pycom111g04510

Eukaryotic initiation factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
2738275 .. 2739875
1601 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g04510.5

Sequence Viewer

Length: 957 bp
ATGAAAATCCCCTTTCACAAACCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAAAATTAGTTCAACGAATCAATCAAATTACGGTCATCGGCATGGCGGATTCGGTGACGATGGATGCGTTAGAGGCGATCACGACCTTCGAATCGATGCAGTTAAACGACGACGTTCTCAGAGGCATCTACCACTTCGGCTTCCAGAAGCCCTCCGCCATCCAGCAGCGCGCCCTTGTCCCTATCATCGGCGGCCACGACGTCATAGCCCAGGCCCAGTCTGGCACCGGAAAAACGTCCATGATTGCCGTCGCTGTCTGCCAGCTCGCCAACACCGCCTCCAGGGAGGTCCAGGCGCTGATACTCTCGCCGACGAGGGAACTGGCGGCGCAGACGGAGAAGGTGGTGCTGGCGGTTGGGGGTTTCGTGAATGTACAGGCGCATGCTTGTGTTGGAGGCAAAAGCGTGGGCGAGGATATCAGAAAGCTTGAGCACGGGGTCCATGTGGTGTCCGGAACACCCGGCAGAGTCTGCGACATGATCAGGAGGGGAGCTCTGCGCACCCGATCGATCAAATTGTTAGTTCTGGATGAAGCTGATGAGATGCTGACCAGAGAATTCAAGGATCAGATTTACGAGGTCTACCGATATCTTCGACCTGACCTGCAGGTTTGCTTAATTTCCGCTACACTTCCTCAAGAAATTTTGGAGATGACCAACAAGTTTATGACTGACCCCGTTAGGATCCTTGTCAATCGTGATGAATTGACTTTGGAGGGGATCAAGCAGTTTTTCGTTGCGGTTGAAAGAGAAGAATGGAAGTTTGACACTTTATGTGATCTGTATGATAATCTTACAATTACTCAAGCTGTTATCTTTTGCAACACAAAGCAAAAGGTAAAGTGTTATTTACCACTCGAGTTGATATTTGATACTAATGTCGTGAGTTTTGATTAG

Protein Analysis

319

Amino Acids

35.8

Weight (kDa)

9.05

Isoelectric Point (pI)

