pentatricopeptide
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| AccII | CGCG | 1 cut(s) | 1404 |
| AciI | CCGC | 4 cut(s) | 168, 999, 1301, 1637 |
| AclI | AACGTT | 1 cut(s) | 1751 |
| AclWI | GGATC | 6 cut(s) | 150, 302, 1009, 1096, 1311, 1391 |
| AcsI | RAATTY | 2 cut(s) | 774, 1429 |
| AcuI | CTGAAG | 2 cut(s) | 1173, 1490 |
| AfaI | GTAC | 5 cut(s) | 340, 419, 896, 1483, 1571 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 255, 1425 |
| AflII | CTTAAG | 1 cut(s) | 494 |
| AflIII | ACRYGT | 1 cut(s) | 1402 |
| AgsI | TTSAA | 9 cut(s) | 51, 95, 584, 635, 1075, 1123, 1196, 1603, 1651 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 542, 574, 660, 692 |
| Alw26I | GTCTC | 6 cut(s) | 197, 323, 1202, 1343, 1348, 1754 |
| AlwI | GGATC | 6 cut(s) | 150, 302, 1009, 1096, 1311, 1391 |
| Ama87I | CYCGRG | 2 cut(s) | 347, 874 |
| AoxI | GGCC | 1 cut(s) | 377 |
| ApeKI | GCWGC | 5 cut(s) | 164, 485, 575, 1182, 1560 |
| ApoI | RAATTY | 2 cut(s) | 774, 1429 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 149, 1571, 1598, 1721 |
| AspA2I | CCTAGG | 1 cut(s) | 1465 |
| AspS9I | GGNCC | 1 cut(s) | 377 |
| AsuC2I | CCSGG | 2 cut(s) | 182, 376 |
| AsuHPI | GGTGA | 3 cut(s) | 112, 202, 827 |
| AvaI | CYCGRG | 2 cut(s) | 347, 874 |
| AvrII | CCTAGG | 1 cut(s) | 1465 |
| AxyI | CCTNAGG | 1 cut(s) | 254 |
| BanII | GRGCYC | 1 cut(s) | 1846 |
| BbsI | GAAGAC | 3 cut(s) | 43, 78, 142 |
| BbvI | GCAGC | 5 cut(s) | 151, 472, 587, 1194, 1547 |
| BccI | CCATC | 3 cut(s) | 595, 739, 743 |
| BceAI | ACGGC | 1 cut(s) | 1698 |
| BciVI | GTATCC | 1 cut(s) | 1544 |
| BclI | TGATCA | 4 cut(s) | 133, 792, 954, 1542 |
| BcnI | CCSGG | 2 cut(s) | 182, 376 |
| BcoDI | GTCTC | 6 cut(s) | 197, 323, 1202, 1343, 1348, 1754 |
| BfaI | CTAG | 2 cut(s) | 362, 1466 |
| BfrI | CTTAAG | 1 cut(s) | 494 |
| BfuI | GTATCC | 1 cut(s) | 1544 |
| BisI | GCNGC | 6 cut(s) | 165, 168, 486, 576, 1183, 1561 |
| BlnI | CCTAGG | 1 cut(s) | 1465 |
| BlsI | GCNGC | 6 cut(s) | 166, 169, 487, 577, 1184, 1562 |
| BmcAI | AGTACT | 1 cut(s) | 1571 |
| Bme1390I | CCNGG | 2 cut(s) | 182, 376 |
| BmeT110I | CYCGRG | 2 cut(s) | 347, 874 |
| BmgT120I | GGNCC | 1 cut(s) | 377 |
| BmrFI | CCNGG | 2 cut(s) | 182, 376 |
| BmsI | GCATC | 5 cut(s) | 607, 1304, 1462, 1630, 1816 |
| BoxI | GACNNNNGTC | 1 cut(s) | 189 |
| BpiI | GAAGAC | 3 cut(s) | 43, 78, 142 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 30 |
| BpmI | CTGGAG | 2 cut(s) | 1113, 1643 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1080 |
| BpuEI | CTTGAG | 4 cut(s) | 251, 341, 755, 1364 |
