Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001120

Physical Location & Seq

Genomic Coordinates Reverse (-)

29099160 .. 29100030

Gene Structure 871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G293200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGGCAACACCTCAACCTCCTCCTGCTCTTCCCCAATACTTGCAAGAACATGAATTCAGCCAAGAAAACAGAGACTTTATATCCTCTCTGCCTACAGAAAAAGGTTGGGTTTCAAACCACCTTCATCAGTACCAAGGTTTTTGGCATGCAACTAGACACATGCAGGGAGTTTTAGCATGCCAGAAACACTTCCAGGCCCTAGACACTGACATCCTTCTTGTTAGCACTCCCAAATCAGGCACTACTTGGCTCAAGGCTATTCTGTTTGCCTTGGTGAAAAGGGCGCAACATCCAGACCCTCAACAACACCTTCTGATCACAAACATCCCTCATGTTCTGGTGCCCTTCTTGGAGCTGAACGTATACATGGAGAAAGAGGTTCCTGACCTCACCGCTTTGACCCCTCCGAGGCTCTTTTCGACTCATTTGCCATATGTGTCTCTGCCTGATTCTGTCAAACACTCTGCATGCAAGGTTGTTTACTTGTGCAGAGATCCTAAGGACACATTTGTTTCTCTTTGGCACTTCGCCAACAAATTGAGAGCCAAAAGTAGGGGCACCATTTCACTTGAAGAAGCGTTTGATAAGTTCTGCAAAGGAGTGAGCTTGGATGGGCCCCTTTGGGATCATGTGTTGGGGTATTGGAAGGAGAGTTTGGAAAGGCCTGAAAAGGTAATGTTCTTCAAGAACGTTGAGGTTGGAGATTGGATGAATTATTTGACAGCTGAAATGGTGGAGAGACTAGATTGCATCAATGAAGAGAAATTGCAAGGTTCTGGGTTGAAATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

264

Amino Acids

30.28

Weight (kDa)

