Rroxscaffold_1G00056520

ABC transporter D family member 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0001312
Physical Location & Seq
Forward (+)
78272275 .. 78278140
5866 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00056520.1

Sequence Viewer

Length: 2250 bp
ATGATAATACAGGCTCAAAGTCACTGTGTCTCACTCTGCTCGGCTCATGGCTACTCCCCCCACCACTCCCATCGTCACGTTAAACTAGTAGTGGCACCACCCAGGTTTCCATCACTGCCCACAATGCCCACCACCACTCGCAACAGAAACTCCGTTAGAAGAAGAAGAAGAAACAACGCCGCTTCATGGCGTCGTTCTGCTGCGGCGTCCGACTCTGTACCACCGCCACCACCTGCTCCTCCAACCCCGGAAAAGCAAAGGGAGGGTTCGGATTTGCAGACGCTTCTCCGGAGATTCTGGAAGGTGGCGGCGCCGTACTGGTCCTCCGACGACAAAGTCCAGGCCAGGATGCAGCTGGGAGGAGTCTTCCTTCTCACTCTCGCCACCACCGGGATCAGCGTCGGCTTCAGTTTTCTGGGCCGGGACTTCTACAATGCTCTTGCCAATAAGGACCAGGAGCAATTCACGAAGCAATTGCTTTACTACCTGGGTGCCTTTGCTGGTGGAATTCCGATTTTTGTGTTGCGGGATTATGCAAGAGAAACTCTTTCTTTGAGGTGGAGATCTTGGATGACGCGTTATTACATTGACCGTTACCTGAGCAACCAAACATTTTACAGAATTCAATCCCAATCAATCATTGATAATCCAGATCAGCGAATTGTTGATGATCTAAGTTCTTTCACAGGGACAGCCCTGTCATTCTCTTTAACACTCTTCAATGCTGTGATAGATCTCATATCATTCAGTAACATCTTATTTGGTATCTATCCTCCGCTGTTTGTTGTTCTTCTAGTATATTCGATTGGCGGAACAGTGATCAGTGTCTTTATTGGAAGGGGTTTGGTGACATTAAACTTCCTGCAAGAGAAAAAGGAAGCAGATTTTCGTTATGGACTTGTGCGCGTTCGAGAAAATGCTGAATCAATAGCTTTCTATAGTGGTGAAGACAATGAAATGCAACTTTTGCTGCAACGCTTTAAAAGTGCTTTTGAAAATCTAACTCAATTGTTGATAGCTTCAAGAAATCTTGAGTTTTTCACCAGTGGATACCGCTATCTTATTCAAATTCTTCCTGCTGCTGTCGTTGCTCCTATGTACTTCTCTGGAAAAATTGAGTTTGGTGTCATTAATCAGTCAGTATCTGCTTTTAATCATATCCTGGGGGACTTCTCCCTTATCGTGTACCAATTTCAGTCTCTAAGCGCATTTTCAGCAGTAATTGATCGACTTGGTGAATTTGATGATTATTTGGATATTTGCTCTCAACGCCATTCTGACCCTGCAGAAGGGATAAGTCTTACATATAGTAATGTTAAAACTTCAGCTGAACTGGAGCCAAATGGATCCATACCCATAGATAAGCAGCAAAAGCTAATGGATATAGAGAATTTGACTGTGAAAACACCAAGTAACACTACATTGGTCAGGGATTTGTCATTGGTAATCAACAACAACGAGAATCTATTGGTGACCGGACCTAGCGGGAGTGGTAAGACTTCTTTGTTAAGAACTTTGGCTGGTCTTTGGAGTGCTGGAAAAGGAAAAATCACGTTCTATGTAGAAGATGAAGAAGAACTTCTACCATCCAATTCTCCAGGTGTAGTTCCTCTCGATACTGCTAATGATAAATCTGGGGAACTTGAAAGACCCTCAAATAGGAATTATAAGGGCATATTTTTCCTTCCTCAAAGACCGTATATGGTTCTGGGAACACTTCGTCAGCAATTGCTGTATCCTACATGGGCTAATGATGAGGCTTCCACATTAGACACTACTAAACCAACTGGTTCTCTGCCTTTCTTGATGCAGGCCCCAAACTCACAGCATAAGAGTGCAAAGCCTAAACCCACAACGGAGGATATGATACAGGTTTTGGAGGATGTCCGGCTTGGCTATATATTATCCCGATTCAGTAATTTGGATTGTACTTATGAATGGTCTAGTGTCCTCTCCCTTGGAGAGCAGCAACGCCTTGCTTTTGCACGACTGTTGCTTTCGAAACCAAAGTTGGTTCTTTTAGATGAATCTACCAGTGCTTTAGACGAAGCCAACGAGGCTCATCTATACAAGCAGATAGAAAGAGCAGGCATCACCTATATTAGCATTGGCCACCGGCGAACTCTATATCAGTACCACAACAAGAACTTGCGTATATCCACAGTCGATCCGACCAATGCCCAACAGAATTGGCTCATTGAACCCATCAATCAAGACAATTTGTATAATCTGTCAAATCTACAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

