AT3G45070

Belongs to the sulfotransferase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0001120
Physical Location & Seq
Reverse (-)
16486274 .. 16487484
1211 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45070.3

Sequence Viewer

Length: 972 bp
ATGGAGATGAACTTGAGAATTGAAGACCTAAACGAAGAAACAAAGACTCTAATCTCTTCACTTCCTTCAGACAAAGATTTCACTGGGAAAACTATTTGCAAGTATCAAGGATGTTGGTATACTCACAATGTTCTTCAAGCTGTCCTCAATTTCCAGAAAAGCTTCAAGCCTCAAGACACCGATATCATCGTTGCTTCGTTCCCTAAATGCGGCACCACTTGGCTCAAGGCGCTTACATTCGCACTCCTTCATAGATCAAAACAGCCTTCTCATGATGATGATCATCCTCTTCTTTCTAATAATCCACACGTTCTTGTACCCTACTTTGAGATAGATCTCTATCTACGTAGCGAAAATCCTGACCTTACCAAGTTCTCATCATCTCCGAGGCTGTTTTCGACACACGTGCCGTCACATACGTTGCAAGAAGGTCTCAAAGGTTCTACTTGTAAAATTGTGTATATATCTAGAAACGTAAAAGACACATTGGTTTCATATTGGCATTTCTTTACTAAGAAACAAACCGATGAAAAAATAATAAGCAGTTTCGAGGATACGTTTGAGATGTTTTGTAGGGGAGTCAGCATTTTCGGGCCTTTTTGGGATCATGTCTTAAGCTATTGGAGAGGAAGCTTGGAAGATCCAAACCATGTGCTTTTTATGAAGTTTGAAGAGATGAAAGCAGAACCTCGTGACCAGATCAAGAAATTTGCCGAGTTCTTAGGTTGTCCTTTTACTAAGGAAGAAGAAGAGAGCGGATCGGTGGATGAGATTATCGATCTTTGTTCTCTACGTAATCTGAGCAGTTTGGAGATCAATAAGACCGGAAAATTGAATTCTGGTAGAGAAAACAAAATGTTTTTCCGTAAAGGAGAAGTTGGTGATTGGAAGAACTATTTGACTCCTGAAATGGAGAACAAAATCGACATGATCATTCAAGAGAAACTTCAAAACTCTGGTTTGAAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008146 GO:0008150 GO:0008152 GO:0009812 GO:0016740 GO:0016782 GO:0071704 GO:1990135
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1

Protein Analysis

323

Amino Acids

37.5

Weight (kDa)