6.49

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28170 AT2G03760 AT2G27570 AT3G45070 AT3G45070 AT3G45070 AT3G45080 AT5G43690
fragaria_vesca	FvH4_4g29330 FvH4_4g29331 FvH4_4g29332 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29751
malus_domestica	MD16G1055600.v1.1 MD16G1055700.v1.1 MD16G1055800.v1.1 MD16G1056100.v1.1
prunus_persica	Prupe.1G293200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0437381 RchiOBHm_Chr4g0437391 RchiOBHm_Chr7g0233341
rosa_laevigata	RLG00000006442 RLG00000013880
rosa_multiflora	Rmu_sc0004759.1_g000009 Rmu_sc0004759.1_g000010 Rmu_sc0010228.1_g000003 Rmu_sc0010228.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227360 Rroxscaffold_5G00378530 Rroxscaffold_5G00378560 Rroxscaffold_5G00378630
rosa_rugosa	Rorug04G0300400 Rorug04G0300500 Rorug04G0300600 Rorug04G0301000
rosa_samantha	Rh4AG355300 Rh4BG365000 Rh4BG365100 Rh4BG365400 Rh4BG365500 Rh4CG379200 Rh4CG379300 Rh4CG379600 Rh4CG379700 Rh4DG359000 Rh4DG359100 Rh4DG359300 Rh5DG503800 Rh7CG455200
rosa_wichuraiana	Rw0G022450 Rw4G031140 Rw4G031170 Rw4G031180 Rw7G035860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	340, 557
AccI	GTMKAC	1 cut(s)	363
AciI	CCGC	1 cut(s)	393
AclI	AACGTT	1 cut(s)	690
AclWI	GGATC	2 cut(s)	488, 633
AcsI	RAATTY	2 cut(s)	53, 785
AfaI	GTAC	1 cut(s)	131
AfiI	CCNNNNNNNGG	3 cut(s)	236, 408, 552
AgsI	TTSAA	4 cut(s)	114, 572, 685, 784
AjnI	CCWGG	1 cut(s)	192
AjuI	GAANNNNNNNTTGG	2 cut(s)	638, 670
AluBI	AGCT	3 cut(s)	355, 606, 725
AluI	AGCT	3 cut(s)	355, 606, 725
Alw26I	GTCTC	3 cut(s)	66, 444, 733
AlwI	GGATC	2 cut(s)	488, 633
AoxI	GGCC	3 cut(s)	195, 614, 662
ApaI	GGGCCC	1 cut(s)	618
ApoI	RAATTY	2 cut(s)	53, 785
Asp700I	GAANNNNTTC	1 cut(s)	188
AspLEI	GCGC	1 cut(s)	286
AspS9I	GGNCC	3 cut(s)	196, 614, 615
AsuHPI	GGTGA	2 cut(s)	286, 382
AxyI	CCTNAGG	1 cut(s)	498
BaeGI	GKGCMC	3 cut(s)	345, 560, 618
BanI	GGYRCC	2 cut(s)	340, 557
BanII	GRGCYC	1 cut(s)	618
BccI	CCATC	1 cut(s)	605
BcgI	CGANNNNNNTGC	2 cut(s)	409, 443
BciT130I	CCWGG	1 cut(s)	194
BclI	TGATCA	1 cut(s)	315
BcoDI	GTCTC	3 cut(s)	66, 444, 733
BfaI	CTAG	3 cut(s)	153, 200, 743
BfmI	CTRYAG	1 cut(s)	93
Bme1390I	CCNGG	1 cut(s)	194
BmgT120I	GGNCC	3 cut(s)	196, 614, 615
BmiI	GGNNCC	5 cut(s)	342, 381, 559, 616, 617
BmrFI	CCNGG	1 cut(s)	194
BmsI	GCATC	1 cut(s)	759
BpuEI	CTTGAG	1 cut(s)	236
BsaJI	CCNNGG	3 cut(s)	133, 270, 407
Bsc4I	CCNNNNNNNGG	3 cut(s)	236, 408, 552
Bse21I	CCTNAGG	1 cut(s)	498
BseBI	CCWGG	1 cut(s)	194
BseDI	CCNNGG	3 cut(s)	133, 270, 407
BseGI	GGATG	5 cut(s)	210, 289, 324, 616, 714
BseLI	CCNNNNNNNGG	3 cut(s)	236, 408, 552
BseRI	GAGGAG	1 cut(s)	9
BseSI	GKGCMC	3 cut(s)	345, 560, 618