749

Amino Acids

84.46

Weight (kDa)

8.37

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 113 - 368 1.8e-51 ABC transporter transmembrane region 2
ABC_membrane PF00664 122 - 388 2e-07 ABC transporter transmembrane region
SbmA_BacA PF05992 151 - 416 7.7e-19 SbmA/BacA-like family
ABC_tran PF00005 477 - 679 2.4e-17 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1668
AarI CACCTGC 1 cut(s) 241
AasI GACNNNNNNGTC 2 cut(s) 335, 697
Acc36I ACCTGC 1 cut(s) 241
AccB1I GGYRCC 3 cut(s) 94, 310, 491
AccII CGCG 2 cut(s) 577, 906
AccIII TCCGGA 1 cut(s) 288
AciI CCGC 9 cut(s) 180, 203, 224, 308, 526, 776, 810, 1054, 1485
AclWI GGATC 4 cut(s) 401, 1341, 1354, 2162
AcoI YGGCCR 1 cut(s) 2110
AcsI RAATTY 5 cut(s) 507, 621, 1068, 1238, 1390
AcuI CTGAAG 2 cut(s) 391, 1308
AcyI GRCGYC 3 cut(s) 190, 206, 311
AfaI GTAC 6 cut(s) 219, 317, 1100, 1187, 1930, 2135
AfiI CCNNNNNNNGG 4 cut(s) 186, 390, 1289, 1659
AflIII ACRYGT 1 cut(s) 575
AgsI TTSAA 7 cut(s) 626, 721, 995, 1023, 1067, 1646, 2201
AhlI ACTAGT 1 cut(s) 85
AjnI CCWGG 7 cut(s) 101, 339, 344, 453, 486, 1161, 1597
AjuI GAANNNNNNNTTGG 2 cut(s) 1994, 2026
AluBI AGCT 5 cut(s) 355, 932, 1019, 1328, 1375
AluI AGCT 5 cut(s) 355, 932, 1019, 1328, 1375
Alw26I GTCTC 2 cut(s) 34, 1203
AlwI GGATC 4 cut(s) 401, 1341, 1354, 2162
AlwNI CAGNNNCTG 1 cut(s) 1145
Aor13HI TCCGGA 1 cut(s) 288
AoxI GGCC 4 cut(s) 342, 418, 1812, 2110
ApeKI GCWGC 6 cut(s) 200, 352, 970, 1079, 1366, 1966
ApoI RAATTY 5 cut(s) 507, 621, 1068, 1238, 1390
AseI ATTAAT 1 cut(s) 1131
Asp700I GAANNNNTTC 1 cut(s) 1578
AspLEI GCGC 3 cut(s) 313, 906, 1208
AspS9I GGNCC 5 cut(s) 321, 418, 451, 1478, 1813
AsuC2I CCSGG 3 cut(s) 248, 391, 422
AsuHPI GGTGA 6 cut(s) 859, 956, 1033, 1247, 1483, 2086
AsuII TTCGAA 1 cut(s) 2000
AvaII GGWCC 3 cut(s) 321, 451, 1478
BalI TGGCCA 1 cut(s) 2112
BamHI GGATCC 1 cut(s) 1346
BanI GGYRCC 3 cut(s) 94, 310, 491
BarI GAAGNNNNNNTAC 2 cut(s) 1566, 1598
BbsI GAAGAC 2 cut(s) 358, 954
