Eukaryotic initiation factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 264 |
| Acc16I | TGCGCA | 1 cut(s) | 560 |
| Acc36I | ACCTGC | 2 cut(s) | 658, 672 |
| AccB1I | GGYRCC | 1 cut(s) | 284 |
| AccI | GTMKAC | 1 cut(s) | 642 |
| AccII | CGCG | 1 cut(s) | 231 |
| AccIII | TCCGGA | 1 cut(s) | 512 |
| AciI | CCGC | 8 cut(s) | 107, 216, 252, 336, 386, 413, 684, 800 |
| AclWI | GGATC | 4 cut(s) | 633, 739, 752, 788 |
| AcoI | YGGCCR | 1 cut(s) | 253 |
| AcsI | RAATTY | 2 cut(s) | 617, 702 |
| AcyI | GRCGYC | 1 cut(s) | 261 |
| AfaI | GTAC | 1 cut(s) | 435 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 248, 342 |
| AgsI | TTSAA | 3 cut(s) | 74, 622, 806 |
| AjnI | CCWGG | 3 cut(s) | 270, 341, 351 |
| AluBI | AGCT | 5 cut(s) | 325, 487, 554, 596, 869 |
| AluI | AGCT | 5 cut(s) | 325, 487, 554, 596, 869 |
| Alw21I | GWGCWC | 2 cut(s) | 495, 556 |
| AlwI | GGATC | 4 cut(s) | 633, 739, 752, 788 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 358, 531 |
| Ama87I | CYCGRG | 1 cut(s) | 917 |
| Aor13HI | TCCGGA | 1 cut(s) | 512 |
| AoxI | GGCC | 2 cut(s) | 253, 273 |
| ApeKI | GCWGC | 1 cut(s) | 226 |
| ApoI | RAATTY | 2 cut(s) | 617, 702 |
| AspLEI | GCGC | 6 cut(s) | 231, 233, 358, 391, 442, 561 |
| AspS9I | GGNCC | 3 cut(s) | 274, 349, 499 |
| AsuC2I | CCSGG | 1 cut(s) | 522 |
| AsuHPI | GGTGA | 1 cut(s) | 127 |
| AsuII | TTCGAA | 1 cut(s) | 150 |
| AvaI | CYCGRG | 1 cut(s) | 917 |
| AvaII | GGWCC | 2 cut(s) | 349, 499 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 924, 957 |
| BamHI | GGATCC | 1 cut(s) | 744 |
| BanI | GGYRCC | 1 cut(s) | 284 |
| BanII | GRGCYC | 1 cut(s) | 556 |
| Bbv12I | GWGCWC | 2 cut(s) | 495, 556 |
| BbvI | GCAGC | 1 cut(s) | 238 |
| BccI | CCATC | 2 cut(s) | 115, 227 |
| BceAI | ACGGC | 1 cut(s) | 293 |
| BciT130I | CCWGG | 3 cut(s) | 272, 343, 353 |
| BclI | TGATCA | 1 cut(s) | 540 |
| BcnI | CCSGG | 1 cut(s) | 522 |
| BfmI | CTRYAG | 1 cut(s) | 665 |
| BfoI | RGCGCY | 1 cut(s) | 359 |
| BfuAI | ACCTGC | 2 cut(s) | 658, 672 |
| BisI | GCNGC | 3 cut(s) | 227, 253, 387 |
| BlsI | GCNGC | 3 cut(s) | 228, 254, 388 |
| Bme1390I | CCNGG | 4 cut(s) | 272, 343, 353, 522 |
| Bme18I | GGWCC | 2 cut(s) | 349, 499 |
| BmeT110I | CYCGRG | 1 cut(s) | 917 |
| BmgT120I | GGNCC | 3 cut(s) | 274, 349, 499 |
| BmiI | GGNNCC | 3 cut(s) | 286, 500, 746 |
| BmrFI | CCNGG | 4 cut(s) | 272, 343, 353, 522 |
| BmrI | ACTGGG | 1 cut(s) | 271 |
| BmsI | GCATC | 4 cut(s) | 115, 147, 195, 594 |
