Rw0G005540

ABC transporter D family member 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00221
OG0001312
Physical Location & Seq
Forward (+)
2611 .. 7951
5341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G005540.1

Sequence Viewer

Length: 2133 bp
ATGATAATACAGGCGCAGAGTCACTGTTTCTCACCCTGCTTGGCTCATGGCTACTCTACCCACCACTCCCATCGTCACTTTACACTAGTAGTCGCACCACCCAGGTTTCCATCACTGCCCACAATGCCCACCACCACTCGCAACCGAAACTCCGTTAGAAGAAGAAGAAACGACGCCGCTTCATGGCGTCGTTCTGCCGCGGCGTCCGACTCTGTACCACCGCCACCACCTGCTCCTCCAACCCCGGAAAAGCAAAGAGAGGGTTCGGATTTGCAGACGCTGCTCCGGAGATTCTGGAAGGTGGCGGCGCCGTACTGGTCCTCCGACGACAAAGTCCAGGCCAGGATGCAGCTGGGAGGAGTCTTCCTTCTCACTCTCGCCACCACCGGGATCAGCGTCGGCTTCAGTTTTCTGGGCCGGGACTTCTACAATGCTCTTGCCAATAAGGACCAGGAGCAATTCACGAAGCAATTGCTTTACTACCTGGGTGCCTTTGCTGGTGGAATTCCGATTTTTGTGTTGCGGGATTATGCAAGAGAAACTCTTTCTTTGAGGTGGAGATCTTGGATGACGCGTTATTACATTGACCGTTACCTGAGCAACCAAACATTTTACAGAATTCAATCCCAATCAATCATTGATAATCCAGATCAGCGAATTGTTGATGATCTAAGTTCTTTCACGGGGACAGCTCTGTCATTCTCTTTAACACTCTTCAATGCTGTGATAGATCTCATATCATTCAGTAACATCTTATTTGGTATCTATCCTCCGCTGTTTGTTGTTCTAGTATTTCGATTGGGTTTGGTGACATTAAACTTCCTGCAAGAGAAAAAGGAAGCAGATTTTCCTTTCTATAGTGGTGAAGACAATGAAATGCAACTTTTGCTGCAACACTTCAAAAGTGCTTTTAAGAATCTAACTCAATTGTTGATAGCTTCAAGAAATCTTGAGTTTTTCACCAGTGGATACCGCTATCTTATTCAAATTCTTCCTGCTGCTGTCGTTGCTCCTATGTACTTCTCTGGAAAAATTGAGTTTGGTGTCATTAATCAGTCAGTATCTGCTTTTAATCATATCCTGGGGGACTTCTCCCTTATCGTGTACCAATTTCAGTCTATAAGCGCATTTTCAGCAGTAATTGATCGACTTGGTGAATTTGATGATTATTTGGATATTTGCTCTCAACGCCATTCTGACCCTGCAGAAGGGATAAGTCTTACATATAGTAATGTTAAAACTTCAGCTGAACTGGAGCCAAATGGATCCATACCCATAGATAAGCAACAAAAGCTACTGGATATAGAGAATTTGACTGTGAAAACACCAAGTAACACTACACTGGTCAGGGATTTGTCATTGGTAATCAACAACAACGAGAATCTATTGGTGACCGGACCTAGCGGGAGTGGTAAGACTTCTTTGTTAAGAACTTTGGCTGGTCTTTGGAGTGCTGGAAAAGGAAAAATCACATTCTATGTAGAAGATGAAGAAGAACTTCTACCATCCAATTCTCCAGGTGTAGTTCCTCTTGATACTGCTAATGATAAATCTGGGGAACTTGAAAGACCCTCAAATAGGAATTATAAGGGCATATTTTTCCTTCCTCAAAGACCATATATGGTTCTGGGAACACTTCGTCAGCAATTGCTGTATCCTACATGGGCTAATGATGAGGCTTCCACATTAGACACTACTAAACCAACTGGTATGTTCTCTGCCTTTCTTGATGCAAACTCACAGCATAAGAGTGCAAAGCCTAAACCCACAACGGAGGATATGATACAGGTTTTGGAGGATGTCCGGCTTGGCTATATATTATCCCGATTCAGTAATTTGGATTGTACTTATGAATGGTCTAGTGTCCTCTCCCTTGGAGAGCAGCAACGCCTTGCTTTTGCACGACTGTTGCTTTCGAAACCAAAGGTGGTTCTTTTAGATGAATCTACCAGTGCTTTAGATGAAGCCAACGAGGCTCATCTATACAAGCAGATAGAAAGAGCAGGCATCACCTATATTAGCATTGGCCACCGGCGAACTCTATATCATGATCCGACCAACGCCCAACAGAATTGGCTCATTGAACCCATCAATCAAGACAATTTGTATAATCTCTCAAATCTACAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