BbvI GCAGC 6 cut(s) 187, 364, 957, 1066, 1378, 1978
BccI CCATC 4 cut(s) 78, 118, 1594, 2213
BceAI ACGGC 1 cut(s) 298
BcgI CGANNNNNNTGC 2 cut(s) 457, 491
BciT130I CCWGG 7 cut(s) 103, 341, 346, 455, 488, 1163, 1599
BciVI GTATCC 2 cut(s) 1043, 1746
BclI TGATCA 1 cut(s) 819
BcnI CCSGG 3 cut(s) 248, 391, 422
BcoDI GTCTC 2 cut(s) 34, 1203
BcuI ACTAGT 1 cut(s) 85
BfaI CTAG 4 cut(s) 86, 794, 1482, 1944
BfmI CTRYAG 3 cut(s) 937, 1284, 2240
BfoI RGCGCY 1 cut(s) 314
BfuAI ACCTGC 1 cut(s) 241
BfuI GTATCC 2 cut(s) 1043, 1746
BglI GCCNNNNNGGC 1 cut(s) 2057
BglII AGATCT 2 cut(s) 563, 733
BisI GCNGC 9 cut(s) 180, 201, 204, 309, 353, 971, 1080, 1367, 1967
BlsI GCNGC 9 cut(s) 181, 202, 205, 310, 354, 972, 1081, 1368, 1968
Bme18I GGWCC 3 cut(s) 321, 451, 1478
BmgT120I GGNCC 5 cut(s) 321, 418, 451, 1478, 1813
BmiI GGNNCC 6 cut(s) 96, 312, 493, 1338, 1348, 1815
BmsI GCATC 3 cut(s) 339, 1797, 2100
BpiI GAAGAC 2 cut(s) 358, 954
BpmI CTGGAG 2 cut(s) 1355, 1581
Bpu10I CCTNAGC 1 cut(s) 599
Bpu14I TTCGAA 1 cut(s) 2000
BpuEI CTTGAG 1 cut(s) 1052
BpuMI CCSGG 3 cut(s) 248, 391, 422
BsaHI GRCGYC 3 cut(s) 190, 206, 311
BsaJI CCNNGG 5 cut(s) 101, 246, 487, 1162, 1957
BsaWI WCCGGW 2 cut(s) 288, 1475
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 308, 338
Bsc4I CCNNNNNNNGG 4 cut(s) 186, 390, 1289, 1659
Bse118I RCCGGY 1 cut(s) 2115
Bse1I ACTGG 5 cut(s) 323, 1044, 1338, 1792, 2034
BseAI TCCGGA 1 cut(s) 288
BseBI CCWGG 7 cut(s) 103, 341, 346, 455, 488, 1163, 1599
BseDI CCNNGG 5 cut(s) 101, 246, 487, 1162, 1957
BseGI GGATG 4 cut(s) 354, 576, 1586, 1888
BseLI CCNNNNNNNGG 4 cut(s) 186, 390, 1289, 1659
BseMII CTCAG 1 cut(s) 590
BseNI ACTGG 5 cut(s) 323, 1044, 1338, 1792, 2034
BseRI GAGGAG 2 cut(s) 228, 375
BseXI GCAGC 6 cut(s) 187, 364, 957, 1066, 1378, 1978
BseYI CCCAGC 1 cut(s) 355
Bsh1236I CGCG 2 cut(s) 577, 906
BshFI GGCC 4 cut(s) 344, 420, 1814, 2112
BshNI GGYRCC 3 cut(s) 94, 310, 491
BsiSI CCGG 7 cut(s) 248, 289, 390, 421, 1476, 1888, 2116
BslFI GGGAC 3 cut(s) 437, 703, 1181
BslI CCNNNNNNNGG 4 cut(s) 186, 390, 1289, 1659
BsmAI GTCTC 2 cut(s) 34, 1203
BsmFI GGGAC 3 cut(s) 437, 703, 1181
BsnI GGCC 4 cut(s) 344, 420, 1814, 2112
Bsp119I TTCGAA 1 cut(s) 2000
Bsp13I TCCGGA 1 cut(s) 288
Bsp143I GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