| BpuMI | CCSGG | 2 cut(s) | 182, 376 |
| Bsa29I | ATCGAT | 1 cut(s) | 456 |
| BsaAI | YACGTR | 1 cut(s) | 1555 |
| BsaI | GGTCTC | 4 cut(s) | 323, 1202, 1343, 1348 |
| BsaJI | CCNNGG | 1 cut(s) | 1465 |
| BsaWI | WCCGGW | 1 cut(s) | 553 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 206, 236, 389, 419 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 255, 1425 |
| Bse1I | ACTGG | 3 cut(s) | 786, 1339, 1626 |
| Bse21I | CCTNAGG | 1 cut(s) | 254 |
| BseCI | ATCGAT | 1 cut(s) | 456 |
| BseDI | CCNNGG | 1 cut(s) | 1465 |
| BseGI | GGATG | 4 cut(s) | 649, 754, 1500, 1645 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 255, 1425 |
| BseMII | CTCAG | 7 cut(s) | 268, 612, 980, 1094, 1175, 1350, 1789 |
| BseNI | ACTGG | 3 cut(s) | 786, 1339, 1626 |
| BseRI | GAGGAG | 1 cut(s) | 185 |
| BseXI | GCAGC | 5 cut(s) | 151, 472, 587, 1194, 1547 |
| Bsh1236I | CGCG | 1 cut(s) | 1404 |
| BshFI | GGCC | 1 cut(s) | 379 |
| BshVI | ATCGAT | 1 cut(s) | 456 |
| BsiHKCI | CYCGRG | 2 cut(s) | 347, 874 |
| BsiSI | CCGG | 3 cut(s) | 182, 375, 554 |
| BsiWI | CGTACG | 1 cut(s) | 338 |
| BslFI | GGGAC | 1 cut(s) | 1402 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 255, 1425 |
| BsmAI | GTCTC | 6 cut(s) | 197, 323, 1202, 1343, 1348, 1754 |
| BsmBI | CGTCTC | 1 cut(s) | 197 |
| BsmFI | GGGAC | 1 cut(s) | 1402 |
| BsmI | GAATGC | 2 cut(s) | 1081, 1657 |
| BsnI | GGCC | 1 cut(s) | 379 |
| Bso31I | GGTCTC | 4 cut(s) | 323, 1202, 1343, 1348 |
| BsoBI | CYCGRG | 2 cut(s) | 347, 874 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1846 |
| BspACI | CCGC | 4 cut(s) | 168, 999, 1301, 1637 |
| BspANI | GGCC | 1 cut(s) | 379 |
| BspCNI | CTCAG | 7 cut(s) | 267, 613, 979, 1093, 1174, 1351, 1788 |
| BspDI | ATCGAT | 1 cut(s) | 456 |
| BspFNI | CGCG | 1 cut(s) | 1404 |
| BspPI | GGATC | 6 cut(s) | 150, 302, 1009, 1096, 1311, 1391 |
| BspTI | CTTAAG | 1 cut(s) | 494 |
| BspTNI | GGTCTC | 4 cut(s) | 323, 1202, 1343, 1348 |
| BsrI | ACTGG | 3 cut(s) | 786, 1339, 1626 |
| BssECI | CCNNGG | 1 cut(s) | 1465 |
| BssT1I | CCWWGG | 1 cut(s) | 1465 |
| Bst4CI | ACNGT | 4 cut(s) | 334, 343, 846, 899 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 1790 |
| BstAFI | CTTAAG | 1 cut(s) | 494 |
| BstBAI | YACGTR | 1 cut(s) | 1555 |
| BstC8I | GCNNGC | 3 cut(s) | 273, 381, 1629 |
| BstDEI | CTNAG | 8 cut(s) | 32, 254, 621, 966, 1080, 1161, 1359, 1775 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 253 |
| BstF5I | GGATG | 4 cut(s) | 649, 754, 1500, 1645 |
| BstFNI | CGCG | 1 cut(s) | 1404 |
