Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1135 |
| Acc65I | GGTACC | 1 cut(s) | 1016 |
| AccB1I | GGYRCC | 1 cut(s) | 1016 |
| AciI | CCGC | 1 cut(s) | 719 |
| AcoI | YGGCCR | 1 cut(s) | 956 |
| AcsI | RAATTY | 5 cut(s) | 899, 1030, 1241, 1524, 1558 |
| AcuI | CTGAAG | 3 cut(s) | 75, 362, 1808 |
| AfaI | GTAC | 5 cut(s) | 1018, 1364, 1607, 1767, 1785 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1026, 1627, 1793 |
| AflIII | ACRYGT | 1 cut(s) | 1780 |
| AjiI | CACGTC | 1 cut(s) | 178 |
| AjnI | CCWGG | 1 cut(s) | 1620 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 55, 87, 617, 649, 735, 767 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1708, 1740 |
| Alw21I | GWGCWC | 1 cut(s) | 1777 |
| Alw26I | GTCTC | 2 cut(s) | 704, 1808 |
| Alw44I | GTGCAC | 1 cut(s) | 1773 |
| AoxI | GGCC | 4 cut(s) | 693, 734, 956, 1534 |
| ApaLI | GTGCAC | 1 cut(s) | 1773 |
| ApeKI | GCWGC | 6 cut(s) | 264, 449, 638, 650, 971, 1745 |
| ApoI | RAATTY | 5 cut(s) | 899, 1030, 1241, 1524, 1558 |
| AseI | ATTAAT | 1 cut(s) | 1142 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 245, 1213 |
| Asp718I | GGTACC | 1 cut(s) | 1016 |
| AspS9I | GGNCC | 2 cut(s) | 693, 997 |
| AsuHPI | GGTGA | 5 cut(s) | 141, 172, 697, 944, 1213 |
| AsuII | TTCGAA | 2 cut(s) | 579, 1969 |
| AvaII | GGWCC | 1 cut(s) | 997 |
| BaeGI | GKGCMC | 1 cut(s) | 1777 |
| BanI | GGYRCC | 1 cut(s) | 1016 |
| BanII | GRGCYC | 1 cut(s) | 1738 |
| BauI | CACGAG | 1 cut(s) | 1905 |
| Bbv12I | GWGCWC | 1 cut(s) | 1777 |
| BbvCI | CCTCAGC | 1 cut(s) | 1467 |
| BbvI | GCAGC | 6 cut(s) | 276, 436, 625, 662, 983, 1732 |
| BccI | CCATC | 7 cut(s) | 121, 607, 814, 961, 1090, 1217, 1690 |
| BciT130I | CCWGG | 1 cut(s) | 1622 |
| BclI | TGATCA | 2 cut(s) | 867, 1246 |
| BcoDI | GTCTC | 2 cut(s) | 704, 1808 |
| BfaI | CTAG | 2 cut(s) | 1067, 1728 |
| BfmI | CTRYAG | 2 cut(s) | 188, 920 |
| BisI | GCNGC | 6 cut(s) | 265, 450, 639, 651, 972, 1746 |
| BlsI | GCNGC | 6 cut(s) | 266, 451, 640, 652, 973, 1747 |
| Bme1390I | CCNGG | 1 cut(s) | 1622 |
| Bme18I | GGWCC | 1 cut(s) | 997 |
| BmgBI | CACGTC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 2 cut(s) | 693, 997 |
| BmiI | GGNNCC | 3 cut(s) | 694, 999, 1018 |
| BmrFI | CCNGG | 1 cut(s) | 1622 |
| BmsI | GCATC | 5 cut(s) | 1063, 1176, 1252, 1291, 1624 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1467 |
| Bpu14I | TTCGAA | 2 cut(s) | 579, 1969 |
| BpuEI | CTTGAG | 2 cut(s) | 1314, 1964 |
| BsaAI | YACGTR | 1 cut(s) | 1783 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1340 |
| BsaI | GGTCTC | 1 cut(s) | 1808 |
| BsaJI | CCNNGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 136, 166 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1026, 1627, 1793 |