BspACI CCGC 9 cut(s) 180, 203, 224, 308, 526, 776, 810, 1054, 1485
BspANI GGCC 4 cut(s) 344, 420, 1814, 2112
BspCNI CTCAG 1 cut(s) 591
BspEI TCCGGA 1 cut(s) 288
BspFNI CGCG 2 cut(s) 577, 906
BspLI GGNNCC 6 cut(s) 96, 312, 493, 1338, 1348, 1815
BspMAI CTGCAG 1 cut(s) 1288
BspMI ACCTGC 1 cut(s) 241
BspPI GGATC 4 cut(s) 401, 1341, 1354, 2162
BspT104I TTCGAA 1 cut(s) 2000
BspT107I GGYRCC 3 cut(s) 94, 310, 491
BsrFI RCCGGY 1 cut(s) 2115
BsrI ACTGG 5 cut(s) 323, 1044, 1338, 1792, 2034
BssAI RCCGGY 1 cut(s) 2115
BssECI CCNNGG 5 cut(s) 101, 246, 487, 1162, 1957
BssMI GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
BssNI GRCGYC 3 cut(s) 190, 206, 311
BssT1I CCWWGG 1 cut(s) 1957
Bst2UI CCWGG 7 cut(s) 103, 341, 346, 455, 488, 1163, 1599
Bst4CI ACNGT 8 cut(s) 26, 593, 817, 1399, 1698, 1992, 2164, 2244
Bst6I CTCTTC 1 cut(s) 722
BstACI GRCGYC 3 cut(s) 190, 206, 311
BstAPI GCANNNNNTGC 1 cut(s) 967
BstBI TTCGAA 1 cut(s) 2000
BstC8I GCNNGC 2 cut(s) 1812, 2089
BstDEI CTNAG 3 cut(s) 599, 674, 1202
BstEII GGTNACC 1 cut(s) 1471
BstENI CCTNNNNNAGG 2 cut(s) 1287, 1657
BstF5I GGATG 4 cut(s) 354, 576, 1586, 1888
BstFNI CGCG 2 cut(s) 577, 906
BstH2I RGCGCY 1 cut(s) 314
BstHHI GCGC 3 cut(s) 313, 906, 1208
BstKTI GATC 9 cut(s) 396, 566, 655, 673, 736, 822, 1228, 1349, 2170
BstMAI GTCTC 2 cut(s) 34, 1203
BstMBI GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
BstMWI GCNNNNNNNGC 7 cut(s) 124, 967, 1088, 1214, 1269, 1372, 2057
BstNI CCWGG 7 cut(s) 103, 341, 346, 455, 488, 1163, 1599
BstPI GGTNACC 1 cut(s) 1471
BstSFI CTRYAG 3 cut(s) 937, 1284, 2240
BstUI CGCG 2 cut(s) 577, 906
BstV1I GCAGC 6 cut(s) 187, 364, 957, 1066, 1378, 1978
BstV2I GAAGAC 2 cut(s) 358, 954
BstX2I RGATCY 3 cut(s) 563, 733, 1346
BstYI RGATCY 3 cut(s) 563, 733, 1346
BsuI GTATCC 2 cut(s) 1043, 1746
BsuRI GGCC 4 cut(s) 344, 420, 1814, 2112
BtsCI GGATG 4 cut(s) 354, 576, 1586, 1888
BtsI GCAGTG 1 cut(s) 113
BtsIMutI CAGTG 6 cut(s) 22, 113, 822, 829, 1051, 2041
BveI ACCTGC 1 cut(s) 241
Cac8I GCNNGC 2 cut(s) 1812, 2089
CaiI CAGNNNCTG 1 cut(s) 1145
CfoI GCGC 3 cut(s) 313, 906, 1208
Cfr10I RCCGGY 1 cut(s) 2115
Cfr13I GGNCC 5 cut(s) 321, 418, 451, 1478, 1813
CseI GACGC 5 cut(s) 179, 195, 289, 388, 583
Csp6I GTAC 6 cut(s) 218, 316, 1099, 1186, 1929, 2134
CviAII CATG 3 cut(s) 47, 186, 1743
