Rh4CG379700

Belongs to the sulfotransferase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0001120
Physical Location & Seq
Forward (+)
63199449 .. 63209967
10519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG379700.1

Sequence Viewer

Length: 1308 bp
ATGTCACTACCTCAAATTCCTTCTTCTCTTCCCCAACACTCGCAACAATTTGAGCTCAGCCAAGAAACCAGAGACCTAATATCCACGCTTCCTGCTGAGAAGGGATTGATTTCAGGTCATTTACATCAGTACCAGGGCTTTTGGTACCCCACTATGCATATCCAAAAAATTTTAGCCTCCCAGAAACACTTTCAAGCTCGAGATACTGATATCCTTCTTGCTACTACTCCCAAATCAGGCACCACTTGGCTCAAGGCAATTCTGTTTGCGCTAGTAAAGCGAGTGCACTATCATCCAGACCCACAAAACATGGACCACCCTTTGCTCACAAACAACCCTCATGTTCTTGTGCCCTTCTTGGAGAATAAGCAGTCCGGTAAGAACCAGATTCCTGACCCCACCTCCTATGCCCCTCCCAGGCTCTTTTCAACTCACTTACCACTAGCGCATCTGCCACAATCTGTTAAAGACTCTGCTTGCAAGGTCGTCTATCTGTGTAGAAACCCTAAGGACATAATAGTTTCACTTTGGCACTTCACAAACAGAGTGAGACACAAGAGTATGGGAACCAATTCACTTGAAGAAGTATTGGAATACTTCTGCAGGGGAGTGACTGGGTATGGACCCTTTTGGGATCATGTGTTGGGCTATTGGAAGGAGAGCTTGGAAGGGCCTGAAACGGTGTTTTTCATCAAATATGAGGAAATGAAAGAAAAACCTGGTCTGCAGTTGAGGAGGCTAGCTGAGTTCTTGGGGTGCCCATTTTCACCGGAAGAAGAGGCACAGGGAGTGGTGGACAATATCTTAAGGCTGTGTAGTTTTGAGAATTTGAGCAATTTGGATGTGAACAAAAACGAGAAATTATCGACAGGGCTGGAGAATAGTGCATTCTTTCGGCGAGGGGAGGCGGGAGACTGGAGGAACTATTTGACAGCTGAGATGGTGGAACAGCTAGACCGTATCATTGAAGAGAAGTTGCAAGATGCCGCTTTCATCTTCCCTCACTTTCGTTTTCCTTTGTTGAGTTTGCTCTTTCACTCAATCACCCCAAAAATCCCCAAATCCCCATTCAATTTTTTAAATCTCAATGACGAAGGAGTTCGCCGTACCACCTCCGGTGTTTCCCTCGGGCAGAAACCCCAGCGCCAGATCCAACAACATCCAATAACGCCAGATGGCGACGGCGCCATTTCAACCGCCTCGATCCTCCACCTCCAGCATCTCCTTCATGACCTTCGACATTGGCTCCGCTGCCGCCTCCTCCTCCTCCGGGTAAGATTCCTTTCTCAAATCTTTCAAAACCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1

Protein Analysis

435

Amino Acids

50.02

Weight (kDa)

8.16

Isoelectric Point (pI)