BsgI	GTGCAG	1 cut(s)	508
BshFI	GGCC	3 cut(s)	197, 616, 664
BshNI	GGYRCC	2 cut(s)	340, 557
BslI	CCNNNNNNNGG	3 cut(s)	236, 408, 552
BsmAI	GTCTC	3 cut(s)	66, 444, 733
BsnI	GGCC	3 cut(s)	197, 616, 664
Bsp120I	GGGCCC	1 cut(s)	614
Bsp1286I	GDGCHC	3 cut(s)	345, 560, 618
Bsp143I	GATC	3 cut(s)	315, 493, 625
BspACI	CCGC	1 cut(s)	393
BspANI	GGCC	3 cut(s)	197, 616, 664
BspLI	GGNNCC	5 cut(s)	342, 381, 559, 616, 617
BspPI	GGATC	2 cut(s)	488, 633
BspQI	GCTCTTC	1 cut(s)	33
BspT107I	GGYRCC	2 cut(s)	340, 557
BssECI	CCNNGG	3 cut(s)	133, 270, 407
BssMI	GATC	3 cut(s)	315, 493, 625
BssNAI	GTATAC	1 cut(s)	364
BssT1I	CCWWGG	2 cut(s)	133, 270
Bst1107I	GTATAC	1 cut(s)	364
Bst2UI	CCWGG	1 cut(s)	194
Bst6I	CTCTTC	2 cut(s)	33, 753
BstC8I	GCNNGC	3 cut(s)	147, 178, 469
BstDEI	CTNAG	1 cut(s)	498
BstF5I	GGATG	5 cut(s)	210, 289, 324, 616, 714
BstHHI	GCGC	1 cut(s)	286
BstKTI	GATC	3 cut(s)	318, 496, 628
BstMAI	GTCTC	3 cut(s)	66, 444, 733
BstMBI	GATC	3 cut(s)	315, 493, 625
BstNI	CCWGG	1 cut(s)	194
BstNSI	RCATGY	4 cut(s)	149, 163, 180, 471
BstSCI	CCNGG	1 cut(s)	192
BstSFI	CTRYAG	1 cut(s)	93
BstSLI	GKGCMC	3 cut(s)	345, 560, 618
BstX2I	RGATCY	1 cut(s)	493
BstYI	RGATCY	1 cut(s)	493
BstZ17I	GTATAC	1 cut(s)	364
Bsu36I	CCTNAGG	1 cut(s)	498
BsuRI	GGCC	3 cut(s)	197, 616, 664
BtsCI	GGATG	5 cut(s)	210, 289, 324, 616, 714
BtsIMutI	CAGTG	1 cut(s)	204
Cac8I	GCNNGC	3 cut(s)	147, 178, 469
CfoI	GCGC	1 cut(s)	286
Cfr13I	GGNCC	3 cut(s)	196, 614, 615
Csp6I	GTAC	1 cut(s)	130
CviAII	CATG	8 cut(s)	50, 146, 160, 177, 332, 367, 468, 629
CviQI	GTAC	1 cut(s)	130
DdeI	CTNAG	1 cut(s)	498
DpnI	GATC	3 cut(s)	317, 495, 627
DpnII	GATC	3 cut(s)	315, 493, 625
Eam1104I	CTCTTC	2 cut(s)	33, 753
EarI	CTCTTC	2 cut(s)	33, 753
Eco130I	CCWWGG	2 cut(s)	133, 270
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	1 cut(s)	618
Eco81I	CCTNAGG	1 cut(s)	498
EcoO109I	RGGNCCY	2 cut(s)	196, 615
EcoRI	GAATTC	1 cut(s)	53
EcoRII	CCWGG	1 cut(s)	192
EcoT14I	CCWWGG	2 cut(s)	133, 270
EcoT38I	GRGCYC	1 cut(s)	618
ErhI	CCWWGG	2 cut(s)	133, 270
FaeI	CATG	8 cut(s)	53, 149, 163, 180, 335, 370, 471, 632
FatI	CATG	8 cut(s)	49, 145, 159, 176, 331, 366, 467, 628
FauNDI	CATATG	1 cut(s)	433
FbaI	TGATCA	1 cut(s)	315
FblI	GTMKAC	1 cut(s)	363
FokI	GGATG	5 cut(s)	197, 276, 311, 623, 721
FriOI	GRGCYC	1 cut(s)	618
FspBI	CTAG	3 cut(s)	153, 200, 743
GlaI	GCGC	1 cut(s)	285
HaeIII	GGCC	3 cut(s)	197, 616, 664
HhaI	GCGC	1 cut(s)	286
Hin1II	CATG	8 cut(s)	53, 149, 163, 180, 335, 370, 471, 632
Hin6I	GCGC	1 cut(s)	284
HinP1I	GCGC	1 cut(s)	284
HinfI	GANTC	2 cut(s)	421, 449
HphI	GGTGA	2 cut(s)	286, 382
Hpy166II	GTNNAC	2 cut(s)	364, 481
