MD10G1220200.v1.1

ABC transporter D family member 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0001312
Physical Location & Seq
Forward (+)
31819046 .. 31825529
6484 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1220200.v1.1.491

Sequence Viewer

Length: 2340 bp
ATGGAAAAAATGATTATACAGGTACAACAAACATACTCCGTCTCACTCTGCTCCTCCTCCGCCTATAACTCCGCCAACCGCCGCCGTTGCTGCCTAATTGGAGTGAGAGTGAGCGACGGAGTCGAAAGAGGAGCAACGATGTCGTATGCTAATTGGCTCCTCTTCCCCAGATTTCCATCATTGTCCACCGTGTCCACCACCTGCAGAAGCAGCAGCAATTGGATGATGAGGAGGAGAGAGAGCAGCAACGACGTCGAATCATCATCTTCTTCTTCGAGATCTTCTGGGCGCTGTGCAGCCGCCTCGGGTTCTGCACCGCCGCCGCCAGTTCCGCCAGATACAGAAAAGCAGAGGGAGGTGCCTGAACTGCAGACGCTTCTCCGAAGATTCTGGAAGGTGGCGGCTCCCTATTGGTCCTCCTCCGACAAGGTGCAAGCGAGGATCCAGCTCGCCGTAGTCTTCGCTCTCACTCTCGCCACCACCGGCATCAGCGTCGGCTTCAGTTTCCTCGGCCGCGACTTCTATAACGCCCTTGCCAACAAGAACCAAGAACAATTCACGAAGCAGCTGCTTTACTACTTGGGTGCATTTGCTGTCGGAATTCCGATTTTTGTGTTGCGATATTATGCAAGACAAACTCTTTCGTTGAGGTGGAGAGCTTGGATGACAAAACATTACATGGACCGTTACCTAAGCAACCAAGCCTTTTATAAAATTCAATCCCAATCAATCATTGATAATCCAGATCAGCGCATTGTTGATGATCTAAGTTCGTTCACAGAAACTGCCCTATCCTTCTCCTTAACAATTCTCAATGCTGTGGTAGATCTCATCTCGTTCAGTAATATCTTATTCAGTATCTATCCTCCGCTGTTTGCTGTTCTATTTGTATATTCAATTGGTGGAACAGCTATAAGTATCTATCTTGGAAAGGATTTGGTTTCTTTAAACTTCATGCAAGAGAAAAAGGAAGCTGATTTTCGTTATGGACTTGTGCGCGTCAGAGAAAATGCTGAATCCATTGCTTTCTATAGTGGTGAAGCAAACGAAATGCAACTTTTGCTACAACGCTTCACAAGTGCTTTCAAAAATATGAGTAAATTGTTGATATGTTCAAGAAATCTCGAGGTTTTCACCAGTGGATACAGCTATCTTATTCATATTCTTCCCGCTGCTGTTGTTGCCCCTATGTATTTCTCAGGCAAAATTGAGATGGGTGTCATTGATCAGTCAACATCTGCTTTCAGTCATATTCTTGGAGACTTCTCCCTTATTGTCTACAGAATGGAGACTATCAGTGCATTTGCAGCTGTAATTGATCGACTTGGTGAATTTGATGATCTATTGGATAGCAGCAACTCAGAACGTCATTCTGACCCCTCAGAAGGGATAAGTTTGATACATAGTAACGTCAAAAGCTTACCAGAACTGGAGTCAAATGGATCCATTCCCATAGAAAAGCAACAAAAGTTAGTGGATATAGAGCACTTGACCGTGGAGACTCCAAGTGGTACTGCATTGGTTAGGAATTTATCATTGGTAATCAACAAGAATGAGCATTTATTGGTAACAGGACCAAGTGGGAGTGGTAAAACATCTTTGTTAAGAGCTATGGCTGGTCTTTTTAGTACTGGAAAAGGAAAAATCATTTTCCATGTGAACTACCGAGAAGACAACCAACCATCCATTTCTTCTGATGTAGTAGATCCTGAGGTAGATACTGTTAGTGATAAATATGGGGAACTTCGGAGGCCCTCGAATAGGAATTATAAAGGCATATTTTTCCTTCCTCAAAGACCATATATGGTATTGGGAACACTTCGCCAACAGTTGCTTTATCCTATATGGGCTGAGGATGCAATTTCCACAGCGGACGGTACTAAACCAACTGGGTCACTTCCTTTCTTGACGCAGGAACCAAATTCGAAACATATGAGTGAAAAGCCTAGTAAGCCCACAACGGAGGACCTGATACAGGTTTTGGAGGATGTCCGACTTGGCTATATATTATCCCGATTCAGCAGTTTGGATACTTCATATGAATGGTCTAGTGCTCTCTCCCTTGGAGAGCAGCAACGCCTTGCATTTGCTCGTTTACTGCTTTCGAAACCACGATTGGTTCTACTGGATGAATCTACCAGTGCTTTAGATGAAGCCAATGAGGTTCATATATATCAGCAGATTGAAAAGGCAGGCATAACATATATAAGCGTCGGTCACCGGCAAACTCTATACGACTTCCACAAGAAGAACTTACGGATCTCCACCGCGGAACCCAGTAGCGCCGAACCCAATTGGAGCATTGAATCCATCAATCGAGAAACATTATACAACTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