| Bse118I | RCCGGY | 1 cut(s) | 954 |
| Bse1I | ACTGG | 2 cut(s) | 747, 1031 |
| Bse3DI | GCAATG | 2 cut(s) | 652, 1871 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1340 |
| BseBI | CCWGG | 1 cut(s) | 1622 |
| BseDI | CCNNGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| BseGI | GGATG | 5 cut(s) | 125, 610, 855, 1101, 1707 |
| BseJI | GATNNNNATC | 1 cut(s) | 1340 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1026, 1627, 1793 |
| BseMI | GCAATG | 2 cut(s) | 652, 1871 |
| BseMII | CTCAG | 2 cut(s) | 1458, 1730 |
| BseNI | ACTGG | 2 cut(s) | 747, 1031 |
| BseRI | GAGGAG | 5 cut(s) | 1093, 1435, 1484, 1526, 1640 |
| BseSI | GKGCMC | 1 cut(s) | 1777 |
| BseXI | GCAGC | 6 cut(s) | 276, 436, 625, 662, 983, 1732 |
| BseYI | CCCAGC | 1 cut(s) | 1058 |
| BshFI | GGCC | 4 cut(s) | 695, 736, 958, 1536 |
| BshNI | GGYRCC | 1 cut(s) | 1016 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1777 |
| BsiSI | CCGG | 2 cut(s) | 629, 955 |
| BslFI | GGGAC | 4 cut(s) | 44, 238, 271, 341 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1026, 1627, 1793 |
| BsmAI | GTCTC | 2 cut(s) | 704, 1808 |
| BsmFI | GGGAC | 4 cut(s) | 44, 238, 271, 341 |
| BsmI | GAATGC | 2 cut(s) | 1265, 1373 |
| BsnI | GGCC | 4 cut(s) | 695, 736, 958, 1536 |
| Bso31I | GGTCTC | 1 cut(s) | 1808 |
| Bsp119I | TTCGAA | 2 cut(s) | 579, 1969 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1738, 1777 |
| Bsp1407I | TGTACA | 1 cut(s) | 1765 |
| Bsp143I | GATC | 2 cut(s) | 867, 1246 |
| Bsp19I | CCATGG | 1 cut(s) | 1609 |
| BspACI | CCGC | 1 cut(s) | 719 |
| BspANI | GGCC | 4 cut(s) | 695, 736, 958, 1536 |
| BspCNI | CTCAG | 2 cut(s) | 1459, 1731 |
| BspLI | GGNNCC | 3 cut(s) | 694, 999, 1018 |
| BspMAI | CTGCAG | 1 cut(s) | 924 |
| BspT104I | TTCGAA | 2 cut(s) | 579, 1969 |
| BspT107I | GGYRCC | 1 cut(s) | 1016 |
| BspTNI | GGTCTC | 1 cut(s) | 1808 |
| BsrDI | GCAATG | 2 cut(s) | 652, 1871 |
| BsrFI | RCCGGY | 1 cut(s) | 954 |
| BsrGI | TGTACA | 1 cut(s) | 1765 |
| BsrI | ACTGG | 2 cut(s) | 747, 1031 |
| BssAI | RCCGGY | 1 cut(s) | 954 |
| BssECI | CCNNGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| BssMI | GATC | 2 cut(s) | 867, 1246 |
| BssSI | CACGAG | 1 cut(s) | 1905 |
| BssT1I | CCWWGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| Bst2BI | CACGAG | 1 cut(s) | 1905 |
| Bst2UI | CCWGG | 1 cut(s) | 1622 |
| Bst4CI | ACNGT | 1 cut(s) | 409 |
| Bst6I | CTCTTC | 4 cut(s) | 52, 338, 576, 1199 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1448 |
| BstAUI | TGTACA | 1 cut(s) | 1765 |
| BstBAI | YACGTR | 1 cut(s) | 1783 |
| BstBI | TTCGAA | 2 cut(s) | 579, 1969 |
| BstC8I | GCNNGC | 3 cut(s) | 643, 1371, 1482 |
