E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1254, 1571 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1156 |
| AccI | GTMKAC | 1 cut(s) | 1112 |
| AccII | CGCG | 1 cut(s) | 1210 |
| AclWI | GGATC | 1 cut(s) | 1590 |
| AcsI | RAATTY | 4 cut(s) | 123, 532, 1316, 1679 |
| AcuI | CTGAAG | 1 cut(s) | 269 |
| AdeI | CACNNNGTG | 1 cut(s) | 434 |
| AfaI | GTAC | 2 cut(s) | 992, 1589 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1156 |
| AflII | CTTAAG | 1 cut(s) | 934 |
| AflIII | ACRYGT | 3 cut(s) | 78, 456, 1412 |
| AhlI | ACTAGT | 1 cut(s) | 299 |
| AjnI | CCWGG | 1 cut(s) | 1305 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1688, 1720 |
| Alw21I | GWGCWC | 2 cut(s) | 410, 751 |
| Alw26I | GTCTC | 4 cut(s) | 159, 488, 832, 1677 |
| Alw44I | GTGCAC | 1 cut(s) | 747 |
| AlwI | GGATC | 1 cut(s) | 1590 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 782, 1156 |
| AoxI | GGCC | 2 cut(s) | 822, 1288 |
| ApaLI | GTGCAC | 1 cut(s) | 747 |
| ApeKI | GCWGC | 2 cut(s) | 547, 550 |
| ApoI | RAATTY | 4 cut(s) | 123, 532, 1316, 1679 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1295, 1327 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 784 |
| AspLEI | GCGC | 2 cut(s) | 1210, 1212 |
| AsuHPI | GGTGA | 3 cut(s) | 953, 1258, 1568 |
| AsuII | TTCGAA | 1 cut(s) | 1453 |
| BaeGI | GKGCMC | 1 cut(s) | 751 |
| BanII | GRGCYC | 1 cut(s) | 410 |
| Bbv12I | GWGCWC | 2 cut(s) | 410, 751 |
| BbvI | GCAGC | 2 cut(s) | 534, 537 |
| BccI | CCATC | 1 cut(s) | 214 |
| BciT130I | CCWGG | 1 cut(s) | 1307 |
| BclI | TGATCA | 2 cut(s) | 504, 1606 |
| BcoDI | GTCTC | 4 cut(s) | 159, 488, 832, 1677 |
| BcuI | ACTAGT | 1 cut(s) | 299 |
| BfaI | CTAG | 3 cut(s) | 300, 1142, 1278 |
| BfmI | CTRYAG | 1 cut(s) | 833 |
| BfrI | CTTAAG | 1 cut(s) | 934 |
| BisI | GCNGC | 2 cut(s) | 548, 551 |
| BlsI | GCNGC | 2 cut(s) | 549, 552 |
| Bme1390I | CCNGG | 1 cut(s) | 1307 |
| BmiI | GGNNCC | 1 cut(s) | 787 |
| BmrFI | CCNGG | 1 cut(s) | 1307 |
| BmsI | GCATC | 3 cut(s) | 510, 1550, 1645 |
| Bpu14I | TTCGAA | 1 cut(s) | 1453 |
| BpuEI | CTTGAG | 2 cut(s) | 773, 1709 |
| BsaAI | YACGTR | 1 cut(s) | 1130 |
| BsaJI | CCNNGG | 1 cut(s) | 1240 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1156 |
| Bse1I | ACTGG | 3 cut(s) | 787, 789, 1519 |
| Bse3DI | GCAATG | 4 cut(s) | 262, 920, 1234, 1674 |
| BseBI | CCWGG | 1 cut(s) | 1307 |
| BseDI | CCNNGG | 1 cut(s) | 1240 |
| BseGI | GGATG | 1 cut(s) | 525 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1156 |