48.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_1 PF00685 68 - 328 8.8e-78 Sulfotransferase domain
Sulfotransfer_3 PF13469 161 - 256 6.4e-07 Sulfotransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 144
AccB1I GGYRCC 4 cut(s) 144, 239, 756, 1184
AciI CCGC 5 cut(s) 908, 987, 1197, 1249, 1255
AclWI GGATC 3 cut(s) 642, 1144, 1198
AcsI RAATTY 3 cut(s) 15, 168, 826
AcyI GRCGYC 1 cut(s) 1185
AfaI GTAC 3 cut(s) 131, 146, 1108
AfiI CCNNNNNNNGG 3 cut(s) 236, 417, 1270
AflII CTTAAG 1 cut(s) 805
AgsI TTSAA 7 cut(s) 194, 429, 581, 968, 1072, 1194, 1298
AjnI CCWGG 3 cut(s) 132, 416, 718
AjuI GAANNNNNNNTTGG 4 cut(s) 647, 679, 1052, 1084
AluBI AGCT 6 cut(s) 55, 197, 663, 743, 935, 952
AluI AGCT 6 cut(s) 55, 197, 663, 743, 935, 952
Alw21I GWGCWC 2 cut(s) 57, 288
Alw26I GTCTC 3 cut(s) 66, 544, 906
Alw44I GTGCAC 1 cut(s) 284
AlwI GGATC 3 cut(s) 642, 1144, 1198
Ama87I CYCGRG 2 cut(s) 198, 1127
AoxI GGCC 1 cut(s) 671
ApaLI GTGCAC 1 cut(s) 284
ApeKI GCWGC 1 cut(s) 1251
ApoI RAATTY 3 cut(s) 15, 168, 826
Asp700I GAANNNNTTC 2 cut(s) 571, 1098
Asp718I GGTACC 1 cut(s) 144
AspLEI GCGC 4 cut(s) 271, 448, 1146, 1187
AspS9I GGNCC 3 cut(s) 313, 623, 671
AsuC2I CCSGG 1 cut(s) 1271
AsuHPI GGTGA 2 cut(s) 759, 1036
AsuNHI GCTAGC 1 cut(s) 739
AvaI CYCGRG 2 cut(s) 198, 1127
AvaII GGWCC 2 cut(s) 313, 623
AxyI CCTNAGG 1 cut(s) 507
BaeGI GKGCMC 3 cut(s) 288, 354, 761
BaeI ACNNNNGTAYC 2 cut(s) 113, 146
BanI GGYRCC 4 cut(s) 144, 239, 756, 1184
BanII GRGCYC 1 cut(s) 57
Bbv12I GWGCWC 2 cut(s) 57, 288
BbvI GCAGC 1 cut(s) 1238
BccI CCATC 2 cut(s) 934, 1169
BceAI ACGGC 2 cut(s) 1089, 1198
BciT130I CCWGG 3 cut(s) 134, 418, 720
BcnI CCSGG 1 cut(s) 1271
BcoDI GTCTC 3 cut(s) 66, 544, 906
BfaI CTAG 4 cut(s) 272, 443, 740, 953
BfmI CTRYAG 2 cut(s) 601, 725
BfoI RGCGCY 2 cut(s) 1147, 1188
BfrI CTTAAG 1 cut(s) 805
BisI GCNGC 3 cut(s) 987, 1252, 1255
BlpI GCTNAGC 1 cut(s) 56
BlsI GCNGC 3 cut(s) 988, 1253, 1256
Bme1390I CCNGG 4 cut(s) 134, 418, 720, 1271
Bme18I GGWCC 2 cut(s) 313, 623
BmeT110I CYCGRG 2 cut(s) 198, 1127
BmgT120I GGNCC 3 cut(s) 313, 623, 671
BmiI GGNNCC 7 cut(s) 146, 241, 568, 625, 758, 1186, 1247
BmrFI CCNGG 4 cut(s) 134, 418, 720, 1271
BmrI ACTGGG 1 cut(s) 624
BmsI GCATC 3 cut(s) 457, 973, 1228
BmtI GCTAGC 1 cut(s) 743
BmuI ACTGGG 1 cut(s) 624
BpmI CTGGAG 3 cut(s) 896, 937, 1199
Bpu1102I GCTNAGC 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 236
BpuMI CCSGG 1 cut(s) 1271
BsaHI GRCGYC 1 cut(s) 1185
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 3 cut(s) 133, 416, 1126
BsaWI WCCGGW 3 cut(s) 374, 769, 1115
BsaXI ACNNNNNCTCC 4 cut(s) 386, 416, 1230, 1260
Bsc4I CCNNNNNNNGG 3 cut(s) 236, 417, 1270
