Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001120

Physical Location & Seq

Genomic Coordinates Reverse (-)

16488578 .. 16489782

Gene Structure 1205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G45080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGGATGAGAAAAAGATTACGATGAACGTGAGAAACGATGAGTTAAGCGAAGAATCAAAAACTCTAATCTCTTCACTTCCTTCAGACAAAAATTCCACTGGGGTAAATGTTTGTAAGTACCAAGGATGTTGGTATACTCCGCCTATTCTCCAAGGTGTCCTCAATTTCCAGAAAAACTTTAAGCCTCAAGACACCGATATCATCGTTGCTTCGTTCCCTAAATGCGGCACCACTTGGCTCAAGGCGCTTACATTCGCACTCGTTCGTAGATCGAAGCACCCTTCTCATGATGATCATCATCCACTTCTTTCTGATAATCCACACGTTCTTTCACCCTCCCTTGAGATGTATCTCTATCTATGTAGCGAAAATCCCGACCTTACCAAGTTCTCATCATCTTCGAGGCTGTTTTCGACACACATGCCGTCACATACATTGCAAGAAGGTCTCAAAGGTTCTACTTGTAAAATTGTGTATATGTCTAGAAACGTAAAAGACACATTGGTTTCATATTGGCATTTCTTTTGTAAGAAACAAACCGATGATAACATAATAAGCAGTGTCGAGGATACATTTGAGATGTTTTGTAGGGGAGTCAACTTTTTCGGGCCTTTTTGGGACCATGTCCTAAGCTACTGGAGAGGAAGCTTGGAAGATCCAAACCATGTGCTTTTTATGAAGTTTGAGGAGATGAAAGAAGAACCTCGTGAGCAGATCAAGAGACTAGCCGAATTCTTAGGATGTCTTTTTACTAAGGAAGAAGAAGAAAGCGGCTTGGTGGATGAGATTATCGATCTTTGCTCTCTACGTAATCTGAGCAGTTTGGAGATCAATAAGACCGGAAAATTGCATAGTACTGGTAGAGAGAACAAAACATTTTTCCGTAAGGGAGAAGTTGGTGACTGGAAGAACTATTTGACTCCTGAAATGGAGAACAAAATCGACATGATCATTCAAGAGAAACTTCAAAACTCTGGTTTGAAATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008146 GO:0008150 GO:0008152 GO:0009812 GO:0016740 GO:0016782 GO:0071704 GO:1990135

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

329

Amino Acids

38.07

Weight (kDa)