| BseMI | GCAATG | 4 cut(s) | 262, 920, 1234, 1674 |
| BseMII | CTCAG | 2 cut(s) | 499, 1613 |
| BseNI | ACTGG | 3 cut(s) | 787, 789, 1519 |
| BsePI | GCGCGC | 1 cut(s) | 1208 |
| BseRI | GAGGAG | 3 cut(s) | 154, 668, 1706 |
| BseSI | GKGCMC | 1 cut(s) | 751 |
| BseXI | GCAGC | 2 cut(s) | 534, 537 |
| BsgI | GTGCAG | 1 cut(s) | 1404 |
| Bsh1236I | CGCG | 1 cut(s) | 1210 |
| BshFI | GGCC | 2 cut(s) | 824, 1290 |
| BsiHKAI | GWGCWC | 2 cut(s) | 410, 751 |
| BsiSI | CCGG | 1 cut(s) | 471 |
| BslFI | GGGAC | 3 cut(s) | 308, 554, 1414 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1156 |
| BsmAI | GTCTC | 4 cut(s) | 159, 488, 832, 1677 |
| BsmFI | GGGAC | 3 cut(s) | 308, 554, 1414 |
| BsmI | GAATGC | 2 cut(s) | 21, 454 |
| BsnI | GGCC | 2 cut(s) | 824, 1290 |
| Bsp119I | TTCGAA | 1 cut(s) | 1453 |
| Bsp1286I | GDGCHC | 2 cut(s) | 410, 751 |
| Bsp1407I | TGTACA | 1 cut(s) | 1587 |
| Bsp143I | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| BspANI | GGCC | 2 cut(s) | 824, 1290 |
| BspCNI | CTCAG | 2 cut(s) | 498, 1614 |
| BspFNI | CGCG | 1 cut(s) | 1210 |
| BspLI | GGNNCC | 1 cut(s) | 787 |
| BspMAI | CTGCAG | 1 cut(s) | 837 |
| BspPI | GGATC | 1 cut(s) | 1590 |
| BspT104I | TTCGAA | 1 cut(s) | 1453 |
| BspTI | CTTAAG | 1 cut(s) | 934 |
| BsrDI | GCAATG | 4 cut(s) | 262, 920, 1234, 1674 |
| BsrGI | TGTACA | 1 cut(s) | 1587 |
| BsrI | ACTGG | 3 cut(s) | 787, 789, 1519 |
| BssECI | CCNNGG | 1 cut(s) | 1240 |
| BssHII | GCGCGC | 1 cut(s) | 1208 |
| BssMI | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| BssNAI | GTATAC | 1 cut(s) | 1113 |
| BssT1I | CCWWGG | 1 cut(s) | 1240 |
| Bst1107I | GTATAC | 1 cut(s) | 1113 |
| Bst2UI | CCWGG | 1 cut(s) | 1307 |
| Bst4CI | ACNGT | 1 cut(s) | 434 |
| Bst6I | CTCTTC | 3 cut(s) | 129, 832, 1034 |
| BstAFI | CTTAAG | 1 cut(s) | 934 |
| BstAUI | TGTACA | 1 cut(s) | 1587 |
| BstBAI | YACGTR | 1 cut(s) | 1130 |
| BstBI | TTCGAA | 1 cut(s) | 1453 |
| BstC8I | GCNNGC | 3 cut(s) | 639, 1210, 1614 |
| BstDEI | CTNAG | 2 cut(s) | 485, 1622 |
| BstF5I | GGATG | 1 cut(s) | 525 |
| BstFNI | CGCG | 1 cut(s) | 1210 |
| BstHHI | GCGC | 2 cut(s) | 1210, 1212 |
| BstKTI | GATC | 4 cut(s) | 507, 1449, 1585, 1609 |
| BstMAI | GTCTC | 4 cut(s) | 159, 488, 832, 1677 |
| BstMBI | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 364, 1538, 1655, 1664 |
| BstNI | CCWGG | 1 cut(s) | 1307 |
| BstNSI | RCATGY | 7 cut(s) | 82, 460, 1416, 1427, 1433, 1439, 1445 |