| BstDEI | CTNAG | 4 cut(s) | 313, 979, 1467, 1739 |
| BstDSI | CCRYGG | 1 cut(s) | 1609 |
| BstF5I | GGATG | 5 cut(s) | 125, 610, 855, 1101, 1707 |
| BstKTI | GATC | 2 cut(s) | 870, 1249 |
| BstMAI | GTCTC | 2 cut(s) | 704, 1808 |
| BstMBI | GATC | 2 cut(s) | 867, 1246 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 446, 455, 647, 782, 1448, 1742, 1916 |
| BstNI | CCWGG | 1 cut(s) | 1622 |
| BstNSI | RCATGY | 1 cut(s) | 481 |
| BstSCI | CCNGG | 1 cut(s) | 1620 |
| BstSFI | CTRYAG | 2 cut(s) | 188, 920 |
| BstSLI | GKGCMC | 1 cut(s) | 1777 |
| BstV1I | GCAGC | 6 cut(s) | 276, 436, 625, 662, 983, 1732 |
| BsuRI | GGCC | 4 cut(s) | 695, 736, 958, 1536 |
| BtgI | CCRYGG | 1 cut(s) | 1609 |
| BtrI | CACGTC | 1 cut(s) | 178 |
| BtsCI | GGATG | 5 cut(s) | 125, 610, 855, 1101, 1707 |
| BtsI | GCAGTG | 1 cut(s) | 1802 |
| BtsIMutI | CAGTG | 2 cut(s) | 1802, 1832 |
| Cac8I | GCNNGC | 3 cut(s) | 643, 1371, 1482 |
| Cfr10I | RCCGGY | 1 cut(s) | 954 |
| Cfr13I | GGNCC | 2 cut(s) | 693, 997 |
| Csp6I | GTAC | 5 cut(s) | 1017, 1363, 1606, 1766, 1784 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1526, 1561 |
| CviAII | CATG | 8 cut(s) | 478, 1022, 1043, 1196, 1255, 1378, 1610, 1929 |
| CviQI | GTAC | 5 cut(s) | 1017, 1363, 1606, 1766, 1784 |
| DdeI | CTNAG | 4 cut(s) | 313, 979, 1467, 1739 |
| DpnI | GATC | 2 cut(s) | 869, 1248 |
| DpnII | GATC | 2 cut(s) | 867, 1246 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1135 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1135 |
| EaeI | YGGCCR | 1 cut(s) | 956 |
| Eam1104I | CTCTTC | 4 cut(s) | 52, 338, 576, 1199 |
| EarI | CTCTTC | 4 cut(s) | 52, 338, 576, 1199 |
| Eco130I | CCWWGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| Eco147I | AGGCCT | 1 cut(s) | 736 |
| Eco24I | GRGCYC | 1 cut(s) | 1738 |
| Eco31I | GGTCTC | 1 cut(s) | 1808 |
| Eco47I | GGWCC | 1 cut(s) | 997 |
| Eco57I | CTGAAG | 3 cut(s) | 75, 362, 1808 |
| EcoO109I | RGGNCCY | 1 cut(s) | 997 |
| EcoRI | GAATTC | 1 cut(s) | 1030 |
| EcoRII | CCWGG | 1 cut(s) | 1620 |
| EcoT14I | CCWWGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| EcoT22I | ATGCAT | 3 cut(s) | 479, 778, 1267 |
| EcoT38I | GRGCYC | 1 cut(s) | 1738 |
| ErhI | CCWWGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| FaeI | CATG | 8 cut(s) | 481, 1025, 1046, 1199, 1258, 1381, 1613, 1932 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1277, 1309, 1928, 1960 |
| FaqI | GGGAC | 4 cut(s) | 44, 238, 271, 341 |
| FatI | CATG | 8 cut(s) | 477, 1021, 1042, 1195, 1254, 1377, 1609, 1928 |
| FbaI | TGATCA | 2 cut(s) | 867, 1246 |
| Fnu4HI | GCNGC | 6 cut(s) | 265, 450, 639, 651, 972, 1746 |
| FokI | GGATG | 5 cut(s) | 112, 617, 862, 1108, 1714 |
| FriOI | GRGCYC | 1 cut(s) | 1738 |