26.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 264
Acc16I TGCGCA 1 cut(s) 560
Acc36I ACCTGC 2 cut(s) 658, 672
AccB1I GGYRCC 1 cut(s) 284
AccI GTMKAC 1 cut(s) 642
AccII CGCG 1 cut(s) 231
AccIII TCCGGA 1 cut(s) 512
AciI CCGC 8 cut(s) 107, 216, 252, 336, 386, 413, 684, 800
AclWI GGATC 4 cut(s) 633, 739, 752, 788
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 2 cut(s) 617, 702
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 1 cut(s) 435
AfiI CCNNNNNNNGG 2 cut(s) 248, 342
AgsI TTSAA 3 cut(s) 74, 622, 806
AjnI CCWGG 3 cut(s) 270, 341, 351
AluBI AGCT 5 cut(s) 325, 487, 554, 596, 869
AluI AGCT 5 cut(s) 325, 487, 554, 596, 869
Alw21I GWGCWC 2 cut(s) 495, 556
AlwI GGATC 4 cut(s) 633, 739, 752, 788
AlwNI CAGNNNCTG 2 cut(s) 358, 531
Ama87I CYCGRG 1 cut(s) 917
Aor13HI TCCGGA 1 cut(s) 512
AoxI GGCC 2 cut(s) 253, 273
ApeKI GCWGC 1 cut(s) 226
ApoI RAATTY 2 cut(s) 617, 702
AspLEI GCGC 6 cut(s) 231, 233, 358, 391, 442, 561
AspS9I GGNCC 3 cut(s) 274, 349, 499
AsuC2I CCSGG 1 cut(s) 522
AsuHPI GGTGA 1 cut(s) 127
AsuII TTCGAA 1 cut(s) 150
AvaI CYCGRG 1 cut(s) 917
AvaII GGWCC 2 cut(s) 349, 499
BaeI ACNNNNGTAYC 2 cut(s) 924, 957
BamHI GGATCC 1 cut(s) 744
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 1 cut(s) 556
Bbv12I GWGCWC 2 cut(s) 495, 556
BbvI GCAGC 1 cut(s) 238
BccI CCATC 2 cut(s) 115, 227
BceAI ACGGC 1 cut(s) 293
BciT130I CCWGG 3 cut(s) 272, 343, 353
BclI TGATCA 1 cut(s) 540
BcnI CCSGG 1 cut(s) 522
BfmI CTRYAG 1 cut(s) 665
BfoI RGCGCY 1 cut(s) 359
BfuAI ACCTGC 2 cut(s) 658, 672
BisI GCNGC 3 cut(s) 227, 253, 387
BlsI GCNGC 3 cut(s) 228, 254, 388
Bme1390I CCNGG 4 cut(s) 272, 343, 353, 522
Bme18I GGWCC 2 cut(s) 349, 499
BmeT110I CYCGRG 1 cut(s) 917
BmgT120I GGNCC 3 cut(s) 274, 349, 499
BmiI GGNNCC 3 cut(s) 286, 500, 746
BmrFI CCNGG 4 cut(s) 272, 343, 353, 522
BmrI ACTGGG 1 cut(s) 271
BmsI GCATC 4 cut(s) 115, 147, 195, 594
BmuI ACTGGG 1 cut(s) 271
BplI GAGNNNNNCTC 2 cut(s) 538, 570
BpmI CTGGAG 1 cut(s) 325
Bpu14I TTCGAA 1 cut(s) 150
BpuEI CTTGAG 3 cut(s) 509, 681, 849
BpuMI CCSGG 1 cut(s) 522
Bsa29I ATCGAT 2 cut(s) 155, 569
BsaHI GRCGYC 1 cut(s) 261
BsaJI CCNNGG 2 cut(s) 270, 342
BsaWI WCCGGW 2 cut(s) 287, 512
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 2 cut(s) 248, 342
Bse1I ACTGG 2 cut(s) 277, 387
BseAI TCCGGA 1 cut(s) 512
BseBI CCWGG 3 cut(s) 272, 343, 353
BseCI ATCGAT 2 cut(s) 155, 569
BseDI CCNNGG 2 cut(s) 270, 342
BseGI GGATG 3 cut(s) 130, 219, 595
BseLI CCNNNNNNNGG 2 cut(s) 248, 342
BseMII CTCAG 1 cut(s) 193
BseNI ACTGG 2 cut(s) 277, 387
BsePI GCGCGC 1 cut(s) 229
BseXI GCAGC 1 cut(s) 238
Bsh1236I CGCG 1 cut(s) 231
Bsh1285I CGRYCG 1 cut(s) 569