710

Amino Acids

80.15

Weight (kDa)

6.52

Isoelectric Point (pI)

44.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 112 - 275 2.9e-27 ABC transporter transmembrane region 2
SbmA_BacA PF05992 263 - 389 5.1e-06 SbmA/BacA-like family
ABC_tran PF00005 450 - 651 1.8e-17 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1587
AarI CACCTGC 1 cut(s) 238
AasI GACNNNNNNGTC 2 cut(s) 332, 694
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 2 cut(s) 307, 488
AccII CGCG 2 cut(s) 200, 574
AccIII TCCGGA 1 cut(s) 285
AciI CCGC 9 cut(s) 177, 198, 200, 221, 305, 523, 773, 973, 1404
AclWI GGATC 4 cut(s) 398, 1260, 1273, 2045
AcoI YGGCCR 1 cut(s) 2026
AcsI RAATTY 5 cut(s) 504, 618, 987, 1157, 1309
AcuI CTGAAG 2 cut(s) 388, 1227
AcyI GRCGYC 4 cut(s) 174, 187, 203, 308
AfaI GTAC 5 cut(s) 216, 314, 1019, 1106, 1846
AfiI CCNNNNNNNGG 4 cut(s) 183, 387, 1208, 1578
AflIII ACRYGT 1 cut(s) 572
AgsI TTSAA 7 cut(s) 623, 718, 901, 942, 986, 1565, 2084
AhlI ACTAGT 1 cut(s) 85
AjnI CCWGG 7 cut(s) 101, 336, 341, 450, 483, 1080, 1516
AluBI AGCT 5 cut(s) 352, 692, 938, 1247, 1294
AluI AGCT 5 cut(s) 352, 692, 938, 1247, 1294
AlwI GGATC 4 cut(s) 398, 1260, 1273, 2045
AlwNI CAGNNNCTG 2 cut(s) 280, 1064
Aor13HI TCCGGA 1 cut(s) 285
AoxI GGCC 3 cut(s) 339, 415, 2026
ApeKI GCWGC 5 cut(s) 280, 349, 889, 998, 1882
ApoI RAATTY 5 cut(s) 504, 618, 987, 1157, 1309
AseI ATTAAT 1 cut(s) 1050
Asp700I GAANNNNTTC 1 cut(s) 1497
AspLEI GCGC 3 cut(s) 16, 310, 1127
AspS9I GGNCC 4 cut(s) 318, 415, 448, 1397
AsuC2I CCSGG 3 cut(s) 245, 388, 419
AsuHPI GGTGA 7 cut(s) 24, 820, 875, 952, 1166, 1402, 2002
AsuII TTCGAA 1 cut(s) 1916
AvaII GGWCC 3 cut(s) 318, 448, 1397
BalI TGGCCA 1 cut(s) 2028
BamHI GGATCC 1 cut(s) 1265
BanI GGYRCC 2 cut(s) 307, 488
BarI GAAGNNNNNNTAC 2 cut(s) 1485, 1517
BbsI GAAGAC 2 cut(s) 355, 873
BbvI GCAGC 5 cut(s) 267, 361, 876, 985, 1894
BccI CCATC 4 cut(s) 78, 118, 1513, 2096
BceAI ACGGC 1 cut(s) 295
