Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001120

Physical Location & Seq

Genomic Coordinates Reverse (-)

1149295 .. 1150663

Gene Structure 1369 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G03760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGTCATCATCATCATCAGTTCCTGCTTACTTGGGAGATGAAGATCTGACACAAGAAACAAGAGCTCTGATCTCTTCTCTTCCTAAAGAGAAAGGTTGGTTAGTGAGTGAAATATATGAATTCCAAGGACTTTGGCACACACAAGCTATTTTACAAGGAATCTTGATCTGCCAAAAACGCTTTGAAGCTAAAGATTCCGACATTATCCTCGTCACTAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTGCTCTCCTTAACCGACACAAGTTTCCAGTTTCTTCTTCTGGTAACCATCCTCTTCTGGTCACCAATCCACACCTTCTTGTGCCCTTCTTGGAAGGAGTTTACTACGAGTCCCCAGATTTCGATTTCTCCAGTTTGCCTTCTCCAAGACTGATGAACACGCACATATCGCATCTTTCGCTCCCCGAGTCTGTTAAGAGCTCGTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTCCTTATGGCATTTTGGGAAAAAGCTAGCTCCTGAGGAAACCGCGGATTATCCTATCGAAAAAGCGGTTGAAGCGTTTTGTGAAGGGAAGTTTATAGGTGGACCCTTTTGGGATCATATATTGGAGTACTGGTATGCAAGCCGCGAGAATCCGAACAAGGTCTTGTTTGTTACTTACGAGGAGCTAAAGAAGCAGACCGAAGTTGAGATGAAGCGGATCGCGGAGTTCTTGGAATGTGGCTTTATTGAAGAAGAAGAAGTGAGAGAGATTGTGAAGTTGTGTAGCTTTGAGAGTTTAAGTAATTTGGAAGTTAACAAAGAAGGGAAATTGCCAAATGGAATAGAGACTAAAACTTTCTTTAGAAAAGGAGAGATTGGAGGATGGAGAGATACTTTGAGTGAGTCATTGGCAGAGGAAATTGATAGAACCATTGAAGAGAAGTTTAAAGGTTCTGGTCTTAAATTTTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006629 GO:0006950 GO:0006952 GO:0006970 GO:0008146 GO:0008150 GO:0008152 GO:0008202 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009751 GO:0009812 GO:0010033 GO:0010817 GO:0012505 GO:0014070 GO:0016128 GO:0016131 GO:0016740 GO:0016782 GO:0042221 GO:0042445 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0080118 GO:1901360 GO:1901615 GO:1901700 GO:1990135

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

326

Amino Acids

37.14

Weight (kDa)

5.36

Isoelectric Point (pI)