6.03

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfotransfer_1	PF00685	64 - 326	1.9e-74	Sulfotransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28170 AT2G03760 AT2G27570 AT3G45070 AT3G45070 AT3G45070 AT3G45080 AT5G43690
fragaria_vesca	FvH4_4g29330 FvH4_4g29331 FvH4_4g29332 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29333 FvH4_4g29751
malus_domestica	MD16G1055600.v1.1 MD16G1055700.v1.1 MD16G1055800.v1.1 MD16G1056100.v1.1
prunus_persica	Prupe.1G293200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0437381 RchiOBHm_Chr4g0437391 RchiOBHm_Chr7g0233341
rosa_laevigata	RLG00000006442 RLG00000013880
rosa_multiflora	Rmu_sc0004759.1_g000009 Rmu_sc0004759.1_g000010 Rmu_sc0010228.1_g000003 Rmu_sc0010228.1_g000005
rosa_roxburghii	Rroxscaffold_3G00227360 Rroxscaffold_5G00378530 Rroxscaffold_5G00378560 Rroxscaffold_5G00378630
rosa_rugosa	Rorug04G0300400 Rorug04G0300500 Rorug04G0300600 Rorug04G0301000
rosa_samantha	Rh4AG355300 Rh4BG365000 Rh4BG365100 Rh4BG365400 Rh4BG365500 Rh4CG379200 Rh4CG379300 Rh4CG379600 Rh4CG379700 Rh4DG359000 Rh4DG359100 Rh4DG359300 Rh5DG503800 Rh7CG455200
rosa_wichuraiana	Rw0G022450 Rw4G031140 Rw4G031170 Rw4G031180 Rw7G035860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	227
AccI	GTMKAC	1 cut(s)	134
AciI	CCGC	3 cut(s)	140, 225, 771
AclWI	GGATC	1 cut(s)	650
AcsI	RAATTY	3 cut(s)	91, 731, 983
AcuI	CTGAAG	1 cut(s)	66
AfaI	GTAC	2 cut(s)	119, 856
AfiI	CCNNNNNNNGG	1 cut(s)	224
AflIII	ACRYGT	1 cut(s)	322
AgsI	TTSAA	3 cut(s)	956, 968, 982
AluBI	AGCT	2 cut(s)	633, 648
AluI	AGCT	2 cut(s)	633, 648
Alw26I	GTCTC	2 cut(s)	452, 715
AlwI	GGATC	1 cut(s)	650
AoxI	GGCC	1 cut(s)	608
ApoI	RAATTY	3 cut(s)	91, 731, 983
AspLEI	GCGC	1 cut(s)	247
AspS9I	GGNCC	2 cut(s)	608, 619
AsuHPI	GGTGA	2 cut(s)	324, 911
AvaII	GGWCC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	227
BauI	CACGAG	1 cut(s)	705
BceAI	ACGGC	1 cut(s)	409
BcgI	CGANNNNNNTGC	2 cut(s)	403, 437
BciVI	GTATCC	1 cut(s)	562
BclI	TGATCA	2 cut(s)	292, 948
BcoDI	GTCTC	2 cut(s)	452, 715
BfaI	CTAG	2 cut(s)	483, 725
BfoI	RGCGCY	1 cut(s)	248
BfuI	GTATCC	1 cut(s)	562
BisI	GCNGC	2 cut(s)	226, 772
BlsI	GCNGC	2 cut(s)	227, 773
BmcAI	AGTACT	1 cut(s)	856
Bme18I	GGWCC	1 cut(s)	619
BmgT120I	GGNCC	2 cut(s)	608, 619
BmiI	GGNNCC	2 cut(s)	229, 620
BmrI	ACTGGG	1 cut(s)	108
BmuI	ACTGGG	1 cut(s)	108
BpmI	CTGGAG	1 cut(s)	658
Bpu10I	CCTNAGC	1 cut(s)	629
BpuEI	CTTGAG	3 cut(s)	171, 224, 362
Bsa29I	ATCGAT	1 cut(s)	792
BsaAI	YACGTR	1 cut(s)	809
BsaBI	GATNNNNATC	2 cut(s)	294, 297
BsaI	GGTCTC	1 cut(s)	452
BsaJI	CCNNGG	2 cut(s)	121, 151
BsaWI	WCCGGW	1 cut(s)	839
Bsc4I	CCNNNNNNNGG	1 cut(s)	224
Bse1I	ACTGG	4 cut(s)	103, 641, 862, 908
Bse3DI	GCAATG	1 cut(s)	434
Bse8I	GATNNNNATC	2 cut(s)	294, 297
BseCI	ATCGAT	1 cut(s)	792
BseDI	CCNNGG	2 cut(s)	121, 151
BseGI	GGATG	5 cut(s)	10, 131, 298, 746, 787
BseJI	GATNNNNATC	2 cut(s)	294, 297
BseLI	CCNNNNNNNGG	1 cut(s)	224
BseMI	GCAATG	1 cut(s)	434
BseMII	CTCAG	1 cut(s)	806
BseNI	ACTGG	4 cut(s)	103, 641, 862, 908
BseRI	GAGGAG	1 cut(s)	701
BshFI	GGCC	1 cut(s)	610
BshNI	GGYRCC	1 cut(s)	227
BshVI	ATCGAT	1 cut(s)	792