| BstMAI | GTCTC | 6 cut(s) | 197, 323, 1202, 1343, 1348, 1754 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 572, 584, 1140, 1677 |
| BstNSI | RCATGY | 1 cut(s) | 1631 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 189 |
| BstSCI | CCNGG | 2 cut(s) | 180, 374 |
| BstUI | CGCG | 1 cut(s) | 1404 |
| BstV1I | GCAGC | 5 cut(s) | 151, 472, 587, 1194, 1547 |
| BstV2I | GAAGAC | 3 cut(s) | 43, 78, 142 |
| BstX2I | RGATCY | 4 cut(s) | 307, 1088, 1303, 1396 |
| BstYI | RGATCY | 4 cut(s) | 307, 1088, 1303, 1396 |
| Bsu15I | ATCGAT | 1 cut(s) | 456 |
| Bsu36I | CCTNAGG | 1 cut(s) | 254 |
| BsuI | GTATCC | 1 cut(s) | 1544 |
| BsuRI | GGCC | 1 cut(s) | 379 |
| BsuTUI | ATCGAT | 1 cut(s) | 456 |
| BtsCI | GGATG | 4 cut(s) | 649, 754, 1500, 1645 |
| BtsIMutI | CAGTG | 5 cut(s) | 129, 802, 889, 987, 1011 |
| Cac8I | GCNNGC | 3 cut(s) | 273, 381, 1629 |
| Cfr13I | GGNCC | 1 cut(s) | 377 |
| ClaI | ATCGAT | 1 cut(s) | 456 |
| CseI | GACGC | 1 cut(s) | 179 |
| Csp6I | GTAC | 5 cut(s) | 339, 418, 895, 1482, 1570 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 976, 1011 |
| CviAII | CATG | 8 cut(s) | 141, 1237, 1247, 1421, 1442, 1628, 1756, 1857 |
| CviQI | GTAC | 5 cut(s) | 339, 418, 895, 1482, 1570 |
| DdeI | CTNAG | 8 cut(s) | 32, 254, 621, 966, 1080, 1161, 1359, 1775 |
| DraI | TTTAAA | 1 cut(s) | 409 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 1790 |
| EarI | CTCTTC | 2 cut(s) | 52, 1790 |
| EciI | GGCGGA | 2 cut(s) | 1014, 1316 |
| Eco130I | CCWWGG | 1 cut(s) | 1465 |
| Eco24I | GRGCYC | 1 cut(s) | 1846 |
| Eco31I | GGTCTC | 4 cut(s) | 323, 1202, 1343, 1348 |
| Eco57I | CTGAAG | 2 cut(s) | 1173, 1490 |
| Eco81I | CCTNAGG | 1 cut(s) | 254 |
| Eco88I | CYCGRG | 2 cut(s) | 347, 874 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 253 |
| EcoRI | GAATTC | 2 cut(s) | 774, 1429 |
| EcoT14I | CCWWGG | 1 cut(s) | 1465 |
| EcoT22I | ATGCAT | 1 cut(s) | 1657 |
| EcoT38I | GRGCYC | 1 cut(s) | 1846 |
| ErhI | CCWWGG | 1 cut(s) | 1465 |
| Esp3I | CGTCTC | 1 cut(s) | 197 |
| FaeI | CATG | 8 cut(s) | 144, 1240, 1250, 1424, 1445, 1631, 1759, 1860 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 74, 106, 260, 292, 1483, 1515 |
| FaqI | GGGAC | 1 cut(s) | 1402 |
| FatI | CATG | 8 cut(s) | 140, 1236, 1246, 1420, 1441, 1627, 1755, 1856 |
| FbaI | TGATCA | 4 cut(s) | 133, 792, 954, 1542 |
| Fnu4HI | GCNGC | 6 cut(s) | 165, 168, 486, 576, 1183, 1561 |
| FokI | GGATG | 4 cut(s) | 656, 761, 1507, 1652 |
| FriOI | GRGCYC | 1 cut(s) | 1846 |
| Fsp4HI | GCNGC | 6 cut(s) | 165, 168, 486, 576, 1183, 1561 |
