RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 245 |
| AccB1I | GGYRCC | 1 cut(s) | 245 |
| AccI | GTMKAC | 1 cut(s) | 150 |
| AccII | CGCG | 2 cut(s) | 144, 179 |
| AciI | CCGC | 4 cut(s) | 42, 144, 177, 1090 |
| AcoI | YGGCCR | 1 cut(s) | 19 |
| AcsI | RAATTY | 1 cut(s) | 782 |
| AcuI | CTGAAG | 1 cut(s) | 611 |
| AcvI | CACGTG | 1 cut(s) | 1007 |
| AcyI | GRCGYC | 1 cut(s) | 942 |
| AdeI | CACNNNGTG | 1 cut(s) | 797 |
| AfaI | GTAC | 4 cut(s) | 247, 523, 1175, 1183 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 23, 249 |
| AgsI | TTSAA | 4 cut(s) | 112, 212, 583, 737 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 483 |
| AjiI | CACGTC | 1 cut(s) | 218 |
| AjnI | CCWGG | 2 cut(s) | 16, 481 |
| Alw21I | GWGCWC | 1 cut(s) | 1071 |
| Alw26I | GTCTC | 5 cut(s) | 71, 907, 912, 933, 1155 |
| AoxI | GGCC | 2 cut(s) | 19, 315 |
| ApoI | RAATTY | 1 cut(s) | 782 |
| Asp718I | GGTACC | 1 cut(s) | 245 |
| AspS9I | GGNCC | 1 cut(s) | 586 |
| AsuC2I | CCSGG | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 1 cut(s) | 980 |
| AvaII | GGWCC | 1 cut(s) | 586 |
| BaeGI | GKGCMC | 1 cut(s) | 1006 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1165, 1198 |
| BanI | GGYRCC | 1 cut(s) | 245 |
| BanII | GRGCYC | 2 cut(s) | 99, 1071 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 505, 537 |
| BauI | CACGAG | 2 cut(s) | 103, 659 |
| BbrPI | CACGTG | 1 cut(s) | 1007 |
| BbsI | GAAGAC | 5 cut(s) | 64, 260, 368, 441, 509 |
| Bbv12I | GWGCWC | 1 cut(s) | 1071 |
| BccI | CCATC | 4 cut(s) | 80, 107, 953, 1086 |
| BceAI | ACGGC | 1 cut(s) | 6 |
| BciT130I | CCWGG | 2 cut(s) | 18, 483 |
| BcnI | CCSGG | 1 cut(s) | 250 |
| BcoDI | GTCTC | 5 cut(s) | 71, 907, 912, 933, 1155 |
| BfaI | CTAG | 1 cut(s) | 303 |
| BfmI | CTRYAG | 1 cut(s) | 1177 |
| BglII | AGATCT | 2 cut(s) | 591, 622 |
| BlpI | GCTNAGC | 1 cut(s) | 569 |
| BmcAI | AGTACT | 1 cut(s) | 1175 |
| Bme1390I | CCNGG | 3 cut(s) | 18, 250, 483 |
| Bme18I | GGWCC | 1 cut(s) | 586 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 483 |
| BmgBI | CACGTC | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 1 cut(s) | 586 |
| BmiI | GGNNCC | 1 cut(s) | 247 |
| BmrFI | CCNGG | 3 cut(s) | 18, 250, 483 |
| BmsI | GCATC | 2 cut(s) | 420, 1188 |
| BpiI | GAAGAC | 5 cut(s) | 64, 260, 368, 441, 509 |
| BpmI | CTGGAG | 1 cut(s) | 470 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 569 |
| BpuEI | CTTGAG | 2 cut(s) | 216, 810 |