780

Amino Acids

87.35

Weight (kDa)

6.89

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 143 - 399 7.3e-53 ABC transporter transmembrane region 2
ABC_membrane PF00664 151 - 419 1.6e-06 ABC transporter transmembrane region
SbmA_BacA PF05992 180 - 447 1e-20 SbmA/BacA-like family
ABC_tran PF00005 509 - 714 1.1e-17 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 711, 1770
AarI CACCTGC 1 cut(s) 209
AatII GACGTC 1 cut(s) 255
Acc36I ACCTGC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 358
AccI GTMKAC 1 cut(s) 1278
AccII CGCG 3 cut(s) 516, 999, 2270
AclWI GGATC 6 cut(s) 436, 449, 1437, 1450, 1700, 2267
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 5 cut(s) 600, 714, 1331, 1528, 1921
AcuI CTGAAG 1 cut(s) 484
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 4 cut(s) 24, 1513, 1630, 1879
AfiI CCNNNNNNNGG 4 cut(s) 1385, 1386, 1761, 1975
AgsI TTSAA 6 cut(s) 719, 897, 1087, 1116, 2186, 2306
AjuI GAANNNNNNNTTGG 4 cut(s) 1520, 1552, 2099, 2131
AluBI AGCT 9 cut(s) 448, 568, 659, 911, 974, 1149, 1310, 1419, 1610
AluI AGCT 9 cut(s) 448, 568, 659, 911, 974, 1149, 1310, 1419, 1610
Alw21I GWGCWC 2 cut(s) 1488, 2056
Alw26I GTCTC 4 cut(s) 46, 1254, 1283, 1493
AlwI GGATC 6 cut(s) 436, 449, 1437, 1450, 1700, 2267
AlwNI CAGNNNCTG 1 cut(s) 785
Ama87I CYCGRG 2 cut(s) 304, 1124
AoxI GGCC 2 cut(s) 511, 1751
ApoI RAATTY 5 cut(s) 600, 714, 1331, 1528, 1921
AspLEI GCGC 4 cut(s) 291, 753, 999, 2285
AspS9I GGNCC 5 cut(s) 414, 682, 1574, 1752, 1966
AsuHPI GGTGA 4 cut(s) 1049, 1126, 1340, 2210
AsuII TTCGAA 2 cut(s) 1925, 2105
AvaI CYCGRG 2 cut(s) 304, 1124
AvaII GGWCC 4 cut(s) 414, 682, 1574, 1966
AxyI CCTNAGG 1 cut(s) 1710
BamHI GGATCC 2 cut(s) 441, 1442
BanI GGYRCC 1 cut(s) 358
BbsI GAAGAC 2 cut(s) 451, 1677
Bbv12I GWGCWC 2 cut(s) 1488, 2056
BbvCI CCTCAGC 1 cut(s) 1851
BccI CCATC 4 cut(s) 184, 1207, 1690, 2318
BceAI ACGGC 2 cut(s) 69, 437
BciVI GTATCC 2 cut(s) 1136, 2023
BclI TGATCA 1 cut(s) 1225
BcoDI GTCTC 4 cut(s) 46, 1254, 1283, 1493
BfaI CTAG 2 cut(s) 1947, 2049
BfmI CTRYAG 4 cut(s) 202, 368, 1030, 1279