BshFI GGCC 2 cut(s) 255, 275
BshNI GGYRCC 1 cut(s) 284
BshVI ATCGAT 2 cut(s) 155, 569
BsiEI CGRYCG 1 cut(s) 569
BsiHKAI GWGCWC 2 cut(s) 495, 556
BsiHKCI CYCGRG 1 cut(s) 917
BsiSI CCGG 3 cut(s) 288, 513, 522
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 2 cut(s) 248, 342
BsmFI GGGAC 1 cut(s) 224
BsnI GGCC 2 cut(s) 255, 275
BsoBI CYCGRG 1 cut(s) 917
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 2 cut(s) 495, 556
Bsp13I TCCGGA 1 cut(s) 512
Bsp1407I TGTACA 1 cut(s) 433
Bsp143I GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
BspACI CCGC 8 cut(s) 107, 216, 252, 336, 386, 413, 684, 800
BspANI GGCC 2 cut(s) 255, 275
BspCNI CTCAG 1 cut(s) 192
BspDI ATCGAT 2 cut(s) 155, 569
BspEI TCCGGA 1 cut(s) 512
BspFNI CGCG 1 cut(s) 231
BspLI GGNNCC 3 cut(s) 286, 500, 746
BspMAI CTGCAG 1 cut(s) 669
BspMI ACCTGC 2 cut(s) 658, 672
BspPI GGATC 4 cut(s) 633, 739, 752, 788
BspT104I TTCGAA 1 cut(s) 150
BspT107I GGYRCC 1 cut(s) 284
BsrGI TGTACA 1 cut(s) 433
BsrI ACTGG 2 cut(s) 277, 387
BssECI CCNNGG 2 cut(s) 270, 342
BssHII GCGCGC 1 cut(s) 229
BssMI GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
BssNI GRCGYC 1 cut(s) 261
Bst2UI CCWGG 3 cut(s) 272, 343, 353
Bst4CI ACNGT 1 cut(s) 94
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 531
BstAUI TGTACA 1 cut(s) 433
BstBI TTCGAA 1 cut(s) 150
BstC8I GCNNGC 5 cut(s) 231, 323, 327, 411, 444
BstDEI CTNAG 1 cut(s) 179
BstF5I GGATG 3 cut(s) 130, 219, 595
BstFNI CGCG 1 cut(s) 231
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 6 cut(s) 231, 233, 358, 391, 442, 561
BstKTI GATC 8 cut(s) 141, 543, 569, 573, 628, 747, 783, 841
BstMBI GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
BstMCI CGRYCG 1 cut(s) 569
BstMWI GCNNNNNNNGC 3 cut(s) 134, 335, 531
BstNI CCWGG 3 cut(s) 272, 343, 353
BstNSI RCATGY 1 cut(s) 446
BstSCI CCNGG 4 cut(s) 270, 341, 351, 520
BstSFI CTRYAG 1 cut(s) 665
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 1 cut(s) 238
BstX2I RGATCY 1 cut(s) 744
BstYI RGATCY 1 cut(s) 744
Bsu15I ATCGAT 2 cut(s) 155, 569
BsuRI GGCC 2 cut(s) 255, 275
BsuTUI ATCGAT 2 cut(s) 155, 569
BtsCI GGATG 3 cut(s) 130, 219, 595
BveI ACCTGC 2 cut(s) 658, 672
Cac8I GCNNGC 5 cut(s) 231, 323, 327, 411, 444
CaiI CAGNNNCTG 2 cut(s) 358, 531
CfoI GCGC 6 cut(s) 231, 233, 358, 391, 442, 561
Cfr13I GGNCC 3 cut(s) 274, 349, 499
ClaI ATCGAT 2 cut(s) 155, 569
Csp6I GTAC 1 cut(s) 434
CspCI CAANNNNNGTGG 2 cut(s) 903, 938
CviAII CATG 5 cut(s) 103, 301, 443, 503, 538
CviQI GTAC 1 cut(s) 434
DdeI CTNAG 1 cut(s) 179
DpnI GATC 8 cut(s) 140, 542, 568, 572, 627, 746, 782, 840
DpnII GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
EaeI YGGCCR 1 cut(s) 253