BsiSI	CCGG	1 cut(s)	840
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	1 cut(s)	224
BsmAI	GTCTC	2 cut(s)	452, 715
BsmFI	GGGAC	1 cut(s)	632
BsnI	GGCC	1 cut(s)	610
Bso31I	GGTCTC	1 cut(s)	452
Bsp143I	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
BspACI	CCGC	3 cut(s)	140, 225, 771
BspANI	GGCC	1 cut(s)	610
BspCNI	CTCAG	1 cut(s)	807
BspDI	ATCGAT	1 cut(s)	792
BspHI	TCATGA	1 cut(s)	286
BspLI	GGNNCC	2 cut(s)	229, 620
BspPI	GGATC	1 cut(s)	650
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	1 cut(s)	452
BsrDI	GCAATG	1 cut(s)	434
BsrI	ACTGG	4 cut(s)	103, 641, 862, 908
BssECI	CCNNGG	2 cut(s)	121, 151
BssMI	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
BssNAI	GTATAC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	705
BssT1I	CCWWGG	2 cut(s)	121, 151
Bst1107I	GTATAC	1 cut(s)	135
Bst2BI	CACGAG	1 cut(s)	705
Bst6I	CTCTTC	1 cut(s)	76
BstBAI	YACGTR	1 cut(s)	809
BstDEI	CTNAG	4 cut(s)	629, 736, 753, 815
BstF5I	GGATG	5 cut(s)	10, 131, 298, 746, 787
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	1 cut(s)	247
BstKTI	GATC	7 cut(s)	272, 295, 658, 717, 796, 831, 951
BstMAI	GTCTC	2 cut(s)	452, 715
BstMBI	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
BstMWI	GCNNNNNNNGC	1 cut(s)	244
BstNSI	RCATGY	1 cut(s)	424
BstSNI	TACGTA	1 cut(s)	809
BstX2I	RGATCY	1 cut(s)	655
BstYI	RGATCY	1 cut(s)	655
BstZ17I	GTATAC	1 cut(s)	135
Bsu15I	ATCGAT	1 cut(s)	792
BsuI	GTATCC	1 cut(s)	562
BsuRI	GGCC	1 cut(s)	610
BsuTUI	ATCGAT	1 cut(s)	792
BtsCI	GGATG	5 cut(s)	10, 131, 298, 746, 787
BtsI	GCAGTG	1 cut(s)	565
BtsIMutI	CAGTG	2 cut(s)	96, 565
CciI	TCATGA	1 cut(s)	286
CfoI	GCGC	1 cut(s)	247
Cfr13I	GGNCC	2 cut(s)	608, 619
ClaI	ATCGAT	1 cut(s)	792
Csp6I	GTAC	2 cut(s)	118, 855
CviAII	CATG	5 cut(s)	287, 421, 623, 665, 946
CviJI	RGCY	8 cut(s)	184, 238, 406, 610, 633, 648, 728, 774
CviKI_1	RGCY	8 cut(s)	184, 238, 406, 610, 633, 648, 728, 774
CviQI	GTAC	2 cut(s)	118, 855
DdeI	CTNAG	4 cut(s)	629, 736, 753, 815
DpnI	GATC	7 cut(s)	271, 294, 657, 716, 795, 830, 950
DpnII	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
Eam1104I	CTCTTC	1 cut(s)	76
EarI	CTCTTC	1 cut(s)	76
EciI	GGCGGA	1 cut(s)	129
Eco105I	TACGTA	1 cut(s)	809
Eco130I	CCWWGG	2 cut(s)	121, 151
Eco31I	GGTCTC	1 cut(s)	452
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	1 cut(s)	619
Eco57I	CTGAAG	1 cut(s)	66
EcoRI	GAATTC	1 cut(s)	731
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	2 cut(s)	121, 151
ErhI	CCWWGG	2 cut(s)	121, 151
FaeI	CATG	5 cut(s)	290, 424, 626, 668, 949
FalI	AAGNNNNNCTT	2 cut(s)	948, 980
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	5 cut(s)	286, 420, 622, 664, 945
FbaI	TGATCA	2 cut(s)	292, 948
FblI	GTMKAC	1 cut(s)	134
Fnu4HI	GCNGC	2 cut(s)	226, 772
FokI	GGATG	5 cut(s)	17, 138, 285, 753, 794
Fsp4HI	GCNGC	2 cut(s)	226, 772
FspBI	CTAG	2 cut(s)	483, 725
GlaI	GCGC	1 cut(s)	246
GluI	GCNGC	2 cut(s)	226, 772
GsuI	CTGGAG	1 cut(s)	658
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	1 cut(s)	610
HapII	CCGG	1 cut(s)	840
HhaI	GCGC	1 cut(s)	247
Hin1II	CATG	5 cut(s)	290, 424, 626, 668, 949
Hin6I	GCGC	1 cut(s)	245
HinP1I	GCGC	1 cut(s)	245