BfoI RGCGCY 2 cut(s) 292, 2286
BfuAI ACCTGC 1 cut(s) 209
BfuI GTATCC 2 cut(s) 1136, 2023
BglII AGATCT 2 cut(s) 278, 826
BmcAI AGTACT 1 cut(s) 1630
Bme18I GGWCC 4 cut(s) 414, 682, 1574, 1966
BmeT110I CYCGRG 2 cut(s) 304, 1124
BmgT120I GGNCC 5 cut(s) 414, 682, 1574, 1752, 1966
BmiI GGNNCC 7 cut(s) 158, 360, 405, 443, 1444, 1917, 2274
BmrI ACTGGG 2 cut(s) 1899, 2271
BmsI GCATC 2 cut(s) 495, 1846
BmuI ACTGGG 2 cut(s) 1899, 2271
BpiI GAAGAC 2 cut(s) 451, 1677
BpmI CTGGAG 1 cut(s) 1451
Bpu10I CCTNAGC 2 cut(s) 692, 1851
Bpu14I TTCGAA 2 cut(s) 1925, 2105
BsaBI GATNNNNATC 1 cut(s) 175
BsaHI GRCGYC 1 cut(s) 252
BsaJI CCNNGG 5 cut(s) 303, 508, 1494, 2062, 2268
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 4 cut(s) 1385, 1386, 1761, 1975
Bse118I RCCGGY 2 cut(s) 482, 2220
Bse1I ACTGG 8 cut(s) 326, 1137, 1434, 1636, 1894, 2130, 2139, 2277
Bse21I CCTNAGG 1 cut(s) 1710
Bse3DI GCAATG 1 cut(s) 1020
Bse8I GATNNNNATC 1 cut(s) 175
BseDI CCNNGG 5 cut(s) 303, 508, 1494, 2062, 2268
BseGI GGATG 6 cut(s) 228, 669, 1682, 1861, 1993, 2134
BseJI GATNNNNATC 1 cut(s) 175
BseLI CCNNNNNNNGG 4 cut(s) 1385, 1386, 1761, 1975
BseMI GCAATG 1 cut(s) 1020
BseMII CTCAG 5 cut(s) 1212, 1374, 1395, 1701, 1842
BseNI ACTGG 8 cut(s) 326, 1137, 1434, 1636, 1894, 2130, 2139, 2277
BseRI GAGGAG 7 cut(s) 43, 46, 144, 149, 244, 247, 409
BseX3I CGGCCG 1 cut(s) 511
BsgI GTGCAG 2 cut(s) 297, 315
Bsh1236I CGCG 3 cut(s) 516, 999, 2270
Bsh1285I CGRYCG 1 cut(s) 514
BshFI GGCC 2 cut(s) 513, 1753
BshNI GGYRCC 1 cut(s) 358
BsiEI CGRYCG 1 cut(s) 514
BsiHKAI GWGCWC 2 cut(s) 1488, 2056
BsiHKCI CYCGRG 2 cut(s) 304, 1124
BsiSI CCGG 2 cut(s) 483, 2221
BslI CCNNNNNNNGG 4 cut(s) 1385, 1386, 1761, 1975
BsmAI GTCTC 4 cut(s) 46, 1254, 1283, 1493
BsmBI CGTCTC 1 cut(s) 46
BsnI GGCC 2 cut(s) 513, 1753
BsoBI CYCGRG 2 cut(s) 304, 1124
Bsp119I TTCGAA 2 cut(s) 1925, 2105
Bsp1286I GDGCHC 2 cut(s) 1488, 2056
BspANI GGCC 2 cut(s) 513, 1753
BspCNI CTCAG 5 cut(s) 1211, 1373, 1394, 1702, 1843
BspFNI CGCG 3 cut(s) 516, 999, 2270
BspLI GGNNCC 7 cut(s) 158, 360, 405, 443, 1444, 1917, 2274
BspMAI CTGCAG 2 cut(s) 206, 372
BspMI ACCTGC 1 cut(s) 209
BspPI GGATC 6 cut(s) 436, 449, 1437, 1450, 1700, 2267
BspT104I TTCGAA 2 cut(s) 1925, 2105
BspT107I GGYRCC 1 cut(s) 358
BsrDI GCAATG 1 cut(s) 1020
BsrFI RCCGGY 2 cut(s) 482, 2220
BsrI ACTGG 8 cut(s) 326, 1137, 1434, 1636, 1894, 2130, 2139, 2277