| FspBI | CTAG | 2 cut(s) | 362, 1466 |
| GluI | GCNGC | 6 cut(s) | 165, 168, 486, 576, 1183, 1561 |
| GsuI | CTGGAG | 2 cut(s) | 1113, 1643 |
| HaeIII | GGCC | 1 cut(s) | 379 |
| HapII | CCGG | 3 cut(s) | 182, 375, 554 |
| HgaI | GACGC | 1 cut(s) | 179 |
| Hin1II | CATG | 8 cut(s) | 144, 1240, 1250, 1424, 1445, 1631, 1759, 1860 |
| HindIII | AAGCTT | 4 cut(s) | 369, 478, 536, 1230 |
| HpaII | CCGG | 3 cut(s) | 182, 375, 554 |
| HphI | GGTGA | 3 cut(s) | 112, 202, 827 |
| Hpy166II | GTNNAC | 1 cut(s) | 987 |
| Hpy8I | GTNNAC | 1 cut(s) | 987 |
| HpyAV | CCTTC | 9 cut(s) | 52, 139, 169, 235, 700, 1117, 1133, 1485, 1514 |
| HpyCH4III | ACNGT | 4 cut(s) | 334, 343, 846, 899 |
| HpyCH4IV | ACGT | 4 cut(s) | 893, 1203, 1554, 1751 |
| HpyCH4V | TGCA | 7 cut(s) | 524, 575, 764, 1134, 1475, 1655, 1690 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 572, 584, 1140, 1677 |
| HpyF3I | CTNAG | 8 cut(s) | 32, 254, 621, 966, 1080, 1161, 1359, 1775 |
| HpySE526I | ACGT | 4 cut(s) | 893, 1203, 1554, 1751 |
| Hsp92II | CATG | 8 cut(s) | 144, 1240, 1250, 1424, 1445, 1631, 1759, 1860 |
| Ksp22I | TGATCA | 4 cut(s) | 133, 792, 954, 1542 |
| LmnI | GCTCC | 1 cut(s) | 1624 |
| Lsp1109I | GCAGC | 5 cut(s) | 151, 472, 587, 1194, 1547 |
| LweI | GCATC | 5 cut(s) | 607, 1304, 1462, 1630, 1816 |
| MaeI | CTAG | 2 cut(s) | 362, 1466 |
| MaeII | ACGT | 4 cut(s) | 893, 1203, 1554, 1751 |
| MaeIII | GTNAC | 1 cut(s) | 1168 |
| MflI | RGATCY | 4 cut(s) | 307, 1088, 1303, 1396 |
| MhlI | GDGCHC | 1 cut(s) | 1846 |
| MluI | ACGCGT | 1 cut(s) | 1402 |
| MlyI | GAGTC | 4 cut(s) | 7, 258, 359, 1756 |
| MmeI | TCCRAC | 2 cut(s) | 844, 954 |
| Mph1103I | ATGCAT | 1 cut(s) | 1657 |
| MroXI | GAANNNNTTC | 4 cut(s) | 149, 1571, 1598, 1721 |
| MseI | TTAA | 8 cut(s) | 23, 408, 495, 807, 855, 1322, 1364, 1833 |
| MspCI | CTTAAG | 1 cut(s) | 494 |
| MspI | CCGG | 3 cut(s) | 182, 375, 554 |
| MspR9I | CCNGG | 2 cut(s) | 182, 376 |
| Mva1269I | GAATGC | 2 cut(s) | 1081, 1657 |
| MvnI | CGCG | 1 cut(s) | 1404 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 572, 584, 1140, 1677 |
| NciI | CCSGG | 2 cut(s) | 182, 376 |
| NlaIII | CATG | 8 cut(s) | 144, 1240, 1250, 1424, 1445, 1631, 1759, 1860 |
| NsiI | ATGCAT | 1 cut(s) | 1657 |
| NspI | RCATGY | 1 cut(s) | 1631 |
| PaeI | GCATGC | 1 cut(s) | 1631 |
| PaeR7I | CTCGAG | 2 cut(s) | 347, 874 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1560 |
| PctI | GAATGC | 2 cut(s) | 1081, 1657 |
| PdmI | GAANNNNTTC | 4 cut(s) | 149, 1571, 1598, 1721 |
| PfeI | GAWTC | 8 cut(s) | 95, 605, 625, 635, 977, 1017, 1348, 1771 |
