Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001893

Physical Location & Seq

Genomic Coordinates Reverse (-)

48474650 .. 48479963

Gene Structure 5314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0309200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGTCTTGATGGAAGGGAGGCCTAAGATCACTGAGCTTCGGCCACTTCTACTGCTACTGATCGCAGCTTGCTTCGCCATTGAGATCCACGCTTCTTCTCAAAACCACGACGTCAATGCGATCTTTTACGAGCCGTTCGATGAGTCATTCGAAGGTCGCTGGATTGTTTCCGCCAAAGATGAGTACAAAGGTGTGTGGAAACTATCAAAGAGTGAGGGGCATGATGATTATGGGCTTTTGGTGAGTGAGAAAGCGAGGAAGTATGCGCTAGTGAAAGAGCTAGATGAGGCTGTGAGCCTTAATGGTAGAACTATTGTGTTGCAGTTCGAGGTTCGGCTACAGAATAGCCTTGAATGTGGTGGTGCTTACTTGAAGTACCTCCGGCCACAGGAGGCTGGGTGGAAACCTGAAGGGTTTGATAATGATTCCCCGTATTCAATTATGTTTGGACCTGATAAATGTGGCACGACGAATAGGGTTCATTTTATTTTTAAGCACAAGAACCCCAAGAGTGGTGAGTACGTTGAGCACCATCTCAAGAACACTCCAACTGTGCCTGATGACAGACTCTCCCATGTCTACACGGCAATAGTGAAAGCCGATAAAGAAGTTAGAATTTTGGTAGATGGAGAGGAGAAGAAGAAGGCAAGGTTCCTTTCTGCTCAAGATTTTGAACCTGCATTGATTCCAGCCAAGACTATTCCTGACCCAAATGATAAGAAGCCAGCGGATTGGGACGAGCGGCCAAAGATTCCAGATCCAGATGCTGTGAAGCCTGATGATTGGGATGAAAATGCTCCAATGGAAATTGAAGATGAGGAAGCTGAGAAACCTGAAGGATGGTTGGATGATGAGCCTAACGAGATTGATGACCCTGAAGCGACAAAGCCAGAGGATTGGGATGATGAAGAGGATGGTGAATGGGAACCACCAAAGCTGGAAAACCCCAAGTGCTTCTTGGCACCAGGTTGTGGAAAATGGAAGAGGCCGATGAAGAGAAATCCTGCTTATAAAGGAAAATGGCACCGTCCTCTGATTGAGAATCCCAGTTACAAGGGTATCTGGAAACCTCAACAAATCCCAAACCCTCATTACTTTGAGACTGATAAGCCTGACTTTGAGGCCATAGCTGCCATTGGCATTGAGATCTGGACAATGCAGGACGGCATATTGTTTGACAACATTCTAATAGCTGATAATGAGAAGGTTGCCGAATCTTATAGGAGAACAACATGGAAGCCAAAATTTAATGTTGAGAAAGAGAAGCAAAGGGCTGAGGAGGCAGCTGCAGGTCTTTCATTTGGACTCTCAAGCATCCAGAAAAAAATATTTGACGTTCTCTACAAGATAGCAGGTGTTTCGTTCTTGGATGCATACAAACCCAAGATCATTGATCTAATTGAGAAAGCAGAAAAACAGCCCAATATTACAGTTGGTGTCATTGTATCCATCGTGGTCATTCTTTTGACAGTTCTCTTCAAAATTCTTTTTGGTGGCAAAGCACCTGCGGTTGCTCCTCATGAACCTTACAGGGGAGCGGCTGCAGGGATTTCCACCAAGGAAGGAAGCGGAAACAGTGGGGTGAAGGCAGATGAGACTGAGAAGGAAGATGCCACTCCCCGCAGGAGATCTACCAGAAGGGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

549

Amino Acids

62.24

Weight (kDa)