BssAI RCCGGY 2 cut(s) 482, 2220
BssECI CCNNGG 5 cut(s) 303, 508, 1494, 2062, 2268
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 1 cut(s) 2062
Bst4CI ACNGT 6 cut(s) 190, 686, 1495, 1723, 1830, 1877
Bst6I CTCTTC 1 cut(s) 167
BstACI GRCGYC 1 cut(s) 252
BstAPI GCANNNNNTGC 1 cut(s) 1060
BstBI TTCGAA 2 cut(s) 1925, 2105
BstC8I GCNNGC 3 cut(s) 435, 450, 2194
BstDEI CTNAG 7 cut(s) 692, 767, 1198, 1360, 1381, 1710, 1851
BstDSI CCRYGG 2 cut(s) 1494, 2268
BstEII GGTNACC 1 cut(s) 2216
BstENI CCTNNNNNAGG 2 cut(s) 1759, 1973
BstF5I GGATG 6 cut(s) 228, 669, 1682, 1861, 1993, 2134
BstFNI CGCG 3 cut(s) 516, 999, 2270
BstH2I RGCGCY 2 cut(s) 292, 2286
BstHHI GCGC 4 cut(s) 291, 753, 999, 2285
BstMAI GTCTC 4 cut(s) 46, 1254, 1283, 1493
BstMCI CGRYCG 1 cut(s) 514
BstPI GGTNACC 1 cut(s) 2216
BstSFI CTRYAG 4 cut(s) 202, 368, 1030, 1279
BstUI CGCG 3 cut(s) 516, 999, 2270
BstV2I GAAGAC 2 cut(s) 451, 1677
BstX2I RGATCY 6 cut(s) 278, 441, 826, 1442, 1705, 2259
BstYI RGATCY 6 cut(s) 278, 441, 826, 1442, 1705, 2259
BstZI CGGCCG 1 cut(s) 511
Bsu36I CCTNAGG 1 cut(s) 1710
BsuI GTATCC 2 cut(s) 1136, 2023
BsuRI GGCC 2 cut(s) 513, 1753
BtgI CCRYGG 2 cut(s) 1494, 2268
BtsCI GGATG 6 cut(s) 228, 669, 1682, 1861, 1993, 2134
BtsIMutI CAGTG 3 cut(s) 1144, 1303, 2146
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 3 cut(s) 435, 450, 2194
CaiI CAGNNNCTG 1 cut(s) 785
CfoI GCGC 4 cut(s) 291, 753, 999, 2285
Cfr10I RCCGGY 2 cut(s) 482, 2220
Cfr13I GGNCC 5 cut(s) 414, 682, 1574, 1752, 1966
Cfr42I CCGCGG 1 cut(s) 2271
CseI GACGC 5 cut(s) 382, 481, 988, 1918, 2200
Csp6I GTAC 4 cut(s) 23, 1512, 1629, 1878
CviAII CATG 3 cut(s) 679, 955, 1655
CviQI GTAC 4 cut(s) 23, 1512, 1629, 1878
DdeI CTNAG 7 cut(s) 692, 767, 1198, 1360, 1381, 1710, 1851
DraI TTTAAA 1 cut(s) 948
EaeI YGGCCR 1 cut(s) 511
EagI CGGCCG 1 cut(s) 511
Eam1104I CTCTTC 1 cut(s) 167
EarI CTCTTC 1 cut(s) 167
EciI GGCGGA 3 cut(s) 49, 61, 321
EclXI CGGCCG 1 cut(s) 511
Eco130I CCWWGG 1 cut(s) 2062
Eco47I GGWCC 4 cut(s) 414, 682, 1574, 1966
Eco52I CGGCCG 1 cut(s) 511
Eco57I CTGAAG 1 cut(s) 484
Eco81I CCTNAGG 1 cut(s) 1710
Eco88I CYCGRG 2 cut(s) 304, 1124
Eco91I GGTNACC 1 cut(s) 2216
EcoNI CCTNNNNNAGG 2 cut(s) 1759, 1973
EcoO109I RGGNCCY 2 cut(s) 1752, 1966
EcoO65I GGTNACC 1 cut(s) 2216
EcoRI GAATTC 1 cut(s) 600
EcoT14I CCWWGG 1 cut(s) 2062
ErhI CCWWGG 1 cut(s) 2062