5.97

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_1 PF00685 64 - 325 3.4e-76 Sulfotransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 212
AccBSI CCGCTC 1 cut(s) 756
AccI GTMKAC 1 cut(s) 119
AciI CCGC 2 cut(s) 210, 756
AclWI GGATC 3 cut(s) 612, 635, 766
AcsI RAATTY 3 cut(s) 707, 835, 965
AcuI CTGAAG 1 cut(s) 51
AcvI CACGTG 1 cut(s) 406
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 1 cut(s) 209
AflII CTTAAG 1 cut(s) 613
AflIII ACRYGT 2 cut(s) 307, 403
AgsI TTSAA 8 cut(s) 23, 137, 166, 671, 835, 938, 950, 964
AluBI AGCT 4 cut(s) 140, 162, 618, 633
AluI AGCT 4 cut(s) 140, 162, 618, 633
Alw26I GTCTC 1 cut(s) 437
AlwI GGATC 3 cut(s) 612, 635, 766
AoxI GGCC 1 cut(s) 593
ApoI RAATTY 3 cut(s) 707, 835, 965
Asp700I GAANNNNTTC 1 cut(s) 161
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 1 cut(s) 593
AsuHPI GGTGA 1 cut(s) 893
BanI GGYRCC 1 cut(s) 212
BauI CACGAG 1 cut(s) 690
BbrPI CACGTG 1 cut(s) 406
BbsI GAAGAC 1 cut(s) 30
BceAI ACGGC 1 cut(s) 394
BcgI CGANNNNNNTGC 2 cut(s) 388, 422
BciVI GTATCC 1 cut(s) 547
BclI TGATCA 2 cut(s) 280, 930
BcoDI GTCTC 1 cut(s) 437
BfaI CTAG 1 cut(s) 468
BfoI RGCGCY 1 cut(s) 233
BfrI CTTAAG 1 cut(s) 613
BfuI GTATCC 1 cut(s) 547
BglII AGATCT 1 cut(s) 334
BisI GCNGC 1 cut(s) 211
BlsI GCNGC 1 cut(s) 212
BmgT120I GGNCC 1 cut(s) 593
BmiI GGNNCC 1 cut(s) 214
BmrI ACTGGG 1 cut(s) 93
BmuI ACTGGG 1 cut(s) 93
BpiI GAAGAC 1 cut(s) 30
BpuEI CTTGAG 3 cut(s) 34, 156, 209
Bsa29I ATCGAT 1 cut(s) 777
BsaAI YACGTR 3 cut(s) 347, 406, 794
BsaBI GATNNNNATC 3 cut(s) 279, 282, 339
BsaI GGTCTC 1 cut(s) 437
BsaJI CCNNGG 1 cut(s) 386
BsaWI WCCGGW 1 cut(s) 824
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse1I ACTGG 1 cut(s) 88
Bse8I GATNNNNATC 3 cut(s) 279, 282, 339
BseCI ATCGAT 1 cut(s) 777
BseDI CCNNGG 1 cut(s) 386
BseGI GGATG 3 cut(s) 116, 283, 772
BseJI GATNNNNATC 3 cut(s) 279, 282, 339
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMII CTCAG 1 cut(s) 791
BseNI ACTGG 1 cut(s) 88
BshFI GGCC 1 cut(s) 595
BshNI GGYRCC 1 cut(s) 212
BshVI ATCGAT 1 cut(s) 777
BsiSI CCGG 1 cut(s) 825
BslI CCNNNNNNNGG 1 cut(s) 209
BsmAI GTCTC 1 cut(s) 437
BsnI GGCC 1 cut(s) 595
Bso31I GGTCTC 1 cut(s) 437
BspACI CCGC 2 cut(s) 210, 756
BspANI GGCC 1 cut(s) 595
BspCNI CTCAG 1 cut(s) 792
BspDI ATCGAT 1 cut(s) 777
BspHI TCATGA 1 cut(s) 271
BspLI GGNNCC 1 cut(s) 214
BspPI GGATC 3 cut(s) 612, 635, 766
BspT107I GGYRCC 1 cut(s) 212
BspTI CTTAAG 1 cut(s) 613
BspTNI GGTCTC 1 cut(s) 437
BsrBI CCGCTC 1 cut(s) 756
BsrI ACTGG 1 cut(s) 88
BssECI CCNNGG 1 cut(s) 386
BssNAI GTATAC 1 cut(s) 120
BssSI CACGAG 1 cut(s) 690
Bst1107I GTATAC 1 cut(s) 120
Bst2BI CACGAG 1 cut(s) 690
Bst6I CTCTTC 4 cut(s) 61, 294, 666, 744
BstAFI CTTAAG 1 cut(s) 613
BstBAI YACGTR 3 cut(s) 347, 406, 794
BstDEI CTNAG 4 cut(s) 513, 721, 738, 800
BstF5I GGATG 3 cut(s) 116, 283, 772
BstH2I RGCGCY 1 cut(s) 233
BstHHI GCGC 1 cut(s) 232
BstMAI GTCTC 1 cut(s) 437
BstMWI GCNNNNNNNGC 1 cut(s) 229
BstSNI TACGTA 2 cut(s) 347, 794
BstV2I GAAGAC 1 cut(s) 30
BstX2I RGATCY 2 cut(s) 334, 640
BstYI RGATCY 2 cut(s) 334, 640
BstZ17I GTATAC 1 cut(s) 120
Bsu15I ATCGAT 1 cut(s) 777
BsuI GTATCC 1 cut(s) 547
BsuRI GGCC 1 cut(s) 595
BsuTUI ATCGAT 1 cut(s) 777
BtsCI GGATG 3 cut(s) 116, 283, 772
BtsIMutI CAGTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 271
CfoI GCGC 1 cut(s) 232
Cfr13I GGNCC 1 cut(s) 593
ClaI ATCGAT 1 cut(s) 777
Csp6I GTAC 1 cut(s) 317
CviAII CATG 4 cut(s) 272, 608, 650, 928
CviJI RGCY 9 cut(s) 140, 162, 169, 223, 265, 391, 595, 618, 633
CviKI_1 RGCY 9 cut(s) 140, 162, 169, 223, 265, 391, 595, 618, 633