58.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfotransfer_1	PF00685	65 - 321	6.2e-77	Sulfotransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28170 AT2G03760 AT2G27570 AT3G45070 AT3G45070 AT3G45070 AT3G45080 AT5G43690
fragaria_vesca	FvH4_4g29330 FvH4_4g29331 FvH4_4g29332 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29751
malus_domestica	MD16G1055600.v1.1 MD16G1055700.v1.1 MD16G1055800.v1.1 MD16G1056100.v1.1
prunus_persica	Prupe.1G293200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0437381 RchiOBHm_Chr4g0437391 RchiOBHm_Chr7g0233341
rosa_laevigata	RLG00000006442 RLG00000013880
rosa_multiflora	Rmu_sc0004759.1_g000009 Rmu_sc0004759.1_g000010 Rmu_sc0010228.1_g000003 Rmu_sc0010228.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227360 Rroxscaffold_5G00378530 Rroxscaffold_5G00378560 Rroxscaffold_5G00378630
rosa_rugosa	Rorug04G0300400 Rorug04G0300500 Rorug04G0300600 Rorug04G0301000
rosa_samantha	Rh4AG355300 Rh4BG365000 Rh4BG365100 Rh4BG365400 Rh4BG365500 Rh4CG379200 Rh4CG379300 Rh4CG379600 Rh4CG379700 Rh4DG359000 Rh4DG359100 Rh4DG359300 Rh5DG503800 Rh7CG455200
rosa_wichuraiana	Rw0G022450 Rw4G031140 Rw4G031170 Rw4G031180 Rw7G035860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	230
AccB1I	GGYRCC	1 cut(s)	230
AccII	CGCG	3 cut(s)	551, 651, 728
AciI	CCGC	6 cut(s)	549, 551, 572, 649, 721, 728
AclWI	GGATC	2 cut(s)	627, 731
AcsI	RAATTY	2 cut(s)	119, 968
AfaI	GTAC	2 cut(s)	232, 635
AfiI	CCNNNNNNNGG	1 cut(s)	227
AflIII	ACRYGT	1 cut(s)	498
AgsI	TTSAA	4 cut(s)	185, 578, 755, 941
AluBI	AGCT	9 cut(s)	65, 146, 188, 248, 456, 532, 536, 691, 792
AluI	AGCT	9 cut(s)	65, 146, 188, 248, 456, 532, 536, 691, 792
Alw21I	GWGCWC	2 cut(s)	67, 458
Alw26I	GTCTC	1 cut(s)	845
AlwI	GGATC	2 cut(s)	627, 731
AlwNI	CAGNNNCTG	1 cut(s)	23
Ama87I	CYCGRG	1 cut(s)	440
ApoI	RAATTY	2 cut(s)	119, 968
Asp718I	GGTACC	1 cut(s)	230
AspS9I	GGNCC	1 cut(s)	608
AsuHPI	GGTGA	1 cut(s)	310
AsuNHI	GCTAGC	1 cut(s)	532
AvaI	CYCGRG	1 cut(s)	440
AvaII	GGWCC	1 cut(s)	608
AxyI	CCTNAGG	2 cut(s)	492, 540
BaeGI	GKGCMC	1 cut(s)	342
BanI	GGYRCC	1 cut(s)	230
BanII	GRGCYC	2 cut(s)	67, 458
Bbv12I	GWGCWC	2 cut(s)	67, 458
BccI	CCATC	2 cut(s)	312, 882
BcoDI	GTCTC	1 cut(s)	845
BfaI	CTAG	1 cut(s)	533
BglII	AGATCT	1 cut(s)	43
BisI	GCNGC	1 cut(s)	649
BlsI	GCNGC	1 cut(s)	650
BmcAI	AGTACT	1 cut(s)	635
Bme18I	GGWCC	1 cut(s)	608
BmeT110I	CYCGRG	1 cut(s)	440
BmgT120I	GGNCC	1 cut(s)	608
BmiI	GGNNCC	3 cut(s)	232, 488, 610
BmsI	GCATC	1 cut(s)	436
BmtI	GCTAGC	1 cut(s)	536
BpmI	CTGGAG	1 cut(s)	370
BsaBI	GATNNNNATC	1 cut(s)	42
BsaJI	CCNNGG	2 cut(s)	124, 549
BsaXI	ACNNNNNCTCC	2 cut(s)	623, 653
Bsc4I	CCNNNNNNNGG	1 cut(s)	227
Bse1I	ACTGG	3 cut(s)	284, 387, 641
Bse21I	CCTNAGG	2 cut(s)	492, 540
Bse8I	GATNNNNATC	1 cut(s)	42
BseDI	CCNNGG	2 cut(s)	124, 549
BseGI	GGATG	2 cut(s)	304, 893
BseJI	GATNNNNATC	1 cut(s)	42
BseLI	CCNNNNNNNGG	1 cut(s)	227
BseMII	CTCAG	1 cut(s)	531