| BstSCI | CCNGG | 1 cut(s) | 1305 |
| BstSFI | CTRYAG | 1 cut(s) | 833 |
| BstSLI | GKGCMC | 1 cut(s) | 751 |
| BstUI | CGCG | 1 cut(s) | 1210 |
| BstV1I | GCAGC | 2 cut(s) | 534, 537 |
| BstX2I | RGATCY | 1 cut(s) | 1582 |
| BstYI | RGATCY | 1 cut(s) | 1582 |
| BstZ17I | GTATAC | 1 cut(s) | 1113 |
| BsuRI | GGCC | 2 cut(s) | 824, 1290 |
| BtsCI | GGATG | 1 cut(s) | 525 |
| BtsI | GCAGTG | 1 cut(s) | 830 |
| BtsIMutI | CAGTG | 3 cut(s) | 430, 796, 830 |
| Cac8I | GCNNGC | 3 cut(s) | 639, 1210, 1614 |
| CaiI | CAGNNNCTG | 2 cut(s) | 782, 1156 |
| CfoI | GCGC | 2 cut(s) | 1210, 1212 |
| CsiI | ACCWGGT | 1 cut(s) | 1305 |
| Csp6I | GTAC | 2 cut(s) | 991, 1588 |
| CviQI | GTAC | 2 cut(s) | 991, 1588 |
| DdeI | CTNAG | 2 cut(s) | 485, 1622 |
| DpnI | GATC | 4 cut(s) | 506, 1448, 1584, 1608 |
| DpnII | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| DraI | TTTAAA | 1 cut(s) | 699 |
| DraIII | CACNNNGTG | 1 cut(s) | 434 |
| Eam1104I | CTCTTC | 3 cut(s) | 129, 832, 1034 |
| EarI | CTCTTC | 3 cut(s) | 129, 832, 1034 |
| Ecl136II | GAGCTC | 1 cut(s) | 408 |
| Eco130I | CCWWGG | 1 cut(s) | 1240 |
| Eco24I | GRGCYC | 1 cut(s) | 410 |
| Eco53kI | GAGCTC | 1 cut(s) | 408 |
| Eco57I | CTGAAG | 1 cut(s) | 269 |
| EcoICRI | GAGCTC | 1 cut(s) | 408 |
| EcoRII | CCWGG | 1 cut(s) | 1305 |
| EcoT14I | CCWWGG | 1 cut(s) | 1240 |
| EcoT22I | ATGCAT | 2 cut(s) | 454, 525 |
| EcoT38I | GRGCYC | 1 cut(s) | 410 |
| ErhI | CCWWGG | 1 cut(s) | 1240 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1714 |
| FaqI | GGGAC | 3 cut(s) | 308, 554, 1414 |
| FbaI | TGATCA | 2 cut(s) | 504, 1606 |
| FblI | GTMKAC | 1 cut(s) | 1112 |
| Fnu4HI | GCNGC | 2 cut(s) | 548, 551 |
| FokI | GGATG | 1 cut(s) | 532 |
| FriOI | GRGCYC | 1 cut(s) | 410 |
| Fsp4HI | GCNGC | 2 cut(s) | 548, 551 |
| FspBI | CTAG | 3 cut(s) | 300, 1142, 1278 |
| GlaI | GCGC | 2 cut(s) | 1209, 1211 |
| GluI | GCNGC | 2 cut(s) | 548, 551 |
| HaeIII | GGCC | 2 cut(s) | 824, 1290 |
| HapII | CCGG | 1 cut(s) | 471 |
| HhaI | GCGC | 2 cut(s) | 1210, 1212 |
| Hin6I | GCGC | 2 cut(s) | 1208, 1210 |
| HinP1I | GCGC | 2 cut(s) | 1208, 1210 |
| HincII | GTYRAC | 1 cut(s) | 84 |
| HindII | GTYRAC | 1 cut(s) | 84 |
| HinfI | GANTC | 8 cut(s) | 167, 725, 1001, 1153, 1282, 1559, 1627, 1715 |
| HpaII | CCGG | 1 cut(s) | 471 |
| HphI | GGTGA | 3 cut(s) | 953, 1258, 1568 |
| Hpy166II | GTNNAC | 3 cut(s) | 84, 749, 1113 |
| Hpy188III | TCNNGA | 9 cut(s) | 26, 74, 151, 242, 541, 961, 971, 1014, 1676 |