| Fsp4HI | GCNGC | 6 cut(s) | 265, 450, 639, 651, 972, 1746 |
| FspBI | CTAG | 2 cut(s) | 1067, 1728 |
| GluI | GCNGC | 6 cut(s) | 265, 450, 639, 651, 972, 1746 |
| GsaI | CCCAGC | 1 cut(s) | 1062 |
| HaeIII | GGCC | 4 cut(s) | 695, 736, 958, 1536 |
| HapII | CCGG | 2 cut(s) | 629, 955 |
| Hin1II | CATG | 8 cut(s) | 481, 1025, 1046, 1199, 1258, 1381, 1613, 1932 |
| HindIII | AAGCTT | 4 cut(s) | 12, 1394, 1670, 1820 |
| HinfI | GANTC | 3 cut(s) | 469, 680, 743 |
| HpaII | CCGG | 2 cut(s) | 629, 955 |
| HphI | GGTGA | 5 cut(s) | 141, 172, 697, 944, 1213 |
| Hpy166II | GTNNAC | 1 cut(s) | 1775 |
| Hpy188III | TCNNGA | 6 cut(s) | 484, 1321, 1331, 1429, 1456, 1728 |
| Hpy8I | GTNNAC | 1 cut(s) | 1775 |
| Hpy99I | CGWCG | 1 cut(s) | 1322 |
| HpyAV | CCTTC | 8 cut(s) | 96, 775, 929, 1086, 1225, 1511, 1536, 1791 |
| HpyCH4III | ACNGT | 1 cut(s) | 409 |
| HpyCH4IV | ACGT | 2 cut(s) | 177, 1782 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 446, 455, 647, 782, 1448, 1742, 1916 |
| HpyF3I | CTNAG | 4 cut(s) | 313, 979, 1467, 1739 |
| HpySE526I | ACGT | 2 cut(s) | 177, 1782 |
| Hsp92II | CATG | 8 cut(s) | 481, 1025, 1046, 1199, 1258, 1381, 1613, 1932 |
| KpnI | GGTACC | 1 cut(s) | 1020 |
| Ksp22I | TGATCA | 2 cut(s) | 867, 1246 |
| Kzo9I | GATC | 2 cut(s) | 867, 1246 |
| LmnI | GCTCC | 1 cut(s) | 1471 |
| Lsp1109I | GCAGC | 6 cut(s) | 276, 436, 625, 662, 983, 1732 |
| LweI | GCATC | 5 cut(s) | 1063, 1176, 1252, 1291, 1624 |
| MaeI | CTAG | 2 cut(s) | 1067, 1728 |
| MaeII | ACGT | 2 cut(s) | 177, 1782 |
| MaeIII | GTNAC | 3 cut(s) | 178, 551, 1840 |
| MalI | GATC | 2 cut(s) | 869, 1248 |
| MboI | GATC | 2 cut(s) | 867, 1246 |
| MfeI | CAATTG | 1 cut(s) | 1638 |
| MhlI | GDGCHC | 2 cut(s) | 1738, 1777 |
| MmeI | TCCRAC | 2 cut(s) | 106, 789 |
| Mph1103I | ATGCAT | 3 cut(s) | 479, 778, 1267 |
| MroXI | GAANNNNTTC | 2 cut(s) | 245, 1213 |
| MseI | TTAA | 9 cut(s) | 102, 882, 929, 941, 1142, 1239, 1284, 1398, 1595 |
| MspI | CCGG | 2 cut(s) | 629, 955 |
| MspR9I | CCNGG | 1 cut(s) | 1622 |
| MunI | CAATTG | 1 cut(s) | 1638 |
| Mva1269I | GAATGC | 2 cut(s) | 1265, 1373 |
| MvaI | CCWGG | 1 cut(s) | 1622 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 446, 455, 647, 782, 1448, 1742, 1916 |
| NcoI | CCATGG | 1 cut(s) | 1609 |
| NdeII | GATC | 2 cut(s) | 867, 1246 |
| NlaIII | CATG | 8 cut(s) | 481, 1025, 1046, 1199, 1258, 1381, 1613, 1932 |
| NlaIV | GGNNCC | 3 cut(s) | 694, 999, 1018 |
| NmeAIII | GCCGAG | 1 cut(s) | 721 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| NsiI | ATGCAT | 3 cut(s) | 479, 778, 1267 |
| NspI | RCATGY | 1 cut(s) | 481 |
| NspV | TTCGAA | 2 cut(s) | 579, 1969 |
| PceI | AGGCCT | 1 cut(s) | 736 |
| PctI | GAATGC | 2 cut(s) | 1265, 1373 |