5.23

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Calreticulin	PF00262	42 - 397	1.6e-141	Calreticulin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68980 AT1G69290
fragaria_vesca	FvH4_4g15871 FvH4_4g30080 FvH4_5g31861
malus_domestica	MD13G1062900.v1.1 MD16G1061200.v1.1
prunus_persica	Prupe.1G286800_v2.0.a1
pyrus_communis	pycom13g05530 pycom16g05360
rosa_chinensis	RchiOBHm_Chr4g0438351 RchiOBHm_Chr5g0081041 RchiOBHm_Chr5g0081051
rosa_laevigata	RLG00000006368 RLG00000009184 RLG00000022150 RLG00000029496 RLG00000029523
rosa_multiflora	Rmu_co8205326.1_g000001 Rmu_co8209074.1_g000001 Rmu_co8210450.1_g000001 Rmu_sc0000029.1_g000033 Rmu_sc0000331.1_g000016 Rmu_sc0000718.1_g000024 Rmu_sc0002327.1_g000027 Rmu_sc0002541.1_g000004 Rmu_sc0006274.1_g000003 Rmu_sc0006274.1_g000004 Rmu_sc0007103.1_g000005 Rmu_sc0011176.1_g000001 Rmu_sc0012743.1_g000002 Rmu_sc0022931.1_g000002 Rmu_sc0025676.1_g000001 Rmu_sc0026128.1_g000001 Rmu_ssc0000432.1_g000117
rosa_roxburghii	Rroxscaffold_1G00002450 Rroxscaffold_2G00085350 Rroxscaffold_3G00249820
rosa_rugosa	Rorug04G0309200 Rorug06G0034900
rosa_samantha	Rh4AG360300 Rh4BG371200 Rh4CG385200 Rh4DG366100
rosa_wichuraiana	Rw0G006490 Rw0G016440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1011
AarI	CACCTGC	2 cut(s)	1343, 1513
AatII	GACGTC	1 cut(s)	114
Acc36I	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
AccB1I	GGYRCC	2 cut(s)	961, 1023
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccBSI	CCGCTC	2 cut(s)	742, 1538
AccI	GTMKAC	1 cut(s)	579
AciI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
AclWI	GGATC	2 cut(s)	79, 752
AcoI	YGGCCR	3 cut(s)	41, 383, 743
AcsI	RAATTY	3 cut(s)	615, 1244, 1482
AcuI	CTGAAG	3 cut(s)	429, 855, 897
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	3 cut(s)	185, 377, 521
AfiI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
AgsI	TTSAA	6 cut(s)	353, 373, 438, 674, 812, 1480
AjnI	CCWGG	1 cut(s)	964
AluBI	AGCT	8 cut(s)	37, 68, 280, 824, 937, 1130, 1193, 1286
AluI	AGCT	8 cut(s)	37, 68, 280, 824, 937, 1130, 1193, 1286
Alw21I	GWGCWC	1 cut(s)	531
Alw26I	GTCTC	2 cut(s)	1094, 1589
AlwI	GGATC	2 cut(s)	79, 752
AlwNI	CAGNNNCTG	1 cut(s)	767
AoxI	GGCC	6 cut(s)	20, 41, 383, 743, 986, 1122
ApeKI	GCWGC	5 cut(s)	65, 1130, 1283, 1286, 1541
ApoI	RAATTY	3 cut(s)	615, 1244, 1482
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	1 cut(s)	449
AsuHPI	GGTGA	4 cut(s)	253, 527, 929, 1594
AsuII	TTCGAA	1 cut(s)	150
AvaII	GGWCC	1 cut(s)	449
BaeI	ACNNNNGTAYC	2 cut(s)	1042, 1075
BanI	GGYRCC	2 cut(s)	961, 1023
Bbv12I	GWGCWC	1 cut(s)	531
BbvCI	CCTCAGC	1 cut(s)	1275
BbvI	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BccI	CCATC	6 cut(s)	4, 540, 620, 834, 908, 1457
BceAI	ACGGC	3 cut(s)	118, 600, 1180
BcgI	CGANNNNNNTGC	4 cut(s)	98, 132, 1341, 1375
BciT130I	CCWGG	1 cut(s)	966
BciVI	GTATCC	1 cut(s)	1456
BcoDI	GTCTC	2 cut(s)	1094, 1589
BfaI	CTAG	2 cut(s)	269, 281
BfmI	CTRYAG	3 cut(s)	338, 1287, 1542
BfuAI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