CviQI GTAC 6 cut(s) 218, 316, 1099, 1186, 1929, 2134
DdeI CTNAG 3 cut(s) 599, 674, 1202
DinI GGCGCC 1 cut(s) 312
DpnI GATC 9 cut(s) 395, 565, 654, 672, 735, 821, 1227, 1348, 2169
DpnII GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
DraI TTTAAA 1 cut(s) 982
DrdI GACNNNNNNGTC 2 cut(s) 335, 697
DseDI GACNNNNNNGTC 2 cut(s) 335, 697
EaeI YGGCCR 1 cut(s) 2110
Eam1104I CTCTTC 1 cut(s) 722
EarI CTCTTC 1 cut(s) 722
EciI GGCGGA 1 cut(s) 825
Eco130I CCWWGG 1 cut(s) 1957
Eco47I GGWCC 3 cut(s) 321, 451, 1478
Eco57I CTGAAG 2 cut(s) 391, 1308
Eco91I GGTNACC 1 cut(s) 1471
EcoNI CCTNNNNNAGG 2 cut(s) 1287, 1657
EcoO109I RGGNCCY 1 cut(s) 1813
EcoO65I GGTNACC 1 cut(s) 1471
EcoRI GAATTC 2 cut(s) 507, 621
EcoRII CCWGG 7 cut(s) 101, 339, 344, 453, 486, 1161, 1597
EcoT14I CCWWGG 1 cut(s) 1957
EgeI GGCGCC 1 cut(s) 312
EheI GGCGCC 1 cut(s) 312
ErhI CCWWGG 1 cut(s) 1957
FaeI CATG 3 cut(s) 50, 189, 1746
FalI AAGNNNNNCTT 2 cut(s) 1563, 1595
FaqI GGGAC 3 cut(s) 437, 703, 1181
FatI CATG 3 cut(s) 46, 185, 1742
FauI CCCGC 2 cut(s) 519, 1478
FbaI TGATCA 1 cut(s) 819
Fnu4HI GCNGC 9 cut(s) 180, 201, 204, 309, 353, 971, 1080, 1367, 1967
FokI GGATG 4 cut(s) 361, 583, 1573, 1895
Fsp4HI GCNGC 9 cut(s) 180, 201, 204, 309, 353, 971, 1080, 1367, 1967
FspBI CTAG 4 cut(s) 86, 794, 1482, 1944
GlaI GCGC 3 cut(s) 312, 905, 1207
GluI GCNGC 9 cut(s) 180, 201, 204, 309, 353, 971, 1080, 1367, 1967
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 2 cut(s) 1355, 1581
HaeII RGCGCY 1 cut(s) 314
HaeIII GGCC 4 cut(s) 344, 420, 1814, 2112
HapII CCGG 7 cut(s) 248, 289, 390, 421, 1476, 1888, 2116
HgaI GACGC 5 cut(s) 179, 195, 289, 388, 583
HhaI GCGC 3 cut(s) 313, 906, 1208
Hin1I GRCGYC 3 cut(s) 190, 206, 311
Hin1II CATG 3 cut(s) 50, 189, 1746
Hin6I GCGC 3 cut(s) 311, 904, 1206
HinP1I GCGC 3 cut(s) 311, 904, 1206
HinfI GANTC 7 cut(s) 212, 294, 363, 923, 1462, 1911, 2027
HpaII CCGG 7 cut(s) 248, 289, 390, 421, 1476, 1888, 2116
HphI GGTGA 6 cut(s) 859, 956, 1033, 1247, 1483, 2086
Hpy166II GTNNAC 1 cut(s) 1186
Hpy188I TCNGA 6 cut(s) 211, 271, 328, 513, 1279, 2172
Hpy8I GTNNAC 1 cut(s) 1186
Hpy99I CGWCG 3 cut(s) 195, 332, 404
HpyAV CCTTC 5 cut(s) 295, 380, 831, 1283, 1694
HpyCH4III ACNGT 8 cut(s) 26, 593, 817, 1399, 1698, 1992, 2164, 2244
HpyCH4IV ACGT 2 cut(s) 78, 1553
