983, 1042, 1797, 1887, 1933, 2048
Bse21I CCTNAGG 1 cut(s) 1482
Bse3DI GCAATG 2 cut(s) 1434, 2038
Bse8I GATNNNNATC 2 cut(s) 469, 957
BseAI TCCGGA 1 cut(s) 163
BseBI CCWGG 4 cut(s) 253, 1612, 1641, 1874
BseCI ATCGAT 1 cut(s) 80
BseDI CCNNGG 3 cut(s) 234, 322, 1069
BseGI GGATG 5 cut(s) 483, 660, 1882, 1903, 2068
BseJI GATNNNNATC 2 cut(s) 469, 957
BseLI CCNNNNNNNGG 2 cut(s) 1325, 1839
BseMI GCAATG 2 cut(s) 1434, 2038
BseMII CTCAG 5 cut(s) 452, 551, 1473, 1529, 1868
BseNI ACTGG 8 cut(s) 532, 598, 983, 1042, 1797, 1887, 1933, 2048
BseRI GAGGAG 5 cut(s) 24, 672, 1313, 1551, 1643
BseX3I CGGCCG 1 cut(s) 325
BseXI GCAGC 5 cut(s) 508, 880, 1404, 1831, 1834
Bsh1236I CGCG 1 cut(s) 215
Bsh1285I CGRYCG 2 cut(s) 84, 328
BshFI GGCC 3 cut(s) 327, 1564, 1965
BshNI GGYRCC 1 cut(s) 2104
BshVI ATCGAT 1 cut(s) 80
BsiEI CGRYCG 2 cut(s) 84, 328
BsiSI CCGG 5 cut(s) 164, 297, 408, 1014, 1972
BslFI GGGAC 2 cut(s) 762, 1252
BslI CCNNNNNNNGG 2 cut(s) 1325, 1839
BsmAI GTCTC 7 cut(s) 266, 443, 540, 1068, 1533, 1625, 1857
BsmBI CGTCTC 3 cut(s) 266, 1533, 1625
BsmFI GGGAC 2 cut(s) 762, 1252
BsmI GAATGC 2 cut(s) 414, 1055
BsnI GGCC 3 cut(s) 327, 1564, 1965
Bsp13I TCCGGA 1 cut(s) 163
BspACI CCGC 7 cut(s) 146, 267, 411, 717, 1723, 1757, 1969
BspANI GGCC 3 cut(s) 327, 1564, 1965
BspCNI CTCAG 5 cut(s) 453, 550, 1474, 1528, 1867
BspDI ATCGAT 1 cut(s) 80
BspEI TCCGGA 1 cut(s) 163
BspFNI CGCG 1 cut(s) 215
BspLI GGNNCC 3 cut(s) 1330, 1392, 2106
BspMAI CTGCAG 2 cut(s) 498, 1357
BspMI ACCTGC 1 cut(s) 501
BspPI GGATC 6 cut(s) 523, 1175, 1380, 1472, 1588, 1767
BspQI GCTCTTC 1 cut(s) 2021
BspT107I GGYRCC 1 cut(s) 2104
BsrDI GCAATG 2 cut(s) 1434, 2038
BsrFI RCCGGY 2 cut(s) 296, 407
BsrI ACTGG 8 cut(s) 532, 598, 983, 1042, 1797, 1887, 1933, 2048
BssAI RCCGGY 2 cut(s) 296, 407
BssECI CCNNGG 3 cut(s) 234, 322, 1069
BssSI CACGAG 1 cut(s) 1787
BssT1I CCWWGG 1 cut(s) 1069
Bst2BI CACGAG 1 cut(s) 1787
Bst2UI CCWGG 4 cut(s) 253, 1612, 1641, 1874
Bst4CI ACNGT 7 cut(s) 124, 153, 1195, 1624, 1661, 1842, 2084
Bst6I CTCTTC 4 cut(s) 671, 1240, 1314, 2021
BstAPI GCANNNNNTGC 1 cut(s) 874
BstC8I GCNNGC 3 cut(s) 409, 1866, 1942
BstDEI CTNAG 6 cut(s) 461, 537, 1421, 1482, 1515, 1854
BstF5I GGATG 5 cut(s) 483, 660, 1882, 1903, 2068
BstFNI CGCG 1 cut(s) 215
BstH2I RGCGCY 5 cut(s) 502, 568, 897, 1828, 1871
BstHHI GCGC 5 cut(s) 501, 567, 896, 1827, 1870
BstMAI GTCTC 7 cut(s) 266, 443, 540, 1068, 1533, 1625, 1857
BstMCI CGRYCG 2 cut(s) 84, 328
BstMWI GCNNNNNNNGC 5 cut(s) 275, 874, 995, 1855, 1910