BcgI CGANNNNNNTGC 2 cut(s) 454, 488
BciT130I CCWGG 7 cut(s) 103, 338, 343, 452, 485, 1082, 1518
BciVI GTATCC 2 cut(s) 962, 1665
BcnI CCSGG 3 cut(s) 245, 388, 419
BcuI ACTAGT 1 cut(s) 85
BfaI CTAG 4 cut(s) 86, 788, 1401, 1860
BfmI CTRYAG 3 cut(s) 856, 1203, 2123
BfoI RGCGCY 1 cut(s) 311
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 2 cut(s) 962, 1665
BglI GCCNNNNNGGC 1 cut(s) 1973
BglII AGATCT 2 cut(s) 560, 730
BisI GCNGC 9 cut(s) 177, 198, 201, 281, 306, 350, 890, 999, 1883
BlsI GCNGC 9 cut(s) 178, 199, 202, 282, 307, 351, 891, 1000, 1884
Bme18I GGWCC 3 cut(s) 318, 448, 1397
BmgT120I GGNCC 4 cut(s) 318, 415, 448, 1397
BmiI GGNNCC 4 cut(s) 309, 490, 1257, 1267
BmsI GCATC 3 cut(s) 336, 1720, 2016
BpiI GAAGAC 2 cut(s) 355, 873
BpmI CTGGAG 2 cut(s) 1274, 1500
Bpu10I CCTNAGC 1 cut(s) 596
Bpu14I TTCGAA 1 cut(s) 1916
BpuEI CTTGAG 1 cut(s) 971
BpuMI CCSGG 3 cut(s) 245, 388, 419
BsaHI GRCGYC 4 cut(s) 174, 187, 203, 308
BsaJI CCNNGG 6 cut(s) 101, 198, 243, 484, 1081, 1873
BsaWI WCCGGW 2 cut(s) 285, 1394
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 305, 335
Bsc4I CCNNNNNNNGG 4 cut(s) 183, 387, 1208, 1578
Bse118I RCCGGY 1 cut(s) 2031
Bse1I ACTGG 7 cut(s) 320, 963, 1257, 1302, 1347, 1711, 1950
BseAI TCCGGA 1 cut(s) 285
BseBI CCWGG 7 cut(s) 103, 338, 343, 452, 485, 1082, 1518
BseDI CCNNGG 6 cut(s) 101, 198, 243, 484, 1081, 1873
BseGI GGATG 4 cut(s) 351, 573, 1505, 1804
BseLI CCNNNNNNNGG 4 cut(s) 183, 387, 1208, 1578
BseMII CTCAG 1 cut(s) 587
BseNI ACTGG 7 cut(s) 320, 963, 1257, 1302, 1347, 1711, 1950
BseRI GAGGAG 2 cut(s) 225, 372
BseXI GCAGC 5 cut(s) 267, 361, 876, 985, 1894
BseYI CCCAGC 1 cut(s) 352
Bsh1236I CGCG 2 cut(s) 200, 574
BshFI GGCC 3 cut(s) 341, 417, 2028
BshNI GGYRCC 2 cut(s) 307, 488
BsiSI CCGG 7 cut(s) 245, 286, 387, 418, 1395, 1804, 2032
BslFI GGGAC 3 cut(s) 434, 700, 1100
BslI CCNNNNNNNGG 4 cut(s) 183, 387, 1208, 1578
BsmFI GGGAC 3 cut(s) 434, 700, 1100
BsnI GGCC 3 cut(s) 341, 417, 2028
Bsp119I TTCGAA 1 cut(s) 1916
Bsp13I TCCGGA 1 cut(s) 285
Bsp143I GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
BspACI CCGC 9 cut(s) 177, 198, 200, 221, 305, 523, 773, 973, 1404
BspANI GGCC 3 cut(s) 341, 417, 2028
BspCNI CTCAG 1 cut(s) 588