HpyF10VI GCNNNNNNNGC 7 cut(s) 124, 967, 1088, 1214, 1269, 1372, 2057
HpyF3I CTNAG 3 cut(s) 599, 674, 1202
HpySE526I ACGT 2 cut(s) 78, 1553
Hsp92I GRCGYC 3 cut(s) 190, 206, 311
Hsp92II CATG 3 cut(s) 50, 189, 1746
HspAI GCGC 3 cut(s) 311, 904, 1206
KasI GGCGCC 1 cut(s) 310
Kpn2I TCCGGA 1 cut(s) 288
Ksp22I TGATCA 1 cut(s) 819
Kzo9I GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
LmnI GCTCC 4 cut(s) 241, 457, 1096, 1336
Lsp1109I GCAGC 6 cut(s) 187, 364, 957, 1066, 1378, 1978
LweI GCATC 3 cut(s) 339, 1797, 2100
MaeI CTAG 4 cut(s) 86, 794, 1482, 1944
MaeII ACGT 2 cut(s) 78, 1553
MaeIII GTNAC 7 cut(s) 20, 74, 593, 749, 847, 1412, 1471
MalI GATC 9 cut(s) 395, 565, 654, 672, 735, 821, 1227, 1348, 2169
MboI GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
MfeI CAATTG 3 cut(s) 473, 1007, 1727
MflI RGATCY 3 cut(s) 563, 733, 1346
MlsI TGGCCA 1 cut(s) 2112
MluI ACGCGT 1 cut(s) 575
MluNI TGGCCA 1 cut(s) 2112
Mly113I GGCGCC 1 cut(s) 311
MlyI GAGTC 2 cut(s) 206, 372
MmeI TCCRAC 4 cut(s) 234, 266, 351, 2195
Mox20I TGGCCA 1 cut(s) 2112
MroI TCCGGA 1 cut(s) 288
MroXI GAANNNNTTC 1 cut(s) 1578
MscI TGGCCA 1 cut(s) 2112
MseI TTAA 8 cut(s) 81, 710, 854, 981, 1131, 1152, 1317, 1508
MslI CAYNNNNRTG 1 cut(s) 1833
Msp20I TGGCCA 1 cut(s) 2112
MspA1I CMGCKG 3 cut(s) 355, 778, 1328
MspI CCGG 7 cut(s) 248, 289, 390, 421, 1476, 1888, 2116
MunI CAATTG 3 cut(s) 473, 1007, 1727
MvaI CCWGG 7 cut(s) 103, 341, 346, 455, 488, 1163, 1599
MvnI CGCG 2 cut(s) 577, 906
MwoI GCNNNNNNNGC 7 cut(s) 124, 967, 1088, 1214, 1269, 1372, 2057
NarI GGCGCC 1 cut(s) 311
NciI CCSGG 3 cut(s) 248, 391, 422
NdeII GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
NlaIII CATG 3 cut(s) 50, 189, 1746
NlaIV GGNNCC 6 cut(s) 96, 312, 493, 1338, 1348, 1815
NmeAIII GCCGAG 1 cut(s) 20
NmuCI GTSAC 4 cut(s) 20, 74, 847, 1471
NspV TTCGAA 1 cut(s) 2000
PaqCI CACCTGC 1 cut(s) 241
PcsI WCGNNNNNNNCGW 1 cut(s) 2052
PdmI GAANNNNTTC 1 cut(s) 1578
PfeI GAWTC 5 cut(s) 294, 923, 1462, 1911, 2027
PflFI GACNNNGTC 1 cut(s) 335
PkrI GCNGC 9 cut(s) 181, 202, 205, 310, 354, 972, 1081, 1368, 1968
PleI GAGTC 2 cut(s) 206, 371
PluTI GGCGCC 1 cut(s) 314
PpsI GAGTC 2 cut(s) 206, 371
PshBI ATTAAT 1 cut(s) 1131
PsiI TTATAA 1 cut(s) 1668
Psp6I CCWGG 7 cut(s) 101, 339, 344, 453, 486, 1161, 1597
PspEI GGTNACC 1 cut(s) 1471