Bse1I ACTGG 2 cut(s) 619, 920
Bse21I CCTNAGG 1 cut(s) 507
BseBI CCWGG 3 cut(s) 134, 418, 720
BseDI CCNNGG 3 cut(s) 133, 416, 1126
BseGI GGATG 3 cut(s) 292, 847, 1159
BseLI CCNNNNNNNGG 3 cut(s) 236, 417, 1270
BseMII CTCAG 4 cut(s) 70, 87, 735, 927
BseNI ACTGG 2 cut(s) 619, 920
BseRI GAGGAG 4 cut(s) 748, 1250, 1253, 1256
BseSI GKGCMC 3 cut(s) 288, 354, 761
BseXI GCAGC 1 cut(s) 1238
BseYI CCCAGC 1 cut(s) 1140
BshFI GGCC 1 cut(s) 673
BshNI GGYRCC 4 cut(s) 144, 239, 756, 1184
BsiHKAI GWGCWC 2 cut(s) 57, 288
BsiHKCI CYCGRG 2 cut(s) 198, 1127
BsiSI CCGG 4 cut(s) 375, 770, 1116, 1270
BslI CCNNNNNNNGG 3 cut(s) 236, 417, 1270
BsmAI GTCTC 3 cut(s) 66, 544, 906
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 1 cut(s) 673
Bso31I GGTCTC 1 cut(s) 66
BsoBI CYCGRG 2 cut(s) 198, 1127
Bsp1286I GDGCHC 4 cut(s) 57, 288, 354, 761
Bsp143I GATC 3 cut(s) 634, 1149, 1203
Bsp1720I GCTNAGC 1 cut(s) 56
BspACI CCGC 5 cut(s) 908, 987, 1197, 1249, 1255
BspANI GGCC 1 cut(s) 673
BspCNI CTCAG 4 cut(s) 69, 88, 736, 928
BspHI TCATGA 1 cut(s) 1228
BspLI GGNNCC 7 cut(s) 146, 241, 568, 625, 758, 1186, 1247
BspMAI CTGCAG 2 cut(s) 605, 729
BspOI GCTAGC 1 cut(s) 743
BspPI GGATC 3 cut(s) 642, 1144, 1198
BspT107I GGYRCC 4 cut(s) 144, 239, 756, 1184
BspTI CTTAAG 1 cut(s) 805
BspTNI GGTCTC 1 cut(s) 66
BsrI ACTGG 2 cut(s) 619, 920
BssECI CCNNGG 3 cut(s) 133, 416, 1126
BssMI GATC 3 cut(s) 634, 1149, 1203
BssNI GRCGYC 1 cut(s) 1185
Bst2UI CCWGG 3 cut(s) 134, 418, 720
Bst4CI ACNGT 2 cut(s) 682, 959
Bst6I CTCTTC 3 cut(s) 33, 771, 963
BstACI GRCGYC 1 cut(s) 1185
BstAFI CTTAAG 1 cut(s) 805
BstC8I GCNNGC 2 cut(s) 478, 741
BstDEI CTNAG 5 cut(s) 56, 96, 507, 744, 936
BstF5I GGATG 3 cut(s) 292, 847, 1159
BstH2I RGCGCY 2 cut(s) 1147, 1188
BstHHI GCGC 4 cut(s) 271, 448, 1146, 1187
BstKTI GATC 3 cut(s) 637, 1152, 1206
BstMAI GTCTC 3 cut(s) 66, 544, 906
BstMBI GATC 3 cut(s) 634, 1149, 1203
BstMWI GCNNNNNNNGC 1 cut(s) 277
BstNI CCWGG 3 cut(s) 134, 418, 720
BstSCI CCNGG 4 cut(s) 132, 416, 718, 1269
BstSFI CTRYAG 2 cut(s) 601, 725
BstSLI GKGCMC 3 cut(s) 288, 354, 761
BstV1I GCAGC 1 cut(s) 1238
BstX2I RGATCY 1 cut(s) 1149
BstYI RGATCY 1 cut(s) 1149
Bsu36I CCTNAGG 1 cut(s) 507
BsuRI GGCC 1 cut(s) 673
BtsCI GGATG 3 cut(s) 292, 847, 1159
Cac8I GCNNGC 2 cut(s) 478, 741
CciI TCATGA 1 cut(s) 1228
CfoI GCGC 4 cut(s) 271, 448, 1146, 1187
Cfr13I GGNCC 3 cut(s) 313, 623, 671
CsiI ACCWGGT 1 cut(s) 718
Csp6I GTAC 3 cut(s) 130, 145, 1107
CviAII CATG 4 cut(s) 310, 341, 638, 1229
CviQI GTAC 3 cut(s) 130, 145, 1107
DdeI CTNAG 5 cut(s) 56, 96, 507, 744, 936
DinI GGCGCC 1 cut(s) 1186
DpnI GATC 3 cut(s) 636, 1151, 1205