| PdmI | GAANNNNTTC | 2 cut(s) | 245, 1213 |
| PfeI | GAWTC | 3 cut(s) | 469, 680, 743 |
| PflFI | GACNNNGTC | 1 cut(s) | 176 |
| PfoI | TCCNGGA | 1 cut(s) | 1620 |
| PkrI | GCNGC | 6 cut(s) | 266, 451, 640, 652, 973, 1747 |
| Ppu21I | YACGTR | 1 cut(s) | 1783 |
| PpuMI | RGGWCCY | 1 cut(s) | 997 |
| PshBI | ATTAAT | 1 cut(s) | 1142 |
| Psp5II | RGGWCCY | 1 cut(s) | 997 |
| Psp6I | CCWGG | 1 cut(s) | 1620 |
| PspFI | CCCAGC | 1 cut(s) | 1058 |
| PspGI | CCWGG | 1 cut(s) | 1620 |
| PspN4I | GGNNCC | 3 cut(s) | 694, 999, 1018 |
| PspPI | GGNCC | 2 cut(s) | 693, 997 |
| PspPPI | RGGWCCY | 1 cut(s) | 997 |
| PstI | CTGCAG | 1 cut(s) | 924 |
| PsyI | GACNNNGTC | 1 cut(s) | 176 |
| RsaI | GTAC | 5 cut(s) | 1018, 1364, 1607, 1767, 1785 |
| RsaNI | GTAC | 5 cut(s) | 1017, 1363, 1606, 1766, 1784 |
| SaqAI | TTAA | 9 cut(s) | 102, 882, 929, 941, 1142, 1239, 1284, 1398, 1595 |
| SatI | GCNGC | 6 cut(s) | 265, 450, 639, 651, 972, 1746 |
| Sau3AI | GATC | 2 cut(s) | 867, 1246 |
| Sau96I | GGNCC | 2 cut(s) | 693, 997 |
| ScrFI | CCNGG | 1 cut(s) | 1622 |
| SduI | GDGCHC | 2 cut(s) | 1738, 1777 |
| SfaNI | GCATC | 5 cut(s) | 1063, 1176, 1252, 1291, 1624 |
| SfcI | CTRYAG | 2 cut(s) | 188, 920 |
| SfuI | TTCGAA | 2 cut(s) | 579, 1969 |
| SinI | GGWCC | 1 cut(s) | 997 |
| SmlI | CTYRAG | 2 cut(s) | 1329, 1979 |
| SmoI | CTYRAG | 2 cut(s) | 1329, 1979 |
| SseBI | AGGCCT | 1 cut(s) | 736 |
| SsiI | CCGC | 1 cut(s) | 719 |
| SspMI | CTAG | 2 cut(s) | 1067, 1728 |
| StuI | AGGCCT | 1 cut(s) | 736 |
| StyD4I | CCNGG | 1 cut(s) | 1620 |
| StyI | CCWWGG | 4 cut(s) | 1537, 1609, 1790, 1999 |
| TaaI | ACNGT | 1 cut(s) | 409 |
| TaiI | ACGT | 2 cut(s) | 180, 1785 |
| TaqI | TCGA | 4 cut(s) | 579, 1003, 1320, 1969 |
| TatI | WGTACW | 1 cut(s) | 1765 |
| TfiI | GAWTC | 3 cut(s) | 469, 680, 743 |
| Tru1I | TTAA | 9 cut(s) | 102, 882, 929, 941, 1142, 1239, 1284, 1398, 1595 |
| Tru9I | TTAA | 9 cut(s) | 102, 882, 929, 941, 1142, 1239, 1284, 1398, 1595 |
| TscAI | CASTG | 2 cut(s) | 1809, 1832 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| TseI | GCWGC | 6 cut(s) | 264, 449, 638, 650, 971, 1745 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspDTI | ATGAA | 9 cut(s) | 309, 323, 446, 638, 756, 1031, 1352, 1366, 1862 |
| TspRI | CASTG | 2 cut(s) | 1809, 1832 |
| Tth111I | GACNNNGTC | 1 cut(s) | 176 |
| VneI | GTGCAC | 1 cut(s) | 1773 |
| VpaK11BI | GGWCC | 1 cut(s) | 997 |
| VspI | ATTAAT | 1 cut(s) | 1142 |
| XapI | RAATTY | 5 cut(s) | 899, 1030, 1241, 1524, 1558 |
| XbaI | TCTAGA | 1 cut(s) | 1727 |
| XceI | RCATGY | 1 cut(s) | 481 |
| XmnI | GAANNNNTTC | 2 cut(s) | 245, 1213 |
| XspI | CTAG | 2 cut(s) | 1067, 1728 |
| Zsp2I | ATGCAT | 3 cut(s) | 479, 778, 1267 |