BfuI	GTATCC	1 cut(s)	1456
BglII	AGATCT	2 cut(s)	1146, 1628
BisI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
BlsI	GCNGC	7 cut(s)	67, 744, 1132, 1285, 1288, 1540, 1543
Bme1390I	CCNGG	1 cut(s)	966
Bme18I	GGWCC	1 cut(s)	449
BmgT120I	GGNCC	1 cut(s)	449
BmiI	GGNNCC	4 cut(s)	653, 927, 963, 1025
BmrFI	CCNGG	1 cut(s)	966
BmrI	ACTGGG	1 cut(s)	1041
BmsI	GCATC	4 cut(s)	754, 1323, 1360, 1600
BmuI	ACTGGG	1 cut(s)	1041
Bpu10I	CCTNAGC	1 cut(s)	1275
Bpu14I	TTCGAA	1 cut(s)	150
BpuEI	CTTGAG	3 cut(s)	521, 648, 1294
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	1 cut(s)	1557
BsaXI	ACNNNNNCTCC	4 cut(s)	383, 413, 554, 584
Bsc4I	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
Bse1I	ACTGG	1 cut(s)	1047
BseBI	CCWGG	1 cut(s)	966
BseDI	CCNNGG	1 cut(s)	1557
BseGI	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BseLI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
BseMII	CTCAG	4 cut(s)	24, 816, 1266, 1590
BseNI	ACTGG	1 cut(s)	1047
BseRI	GAGGAG	3 cut(s)	647, 1292, 1506
BseXI	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BseYI	CCCAGC	1 cut(s)	395
BshFI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BshNI	GGYRCC	2 cut(s)	961, 1023
BsiHKAI	GWGCWC	1 cut(s)	531
BsiSI	CCGG	1 cut(s)	382
BslFI	GGGAC	1 cut(s)	749
BslI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
BsmAI	GTCTC	2 cut(s)	1094, 1589
BsmFI	GGGAC	1 cut(s)	749
BsnI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
Bsp119I	TTCGAA	1 cut(s)	150
Bsp1286I	GDGCHC	1 cut(s)	531
Bsp143I	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BspACI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
BspANI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BspCNI	CTCAG	4 cut(s)	25, 817, 1267, 1591
BspHI	TCATGA	1 cut(s)	1519
BspLI	GGNNCC	4 cut(s)	653, 927, 963, 1025
BspMAI	CTGCAG	2 cut(s)	1291, 1546
BspMI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
BspPI	GGATC	2 cut(s)	79, 752
BspT104I	TTCGAA	1 cut(s)	150
BspT107I	GGYRCC	2 cut(s)	961, 1023
BsrBI	CCGCTC	2 cut(s)	742, 1538
BsrI	ACTGG	1 cut(s)	1047
BssECI	CCNNGG	1 cut(s)	1557
BssMI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BssNI	GRCGYC	1 cut(s)	111
BssT1I	CCWWGG	1 cut(s)	1557
Bst2UI	CCWGG	1 cut(s)	966
Bst4CI	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
Bst6I	CTCTTC	4 cut(s)	903, 977, 989, 1481
BstACI	GRCGYC	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	150
BstC8I	GCNNGC	2 cut(s)	70, 726
BstDEI	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
BstF5I	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	9 cut(s)	30, 63, 87, 123, 760, 1149, 1389, 1396, 1631
BstMAI	GTCTC	2 cut(s)	1094, 1589
BstMBI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BstMWI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
BstNI	CCWGG	1 cut(s)	966
BstSCI	CCNGG	1 cut(s)	964
BstSFI	CTRYAG	3 cut(s)	338, 1287, 1542
BstV1I	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BstX2I	RGATCY	4 cut(s)	84, 757, 1146, 1628
BstXI	CCANNNNNNTGG	2 cut(s)	732, 897
BstYI	RGATCY	4 cut(s)	84, 757, 1146, 1628