BseNI	ACTGG	3 cut(s)	284, 387, 641
BseRI	GAGGAG	1 cut(s)	701
BseSI	GKGCMC	1 cut(s)	342
Bsh1236I	CGCG	3 cut(s)	551, 651, 728
BshNI	GGYRCC	1 cut(s)	230
BsiHKAI	GWGCWC	2 cut(s)	67, 458
BsiHKCI	CYCGRG	1 cut(s)	440
BslFI	GGGAC	1 cut(s)	352
BslI	CCNNNNNNNGG	1 cut(s)	227
BsmAI	GTCTC	1 cut(s)	845
BsmFI	GGGAC	1 cut(s)	352
BsoBI	CYCGRG	1 cut(s)	440
Bsp1286I	GDGCHC	3 cut(s)	67, 342, 458
Bsp143I	GATC	5 cut(s)	43, 69, 165, 619, 723
BspACI	CCGC	6 cut(s)	549, 551, 572, 649, 721, 728
BspCNI	CTCAG	1 cut(s)	532
BspFNI	CGCG	3 cut(s)	551, 651, 728
BspLI	GGNNCC	3 cut(s)	232, 488, 610
BspOI	GCTAGC	1 cut(s)	536
BspPI	GGATC	2 cut(s)	627, 731
BspT107I	GGYRCC	1 cut(s)	230
BsrI	ACTGG	3 cut(s)	284, 387, 641
BssECI	CCNNGG	2 cut(s)	124, 549
BssMI	GATC	5 cut(s)	43, 69, 165, 619, 723
BssT1I	CCWWGG	1 cut(s)	124
Bst6I	CTCTTC	4 cut(s)	79, 84, 315, 936
BstC8I	GCNNGC	2 cut(s)	534, 646
BstDEI	CTNAG	2 cut(s)	492, 540
BstDSI	CCRYGG	1 cut(s)	549
BstEII	GGTNACC	2 cut(s)	299, 316
BstENI	CCTNNNNNAGG	1 cut(s)	225
BstF5I	GGATG	2 cut(s)	304, 893
BstFNI	CGCG	3 cut(s)	551, 651, 728
BstKTI	GATC	5 cut(s)	46, 72, 168, 622, 726
BstMAI	GTCTC	1 cut(s)	845
BstMBI	GATC	5 cut(s)	43, 69, 165, 619, 723
BstMWI	GCNNNNNNNGC	5 cut(s)	177, 424, 433, 578, 697
BstNSI	RCATGY	1 cut(s)	502
BstPI	GGTNACC	2 cut(s)	299, 316
BstSLI	GKGCMC	1 cut(s)	342
BstUI	CGCG	3 cut(s)	551, 651, 728
BstX2I	RGATCY	1 cut(s)	43
BstYI	RGATCY	1 cut(s)	43
Bsu36I	CCTNAGG	2 cut(s)	492, 540
BtgI	CCRYGG	1 cut(s)	549
BtsCI	GGATG	2 cut(s)	304, 893
Cac8I	GCNNGC	2 cut(s)	534, 646
CaiI	CAGNNNCTG	1 cut(s)	23
Cfr13I	GGNCC	1 cut(s)	608
Cfr42I	CCGCGG	1 cut(s)	552
Csp6I	GTAC	2 cut(s)	231, 634
CviAII	CATG	1 cut(s)	499
CviQI	GTAC	2 cut(s)	231, 634
DdeI	CTNAG	2 cut(s)	492, 540
DpnI	GATC	5 cut(s)	45, 71, 167, 621, 725
DpnII	GATC	5 cut(s)	43, 69, 165, 619, 723
DraI	TTTAAA	1 cut(s)	952
Eam1104I	CTCTTC	4 cut(s)	79, 84, 315, 936
EarI	CTCTTC	4 cut(s)	79, 84, 315, 936
Ecl136II	GAGCTC	2 cut(s)	65, 456
Eco130I	CCWWGG	1 cut(s)	124
Eco24I	GRGCYC	2 cut(s)	67, 458
Eco47I	GGWCC	1 cut(s)	608
Eco53kI	GAGCTC	2 cut(s)	65, 456
Eco81I	CCTNAGG	2 cut(s)	492, 540
Eco88I	CYCGRG	1 cut(s)	440
Eco91I	GGTNACC	2 cut(s)	299, 316
EcoICRI	GAGCTC	2 cut(s)	65, 456
EcoNI	CCTNNNNNAGG	1 cut(s)	225
EcoO65I	GGTNACC	2 cut(s)	299, 316
EcoRI	GAATTC	1 cut(s)	119
EcoT14I	CCWWGG	1 cut(s)	124
EcoT38I	GRGCYC	2 cut(s)	67, 458
ErhI	CCWWGG	1 cut(s)	124
FaeI	CATG	1 cut(s)	502
FaiI	YATR	9 cut(s)	115, 117, 422, 500, 514, 602, 624, 626, 642
FaqI	GGGAC	1 cut(s)	352
FatI	CATG	1 cut(s)	498
Fnu4HI	GCNGC	1 cut(s)	649
FokI	GGATG	2 cut(s)	291, 900
FriOI	GRGCYC	2 cut(s)	67, 458
Fsp4HI	GCNGC	1 cut(s)	649
FspBI	CTAG	1 cut(s)	533
GluI	GCNGC	1 cut(s)	649
GsuI	CTGGAG	1 cut(s)	370
Hin1II	CATG	1 cut(s)	502
HincII	GTYRAC	1 cut(s)	820
HindII	GTYRAC	1 cut(s)	820
HinfI	GANTC	6 cut(s)	159, 194, 365, 443, 655, 908
HpaI	GTTAAC	1 cut(s)	820
HphI	GGTGA	1 cut(s)	310
Hpy166II	GTNNAC	3 cut(s)	358, 608, 820