BspEI TCCGGA 1 cut(s) 285
BspFNI CGCG 2 cut(s) 200, 574
BspHI TCATGA 1 cut(s) 2047
BspLI GGNNCC 4 cut(s) 309, 490, 1257, 1267
BspMAI CTGCAG 1 cut(s) 1207
BspMI ACCTGC 1 cut(s) 238
BspPI GGATC 4 cut(s) 398, 1260, 1273, 2045
BspT104I TTCGAA 1 cut(s) 1916
BspT107I GGYRCC 2 cut(s) 307, 488
BsrFI RCCGGY 1 cut(s) 2031
BsrI ACTGG 7 cut(s) 320, 963, 1257, 1302, 1347, 1711, 1950
BssAI RCCGGY 1 cut(s) 2031
BssECI CCNNGG 6 cut(s) 101, 198, 243, 484, 1081, 1873
BssMI GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
BssNI GRCGYC 4 cut(s) 174, 187, 203, 308
BssT1I CCWWGG 1 cut(s) 1873
Bst2UI CCWGG 7 cut(s) 103, 338, 343, 452, 485, 1082, 1518
Bst4CI ACNGT 5 cut(s) 26, 590, 1318, 1908, 2127
Bst6I CTCTTC 1 cut(s) 719
BstACI GRCGYC 4 cut(s) 174, 187, 203, 308
BstAPI GCANNNNNTGC 2 cut(s) 280, 886
BstBI TTCGAA 1 cut(s) 1916
BstC8I GCNNGC 1 cut(s) 2005
BstDEI CTNAG 2 cut(s) 596, 671
BstDSI CCRYGG 1 cut(s) 198
BstEII GGTNACC 1 cut(s) 1390
BstENI CCTNNNNNAGG 2 cut(s) 1206, 1576
BstF5I GGATG 4 cut(s) 351, 573, 1505, 1804
BstFNI CGCG 2 cut(s) 200, 574
BstH2I RGCGCY 1 cut(s) 311
BstHHI GCGC 3 cut(s) 16, 310, 1127
BstKTI GATC 8 cut(s) 393, 563, 652, 670, 733, 1147, 1268, 2053
BstMBI GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
BstMWI GCNNNNNNNGC 8 cut(s) 124, 280, 886, 1007, 1133, 1188, 1291, 1973
BstNI CCWGG 7 cut(s) 103, 338, 343, 452, 485, 1082, 1518
BstPI GGTNACC 1 cut(s) 1390
BstSFI CTRYAG 3 cut(s) 856, 1203, 2123
BstUI CGCG 2 cut(s) 200, 574
BstV1I GCAGC 5 cut(s) 267, 361, 876, 985, 1894
BstV2I GAAGAC 2 cut(s) 355, 873
BstX2I RGATCY 3 cut(s) 560, 730, 1265
BstYI RGATCY 3 cut(s) 560, 730, 1265
BsuI GTATCC 2 cut(s) 962, 1665
BsuRI GGCC 3 cut(s) 341, 417, 2028
BtgI CCRYGG 1 cut(s) 198
BtsCI GGATG 4 cut(s) 351, 573, 1505, 1804
BtsI GCAGTG 1 cut(s) 113
BtsIMutI CAGTG 5 cut(s) 22, 113, 970, 1340, 1957
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 1 cut(s) 2005
CaiI CAGNNNCTG 2 cut(s) 280, 1064
CciI TCATGA 1 cut(s) 2047
CfoI GCGC 3 cut(s) 16, 310, 1127
Cfr10I RCCGGY 1 cut(s) 2031
Cfr13I GGNCC 4 cut(s) 318, 415, 448, 1397
Cfr42I CCGCGG 1 cut(s) 201
CseI GACGC 6 cut(s) 176, 182, 192, 286, 385, 580
Csp6I GTAC 5 cut(s) 215, 313, 1018, 1105, 1845