BstNI CCWGG 4 cut(s) 253, 1612, 1641, 1874
BstSCI CCNGG 5 cut(s) 251, 1013, 1610, 1639, 1872
BstSFI CTRYAG 2 cut(s) 494, 1353
BstUI CGCG 1 cut(s) 215
BstV1I GCAGC 5 cut(s) 508, 880, 1404, 1831, 1834
BstV2I GAAGAC 2 cut(s) 191, 265
BstX2I RGATCY 4 cut(s) 528, 1180, 1580, 1998
BstXI CCANNNNNNTGG 2 cut(s) 1894, 1940
BstYI RGATCY 4 cut(s) 528, 1180, 1580, 1998
BstZI CGGCCG 1 cut(s) 325
Bsu15I ATCGAT 1 cut(s) 80
Bsu36I CCTNAGG 1 cut(s) 1482
BsuRI GGCC 3 cut(s) 327, 1564, 1965
BsuTUI ATCGAT 1 cut(s) 80
BtrI CACGTC 1 cut(s) 2059
BtsCI GGATG 5 cut(s) 483, 660, 1882, 1903, 2068
BtsI GCAGTG 1 cut(s) 1238
BtsIMutI CAGTG 8 cut(s) 458, 591, 736, 1053, 1191, 1238, 1804, 1894
BveI ACCTGC 1 cut(s) 501
Cac8I GCNNGC 3 cut(s) 409, 1866, 1942
CaiI CAGNNNCTG 3 cut(s) 874, 989, 1052
CfoI GCGC 5 cut(s) 501, 567, 896, 1827, 1870
Cfr10I RCCGGY 2 cut(s) 296, 407
Cfr13I GGNCC 2 cut(s) 1391, 1794
ClaI ATCGAT 1 cut(s) 80
CseI GACGC 5 cut(s) 204, 295, 628, 1274, 1577
CsiI ACCWGGT 1 cut(s) 1639
Csp6I GTAC 4 cut(s) 720, 809, 1921, 2080
CviAII CATG 3 cut(s) 71, 129, 474
CviQI GTAC 4 cut(s) 720, 809, 1921, 2080
DdeI CTNAG 6 cut(s) 461, 537, 1421, 1482, 1515, 1854
DraIII CACNNNGTG 2 cut(s) 1643, 1814
EaeI YGGCCR 2 cut(s) 325, 1963
EagI CGGCCG 1 cut(s) 325
Eam1104I CTCTTC 4 cut(s) 671, 1240, 1314, 2021
EarI CTCTTC 4 cut(s) 671, 1240, 1314, 2021
EclXI CGGCCG 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 1069
Eco147I AGGCCT 1 cut(s) 1564
Eco32I GATATC 1 cut(s) 959
Eco47I GGWCC 2 cut(s) 1391, 1794
Eco47III AGCGCT 2 cut(s) 500, 895
Eco52I CGGCCG 1 cut(s) 325
Eco57I CTGAAG 3 cut(s) 863, 1159, 1295
Eco81I CCTNAGG 1 cut(s) 1482
EcoO109I RGGNCCY 1 cut(s) 1391
EcoRI GAATTC 1 cut(s) 941
EcoRII CCWGG 4 cut(s) 251, 1610, 1639, 1872
EcoRV GATATC 1 cut(s) 959
EcoT14I CCWWGG 1 cut(s) 1069
ErhI CCWWGG 1 cut(s) 1069
Esp3I CGTCTC 3 cut(s) 266, 1533, 1625
FaeI CATG 3 cut(s) 74, 132, 477
FalI AAGNNNNNCTT 2 cut(s) 240, 272
FaqI GGGAC 2 cut(s) 762, 1252
FatI CATG 3 cut(s) 70, 128, 473
FbaI TGATCA 1 cut(s) 559
Fnu4HI GCNGC 8 cut(s) 146, 267, 412, 497, 869, 1418, 1820, 1823
FokI GGATG 5 cut(s) 490, 647, 1889, 1910, 2075
Fsp4HI GCNGC 8 cut(s) 146, 267, 412, 497, 869, 1418, 1820, 1823
FspBI CTAG 7 cut(s) 752, 930, 938, 1070, 1139, 1395, 1730
GlaI GCGC 5 cut(s) 500, 566, 895, 1826, 1869
GluI GCNGC 8 cut(s) 146, 267, 412, 497, 869, 1418, 1820, 1823
GsuI CTGGAG 2 cut(s) 1310, 1633
HaeII RGCGCY 5 cut(s) 502, 568, 897, 1828, 1871
HaeIII GGCC 3 cut(s) 327, 1564, 1965
HapII CCGG 5 cut(s) 164, 297, 408, 1014, 1972