EciI GGCGGA 2 cut(s) 122, 205
Ecl136II GAGCTC 1 cut(s) 554
Eco24I GRGCYC 1 cut(s) 556
Eco32I GATATC 2 cut(s) 478, 650
Eco47I GGWCC 2 cut(s) 349, 499
Eco53kI GAGCTC 1 cut(s) 554
Eco88I CYCGRG 1 cut(s) 917
EcoICRI GAGCTC 1 cut(s) 554
EcoRI GAATTC 1 cut(s) 617
EcoRII CCWGG 3 cut(s) 270, 341, 351
EcoRV GATATC 2 cut(s) 478, 650
EcoT38I GRGCYC 1 cut(s) 556
FaeI CATG 5 cut(s) 106, 304, 446, 506, 541
FaiI YATR 9 cut(s) 104, 266, 302, 444, 504, 539, 728, 835, 846
FaqI GGGAC 1 cut(s) 224
FatI CATG 5 cut(s) 102, 300, 442, 502, 537
FbaI TGATCA 1 cut(s) 540
FblI GTMKAC 1 cut(s) 642
Fnu4HI GCNGC 3 cut(s) 227, 253, 387
FokI GGATG 3 cut(s) 137, 206, 602
FriOI GRGCYC 1 cut(s) 556
Fsp4HI GCNGC 3 cut(s) 227, 253, 387
FspI TGCGCA 1 cut(s) 560
GlaI GCGC 6 cut(s) 230, 232, 357, 390, 441, 560
GluI GCNGC 3 cut(s) 227, 253, 387
GsuI CTGGAG 1 cut(s) 325
HaeII RGCGCY 1 cut(s) 359
HaeIII GGCC 2 cut(s) 255, 275
HapII CCGG 3 cut(s) 288, 513, 522
HhaI GCGC 6 cut(s) 231, 233, 358, 391, 442, 561
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 5 cut(s) 106, 304, 446, 506, 541
Hin6I GCGC 6 cut(s) 229, 231, 356, 389, 440, 559
HinP1I GCGC 6 cut(s) 229, 231, 356, 389, 440, 559
HindIII AAGCTT 1 cut(s) 485
HinfI GANTC 4 cut(s) 78, 110, 152, 528
HpaII CCGG 3 cut(s) 288, 513, 522
HphI GGTGA 1 cut(s) 127
Hpy166II GTNNAC 1 cut(s) 643
Hpy188I TCNGA 3 cut(s) 182, 482, 630
Hpy188III TCNNGA 9 cut(s) 142, 205, 427, 513, 544, 587, 698, 758, 943
Hpy8I GTNNAC 1 cut(s) 643
Hpy99I CGWCG 5 cut(s) 173, 176, 263, 314, 376
HpyAV CCTTC 2 cut(s) 157, 394
HpyCH4III ACNGT 1 cut(s) 94
HpyCH4IV ACGT 3 cut(s) 174, 261, 296
HpyCH4V TGCA 3 cut(s) 160, 667, 882
HpyF10VI GCNNNNNNNGC 3 cut(s) 134, 335, 531
HpyF3I CTNAG 1 cut(s) 179
HpySE526I ACGT 3 cut(s) 174, 261, 296
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 5 cut(s) 106, 304, 446, 506, 541
HspAI GCGC 6 cut(s) 229, 231, 356, 389, 440, 559
Kpn2I TCCGGA 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 540
Kzo9I GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
LmnI GCTCC 1 cut(s) 551
Lsp1109I GCAGC 1 cut(s) 238
LweI GCATC 4 cut(s) 115, 147, 195, 594
MaeII ACGT 3 cut(s) 174, 261, 296
MaeIII GTNAC 1 cut(s) 115
MalI GATC 8 cut(s) 140, 542, 568, 572, 627, 746, 782, 840
MboI GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
MboII GAAGA 2 cut(s) 644, 824
MflI RGATCY 1 cut(s) 744
MhlI GDGCHC 2 cut(s) 495, 556
MluCI AATT 8 cut(s) 65, 87, 575, 617, 678, 702, 764, 858
MlyI GAGTC 1 cut(s) 537
MmeI TCCRAC 1 cut(s) 433
MroI TCCGGA 1 cut(s) 512
MseI TTAA 2 cut(s) 164, 677
MslI CAYNNNNRTG 2 cut(s) 101, 447
MspI CCGG 3 cut(s) 288, 513, 522
MspR9I CCNGG 4 cut(s) 272, 343, 353, 522