HincII	GTYRAC	1 cut(s)	598
HindII	GTYRAC	1 cut(s)	598
HindIII	AAGCTT	1 cut(s)	646
HinfI	GANTC	3 cut(s)	53, 594, 919
HpaII	CCGG	1 cut(s)	840
HphI	GGTGA	2 cut(s)	324, 911
Hpy166II	GTNNAC	2 cut(s)	135, 598
Hpy188I	TCNGA	4 cut(s)	85, 313, 816, 989
Hpy188III	TCNNGA	9 cut(s)	169, 188, 287, 374, 483, 707, 718, 923, 956
Hpy8I	GTNNAC	2 cut(s)	135, 598
HpyAV	CCTTC	3 cut(s)	90, 291, 437
HpyCH4IV	ACGT	4 cut(s)	27, 324, 489, 808
HpyCH4V	TGCA	2 cut(s)	439, 850
HpyF10VI	GCNNNNNNNGC	1 cut(s)	244
HpyF3I	CTNAG	4 cut(s)	629, 736, 753, 815
HpySE526I	ACGT	4 cut(s)	27, 324, 489, 808
Hsp92II	CATG	5 cut(s)	290, 424, 626, 668, 949
HspAI	GCGC	1 cut(s)	245
Ksp22I	TGATCA	2 cut(s)	292, 948
Kzo9I	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
LpnPI	CCDG	8 cut(s)	84, 182, 622, 843, 853, 889, 936, 960
MaeI	CTAG	2 cut(s)	483, 725
MaeII	ACGT	4 cut(s)	27, 324, 489, 808
MaeIII	GTNAC	2 cut(s)	426, 899
MalI	GATC	7 cut(s)	271, 294, 657, 716, 795, 830, 950
MboI	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
MboII	GAAGA	9 cut(s)	62, 63, 390, 665, 710, 770, 773, 776, 919
MflI	RGATCY	1 cut(s)	655
MluCI	AATT	6 cut(s)	91, 163, 468, 731, 845, 983
MlyI	GAGTC	2 cut(s)	603, 913
MnlI	CCTC	8 cut(s)	170, 195, 346, 396, 559, 635, 679, 714
MseI	TTAA	2 cut(s)	44, 180
MspI	CCGG	1 cut(s)	840
MwoI	GCNNNNNNNGC	1 cut(s)	244
NdeII	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
NlaIII	CATG	5 cut(s)	290, 424, 626, 668, 949
NlaIV	GGNNCC	2 cut(s)	229, 620
NmuCI	GTSAC	2 cut(s)	426, 899
NspI	RCATGY	1 cut(s)	424
PagI	TCATGA	1 cut(s)	286
PcsI	WCGNNNNNNNCGW	1 cut(s)	33
PfeI	GAWTC	1 cut(s)	53
PflFI	GACNNNGTC	1 cut(s)	623
PkrI	GCNGC	2 cut(s)	227, 773
PleI	GAGTC	2 cut(s)	602, 913
PpsI	GAGTC	2 cut(s)	602, 913
Ppu21I	YACGTR	1 cut(s)	809
PspN4I	GGNNCC	2 cut(s)	229, 620
PspPI	GGNCC	2 cut(s)	608, 619
PsuI	RGATCY	1 cut(s)	655
PsyI	GACNNNGTC	1 cut(s)	623
RsaI	GTAC	2 cut(s)	119, 856
RsaNI	GTAC	2 cut(s)	118, 855
SaqAI	TTAA	2 cut(s)	44, 180
SatI	GCNGC	2 cut(s)	226, 772
Sau3AI	GATC	7 cut(s)	269, 292, 655, 714, 793, 828, 948
Sau96I	GGNCC	2 cut(s)	608, 619
ScaI	AGTACT	1 cut(s)	856
SchI	GAGTC	2 cut(s)	603, 913
SinI	GGWCC	1 cut(s)	619
SmlI	CTYRAG	3 cut(s)	186, 239, 341
SmoI	CTYRAG	3 cut(s)	186, 239, 341
SnaBI	TACGTA	1 cut(s)	809
Sse9I	AATT	6 cut(s)	91, 163, 468, 731, 845, 983
SsiI	CCGC	3 cut(s)	140, 225, 771
SspMI	CTAG	2 cut(s)	483, 725
StyI	CCWWGG	2 cut(s)	121, 151
TaiI	ACGT	4 cut(s)	30, 327, 492, 811
TaqI	TCGA	6 cut(s)	272, 401, 413, 564, 792, 942
TasI	AATT	6 cut(s)	91, 163, 468, 731, 845, 983
TatI	WGTACW	1 cut(s)	854
TauI	GCSGC	2 cut(s)	228, 774
TfiI	GAWTC	1 cut(s)	53
Tru1I	TTAA	2 cut(s)	44, 180
Tru9I	TTAA	2 cut(s)	44, 180
TscAI	CASTG	2 cut(s)	103, 565
TseFI	GTSAC	2 cut(s)	426, 899
Tsp45I	GTSAC	2 cut(s)	426, 899
TspDTI	ATGAA	4 cut(s)	38, 498, 692, 707
TspGWI	ACGGA	1 cut(s)	872
TspRI	CASTG	2 cut(s)	103, 565
Tth111I	GACNNNGTC	1 cut(s)	623
VpaK11BI	GGWCC	1 cut(s)	619
XapI	RAATTY	3 cut(s)	91, 731, 983
XbaI	TCTAGA	1 cut(s)	482
XceI	RCATGY	1 cut(s)	424
XmiI	GTMKAC	1 cut(s)	134
XspI	CTAG	2 cut(s)	483, 725
ZrmI	AGTACT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.