HgaI GACGC 5 cut(s) 204, 295, 628, 1274, 1577
HhaI GCGC 5 cut(s) 501, 567, 896, 1827, 1870
Hin1II CATG 3 cut(s) 74, 132, 477
Hin6I GCGC 5 cut(s) 499, 565, 894, 1825, 1868
HinP1I GCGC 5 cut(s) 499, 565, 894, 1825, 1868
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HpaII CCGG 5 cut(s) 164, 297, 408, 1014, 1972
HphI GGTGA 8 cut(s) 29, 364, 661, 940, 1154, 1367, 1656, 1826
Hpy166II GTNNAC 4 cut(s) 574, 1198, 1342, 1664
Hpy188III TCNNGA 8 cut(s) 164, 557, 930, 1289, 1481, 1517, 1730, 1775
Hpy8I GTNNAC 4 cut(s) 574, 1198, 1342, 1664
Hpy99I CGWCG 3 cut(s) 157, 220, 311
HpyAV CCTTC 4 cut(s) 50, 598, 1562, 1729
HpyCH4III ACNGT 7 cut(s) 124, 153, 1195, 1624, 1661, 1842, 2084
HpyCH4IV ACGT 5 cut(s) 112, 1466, 1542, 2038, 2058
HpyCH4V TGCA 6 cut(s) 496, 868, 1055, 1355, 1619, 1838
HpyF10VI GCNNNNNNNGC 5 cut(s) 275, 874, 995, 1855, 1910
HpyF3I CTNAG 6 cut(s) 461, 537, 1421, 1482, 1515, 1854
HpySE526I ACGT 5 cut(s) 112, 1466, 1542, 2038, 2058
Hsp92II CATG 3 cut(s) 74, 132, 477
HspAI GCGC 5 cut(s) 499, 565, 894, 1825, 1868
Kpn2I TCCGGA 1 cut(s) 163
KroI GCCGGC 1 cut(s) 407
KroNI GCCGGC 1 cut(s) 409
Ksp22I TGATCA 1 cut(s) 559
LguI GCTCTTC 1 cut(s) 2021
LmnI GCTCC 3 cut(s) 25, 1300, 1875
Lsp1109I GCAGC 5 cut(s) 508, 880, 1404, 1831, 1834
LweI GCATC 4 cut(s) 182, 935, 1710, 2053
MabI ACCWGGT 1 cut(s) 1639
MaeI CTAG 7 cut(s) 752, 930, 938, 1070, 1139, 1395, 1730
MaeII ACGT 5 cut(s) 112, 1466, 1542, 2038, 2058
MaeIII GTNAC 2 cut(s) 797, 2039
MfeI CAATTG 1 cut(s) 1595
MflI RGATCY 4 cut(s) 528, 1180, 1580, 1998
MlsI TGGCCA 1 cut(s) 1965
MluNI TGGCCA 1 cut(s) 1965
MlyI GAGTC 2 cut(s) 181, 1720
MmeI TCCRAC 1 cut(s) 1875
Mox20I TGGCCA 1 cut(s) 1965
MreI CGCCGGCG 1 cut(s) 407
MroI TCCGGA 1 cut(s) 163
MroNI GCCGGC 1 cut(s) 407
MroXI GAANNNNTTC 2 cut(s) 200, 1411
MscI TGGCCA 1 cut(s) 1965
MseI TTAA 4 cut(s) 627, 908, 1038, 1979
MslI CAYNNNNRTG 1 cut(s) 463
Msp20I TGGCCA 1 cut(s) 1965
MspI CCGG 5 cut(s) 164, 297, 408, 1014, 1972
MspR9I CCNGG 5 cut(s) 253, 1015, 1612, 1641, 1874
MunI CAATTG 1 cut(s) 1595
Mva1269I GAATGC 2 cut(s) 414, 1055
MvaI CCWGG 4 cut(s) 253, 1612, 1641, 1874
MvnI CGCG 1 cut(s) 215
MwoI GCNNNNNNNGC 5 cut(s) 275, 874, 995, 1855, 1910
NaeI GCCGGC 1 cut(s) 409
NciI CCSGG 1 cut(s) 1015
NgoMIV GCCGGC 1 cut(s) 407
NlaIII CATG 3 cut(s) 74, 132, 477
NlaIV GGNNCC 3 cut(s) 1330, 1392, 2106
NmeAIII GCCGAG 1 cut(s) 303
PceI AGGCCT 1 cut(s) 1564
PciSI GCTCTTC 1 cut(s) 2021
PcsI WCGNNNNNNNCGW 2 cut(s) 2021, 2044