| BpuMI | CCSGG | 1 cut(s) | 250 |
| BsaAI | YACGTR | 1 cut(s) | 1007 |
| BsaHI | GRCGYC | 1 cut(s) | 942 |
| BsaJI | CCNNGG | 1 cut(s) | 22 |
| BsaWI | WCCGGW | 1 cut(s) | 242 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 23, 249 |
| Bse1I | ACTGG | 1 cut(s) | 698 |
| BseBI | CCWGG | 2 cut(s) | 18, 483 |
| BseDI | CCNNGG | 1 cut(s) | 22 |
| BseGI | GGATG | 3 cut(s) | 61, 677, 1074 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 23, 249 |
| BseMII | CTCAG | 4 cut(s) | 251, 560, 941, 1171 |
| BseNI | ACTGG | 1 cut(s) | 698 |
| BseRI | GAGGAG | 1 cut(s) | 523 |
| BseSI | GKGCMC | 1 cut(s) | 1006 |
| Bsh1236I | CGCG | 2 cut(s) | 144, 179 |
| BshFI | GGCC | 2 cut(s) | 21, 317 |
| BshNI | GGYRCC | 1 cut(s) | 245 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1071 |
| BsiSI | CCGG | 2 cut(s) | 243, 249 |
| BslFI | GGGAC | 1 cut(s) | 490 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 23, 249 |
| BsmAI | GTCTC | 5 cut(s) | 71, 907, 912, 933, 1155 |
| BsmBI | CGTCTC | 1 cut(s) | 933 |
| BsmFI | GGGAC | 1 cut(s) | 490 |
| BsnI | GGCC | 2 cut(s) | 21, 317 |
| Bsp1286I | GDGCHC | 3 cut(s) | 99, 1006, 1071 |
| Bsp143I | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 569 |
| BspACI | CCGC | 4 cut(s) | 42, 144, 177, 1090 |
| BspANI | GGCC | 2 cut(s) | 21, 317 |
| BspCNI | CTCAG | 4 cut(s) | 250, 561, 940, 1170 |
| BspFNI | CGCG | 2 cut(s) | 144, 179 |
| BspHI | TCATGA | 1 cut(s) | 948 |
| BspLI | GGNNCC | 1 cut(s) | 247 |
| BspT107I | GGYRCC | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 698 |
| BssECI | CCNNGG | 1 cut(s) | 22 |
| BssMI | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| BssNI | GRCGYC | 1 cut(s) | 942 |
| BssSI | CACGAG | 2 cut(s) | 103, 659 |
| Bst2BI | CACGAG | 2 cut(s) | 103, 659 |
| Bst2UI | CCWGG | 2 cut(s) | 18, 483 |
| Bst4CI | ACNGT | 3 cut(s) | 901, 1064, 1181 |
| Bst6I | CTCTTC | 3 cut(s) | 31, 657, 768 |
| BstACI | GRCGYC | 1 cut(s) | 942 |
| BstBAI | YACGTR | 1 cut(s) | 1007 |
| BstC8I | GCNNGC | 2 cut(s) | 345, 409 |
| BstDEI | CTNAG | 5 cut(s) | 237, 569, 869, 927, 1157 |
| BstDSI | CCRYGG | 1 cut(s) | 22 |
| BstF5I | GGATG | 3 cut(s) | 61, 677, 1074 |
| BstFNI | CGCG | 2 cut(s) | 144, 179 |
| BstKTI | GATC | 5 cut(s) | 594, 625, 802, 1051, 1219 |
| BstMAI | GTCTC | 5 cut(s) | 71, 907, 912, 933, 1155 |
| BstMBI | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| BstNI | CCWGG | 2 cut(s) | 18, 483 |