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 3 cut(s) 682, 958, 1658
FalI AAGNNNNNCTT 2 cut(s) 2237, 2269
FatI CATG 3 cut(s) 678, 954, 1654
FauI CCCGC 1 cut(s) 1177
FauNDI CATATG 2 cut(s) 1932, 2038
FbaI TGATCA 1 cut(s) 1225
FblI GTMKAC 1 cut(s) 1278
FokI GGATG 6 cut(s) 235, 676, 1669, 1868, 2000, 2141
FspBI CTAG 2 cut(s) 1947, 2049
GlaI GCGC 4 cut(s) 290, 752, 998, 2284
GsuI CTGGAG 1 cut(s) 1451
HaeII RGCGCY 2 cut(s) 292, 2286
HaeIII GGCC 2 cut(s) 513, 1753
HapII CCGG 2 cut(s) 483, 2221
HgaI GACGC 5 cut(s) 382, 481, 988, 1918, 2200
HhaI GCGC 4 cut(s) 291, 753, 999, 2285
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 3 cut(s) 682, 958, 1658
Hin6I GCGC 4 cut(s) 289, 751, 997, 2283
HinP1I GCGC 4 cut(s) 289, 751, 997, 2283
HincII GTYRAC 1 cut(s) 1233
HindII GTYRAC 1 cut(s) 1233
HindIII AAGCTT 1 cut(s) 1417
HinfI GANTC 9 cut(s) 120, 257, 387, 1016, 1433, 1501, 2016, 2132, 2306
HpaII CCGG 2 cut(s) 483, 2221
HphI GGTGA 4 cut(s) 1049, 1126, 1340, 2210
Hpy166II GTNNAC 7 cut(s) 186, 195, 777, 1233, 1279, 1660, 2096
Hpy8I GTNNAC 7 cut(s) 186, 195, 777, 1233, 1279, 1660, 2096
Hpy99I CGWCG 5 cut(s) 119, 254, 257, 497, 2216
HpyAV CCTTC 4 cut(s) 388, 805, 1379, 1796
HpyCH4III ACNGT 6 cut(s) 190, 686, 1495, 1723, 1830, 1877
HpyCH4IV ACGT 3 cut(s) 252, 1366, 1410
HpyF3I CTNAG 7 cut(s) 692, 767, 1198, 1360, 1381, 1710, 1851
HpySE526I ACGT 3 cut(s) 252, 1366, 1410
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 3 cut(s) 682, 958, 1658
HspAI GCGC 4 cut(s) 289, 751, 997, 2283
Ksp22I TGATCA 1 cut(s) 1225
KspI CCGCGG 1 cut(s) 2271
LmnI GCTCC 5 cut(s) 56, 131, 162, 409, 2298
LweI GCATC 2 cut(s) 495, 1846
MaeI CTAG 2 cut(s) 1947, 2049
MaeII ACGT 3 cut(s) 252, 1366, 1410
MaeIII GTNAC 5 cut(s) 686, 1406, 1567, 1893, 2216
MfeI CAATTG 3 cut(s) 217, 897, 2293
MflI RGATCY 6 cut(s) 278, 441, 826, 1442, 1705, 2259
MhlI GDGCHC 2 cut(s) 1488, 2056
MlyI GAGTC 3 cut(s) 129, 1442, 1495
MmeI TCCRAC 3 cut(s) 447, 577, 2017
MseI TTAA 3 cut(s) 803, 947, 1604
MslI CAYNNNNRTG 2 cut(s) 1935, 2041
MspA1I CMGCKG 6 cut(s) 568, 871, 1172, 1310, 1871, 2270
MspI CCGG 2 cut(s) 483, 2221
MunI CAATTG 3 cut(s) 217, 897, 2293
MvnI CGCG 3 cut(s) 516, 999, 2270
NdeI CATATG 2 cut(s) 1932, 2038
NlaIII CATG 3 cut(s) 682, 958, 1658
NlaIV GGNNCC 7 cut(s) 158, 360, 405, 443, 1444, 1917, 2274
NmeAIII GCCGAG 1 cut(s) 489
NmuCI GTSAC 2 cut(s) 1893, 2216