DpnII GATC 3 cut(s) 634, 1149, 1203
DraI TTTAAA 1 cut(s) 1080
Eam1104I CTCTTC 3 cut(s) 33, 771, 963
EarI CTCTTC 3 cut(s) 33, 771, 963
Ecl136II GAGCTC 1 cut(s) 55
Eco24I GRGCYC 1 cut(s) 57
Eco31I GGTCTC 1 cut(s) 66
Eco32I GATATC 1 cut(s) 211
Eco47I GGWCC 2 cut(s) 313, 623
Eco53kI GAGCTC 1 cut(s) 55
Eco81I CCTNAGG 1 cut(s) 507
Eco88I CYCGRG 2 cut(s) 198, 1127
EcoICRI GAGCTC 1 cut(s) 55
EcoO109I RGGNCCY 1 cut(s) 671
EcoRII CCWGG 3 cut(s) 132, 416, 718
EcoRV GATATC 1 cut(s) 211
EcoT22I ATGCAT 1 cut(s) 159
EcoT38I GRGCYC 1 cut(s) 57
EgeI GGCGCC 1 cut(s) 1186
EheI GGCGCC 1 cut(s) 1186
FaeI CATG 4 cut(s) 313, 344, 641, 1232
FalI AAGNNNNNCTT 2 cut(s) 647, 679
FatI CATG 4 cut(s) 309, 340, 637, 1228
FauI CCCGC 1 cut(s) 901
Fnu4HI GCNGC 3 cut(s) 987, 1252, 1255
FokI GGATG 3 cut(s) 279, 854, 1146
FriOI GRGCYC 1 cut(s) 57
Fsp4HI GCNGC 3 cut(s) 987, 1252, 1255
FspBI CTAG 4 cut(s) 272, 443, 740, 953
GlaI GCGC 4 cut(s) 270, 447, 1145, 1186
GluI GCNGC 3 cut(s) 987, 1252, 1255
GsaI CCCAGC 1 cut(s) 1144
GsuI CTGGAG 3 cut(s) 896, 937, 1199
HaeII RGCGCY 2 cut(s) 1147, 1188
HaeIII GGCC 1 cut(s) 673
HapII CCGG 4 cut(s) 375, 770, 1116, 1270
HhaI GCGC 4 cut(s) 271, 448, 1146, 1187
Hin1I GRCGYC 1 cut(s) 1185
Hin1II CATG 4 cut(s) 313, 344, 641, 1232
Hin6I GCGC 4 cut(s) 269, 446, 1144, 1185
HinP1I GCGC 4 cut(s) 269, 446, 1144, 1185
HinfI GANTC 3 cut(s) 388, 470, 1278
HpaII CCGG 4 cut(s) 375, 770, 1116, 1270
HphI GGTGA 2 cut(s) 759, 1036
Hpy166II GTNNAC 3 cut(s) 286, 796, 847
Hpy188III TCNNGA 4 cut(s) 200, 296, 392, 1229
Hpy8I GTNNAC 3 cut(s) 286, 796, 847
Hpy99I CGWCG 1 cut(s) 1184
HpyAV CCTTC 9 cut(s) 30, 94, 224, 364, 649, 662, 1088, 1235, 1244
HpyCH4III ACNGT 2 cut(s) 682, 959
HpyCH4V TGCA 7 cut(s) 157, 286, 480, 603, 727, 887, 979
HpyF10VI GCNNNNNNNGC 1 cut(s) 277
HpyF3I CTNAG 5 cut(s) 56, 96, 507, 744, 936
Hsp92I GRCGYC 1 cut(s) 1185
Hsp92II CATG 4 cut(s) 313, 344, 641, 1232
HspAI GCGC 4 cut(s) 269, 446, 1144, 1185
KasI GGCGCC 1 cut(s) 1184
KpnI GGTACC 1 cut(s) 148
Kzo9I GATC 3 cut(s) 634, 1149, 1203
LmnI GCTCC 1 cut(s) 1251
Lsp1109I GCAGC 1 cut(s) 1238
LweI GCATC 3 cut(s) 457, 973, 1228
MabI ACCWGGT 1 cut(s) 718
MaeI CTAG 4 cut(s) 272, 443, 740, 953
MaeIII GTNAC 2 cut(s) 3, 610
MalI GATC 3 cut(s) 636, 1151, 1205
MboI GATC 3 cut(s) 634, 1149, 1203
MboII GAAGA 7 cut(s) 15, 20, 593, 785, 788, 980, 988
MflI RGATCY 1 cut(s) 1149
MhlI GDGCHC 4 cut(s) 57, 288, 354, 761
MluCI AATT 9 cut(s) 15, 47, 168, 258, 571, 826, 835, 860, 1072
Mly113I GGCGCC 1 cut(s) 1185
MlyI GAGTC 1 cut(s) 464
MmeI TCCRAC 1 cut(s) 1177
Mph1103I ATGCAT 1 cut(s) 159
MroXI GAANNNNTTC 2 cut(s) 571, 1098
MseI TTAA 3 cut(s) 465, 806, 1079