PctI GAATGC 2 cut(s) 414, 1055
PdiI GCCGGC 1 cut(s) 409
PdmI GAANNNNTTC 2 cut(s) 200, 1411
PfeI GAWTC 8 cut(s) 74, 757, 830, 976, 1778, 1880, 2072, 2092
PfoI TCCNGGA 2 cut(s) 1013, 1872
PkrI GCNGC 8 cut(s) 147, 268, 413, 498, 870, 1419, 1821, 1824
Ple19I CGATCG 1 cut(s) 84
PleI GAGTC 2 cut(s) 181, 1720
PpsI GAGTC 2 cut(s) 181, 1720
PpuMI RGGWCCY 1 cut(s) 1391
Psp5II RGGWCCY 1 cut(s) 1391
Psp6I CCWGG 4 cut(s) 251, 1610, 1639, 1872
PspGI CCWGG 4 cut(s) 251, 1610, 1639, 1872
PspN4I GGNNCC 3 cut(s) 1330, 1392, 2106
PspPI GGNCC 2 cut(s) 1391, 1794
PspPPI RGGWCCY 1 cut(s) 1391
PstI CTGCAG 2 cut(s) 498, 1357
PstNI CAGNNNCTG 3 cut(s) 874, 989, 1052
PsuI RGATCY 4 cut(s) 528, 1180, 1580, 1998
PvuI CGATCG 1 cut(s) 84
RsaI GTAC 4 cut(s) 721, 810, 1922, 2081
RsaNI GTAC 4 cut(s) 720, 809, 1921, 2080
RseI CAYNNNNRTG 1 cut(s) 463
SapI GCTCTTC 1 cut(s) 2021
SaqAI TTAA 4 cut(s) 627, 908, 1038, 1979
SatI GCNGC 8 cut(s) 146, 267, 412, 497, 869, 1418, 1820, 1823
Sau96I GGNCC 2 cut(s) 1391, 1794
SchI GAGTC 2 cut(s) 181, 1720
ScrFI CCNGG 5 cut(s) 253, 1015, 1612, 1641, 1874
SexAI ACCWGGT 1 cut(s) 1639
SfaNI GCATC 4 cut(s) 182, 935, 1710, 2053
SfcI CTRYAG 2 cut(s) 494, 1353
SgrAI CRCCGGYG 1 cut(s) 407
SinI GGWCC 2 cut(s) 1391, 1794
SmiMI CAYNNNNRTG 1 cut(s) 463
SpeI ACTAGT 1 cut(s) 751
SseBI AGGCCT 1 cut(s) 1564
SsiI CCGC 7 cut(s) 146, 267, 411, 717, 1723, 1757, 1969
SspI AATATT 2 cut(s) 488, 1654
SspMI CTAG 7 cut(s) 752, 930, 938, 1070, 1139, 1395, 1730
StuI AGGCCT 1 cut(s) 1564
StyD4I CCNGG 5 cut(s) 251, 1013, 1610, 1639, 1872
StyI CCWWGG 1 cut(s) 1069
TaaI ACNGT 7 cut(s) 124, 153, 1195, 1624, 1661, 1842, 2084
TaiI ACGT 5 cut(s) 115, 1469, 1545, 2041, 2061
TaqI TCGA 6 cut(s) 80, 549, 1135, 1296, 1476, 1781
TauI GCSGC 3 cut(s) 148, 269, 414
TfiI GAWTC 8 cut(s) 74, 757, 830, 976, 1778, 1880, 2072, 2092
Tru1I TTAA 4 cut(s) 627, 908, 1038, 1979
Tru9I TTAA 4 cut(s) 627, 908, 1038, 1979
TscAI CASTG 8 cut(s) 465, 598, 736, 1053, 1198, 1245, 1804, 1894
TseI GCWGC 5 cut(s) 496, 868, 1417, 1819, 1822
TspDTI ATGAA 8 cut(s) 83, 87, 876, 1244, 1710, 1893, 1914, 2049
TspGWI ACGGA 3 cut(s) 408, 1341, 1704
TspRI CASTG 8 cut(s) 465, 598, 736, 1053, 1198, 1245, 1804, 1894
VpaK11BI GGWCC 2 cut(s) 1391, 1794
XapI RAATTY 5 cut(s) 200, 941, 1145, 1522, 1985
XbaI TCTAGA 2 cut(s) 929, 1729
XcmI CCANNNNNNNNNTGG 1 cut(s) 1891
XmaJI CCTAGG 1 cut(s) 1069
XmnI GAANNNNTTC 2 cut(s) 200, 1411
XspI CTAG 7 cut(s) 752, 930, 938, 1070, 1139, 1395, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.