MvaI CCWGG 3 cut(s) 272, 343, 353
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 3 cut(s) 134, 335, 531
NciI CCSGG 1 cut(s) 522
NdeII GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
NlaIII CATG 5 cut(s) 106, 304, 446, 506, 541
NlaIV GGNNCC 3 cut(s) 286, 500, 746
NmuCI GTSAC 1 cut(s) 115
NsbI TGCGCA 1 cut(s) 560
NspI RCATGY 1 cut(s) 446
NspV TTCGAA 1 cut(s) 150
PaeI GCATGC 1 cut(s) 446
PaeR7I CTCGAG 1 cut(s) 917
PauI GCGCGC 1 cut(s) 229
PcsI WCGNNNNNNNCGW 2 cut(s) 125, 255
PfeI GAWTC 3 cut(s) 78, 110, 152
PkrI GCNGC 3 cut(s) 228, 254, 388
Ple19I CGATCG 1 cut(s) 569
PleI GAGTC 1 cut(s) 536
PpsI GAGTC 1 cut(s) 536
Psp124BI GAGCTC 1 cut(s) 556
Psp6I CCWGG 3 cut(s) 270, 341, 351
PspGI CCWGG 3 cut(s) 270, 341, 351
PspN4I GGNNCC 3 cut(s) 286, 500, 746
PspPI GGNCC 3 cut(s) 274, 349, 499
PspXI VCTCGAGB 1 cut(s) 917
PstI CTGCAG 1 cut(s) 669
PstNI CAGNNNCTG 2 cut(s) 358, 531
PsuI RGATCY 1 cut(s) 744
PteI GCGCGC 1 cut(s) 229
PvuI CGATCG 1 cut(s) 569
RsaI GTAC 1 cut(s) 435
RsaNI GTAC 1 cut(s) 434
RseI CAYNNNNRTG 2 cut(s) 101, 447
SacI GAGCTC 1 cut(s) 556
SaqAI TTAA 2 cut(s) 164, 677
SatI GCNGC 3 cut(s) 227, 253, 387
Sau3AI GATC 8 cut(s) 138, 540, 566, 570, 625, 744, 780, 838
Sau96I GGNCC 3 cut(s) 274, 349, 499
SbfI CCTGCAGG 1 cut(s) 669
SchI GAGTC 1 cut(s) 537
ScrFI CCNGG 4 cut(s) 272, 343, 353, 522
SdaI CCTGCAGG 1 cut(s) 669
SduI GDGCHC 2 cut(s) 495, 556
SfaNI GCATC 4 cut(s) 115, 147, 195, 594
SfcI CTRYAG 1 cut(s) 665
Sfr274I CTCGAG 1 cut(s) 917
SfuI TTCGAA 1 cut(s) 150
SinI GGWCC 2 cut(s) 349, 499
SlaI CTCGAG 1 cut(s) 917
SmiMI CAYNNNNRTG 2 cut(s) 101, 447
SmlI CTYRAG 4 cut(s) 488, 696, 864, 917
SmoI CTYRAG 4 cut(s) 488, 696, 864, 917
SphI GCATGC 1 cut(s) 446
Sse8387I CCTGCAGG 1 cut(s) 669
Sse9I AATT 8 cut(s) 65, 87, 575, 617, 678, 702, 764, 858
SsiI CCGC 8 cut(s) 107, 216, 252, 336, 386, 413, 684, 800
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 4 cut(s) 270, 341, 351, 520
TaaI ACNGT 1 cut(s) 94
TaiI ACGT 3 cut(s) 177, 264, 299
TaqI TCGA 5 cut(s) 150, 155, 569, 655, 918
TasI AATT 8 cut(s) 65, 87, 575, 617, 678, 702, 764, 858
TatI WGTACW 1 cut(s) 433
TauI GCSGC 2 cut(s) 255, 389
TfiI GAWTC 3 cut(s) 78, 110, 152
Tru1I TTAA 2 cut(s) 164, 677
Tru9I TTAA 2 cut(s) 164, 677
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 1 cut(s) 226
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 3 cut(s) 17, 606, 777
TspGWI ACGGA 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 349, 499
XapI RAATTY 2 cut(s) 617, 702
XceI RCATGY 1 cut(s) 446
XcmI CCANNNNNNNNNTGG 1 cut(s) 278
XhoI CTCGAG 1 cut(s) 917
XmiI GTMKAC 1 cut(s) 642
ZraI GACGTC 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.