CviAII CATG 4 cut(s) 47, 183, 1662, 2048
CviQI GTAC 5 cut(s) 215, 313, 1018, 1105, 1845
DdeI CTNAG 2 cut(s) 596, 671
DinI GGCGCC 1 cut(s) 309
DpnI GATC 8 cut(s) 392, 562, 651, 669, 732, 1146, 1267, 2052
DpnII GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
DrdI GACNNNNNNGTC 2 cut(s) 332, 694
DseDI GACNNNNNNGTC 2 cut(s) 332, 694
EaeI YGGCCR 1 cut(s) 2026
Eam1104I CTCTTC 1 cut(s) 719
EarI CTCTTC 1 cut(s) 719
Eco130I CCWWGG 1 cut(s) 1873
Eco47I GGWCC 3 cut(s) 318, 448, 1397
Eco57I CTGAAG 2 cut(s) 388, 1227
Eco91I GGTNACC 1 cut(s) 1390
EcoNI CCTNNNNNAGG 2 cut(s) 1206, 1576
EcoO65I GGTNACC 1 cut(s) 1390
EcoRI GAATTC 2 cut(s) 504, 618
EcoRII CCWGG 7 cut(s) 101, 336, 341, 450, 483, 1080, 1516
EcoT14I CCWWGG 1 cut(s) 1873
EgeI GGCGCC 1 cut(s) 309
EheI GGCGCC 1 cut(s) 309
ErhI CCWWGG 1 cut(s) 1873
FaeI CATG 4 cut(s) 50, 186, 1665, 2051
FalI AAGNNNNNCTT 2 cut(s) 1482, 1514
FaqI GGGAC 3 cut(s) 434, 700, 1100
FatI CATG 4 cut(s) 46, 182, 1661, 2047
FauI CCCGC 2 cut(s) 516, 1397
Fnu4HI GCNGC 9 cut(s) 177, 198, 201, 281, 306, 350, 890, 999, 1883
FokI GGATG 4 cut(s) 358, 580, 1492, 1811
Fsp4HI GCNGC 9 cut(s) 177, 198, 201, 281, 306, 350, 890, 999, 1883
FspBI CTAG 4 cut(s) 86, 788, 1401, 1860
GlaI GCGC 3 cut(s) 15, 309, 1126
GluI GCNGC 9 cut(s) 177, 198, 201, 281, 306, 350, 890, 999, 1883
GsaI CCCAGC 1 cut(s) 356
GsuI CTGGAG 2 cut(s) 1274, 1500
HaeII RGCGCY 1 cut(s) 311
HaeIII GGCC 3 cut(s) 341, 417, 2028
HapII CCGG 7 cut(s) 245, 286, 387, 418, 1395, 1804, 2032
HgaI GACGC 6 cut(s) 176, 182, 192, 286, 385, 580
HhaI GCGC 3 cut(s) 16, 310, 1127
Hin1I GRCGYC 4 cut(s) 174, 187, 203, 308
Hin1II CATG 4 cut(s) 50, 186, 1665, 2051
Hin6I GCGC 3 cut(s) 14, 308, 1125
HinP1I GCGC 3 cut(s) 14, 308, 1125
HinfI GANTC 8 cut(s) 19, 209, 291, 360, 916, 1381, 1827, 1943
HpaII CCGG 7 cut(s) 245, 286, 387, 418, 1395, 1804, 2032
HphI GGTGA 7 cut(s) 24, 820, 875, 952, 1166, 1402, 2002
Hpy166II GTNNAC 1 cut(s) 1105
Hpy188I TCNGA 6 cut(s) 208, 268, 325, 510, 1198, 2055
Hpy8I GTNNAC 1 cut(s) 1105
Hpy99I CGWCG 4 cut(s) 176, 192, 329, 401
HpyAV CCTTC 4 cut(s) 292, 377, 1202, 1613
HpyCH4III ACNGT 5 cut(s) 26, 590, 1318, 1908, 2127
HpyF10VI GCNNNNNNNGC 8 cut(s) 124, 280, 886, 1007, 1133, 1188, 1291, 1973