NspV TTCGAA 2 cut(s) 1925, 2105
PaeR7I CTCGAG 1 cut(s) 1124
PaqCI CACCTGC 1 cut(s) 209
PfeI GAWTC 6 cut(s) 257, 387, 1016, 2016, 2132, 2306
PflFI GACNNNGTC 1 cut(s) 119
PleI GAGTC 3 cut(s) 128, 1441, 1495
PpsI GAGTC 3 cut(s) 128, 1441, 1495
PpuMI RGGWCCY 1 cut(s) 1966
PsiI TTATAA 2 cut(s) 711, 1770
Psp5II RGGWCCY 1 cut(s) 1966
PspEI GGTNACC 1 cut(s) 2216
PspN4I GGNNCC 7 cut(s) 158, 360, 405, 443, 1444, 1917, 2274
PspPI GGNCC 5 cut(s) 414, 682, 1574, 1752, 1966
PspPPI RGGWCCY 1 cut(s) 1966
PstI CTGCAG 2 cut(s) 206, 372
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 6 cut(s) 278, 441, 826, 1442, 1705, 2259
PsyI GACNNNGTC 1 cut(s) 119
PvuII CAGCTG 2 cut(s) 568, 1310
RsaI GTAC 4 cut(s) 24, 1513, 1630, 1879
RsaNI GTAC 4 cut(s) 23, 1512, 1629, 1878
RseI CAYNNNNRTG 2 cut(s) 1935, 2041
SacII CCGCGG 1 cut(s) 2271
SaqAI TTAA 3 cut(s) 803, 947, 1604
Sau96I GGNCC 5 cut(s) 414, 682, 1574, 1752, 1966
ScaI AGTACT 1 cut(s) 1630
SchI GAGTC 3 cut(s) 129, 1442, 1495
SduI GDGCHC 2 cut(s) 1488, 2056
SfaNI GCATC 2 cut(s) 495, 1846
SfcI CTRYAG 4 cut(s) 202, 368, 1030, 1279
Sfr274I CTCGAG 1 cut(s) 1124
Sfr303I CCGCGG 1 cut(s) 2271
SfuI TTCGAA 2 cut(s) 1925, 2105
SgrBI CCGCGG 1 cut(s) 2271
SinI GGWCC 4 cut(s) 414, 682, 1574, 1966
SlaI CTCGAG 1 cut(s) 1124
SmiMI CAYNNNNRTG 2 cut(s) 1935, 2041
SmlI CTYRAG 1 cut(s) 1124
SmoI CTYRAG 1 cut(s) 1124
SspMI CTAG 2 cut(s) 1947, 2049
StyI CCWWGG 1 cut(s) 2062
TaaI ACNGT 6 cut(s) 190, 686, 1495, 1723, 1830, 1877
TaiI ACGT 3 cut(s) 255, 1369, 1413
TaqI TCGA 9 cut(s) 123, 255, 275, 1125, 1321, 1757, 1925, 2105, 2317
TaqII GACCGA 1 cut(s) 2204
TatI WGTACW 1 cut(s) 1628
TauI GCSGC 6 cut(s) 84, 302, 322, 325, 404, 516
TfiI GAWTC 6 cut(s) 257, 387, 1016, 2016, 2132, 2306
Tru1I TTAA 3 cut(s) 803, 947, 1604
Tru9I TTAA 3 cut(s) 803, 947, 1604
TscAI CASTG 3 cut(s) 1144, 1303, 2146
TseFI GTSAC 2 cut(s) 1893, 2216
Tsp45I GTSAC 2 cut(s) 1893, 2216
TspDTI ATGAA 7 cut(s) 943, 1148, 2025, 2055, 2145, 2156, 2166
TspGWI ACGGA 4 cut(s) 28, 132, 1976, 2272
TspRI CASTG 3 cut(s) 1144, 1303, 2146
Tth111I GACNNNGTC 1 cut(s) 119
VpaK11BI GGWCC 4 cut(s) 414, 682, 1574, 1966
XagI CCTNNNNNAGG 2 cut(s) 1759, 1973
XapI RAATTY 5 cut(s) 600, 714, 1331, 1528, 1921
XhoI CTCGAG 1 cut(s) 1124
XmiI GTMKAC 1 cut(s) 1278
XspI CTAG 2 cut(s) 1947, 2049
ZraI GACGTC 1 cut(s) 253
ZrmI AGTACT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.