| BstNSI | RCATGY | 3 cut(s) | 389, 407, 925 |
| BstSCI | CCNGG | 3 cut(s) | 16, 248, 481 |
| BstSFI | CTRYAG | 1 cut(s) | 1177 |
| BstSLI | GKGCMC | 1 cut(s) | 1006 |
| BstUI | CGCG | 2 cut(s) | 144, 179 |
| BstV2I | GAAGAC | 5 cut(s) | 64, 260, 368, 441, 509 |
| BstX2I | RGATCY | 2 cut(s) | 591, 622 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1085 |
| BstYI | RGATCY | 2 cut(s) | 591, 622 |
| BsuRI | GGCC | 2 cut(s) | 21, 317 |
| BtgI | CCRYGG | 1 cut(s) | 22 |
| BtrI | CACGTC | 1 cut(s) | 218 |
| BtsCI | GGATG | 3 cut(s) | 61, 677, 1074 |
| BtsIMutI | CAGTG | 2 cut(s) | 705, 897 |
| Cac8I | GCNNGC | 2 cut(s) | 345, 409 |
| CciI | TCATGA | 1 cut(s) | 948 |
| Cfr13I | GGNCC | 1 cut(s) | 586 |
| CseI | GACGC | 1 cut(s) | 950 |
| CsiI | ACCWGGT | 1 cut(s) | 481 |
| Csp6I | GTAC | 4 cut(s) | 246, 522, 1174, 1182 |
| CviAII | CATG | 8 cut(s) | 386, 404, 455, 464, 499, 914, 922, 949 |
| CviQI | GTAC | 4 cut(s) | 246, 522, 1174, 1182 |
| DdeI | CTNAG | 5 cut(s) | 237, 569, 869, 927, 1157 |
| DpnI | GATC | 5 cut(s) | 593, 624, 801, 1050, 1218 |
| DpnII | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| DraIII | CACNNNGTG | 1 cut(s) | 797 |
| DriI | GACNNNNNGTC | 1 cut(s) | 483 |
| EaeI | YGGCCR | 1 cut(s) | 19 |
| Eam1104I | CTCTTC | 3 cut(s) | 31, 657, 768 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 483 |
| EarI | CTCTTC | 3 cut(s) | 31, 657, 768 |
| Ecl136II | GAGCTC | 1 cut(s) | 1069 |
| Eco147I | AGGCCT | 1 cut(s) | 317 |
| Eco24I | GRGCYC | 2 cut(s) | 99, 1071 |
| Eco32I | GATATC | 1 cut(s) | 611 |
| Eco47I | GGWCC | 1 cut(s) | 586 |
| Eco53kI | GAGCTC | 1 cut(s) | 1069 |
| Eco57I | CTGAAG | 1 cut(s) | 611 |
| Eco72I | CACGTG | 1 cut(s) | 1007 |
| EcoICRI | GAGCTC | 1 cut(s) | 1069 |
| EcoRII | CCWGG | 2 cut(s) | 16, 481 |
| EcoRV | GATATC | 1 cut(s) | 611 |
| EcoT22I | ATGCAT | 1 cut(s) | 915 |
| EcoT38I | GRGCYC | 2 cut(s) | 99, 1071 |
| Esp3I | CGTCTC | 1 cut(s) | 933 |
| FaeI | CATG | 8 cut(s) | 389, 407, 458, 467, 502, 917, 925, 952 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 56, 88, 123, 155, 1017, 1049 |
| FaqI | GGGAC | 1 cut(s) | 490 |
| FatI | CATG | 8 cut(s) | 385, 403, 454, 463, 498, 913, 921, 948 |
| FblI | GTMKAC | 1 cut(s) | 150 |
| FokI | GGATG | 3 cut(s) | 68, 664, 1061 |
| FriOI | GRGCYC | 2 cut(s) | 99, 1071 |
| FspBI | CTAG | 1 cut(s) | 303 |
| GsuI | CTGGAG | 1 cut(s) | 470 |
| HaeIII | GGCC | 2 cut(s) | 21, 317 |