HpyF3I CTNAG 2 cut(s) 596, 671
Hsp92I GRCGYC 4 cut(s) 174, 187, 203, 308
Hsp92II CATG 4 cut(s) 50, 186, 1665, 2051
HspAI GCGC 3 cut(s) 14, 308, 1125
KasI GGCGCC 1 cut(s) 307
Kpn2I TCCGGA 1 cut(s) 285
KspI CCGCGG 1 cut(s) 201
Kzo9I GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
LmnI GCTCC 5 cut(s) 238, 288, 454, 1015, 1255
Lsp1109I GCAGC 5 cut(s) 267, 361, 876, 985, 1894
LweI GCATC 3 cut(s) 336, 1720, 2016
MaeI CTAG 4 cut(s) 86, 788, 1401, 1860
MaeIII GTNAC 7 cut(s) 20, 74, 590, 746, 808, 1331, 1390
MalI GATC 8 cut(s) 392, 562, 651, 669, 732, 1146, 1267, 2052
MboI GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
MfeI CAATTG 3 cut(s) 470, 926, 1646
MflI RGATCY 3 cut(s) 560, 730, 1265
MlsI TGGCCA 1 cut(s) 2028
MluI ACGCGT 1 cut(s) 572
MluNI TGGCCA 1 cut(s) 2028
Mly113I GGCGCC 1 cut(s) 308
MlyI GAGTC 3 cut(s) 28, 203, 369
MmeI TCCRAC 4 cut(s) 231, 263, 348, 2078
Mox20I TGGCCA 1 cut(s) 2028
MroI TCCGGA 1 cut(s) 285
MroXI GAANNNNTTC 1 cut(s) 1497
MscI TGGCCA 1 cut(s) 2028
MseI TTAA 7 cut(s) 707, 815, 912, 1050, 1071, 1236, 1427
MslI CAYNNNNRTG 1 cut(s) 1749
Msp20I TGGCCA 1 cut(s) 2028
MspA1I CMGCKG 4 cut(s) 200, 352, 775, 1247
MspI CCGG 7 cut(s) 245, 286, 387, 418, 1395, 1804, 2032
MunI CAATTG 3 cut(s) 470, 926, 1646
MvaI CCWGG 7 cut(s) 103, 338, 343, 452, 485, 1082, 1518
MvnI CGCG 2 cut(s) 200, 574
MwoI GCNNNNNNNGC 8 cut(s) 124, 280, 886, 1007, 1133, 1188, 1291, 1973
NarI GGCGCC 1 cut(s) 308
NciI CCSGG 3 cut(s) 245, 388, 419
NdeII GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
NlaIII CATG 4 cut(s) 50, 186, 1665, 2051
NlaIV GGNNCC 4 cut(s) 309, 490, 1257, 1267
NmuCI GTSAC 4 cut(s) 20, 74, 808, 1390
NspV TTCGAA 1 cut(s) 1916
PagI TCATGA 1 cut(s) 2047
PaqCI CACCTGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 1497
PfeI GAWTC 5 cut(s) 291, 916, 1381, 1827, 1943
PflFI GACNNNGTC 1 cut(s) 332
PkrI GCNGC 9 cut(s) 178, 199, 202, 282, 307, 351, 891, 1000, 1884
PleI GAGTC 3 cut(s) 27, 203, 368
PluTI GGCGCC 1 cut(s) 311
PpsI GAGTC 3 cut(s) 27, 203, 368
PshBI ATTAAT 1 cut(s) 1050
PsiI TTATAA 1 cut(s) 1587
Psp6I CCWGG 7 cut(s) 101, 336, 341, 450, 483, 1080, 1516
PspEI GGTNACC 1 cut(s) 1390
PspFI CCCAGC 1 cut(s) 352