MspA1I CMGCKG 2 cut(s) 935, 1251
MspCI CTTAAG 1 cut(s) 805
MspI CCGG 4 cut(s) 375, 770, 1116, 1270
MspR9I CCNGG 4 cut(s) 134, 418, 720, 1271
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 3 cut(s) 134, 418, 720
MwoI GCNNNNNNNGC 1 cut(s) 277
NarI GGCGCC 1 cut(s) 1185
NciI CCSGG 1 cut(s) 1271
NdeII GATC 3 cut(s) 634, 1149, 1203
NheI GCTAGC 1 cut(s) 739
NlaIII CATG 4 cut(s) 313, 344, 641, 1232
NlaIV GGNNCC 7 cut(s) 146, 241, 568, 625, 758, 1186, 1247
NmuCI GTSAC 2 cut(s) 3, 610
NsiI ATGCAT 1 cut(s) 159
PaeR7I CTCGAG 1 cut(s) 198
PagI TCATGA 1 cut(s) 1228
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 571, 1098
PfeI GAWTC 2 cut(s) 388, 1278
PkrI GCNGC 3 cut(s) 988, 1253, 1256
PleI GAGTC 1 cut(s) 464
PluTI GGCGCC 1 cut(s) 1188
PpsI GAGTC 1 cut(s) 464
Psp124BI GAGCTC 1 cut(s) 57
Psp6I CCWGG 3 cut(s) 132, 416, 718
PspFI CCCAGC 1 cut(s) 1140
PspGI CCWGG 3 cut(s) 132, 416, 718
PspN4I GGNNCC 7 cut(s) 146, 241, 568, 625, 758, 1186, 1247
PspPI GGNCC 3 cut(s) 313, 623, 671
PstI CTGCAG 2 cut(s) 605, 729
PsuI RGATCY 1 cut(s) 1149
PvuII CAGCTG 1 cut(s) 935
RsaI GTAC 3 cut(s) 131, 146, 1108
RsaNI GTAC 3 cut(s) 130, 145, 1107
SacI GAGCTC 1 cut(s) 57
SaqAI TTAA 3 cut(s) 465, 806, 1079
SatI GCNGC 3 cut(s) 987, 1252, 1255
Sau3AI GATC 3 cut(s) 634, 1149, 1203
Sau96I GGNCC 3 cut(s) 313, 623, 671
SchI GAGTC 1 cut(s) 464
ScrFI CCNGG 4 cut(s) 134, 418, 720, 1271
SduI GDGCHC 4 cut(s) 57, 288, 354, 761
SexAI ACCWGGT 1 cut(s) 718
SfaNI GCATC 3 cut(s) 457, 973, 1228
SfcI CTRYAG 2 cut(s) 601, 725
SfoI GGCGCC 1 cut(s) 1186
Sfr274I CTCGAG 1 cut(s) 198
SinI GGWCC 2 cut(s) 313, 623
SlaI CTCGAG 1 cut(s) 198
SmlI CTYRAG 3 cut(s) 198, 251, 805
SmoI CTYRAG 3 cut(s) 198, 251, 805
Sse9I AATT 9 cut(s) 15, 47, 168, 258, 571, 826, 835, 860, 1072
SsiI CCGC 5 cut(s) 908, 987, 1197, 1249, 1255
SspDI GGCGCC 1 cut(s) 1184
SspMI CTAG 4 cut(s) 272, 443, 740, 953
SstI GAGCTC 1 cut(s) 57
StyD4I CCNGG 4 cut(s) 132, 416, 718, 1269
TaaI ACNGT 2 cut(s) 682, 959
TaqI TCGA 4 cut(s) 199, 866, 1202, 1237
TasI AATT 9 cut(s) 15, 47, 168, 258, 571, 826, 835, 860, 1072
TauI GCSGC 2 cut(s) 989, 1257
TfiI GAWTC 2 cut(s) 388, 1278
Tru1I TTAA 3 cut(s) 465, 806, 1079
Tru9I TTAA 3 cut(s) 465, 806, 1079
TseFI GTSAC 2 cut(s) 3, 610
TseI GCWGC 1 cut(s) 1251
Tsp45I GTSAC 2 cut(s) 3, 610
TspDTI ATGAA 4 cut(s) 679, 722, 982, 1217
Vha464I CTTAAG 1 cut(s) 805
VneI GTGCAC 1 cut(s) 284
VpaK11BI GGWCC 2 cut(s) 313, 623
XapI RAATTY 3 cut(s) 15, 168, 826
XhoI CTCGAG 1 cut(s) 198
XmnI GAANNNNTTC 2 cut(s) 571, 1098
XspI CTAG 4 cut(s) 272, 443, 740, 953
Zsp2I ATGCAT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.