| Hpy8I | GTNNAC | 3 cut(s) | 84, 749, 1113 |
| HpyAV | CCTTC | 6 cut(s) | 108, 369, 698, 1099, 1333, 1380 |
| HpyCH4III | ACNGT | 1 cut(s) | 434 |
| HpyCH4IV | ACGT | 1 cut(s) | 1129 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 364, 1538, 1655, 1664 |
| HpyF3I | CTNAG | 2 cut(s) | 485, 1622 |
| HpySE526I | ACGT | 1 cut(s) | 1129 |
| HspAI | GCGC | 2 cut(s) | 1208, 1210 |
| Ksp22I | TGATCA | 2 cut(s) | 504, 1606 |
| Kzo9I | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| LmnI | GCTCC | 2 cut(s) | 1057, 1646 |
| Lsp1109I | GCAGC | 2 cut(s) | 534, 537 |
| LweI | GCATC | 3 cut(s) | 510, 1550, 1645 |
| MabI | ACCWGGT | 1 cut(s) | 1305 |
| MaeI | CTAG | 3 cut(s) | 300, 1142, 1278 |
| MaeII | ACGT | 1 cut(s) | 1129 |
| MaeIII | GTNAC | 2 cut(s) | 1556, 1597 |
| MalI | GATC | 4 cut(s) | 506, 1448, 1584, 1608 |
| MboI | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| MboII | GAAGA | 5 cut(s) | 146, 210, 819, 1021, 1493 |
| MfeI | CAATTG | 1 cut(s) | 689 |
| MflI | RGATCY | 1 cut(s) | 1582 |
| MhlI | GDGCHC | 2 cut(s) | 410, 751 |
| MlyI | GAGTC | 3 cut(s) | 161, 1162, 1553 |
| MmeI | TCCRAC | 1 cut(s) | 1686 |
| Mph1103I | ATGCAT | 2 cut(s) | 454, 525 |
| MroXI | GAANNNNTTC | 1 cut(s) | 784 |
| MseI | TTAA | 4 cut(s) | 680, 698, 935, 1047 |
| MslI | CAYNNNNRTG | 7 cut(s) | 699, 1217, 1341, 1428, 1434, 1440, 1454 |
| MspCI | CTTAAG | 1 cut(s) | 934 |
| MspI | CCGG | 1 cut(s) | 471 |
| MspR9I | CCNGG | 1 cut(s) | 1307 |
| MunI | CAATTG | 1 cut(s) | 689 |
| Mva1269I | GAATGC | 2 cut(s) | 21, 454 |
| MvaI | CCWGG | 1 cut(s) | 1307 |
| MvnI | CGCG | 1 cut(s) | 1210 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 364, 1538, 1655, 1664 |
| NdeII | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| NlaIV | GGNNCC | 1 cut(s) | 787 |
| NmuCI | GTSAC | 1 cut(s) | 1556 |
| NsiI | ATGCAT | 2 cut(s) | 454, 525 |
| NspI | RCATGY | 7 cut(s) | 82, 460, 1416, 1427, 1433, 1439, 1445 |
| NspV | TTCGAA | 1 cut(s) | 1453 |
| PauI | GCGCGC | 1 cut(s) | 1208 |
| PciI | ACATGT | 3 cut(s) | 78, 456, 1412 |
| PctI | GAATGC | 2 cut(s) | 21, 454 |
| PdmI | GAANNNNTTC | 1 cut(s) | 784 |
| PfeI | GAWTC | 5 cut(s) | 725, 1001, 1282, 1627, 1715 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1156 |
| PkrI | GCNGC | 2 cut(s) | 549, 552 |
| PleI | GAGTC | 3 cut(s) | 161, 1161, 1553 |
| PpsI | GAGTC | 3 cut(s) | 161, 1161, 1553 |
| Ppu21I | YACGTR | 1 cut(s) | 1130 |
| PscI | ACATGT | 3 cut(s) | 78, 456, 1412 |