BsuI	GTATCC	1 cut(s)	1456
BsuRI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BtsCI	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BtsIMutI	CAGTG	2 cut(s)	30, 1582
BveI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
Cac8I	GCNNGC	2 cut(s)	70, 726
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	1 cut(s)	1519
CfoI	GCGC	1 cut(s)	268
Cfr13I	GGNCC	1 cut(s)	449
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	3 cut(s)	184, 376, 520
CviAII	CATG	4 cut(s)	221, 575, 1233, 1520
CviQI	GTAC	3 cut(s)	184, 376, 520
DdeI	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
DpnI	GATC	9 cut(s)	29, 62, 86, 122, 759, 1148, 1388, 1395, 1630
DpnII	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
EaeI	YGGCCR	3 cut(s)	41, 383, 743
Eam1104I	CTCTTC	4 cut(s)	903, 977, 989, 1481
EarI	CTCTTC	4 cut(s)	903, 977, 989, 1481
EciI	GGCGGA	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1557
Eco147I	AGGCCT	1 cut(s)	22
Eco47I	GGWCC	1 cut(s)	449
Eco57I	CTGAAG	3 cut(s)	429, 855, 897
EcoRII	CCWGG	1 cut(s)	964
EcoT14I	CCWWGG	1 cut(s)	1557
EcoT22I	ATGCAT	1 cut(s)	1375
ErhI	CCWWGG	1 cut(s)	1557
FaeI	CATG	4 cut(s)	224, 578, 1236, 1523
FalI	AAGNNNNNCTT	5 cut(s)	941, 973, 1100, 1132, 1630
FaqI	GGGAC	1 cut(s)	749
FatI	CATG	4 cut(s)	220, 574, 1232, 1519
FauI	CCCGC	1 cut(s)	1628
FblI	GTMKAC	1 cut(s)	579
Fnu4HI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
FokI	GGATG	7 cut(s)	800, 852, 860, 914, 926, 1301, 1382
Fsp4HI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
FspBI	CTAG	2 cut(s)	269, 281
GlaI	GCGC	1 cut(s)	267
GluI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
GsaI	CCCAGC	1 cut(s)	399
HaeIII	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
HapII	CCGG	1 cut(s)	382
HhaI	GCGC	1 cut(s)	268
Hin1I	GRCGYC	1 cut(s)	111
Hin1II	CATG	4 cut(s)	224, 578, 1236, 1523
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HinfI	GANTC	8 cut(s)	143, 425, 567, 685, 751, 1042, 1214, 1305
HpaII	CCGG	1 cut(s)	382
HphI	GGTGA	4 cut(s)	253, 527, 929, 1594
Hpy166II	GTNNAC	1 cut(s)	580
Hpy188I	TCNGA	1 cut(s)	1035
Hpy8I	GTNNAC	1 cut(s)	580
Hpy99I	CGWCG	2 cut(s)	113, 472
HpyCH4III	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
HpyCH4IV	ACGT	3 cut(s)	111, 522, 1335
HpyCH4V	TGCA	6 cut(s)	322, 680, 1159, 1289, 1373, 1544
HpyF10VI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
HpyF3I	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
HpySE526I	ACGT	3 cut(s)	111, 522, 1335
Hsp92I	GRCGYC	1 cut(s)	111
Hsp92II	CATG	4 cut(s)	224, 578, 1236, 1523
HspAI	GCGC	1 cut(s)	266
Kzo9I	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
LmnI	GCTCC	3 cut(s)	802, 1519, 1535
Lsp1109I	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
LweI	GCATC	4 cut(s)	754, 1323, 1360, 1600
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	2 cut(s)	269, 281
MaeII	ACGT	3 cut(s)	111, 522, 1335
MaeIII	GTNAC	1 cut(s)	1049
MalI	GATC	9 cut(s)	29, 62, 86, 122, 759, 1148, 1388, 1395, 1630
MbiI	CCGCTC	2 cut(s)	742, 1538