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 4 cut(s) 513, 721, 738, 800
Eam1104I CTCTTC 4 cut(s) 61, 294, 666, 744
EarI CTCTTC 4 cut(s) 61, 294, 666, 744
Eco105I TACGTA 2 cut(s) 347, 794
Eco31I GGTCTC 1 cut(s) 437
Eco32I GATATC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 51
Eco72I CACGTG 1 cut(s) 406
EcoRI GAATTC 1 cut(s) 835
EcoRV GATATC 1 cut(s) 184
FaeI CATG 4 cut(s) 275, 611, 653, 931
FalI AAGNNNNNCTT 2 cut(s) 930, 962
FatI CATG 4 cut(s) 271, 607, 649, 927
FbaI TGATCA 2 cut(s) 280, 930
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 1 cut(s) 211
FokI GGATG 3 cut(s) 123, 270, 779
Fsp4HI GCNGC 1 cut(s) 211
FspBI CTAG 1 cut(s) 468
GlaI GCGC 1 cut(s) 231
GluI GCNGC 1 cut(s) 211
HaeII RGCGCY 1 cut(s) 233
HaeIII GGCC 1 cut(s) 595
HapII CCGG 1 cut(s) 825
HhaI GCGC 1 cut(s) 232
Hin1II CATG 4 cut(s) 275, 611, 653, 931
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HindIII AAGCTT 2 cut(s) 160, 631
HinfI GANTC 3 cut(s) 46, 579, 901
HpaII CCGG 1 cut(s) 825
HphI GGTGA 1 cut(s) 893
Hpy166II GTNNAC 1 cut(s) 120
Hpy188I TCNGA 4 cut(s) 70, 387, 801, 971
Hpy188III TCNNGA 9 cut(s) 154, 173, 272, 359, 468, 692, 703, 905, 938
Hpy8I GTNNAC 1 cut(s) 120
HpyAV CCTTC 4 cut(s) 75, 257, 276, 422
HpyCH4IV ACGT 7 cut(s) 309, 346, 405, 419, 474, 557, 793
HpyCH4V TGCA 2 cut(s) 99, 424
HpyF10VI GCNNNNNNNGC 1 cut(s) 229
HpyF3I CTNAG 4 cut(s) 513, 721, 738, 800
HpySE526I ACGT 7 cut(s) 309, 346, 405, 419, 474, 557, 793
Hsp92II CATG 4 cut(s) 275, 611, 653, 931
HspAI GCGC 1 cut(s) 230
Ksp22I TGATCA 2 cut(s) 280, 930
LpnPI CCDG 8 cut(s) 69, 167, 372, 710, 825, 838, 918, 942
MaeI CTAG 1 cut(s) 468
MaeII ACGT 7 cut(s) 309, 346, 405, 419, 474, 557, 793
MaeIII GTNAC 2 cut(s) 411, 692
MbiI CCGCTC 1 cut(s) 756
MflI RGATCY 2 cut(s) 334, 640
MluCI AATT 7 cut(s) 18, 148, 453, 707, 830, 835, 965
MlyI GAGTC 3 cut(s) 40, 588, 895
MnlI CCTC 7 cut(s) 155, 180, 297, 381, 544, 620, 699
MroXI GAANNNNTTC 1 cut(s) 161
MseI TTAA 1 cut(s) 614
MslI CAYNNNNRTG 1 cut(s) 276
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 1 cut(s) 825
MwoI GCNNNNNNNGC 1 cut(s) 229
NlaIII CATG 4 cut(s) 275, 611, 653, 931
NlaIV GGNNCC 1 cut(s) 214
NmeAIII GCCGAG 1 cut(s) 739
NmuCI GTSAC 2 cut(s) 411, 692
PagI TCATGA 1 cut(s) 271
PdmI GAANNNNTTC 1 cut(s) 161
PkrI GCNGC 1 cut(s) 212
PleI GAGTC 3 cut(s) 40, 587, 895
PmaCI CACGTG 1 cut(s) 406
PmlI CACGTG 1 cut(s) 406
PpsI GAGTC 3 cut(s) 40, 587, 895
Ppu21I YACGTR 3 cut(s) 347, 406, 794
PspCI CACGTG 1 cut(s) 406
PspN4I GGNNCC 1 cut(s) 214
PspPI GGNCC 1 cut(s) 593
PsuI RGATCY 2 cut(s) 334, 640
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 1 cut(s) 614
SatI GCNGC 1 cut(s) 211
Sau96I GGNCC 1 cut(s) 593
SchI GAGTC 3 cut(s) 40, 588, 895
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 4 cut(s) 13, 171, 224, 613
SmoI CTYRAG 4 cut(s) 13, 171, 224, 613
SnaBI TACGTA 2 cut(s) 347, 794
Sse9I AATT 7 cut(s) 18, 148, 453, 707, 830, 835, 965
SsiI CCGC 2 cut(s) 210, 756
SspMI CTAG 1 cut(s) 468
TaiI ACGT 7 cut(s) 312, 349, 408, 422, 477, 560, 796
TaqI TCGA 4 cut(s) 398, 549, 777, 924
TasI AATT 7 cut(s) 18, 148, 453, 707, 830, 835, 965
TauI GCSGC 1 cut(s) 213
Tru1I TTAA 1 cut(s) 614
Tru9I TTAA 1 cut(s) 614
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 2 cut(s) 411, 692
Tsp45I GTSAC 2 cut(s) 411, 692
TspDTI ATGAA 6 cut(s) 23, 239, 483, 543, 677, 692
TspGWI ACGGA 1 cut(s) 854
TspRI CASTG 1 cut(s) 88
Vha464I CTTAAG 1 cut(s) 613
XapI RAATTY 3 cut(s) 707, 835, 965
XbaI TCTAGA 1 cut(s) 467
XmiI GTMKAC 1 cut(s) 119
XmnI GAANNNNTTC 1 cut(s) 161
XspI CTAG 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.