Hpy188I	TCNGA	2 cut(s)	315, 408
Hpy188III	TCNNGA	3 cut(s)	293, 383, 685
Hpy8I	GTNNAC	2 cut(s)	364, 481
HpyAV	CCTTC	5 cut(s)	131, 224, 320, 355, 640
HpyCH4IV	ACGT	2 cut(s)	360, 690
HpyCH4V	TGCA	9 cut(s)	43, 149, 163, 467, 471, 489, 594, 750, 769
HpyF3I	CTNAG	1 cut(s)	498
HpySE526I	ACGT	2 cut(s)	360, 690
Hsp92II	CATG	8 cut(s)	53, 149, 163, 180, 335, 370, 471, 632
HspAI	GCGC	1 cut(s)	284
Ksp22I	TGATCA	1 cut(s)	315
Kzo9I	GATC	3 cut(s)	315, 493, 625
LguI	GCTCTTC	1 cut(s)	33
LmnI	GCTCC	1 cut(s)	352
LweI	GCATC	1 cut(s)	759
MaeI	CTAG	3 cut(s)	153, 200, 743
MaeII	ACGT	2 cut(s)	360, 690
MalI	GATC	3 cut(s)	317, 495, 627
MboI	GATC	3 cut(s)	315, 493, 625
MboII	GAAGA	4 cut(s)	20, 584, 673, 770
MflI	RGATCY	1 cut(s)	493
MhlI	GDGCHC	3 cut(s)	345, 560, 618
MluCI	AATT	5 cut(s)	53, 536, 712, 764, 785
MlyI	GAGTC	1 cut(s)	415
MmeI	TCCRAC	1 cut(s)	679
MroXI	GAANNNNTTC	1 cut(s)	188
MspA1I	CMGCKG	1 cut(s)	725
MspR9I	CCNGG	1 cut(s)	194
MvaI	CCWGG	1 cut(s)	194
NdeI	CATATG	1 cut(s)	433
NdeII	GATC	3 cut(s)	315, 493, 625
NlaIII	CATG	8 cut(s)	53, 149, 163, 180, 335, 370, 471, 632
NlaIV	GGNNCC	5 cut(s)	342, 381, 559, 616, 617
NspI	RCATGY	4 cut(s)	149, 163, 180, 471
PaeI	GCATGC	3 cut(s)	149, 180, 471
PceI	AGGCCT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	33
PdmI	GAANNNNTTC	1 cut(s)	188
PfeI	GAWTC	1 cut(s)	449
PleI	GAGTC	1 cut(s)	415
PpsI	GAGTC	1 cut(s)	415
Psp1406I	AACGTT	1 cut(s)	690
Psp6I	CCWGG	1 cut(s)	192
PspGI	CCWGG	1 cut(s)	192
PspN4I	GGNNCC	5 cut(s)	342, 381, 559, 616, 617
PspOMI	GGGCCC	1 cut(s)	614
PspPI	GGNCC	3 cut(s)	196, 614, 615
PsuI	RGATCY	1 cut(s)	493
PvuII	CAGCTG	1 cut(s)	725
RsaI	GTAC	1 cut(s)	131
RsaNI	GTAC	1 cut(s)	130
SapI	GCTCTTC	1 cut(s)	33
Sau3AI	GATC	3 cut(s)	315, 493, 625
Sau96I	GGNCC	3 cut(s)	196, 614, 615
SchI	GAGTC	1 cut(s)	415
ScrFI	CCNGG	1 cut(s)	194
SduI	GDGCHC	3 cut(s)	345, 560, 618
SfaNI	GCATC	1 cut(s)	759
SfcI	CTRYAG	1 cut(s)	93
SmlI	CTYRAG	1 cut(s)	251
SmoI	CTYRAG	1 cut(s)	251
SphI	GCATGC	3 cut(s)	149, 180, 471
Sse9I	AATT	5 cut(s)	53, 536, 712, 764, 785
SseBI	AGGCCT	1 cut(s)	664
SsiI	CCGC	1 cut(s)	393
SspMI	CTAG	3 cut(s)	153, 200, 743
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	1 cut(s)	192
StyI	CCWWGG	2 cut(s)	133, 270
TaiI	ACGT	2 cut(s)	363, 693
TaqI	TCGA	1 cut(s)	419
TasI	AATT	5 cut(s)	53, 536, 712, 764, 785
TfiI	GAWTC	1 cut(s)	449
TscAI	CASTG	1 cut(s)	211
TspDTI	ATGAA	4 cut(s)	66, 113, 725, 771
TspRI	CASTG	1 cut(s)	211
XapI	RAATTY	2 cut(s)	53, 785
XceI	RCATGY	4 cut(s)	149, 163, 180, 471
XmiI	GTMKAC	1 cut(s)	363
XmnI	GAANNNNTTC	1 cut(s)	188
XspI	CTAG	3 cut(s)	153, 200, 743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.