Hpy188I	TCNGA	4 cut(s)	48, 69, 199, 660
Hpy188III	TCNNGA	3 cut(s)	163, 539, 978
Hpy8I	GTNNAC	3 cut(s)	358, 608, 820
HpyAV	CCTTC	6 cut(s)	341, 344, 352, 405, 584, 821
HpyCH4V	TGCA	1 cut(s)	644
HpyF10VI	GCNNNNNNNGC	5 cut(s)	177, 424, 433, 578, 697
HpyF3I	CTNAG	2 cut(s)	492, 540
Hsp92II	CATG	1 cut(s)	502
KpnI	GGTACC	1 cut(s)	234
KspAI	GTTAAC	1 cut(s)	820
KspI	CCGCGG	1 cut(s)	552
Kzo9I	GATC	5 cut(s)	43, 69, 165, 619, 723
LmnI	GCTCC	3 cut(s)	441, 541, 688
LweI	GCATC	1 cut(s)	436
MaeI	CTAG	1 cut(s)	533
MaeIII	GTNAC	4 cut(s)	211, 299, 316, 676
MalI	GATC	5 cut(s)	45, 71, 167, 621, 725
MboI	GATC	5 cut(s)	43, 69, 165, 619, 723
MflI	RGATCY	1 cut(s)	43
MhlI	GDGCHC	3 cut(s)	67, 342, 458
MluCI	AATT	5 cut(s)	119, 808, 833, 924, 968
MlyI	GAGTC	3 cut(s)	374, 452, 917
MmeI	TCCRAC	1 cut(s)	222
MnlI	CCTC	6 cut(s)	218, 318, 535, 679, 878, 913
MseI	TTAA	7 cut(s)	242, 267, 450, 803, 819, 951, 966
MslI	CAYNNNNRTG	1 cut(s)	503
MspA1I	CMGCKG	1 cut(s)	551
MvnI	CGCG	3 cut(s)	551, 651, 728
MwoI	GCNNNNNNNGC	5 cut(s)	177, 424, 433, 578, 697
NdeII	GATC	5 cut(s)	43, 69, 165, 619, 723
NheI	GCTAGC	1 cut(s)	532
NlaIII	CATG	1 cut(s)	502
NlaIV	GGNNCC	3 cut(s)	232, 488, 610
NmuCI	GTSAC	2 cut(s)	211, 316
NspI	RCATGY	1 cut(s)	502
PciI	ACATGT	1 cut(s)	498
PfeI	GAWTC	3 cut(s)	159, 194, 655
PkrI	GCNGC	1 cut(s)	650
PleI	GAGTC	3 cut(s)	373, 451, 916
PpsI	GAGTC	3 cut(s)	373, 451, 916
PscI	ACATGT	1 cut(s)	498
Psp124BI	GAGCTC	2 cut(s)	67, 458
PspEI	GGTNACC	2 cut(s)	299, 316
PspN4I	GGNNCC	3 cut(s)	232, 488, 610
PspPI	GGNCC	1 cut(s)	608
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	1 cut(s)	43
RsaI	GTAC	2 cut(s)	232, 635
RsaNI	GTAC	2 cut(s)	231, 634
RseI	CAYNNNNRTG	1 cut(s)	503
SacI	GAGCTC	2 cut(s)	67, 458
SacII	CCGCGG	1 cut(s)	552
SaqAI	TTAA	7 cut(s)	242, 267, 450, 803, 819, 951, 966
SatI	GCNGC	1 cut(s)	649
Sau3AI	GATC	5 cut(s)	43, 69, 165, 619, 723
Sau96I	GGNCC	1 cut(s)	608
ScaI	AGTACT	1 cut(s)	635
SchI	GAGTC	3 cut(s)	374, 452, 917
SduI	GDGCHC	3 cut(s)	67, 342, 458
SfaNI	GCATC	1 cut(s)	436
Sfr303I	CCGCGG	1 cut(s)	552
SgrBI	CCGCGG	1 cut(s)	552
SinI	GGWCC	1 cut(s)	608
SmiMI	CAYNNNNRTG	1 cut(s)	503
Sse9I	AATT	5 cut(s)	119, 808, 833, 924, 968
SsiI	CCGC	6 cut(s)	549, 551, 572, 649, 721, 728
SspMI	CTAG	1 cut(s)	533
SstI	GAGCTC	2 cut(s)	67, 458
StyI	CCWWGG	1 cut(s)	124
TaqI	TCGA	2 cut(s)	378, 564
TaqII	GACCGA	1 cut(s)	719
TasI	AATT	5 cut(s)	119, 808, 833, 924, 968
TatI	WGTACW	1 cut(s)	633
TauI	GCSGC	1 cut(s)	651
TfiI	GAWTC	3 cut(s)	159, 194, 655
Tru1I	TTAA	7 cut(s)	242, 267, 450, 803, 819, 951, 966
Tru9I	TTAA	7 cut(s)	242, 267, 450, 803, 819, 951, 966
TseFI	GTSAC	2 cut(s)	211, 316
Tsp45I	GTSAC	2 cut(s)	211, 316
TspDTI	ATGAA	4 cut(s)	54, 132, 425, 731
VpaK11BI	GGWCC	1 cut(s)	608
XagI	CCTNNNNNAGG	1 cut(s)	225
XapI	RAATTY	2 cut(s)	119, 968
XceI	RCATGY	1 cut(s)	502
XspI	CTAG	1 cut(s)	533
ZrmI	AGTACT	1 cut(s)	635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.