MboI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
MboII	GAAGA	9 cut(s)	87, 649, 652, 824, 920, 994, 1006, 1468, 1619
MflI	RGATCY	4 cut(s)	84, 757, 1146, 1628
MhlI	GDGCHC	1 cut(s)	531
MluCI	AATT	6 cut(s)	438, 615, 807, 1244, 1398, 1482
MlyI	GAGTC	3 cut(s)	152, 561, 1299
MmeI	TCCRAC	2 cut(s)	572, 825
Mph1103I	ATGCAT	1 cut(s)	1375
MseI	TTAA	3 cut(s)	300, 492, 1248
MspA1I	CMGCKG	2 cut(s)	728, 1286
MspI	CCGG	1 cut(s)	382
MspR9I	CCNGG	1 cut(s)	966
MvaI	CCWGG	1 cut(s)	966
MwoI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
NdeII	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
NlaIII	CATG	4 cut(s)	224, 578, 1236, 1523
NlaIV	GGNNCC	4 cut(s)	653, 927, 963, 1025
NsiI	ATGCAT	1 cut(s)	1375
NspV	TTCGAA	1 cut(s)	150
PagI	TCATGA	1 cut(s)	1519
PaqCI	CACCTGC	2 cut(s)	1343, 1513
PceI	AGGCCT	1 cut(s)	22
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PfeI	GAWTC	5 cut(s)	425, 685, 751, 1042, 1214
PflMI	CCANNNNNTGG	1 cut(s)	971
PkrI	GCNGC	7 cut(s)	67, 744, 1132, 1285, 1288, 1540, 1543
PleI	GAGTC	3 cut(s)	151, 561, 1299
PpsI	GAGTC	3 cut(s)	151, 561, 1299
PsiI	TTATAA	1 cut(s)	1011
Psp6I	CCWGG	1 cut(s)	964
PspFI	CCCAGC	1 cut(s)	395
PspGI	CCWGG	1 cut(s)	964
PspN4I	GGNNCC	4 cut(s)	653, 927, 963, 1025
PspPI	GGNCC	1 cut(s)	449
PstI	CTGCAG	2 cut(s)	1291, 1546
PstNI	CAGNNNCTG	1 cut(s)	767
PsuI	RGATCY	4 cut(s)	84, 757, 1146, 1628
PvuII	CAGCTG	1 cut(s)	1286
RsaI	GTAC	3 cut(s)	185, 377, 521
RsaNI	GTAC	3 cut(s)	184, 376, 520
SaqAI	TTAA	3 cut(s)	300, 492, 1248
SatI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
Sau3AI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
Sau96I	GGNCC	1 cut(s)	449
SchI	GAGTC	3 cut(s)	152, 561, 1299
ScrFI	CCNGG	1 cut(s)	966
SduI	GDGCHC	1 cut(s)	531
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	4 cut(s)	754, 1323, 1360, 1600
SfcI	CTRYAG	3 cut(s)	338, 1287, 1542
SfuI	TTCGAA	1 cut(s)	150
SinI	GGWCC	1 cut(s)	449
SmlI	CTYRAG	3 cut(s)	536, 663, 1309
SmoI	CTYRAG	3 cut(s)	536, 663, 1309
Sse9I	AATT	6 cut(s)	438, 615, 807, 1244, 1398, 1482
SseBI	AGGCCT	1 cut(s)	22
SsiI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
SspI	AATATT	2 cut(s)	1329, 1426
SspMI	CTAG	2 cut(s)	269, 281
StuI	AGGCCT	1 cut(s)	22
StyD4I	CCNGG	1 cut(s)	964
StyI	CCWWGG	1 cut(s)	1557
TaaI	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
TaiI	ACGT	3 cut(s)	114, 525, 1338
TaqI	TCGA	3 cut(s)	138, 150, 327
TasI	AATT	6 cut(s)	438, 615, 807, 1244, 1398, 1482
TatI	WGTACW	1 cut(s)	183
TauI	GCSGC	2 cut(s)	745, 1541
TfiI	GAWTC	5 cut(s)	425, 685, 751, 1042, 1214
Tru1I	TTAA	3 cut(s)	300, 492, 1248
Tru9I	TTAA	3 cut(s)	300, 492, 1248
TscAI	CASTG	2 cut(s)	37, 1582
TseI	GCWGC	5 cut(s)	65, 1130, 1283, 1286, 1541
TspDTI	ATGAA	6 cut(s)	470, 804, 921, 1007, 1287, 1536
TspRI	CASTG	2 cut(s)	37, 1582
Van91I	CCANNNNNTGG	1 cut(s)	971
VpaK11BI	GGWCC	1 cut(s)	449
XapI	RAATTY	3 cut(s)	615, 1244, 1482
XcmI	CCANNNNNNNNNTGG	1 cut(s)	955
XmiI	GTMKAC	1 cut(s)	579
XspI	CTAG	2 cut(s)	269, 281
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.