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 7 cut(s) 101, 339, 344, 453, 486, 1161, 1597
PspN4I GGNNCC 6 cut(s) 96, 312, 493, 1338, 1348, 1815
PspPI GGNCC 5 cut(s) 321, 418, 451, 1478, 1813
PstI CTGCAG 1 cut(s) 1288
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 3 cut(s) 563, 733, 1346
PsyI GACNNNGTC 1 cut(s) 335
PvuII CAGCTG 2 cut(s) 355, 1328
RsaI GTAC 6 cut(s) 219, 317, 1100, 1187, 1930, 2135
RsaNI GTAC 6 cut(s) 218, 316, 1099, 1186, 1929, 2134
RseI CAYNNNNRTG 1 cut(s) 1833
SaqAI TTAA 8 cut(s) 81, 710, 854, 981, 1131, 1152, 1317, 1508
SatI GCNGC 9 cut(s) 180, 201, 204, 309, 353, 971, 1080, 1367, 1967
Sau3AI GATC 9 cut(s) 393, 563, 652, 670, 733, 819, 1225, 1346, 2167
Sau96I GGNCC 5 cut(s) 321, 418, 451, 1478, 1813
SchI GAGTC 2 cut(s) 206, 372
SfaNI GCATC 3 cut(s) 339, 1797, 2100
SfcI CTRYAG 3 cut(s) 937, 1284, 2240
SfoI GGCGCC 1 cut(s) 312
SfuI TTCGAA 1 cut(s) 2000
SgrAI CRCCGGYG 1 cut(s) 2115
SinI GGWCC 3 cut(s) 321, 451, 1478
SmiMI CAYNNNNRTG 1 cut(s) 1833
SmlI CTYRAG 1 cut(s) 1031
SmoI CTYRAG 1 cut(s) 1031
SpeI ACTAGT 1 cut(s) 85
SsiI CCGC 9 cut(s) 180, 203, 224, 308, 526, 776, 810, 1054, 1485
SspDI GGCGCC 1 cut(s) 310
SspMI CTAG 4 cut(s) 86, 794, 1482, 1944
StyI CCWWGG 1 cut(s) 1957
TaaI ACNGT 8 cut(s) 26, 593, 817, 1399, 1698, 1992, 2164, 2244
TaiI ACGT 2 cut(s) 81, 1556
TaqI TCGA 6 cut(s) 803, 910, 1228, 1614, 2000, 2166
TatI WGTACW 2 cut(s) 1098, 1928
TauI GCSGC 3 cut(s) 182, 206, 311
TfiI GAWTC 5 cut(s) 294, 923, 1462, 1911, 2027
Tru1I TTAA 8 cut(s) 81, 710, 854, 981, 1131, 1152, 1317, 1508
Tru9I TTAA 8 cut(s) 81, 710, 854, 981, 1131, 1152, 1317, 1508
TscAI CASTG 6 cut(s) 29, 120, 822, 829, 1051, 2041
TseFI GTSAC 4 cut(s) 20, 74, 847, 1471
TseI GCWGC 6 cut(s) 200, 352, 970, 1079, 1366, 1966
Tsp45I GTSAC 4 cut(s) 20, 74, 847, 1471
TspDTI ATGAA 5 cut(s) 174, 969, 1584, 1950, 2040
TspGWI ACGGA 2 cut(s) 142, 1871
TspRI CASTG 6 cut(s) 29, 120, 822, 829, 1051, 2041
Tth111I GACNNNGTC 1 cut(s) 335
VpaK11BI GGWCC 3 cut(s) 321, 451, 1478
VspI ATTAAT 1 cut(s) 1131
XagI CCTNNNNNAGG 2 cut(s) 1287, 1657
XapI RAATTY 5 cut(s) 507, 621, 1068, 1238, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 352
XmnI GAANNNNTTC 1 cut(s) 1578
XspI CTAG 4 cut(s) 86, 794, 1482, 1944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.