| PsiI | TTATAA | 2 cut(s) | 1254, 1571 |
| Psp124BI | GAGCTC | 1 cut(s) | 410 |
| Psp6I | CCWGG | 1 cut(s) | 1305 |
| PspGI | CCWGG | 1 cut(s) | 1305 |
| PspN4I | GGNNCC | 1 cut(s) | 787 |
| PstI | CTGCAG | 1 cut(s) | 837 |
| PstNI | CAGNNNCTG | 2 cut(s) | 782, 1156 |
| PsuI | RGATCY | 1 cut(s) | 1582 |
| PteI | GCGCGC | 1 cut(s) | 1208 |
| RsaI | GTAC | 2 cut(s) | 992, 1589 |
| RsaNI | GTAC | 2 cut(s) | 991, 1588 |
| RseI | CAYNNNNRTG | 7 cut(s) | 699, 1217, 1341, 1428, 1434, 1440, 1454 |
| SacI | GAGCTC | 1 cut(s) | 410 |
| SaqAI | TTAA | 4 cut(s) | 680, 698, 935, 1047 |
| SatI | GCNGC | 2 cut(s) | 548, 551 |
| Sau3AI | GATC | 4 cut(s) | 504, 1446, 1582, 1606 |
| SchI | GAGTC | 3 cut(s) | 161, 1162, 1553 |
| ScrFI | CCNGG | 1 cut(s) | 1307 |
| SduI | GDGCHC | 2 cut(s) | 410, 751 |
| SexAI | ACCWGGT | 1 cut(s) | 1305 |
| SfaNI | GCATC | 3 cut(s) | 510, 1550, 1645 |
| SfcI | CTRYAG | 1 cut(s) | 833 |
| SfuI | TTCGAA | 1 cut(s) | 1453 |
| SmiI | ATTTAAAT | 1 cut(s) | 699 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 699, 1217, 1341, 1428, 1434, 1440, 1454 |
| SmlI | CTYRAG | 3 cut(s) | 752, 934, 1688 |
| SmoI | CTYRAG | 3 cut(s) | 752, 934, 1688 |
| SpeI | ACTAGT | 1 cut(s) | 299 |
| SspI | AATATT | 2 cut(s) | 1045, 1120 |
| SspMI | CTAG | 3 cut(s) | 300, 1142, 1278 |
| SstI | GAGCTC | 1 cut(s) | 410 |
| StyD4I | CCNGG | 1 cut(s) | 1305 |
| StyI | CCWWGG | 1 cut(s) | 1240 |
| SwaI | ATTTAAAT | 1 cut(s) | 699 |
| TaaI | ACNGT | 1 cut(s) | 434 |
| TaiI | ACGT | 1 cut(s) | 1132 |
| TaqI | TCGA | 2 cut(s) | 881, 1453 |
| TatI | WGTACW | 1 cut(s) | 1587 |
| TfiI | GAWTC | 5 cut(s) | 725, 1001, 1282, 1627, 1715 |
| Tru1I | TTAA | 4 cut(s) | 680, 698, 935, 1047 |
| Tru9I | TTAA | 4 cut(s) | 680, 698, 935, 1047 |
| TscAI | CASTG | 3 cut(s) | 437, 796, 837 |
| TseFI | GTSAC | 1 cut(s) | 1556 |
| TseI | GCWGC | 2 cut(s) | 547, 550 |
| Tsp45I | GTSAC | 1 cut(s) | 1556 |
| TspDTI | ATGAA | 8 cut(s) | 194, 461, 717, 998, 1186, 1422, 1464, 1513 |
| TspRI | CASTG | 3 cut(s) | 437, 796, 837 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1156 |
| Vha464I | CTTAAG | 1 cut(s) | 934 |
| VneI | GTGCAC | 1 cut(s) | 747 |
| XapI | RAATTY | 4 cut(s) | 123, 532, 1316, 1679 |
| XceI | RCATGY | 7 cut(s) | 82, 460, 1416, 1427, 1433, 1439, 1445 |
| XmiI | GTMKAC | 1 cut(s) | 1112 |
| XmnI | GAANNNNTTC | 1 cut(s) | 784 |
| XspI | CTAG | 3 cut(s) | 300, 1142, 1278 |
| Zsp2I | ATGCAT | 2 cut(s) | 454, 525 |