| HapII | CCGG | 2 cut(s) | 243, 249 |
| HgaI | GACGC | 1 cut(s) | 950 |
| Hin1I | GRCGYC | 1 cut(s) | 942 |
| Hin1II | CATG | 8 cut(s) | 389, 407, 458, 467, 502, 917, 925, 952 |
| HincII | GTYRAC | 1 cut(s) | 729 |
| HindII | GTYRAC | 1 cut(s) | 729 |
| HpaII | CCGG | 2 cut(s) | 243, 249 |
| HphI | GGTGA | 1 cut(s) | 980 |
| Hpy166II | GTNNAC | 3 cut(s) | 151, 604, 729 |
| Hpy188I | TCNGA | 4 cut(s) | 543, 559, 930, 1160 |
| Hpy8I | GTNNAC | 3 cut(s) | 151, 604, 729 |
| Hpy99I | CGWCG | 1 cut(s) | 1145 |
| HpyAV | CCTTC | 4 cut(s) | 183, 731, 763, 925 |
| HpyCH4III | ACNGT | 3 cut(s) | 901, 1064, 1181 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 1006 |
| HpyCH4V | TGCA | 6 cut(s) | 411, 647, 843, 913, 1021, 1121 |
| HpyF3I | CTNAG | 5 cut(s) | 237, 569, 869, 927, 1157 |
| HpySE526I | ACGT | 2 cut(s) | 217, 1006 |
| Hsp92I | GRCGYC | 1 cut(s) | 942 |
| Hsp92II | CATG | 8 cut(s) | 389, 407, 458, 467, 502, 917, 925, 952 |
| KpnI | GGTACC | 1 cut(s) | 249 |
| Kzo9I | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| LmnI | GCTCC | 2 cut(s) | 47, 451 |
| LweI | GCATC | 2 cut(s) | 420, 1188 |
| MabI | ACCWGGT | 1 cut(s) | 481 |
| MaeI | CTAG | 1 cut(s) | 303 |
| MaeII | ACGT | 2 cut(s) | 217, 1006 |
| MaeIII | GTNAC | 2 cut(s) | 494, 887 |
| MalI | GATC | 5 cut(s) | 593, 624, 801, 1050, 1218 |
| MboI | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| MflI | RGATCY | 2 cut(s) | 591, 622 |
| MhlI | GDGCHC | 3 cut(s) | 99, 1006, 1071 |
| MluCI | AATT | 4 cut(s) | 90, 749, 782, 1042 |
| MlyI | GAGTC | 1 cut(s) | 724 |
| MmeI | TCCRAC | 1 cut(s) | 409 |
| MnlI | CCTC | 8 cut(s) | 20, 32, 183, 301, 501, 569, 666, 936 |
| Mph1103I | ATGCAT | 1 cut(s) | 915 |
| MseI | TTAA | 3 cut(s) | 126, 534, 1134 |
| MspI | CCGG | 2 cut(s) | 243, 249 |
| MspR9I | CCNGG | 3 cut(s) | 18, 250, 483 |
| MvaI | CCWGG | 2 cut(s) | 18, 483 |
| MvnI | CGCG | 2 cut(s) | 144, 179 |
| NciI | CCSGG | 1 cut(s) | 250 |
| NdeII | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| NlaIII | CATG | 8 cut(s) | 389, 407, 458, 467, 502, 917, 925, 952 |
| NlaIV | GGNNCC | 1 cut(s) | 247 |
| NmuCI | GTSAC | 2 cut(s) | 494, 887 |
| NsiI | ATGCAT | 1 cut(s) | 915 |
| NspI | RCATGY | 3 cut(s) | 389, 407, 925 |
| PagI | TCATGA | 1 cut(s) | 948 |
| PceI | AGGCCT | 1 cut(s) | 317 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 81, 1105 |
| PfeI | GAWTC | 9 cut(s) | 13, 162, 181, 205, 544, 554, 741, 1101, 1153 |