PspGI CCWGG 7 cut(s) 101, 336, 341, 450, 483, 1080, 1516
PspN4I GGNNCC 4 cut(s) 309, 490, 1257, 1267
PspPI GGNCC 4 cut(s) 318, 415, 448, 1397
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 280, 1064
PsuI RGATCY 3 cut(s) 560, 730, 1265
PsyI GACNNNGTC 1 cut(s) 332
PvuII CAGCTG 2 cut(s) 352, 1247
RsaI GTAC 5 cut(s) 216, 314, 1019, 1106, 1846
RsaNI GTAC 5 cut(s) 215, 313, 1018, 1105, 1845
RseI CAYNNNNRTG 1 cut(s) 1749
SacII CCGCGG 1 cut(s) 201
SaqAI TTAA 7 cut(s) 707, 815, 912, 1050, 1071, 1236, 1427
SatI GCNGC 9 cut(s) 177, 198, 201, 281, 306, 350, 890, 999, 1883
Sau3AI GATC 8 cut(s) 390, 560, 649, 667, 730, 1144, 1265, 2050
Sau96I GGNCC 4 cut(s) 318, 415, 448, 1397
SchI GAGTC 3 cut(s) 28, 203, 369
SfaNI GCATC 3 cut(s) 336, 1720, 2016
SfcI CTRYAG 3 cut(s) 856, 1203, 2123
SfoI GGCGCC 1 cut(s) 309
Sfr303I CCGCGG 1 cut(s) 201
SfuI TTCGAA 1 cut(s) 1916
SgrAI CRCCGGYG 1 cut(s) 2031
SgrBI CCGCGG 1 cut(s) 201
SinI GGWCC 3 cut(s) 318, 448, 1397
SmiMI CAYNNNNRTG 1 cut(s) 1749
SmlI CTYRAG 1 cut(s) 950
SmoI CTYRAG 1 cut(s) 950
SpeI ACTAGT 1 cut(s) 85
SsiI CCGC 9 cut(s) 177, 198, 200, 221, 305, 523, 773, 973, 1404
SspDI GGCGCC 1 cut(s) 307
SspMI CTAG 4 cut(s) 86, 788, 1401, 1860
StyI CCWWGG 1 cut(s) 1873
TaaI ACNGT 5 cut(s) 26, 590, 1318, 1908, 2127
TaqI TCGA 3 cut(s) 796, 1147, 1916
TatI WGTACW 2 cut(s) 1017, 1844
TauI GCSGC 4 cut(s) 179, 200, 203, 308
TfiI GAWTC 5 cut(s) 291, 916, 1381, 1827, 1943
Tru1I TTAA 7 cut(s) 707, 815, 912, 1050, 1071, 1236, 1427
Tru9I TTAA 7 cut(s) 707, 815, 912, 1050, 1071, 1236, 1427
TscAI CASTG 5 cut(s) 29, 120, 970, 1347, 1957
TseFI GTSAC 4 cut(s) 20, 74, 808, 1390
TseI GCWGC 5 cut(s) 280, 349, 889, 998, 1882
Tsp45I GTSAC 4 cut(s) 20, 74, 808, 1390
TspDTI ATGAA 6 cut(s) 171, 888, 1503, 1866, 1956, 1977
TspGWI ACGGA 2 cut(s) 142, 1787
TspRI CASTG 5 cut(s) 29, 120, 970, 1347, 1957
Tth111I GACNNNGTC 1 cut(s) 332
VpaK11BI GGWCC 3 cut(s) 318, 448, 1397
VspI ATTAAT 1 cut(s) 1050
XagI CCTNNNNNAGG 2 cut(s) 1206, 1576
XapI RAATTY 5 cut(s) 504, 618, 987, 1157, 1309
XcmI CCANNNNNNNNNTGG 1 cut(s) 349
XmnI GAANNNNTTC 1 cut(s) 1497
XspI CTAG 4 cut(s) 86, 788, 1401, 1860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.