| Pfl23II | CGTACG | 1 cut(s) | 338 |
| PfoI | TCCNGGA | 1 cut(s) | 180 |
| PkrI | GCNGC | 6 cut(s) | 166, 169, 487, 577, 1184, 1562 |
| PleI | GAGTC | 4 cut(s) | 7, 258, 358, 1756 |
| PpsI | GAGTC | 4 cut(s) | 7, 258, 358, 1756 |
| Ppu21I | YACGTR | 1 cut(s) | 1555 |
| PshAI | GACNNNNGTC | 1 cut(s) | 189 |
| Psp1406I | AACGTT | 1 cut(s) | 1751 |
| PspLI | CGTACG | 1 cut(s) | 338 |
| PspPI | GGNCC | 1 cut(s) | 377 |
| PspXI | VCTCGAGB | 1 cut(s) | 874 |
| PsuI | RGATCY | 4 cut(s) | 307, 1088, 1303, 1396 |
| RsaI | GTAC | 5 cut(s) | 340, 419, 896, 1483, 1571 |
| RsaNI | GTAC | 5 cut(s) | 339, 418, 895, 1482, 1570 |
| SaqAI | TTAA | 8 cut(s) | 23, 408, 495, 807, 855, 1322, 1364, 1833 |
| SatI | GCNGC | 6 cut(s) | 165, 168, 486, 576, 1183, 1561 |
| Sau96I | GGNCC | 1 cut(s) | 377 |
| ScaI | AGTACT | 1 cut(s) | 1571 |
| SchI | GAGTC | 4 cut(s) | 7, 258, 359, 1756 |
| ScrFI | CCNGG | 2 cut(s) | 182, 376 |
| SduI | GDGCHC | 1 cut(s) | 1846 |
| SfaNI | GCATC | 5 cut(s) | 607, 1304, 1462, 1630, 1816 |
| Sfr274I | CTCGAG | 2 cut(s) | 347, 874 |
| SlaI | CTCGAG | 2 cut(s) | 347, 874 |
| SmlI | CTYRAG | 7 cut(s) | 266, 320, 347, 494, 734, 874, 1343 |
| SmoI | CTYRAG | 7 cut(s) | 266, 320, 347, 494, 734, 874, 1343 |
| SphI | GCATGC | 1 cut(s) | 1631 |
| SsiI | CCGC | 4 cut(s) | 168, 999, 1301, 1637 |
| SspMI | CTAG | 2 cut(s) | 362, 1466 |
| StyD4I | CCNGG | 2 cut(s) | 180, 374 |
| StyI | CCWWGG | 1 cut(s) | 1465 |
| TaaI | ACNGT | 4 cut(s) | 334, 343, 846, 899 |
| TaiI | ACGT | 4 cut(s) | 896, 1206, 1557, 1754 |
| TatI | WGTACW | 2 cut(s) | 1481, 1569 |
| TauI | GCSGC | 1 cut(s) | 170 |
| TfiI | GAWTC | 8 cut(s) | 95, 605, 625, 635, 977, 1017, 1348, 1771 |
| Tru1I | TTAA | 8 cut(s) | 23, 408, 495, 807, 855, 1322, 1364, 1833 |
| Tru9I | TTAA | 8 cut(s) | 23, 408, 495, 807, 855, 1322, 1364, 1833 |
| TscAI | CASTG | 5 cut(s) | 136, 802, 889, 994, 1011 |
| TseI | GCWGC | 5 cut(s) | 164, 485, 575, 1182, 1560 |
| TspDTI | ATGAA | 8 cut(s) | 371, 563, 681, 907, 1083, 1730, 1744, 1820 |
| TspGWI | ACGGA | 1 cut(s) | 326 |
| TspRI | CASTG | 5 cut(s) | 136, 802, 889, 994, 1011 |
| Vha464I | CTTAAG | 1 cut(s) | 494 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 253 |
| XapI | RAATTY | 2 cut(s) | 774, 1429 |
| XceI | RCATGY | 1 cut(s) | 1631 |
| XhoI | CTCGAG | 2 cut(s) | 347, 874 |
| XmaJI | CCTAGG | 1 cut(s) | 1465 |
| XmnI | GAANNNNTTC | 4 cut(s) | 149, 1571, 1598, 1721 |
| XspI | CTAG | 2 cut(s) | 362, 1466 |
| ZrmI | AGTACT | 1 cut(s) | 1571 |
| Zsp2I | ATGCAT | 1 cut(s) | 1657 |