| PleI | GAGTC | 1 cut(s) | 724 |
| PmaCI | CACGTG | 1 cut(s) | 1007 |
| PmlI | CACGTG | 1 cut(s) | 1007 |
| PpsI | GAGTC | 1 cut(s) | 724 |
| Ppu21I | YACGTR | 1 cut(s) | 1007 |
| Psp124BI | GAGCTC | 1 cut(s) | 1071 |
| Psp6I | CCWGG | 2 cut(s) | 16, 481 |
| PspCI | CACGTG | 1 cut(s) | 1007 |
| PspGI | CCWGG | 2 cut(s) | 16, 481 |
| PspN4I | GGNNCC | 1 cut(s) | 247 |
| PspPI | GGNCC | 1 cut(s) | 586 |
| PsuI | RGATCY | 2 cut(s) | 591, 622 |
| RsaI | GTAC | 4 cut(s) | 247, 523, 1175, 1183 |
| RsaNI | GTAC | 4 cut(s) | 246, 522, 1174, 1182 |
| SacI | GAGCTC | 1 cut(s) | 1071 |
| SaqAI | TTAA | 3 cut(s) | 126, 534, 1134 |
| Sau3AI | GATC | 5 cut(s) | 591, 622, 799, 1048, 1216 |
| Sau96I | GGNCC | 1 cut(s) | 586 |
| ScaI | AGTACT | 1 cut(s) | 1175 |
| SchI | GAGTC | 1 cut(s) | 724 |
| ScrFI | CCNGG | 3 cut(s) | 18, 250, 483 |
| SduI | GDGCHC | 3 cut(s) | 99, 1006, 1071 |
| SexAI | ACCWGGT | 1 cut(s) | 481 |
| SfaNI | GCATC | 2 cut(s) | 420, 1188 |
| SfcI | CTRYAG | 1 cut(s) | 1177 |
| SinI | GGWCC | 1 cut(s) | 586 |
| SmlI | CTYRAG | 2 cut(s) | 231, 825 |
| SmoI | CTYRAG | 2 cut(s) | 231, 825 |
| Sse9I | AATT | 4 cut(s) | 90, 749, 782, 1042 |
| SseBI | AGGCCT | 1 cut(s) | 317 |
| SsiI | CCGC | 4 cut(s) | 42, 144, 177, 1090 |
| SspI | AATATT | 1 cut(s) | 394 |
| SspMI | CTAG | 1 cut(s) | 303 |
| SstI | GAGCTC | 1 cut(s) | 1071 |
| StuI | AGGCCT | 1 cut(s) | 317 |
| StyD4I | CCNGG | 3 cut(s) | 16, 248, 481 |
| TaaI | ACNGT | 3 cut(s) | 901, 1064, 1181 |
| TaiI | ACGT | 2 cut(s) | 220, 1009 |
| TaqI | TCGA | 3 cut(s) | 75, 165, 1099 |
| TaqII | GACCGA | 1 cut(s) | 951 |
| TasI | AATT | 4 cut(s) | 90, 749, 782, 1042 |
| TatI | WGTACW | 1 cut(s) | 1173 |
| TfiI | GAWTC | 9 cut(s) | 13, 162, 181, 205, 544, 554, 741, 1101, 1153 |
| Tru1I | TTAA | 3 cut(s) | 126, 534, 1134 |
| Tru9I | TTAA | 3 cut(s) | 126, 534, 1134 |
| TscAI | CASTG | 2 cut(s) | 705, 904 |
| TseFI | GTSAC | 2 cut(s) | 494, 887 |
| Tsp45I | GTSAC | 2 cut(s) | 494, 887 |
| TspDTI | ATGAA | 5 cut(s) | 452, 567, 576, 965, 1220 |
| TspGWI | ACGGA | 1 cut(s) | 265 |
| TspRI | CASTG | 2 cut(s) | 705, 904 |
| VpaK11BI | GGWCC | 1 cut(s) | 586 |
| XapI | RAATTY | 1 cut(s) | 782 |
| XbaI | TCTAGA | 1 cut(s) | 302 |
| XceI | RCATGY | 3 cut(s) | 389, 407, 925 |
| XmiI | GTMKAC | 1 cut(s) | 150 |
| XspI | CTAG | 1 cut(s) | 303 |
| ZrmI | AGTACT | 1 cut(s) | 1175 |
| Zsp2I | ATGCAT | 1 cut(s) | 915 |