| BmuI | ACTGGG | 1 cut(s) | 271 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 538, 570 |
| BpmI | CTGGAG | 1 cut(s) | 325 |
| Bpu14I | TTCGAA | 1 cut(s) | 150 |
| BpuEI | CTTGAG | 3 cut(s) | 509, 681, 849 |
| BpuMI | CCSGG | 1 cut(s) | 522 |
| Bsa29I | ATCGAT | 2 cut(s) | 155, 569 |
| BsaHI | GRCGYC | 1 cut(s) | 261 |
| BsaJI | CCNNGG | 2 cut(s) | 270, 342 |
| BsaWI | WCCGGW | 2 cut(s) | 287, 512 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 323, 353 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 248, 342 |
| Bse1I | ACTGG | 2 cut(s) | 277, 387 |
| BseAI | TCCGGA | 1 cut(s) | 512 |
| BseBI | CCWGG | 3 cut(s) | 272, 343, 353 |
| BseCI | ATCGAT | 2 cut(s) | 155, 569 |
| BseDI | CCNNGG | 2 cut(s) | 270, 342 |
| BseGI | GGATG | 3 cut(s) | 130, 219, 595 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 248, 342 |
| BseMII | CTCAG | 1 cut(s) | 193 |
| BseNI | ACTGG | 2 cut(s) | 277, 387 |
| BsePI | GCGCGC | 1 cut(s) | 229 |
| BseXI | GCAGC | 1 cut(s) | 238 |
| Bsh1236I | CGCG | 1 cut(s) | 231 |
| Bsh1285I | CGRYCG | 1 cut(s) | 569 |
| BshFI | GGCC | 2 cut(s) | 255, 275 |
| BshNI | GGYRCC | 1 cut(s) | 284 |
| BshVI | ATCGAT | 2 cut(s) | 155, 569 |
| BsiEI | CGRYCG | 1 cut(s) | 569 |
| BsiHKAI | GWGCWC | 2 cut(s) | 495, 556 |
| BsiHKCI | CYCGRG | 1 cut(s) | 917 |
| BsiSI | CCGG | 3 cut(s) | 288, 513, 522 |
| BslFI | GGGAC | 1 cut(s) | 224 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 248, 342 |
| BsmFI | GGGAC | 1 cut(s) | 224 |
| BsnI | GGCC | 2 cut(s) | 255, 275 |
| BsoBI | CYCGRG | 1 cut(s) | 917 |
| Bsp119I | TTCGAA | 1 cut(s) | 150 |
| Bsp1286I | GDGCHC | 2 cut(s) | 495, 556 |
| Bsp13I | TCCGGA | 1 cut(s) | 512 |
| Bsp1407I | TGTACA | 1 cut(s) | 433 |
| Bsp143I | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| BspACI | CCGC | 8 cut(s) | 107, 216, 252, 336, 386, 413, 684, 800 |
| BspANI | GGCC | 2 cut(s) | 255, 275 |
| BspCNI | CTCAG | 1 cut(s) | 192 |
| BspDI | ATCGAT | 2 cut(s) | 155, 569 |
| BspEI | TCCGGA | 1 cut(s) | 512 |
| BspFNI | CGCG | 1 cut(s) | 231 |
| BspLI | GGNNCC | 3 cut(s) | 286, 500, 746 |
| BspMAI | CTGCAG | 1 cut(s) | 669 |
| BspMI | ACCTGC | 2 cut(s) | 658, 672 |
| BspPI | GGATC | 4 cut(s) | 633, 739, 752, 788 |
| BspT104I | TTCGAA | 1 cut(s) | 150 |
| BspT107I | GGYRCC | 1 cut(s) | 284 |
| BsrGI | TGTACA | 1 cut(s) | 433 |
| BsrI | ACTGG | 2 cut(s) | 277, 387 |
| BssECI | CCNNGG | 2 cut(s) | 270, 342 |
| BssHII | GCGCGC | 1 cut(s) | 229 |
| BssMI | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| BssNI | GRCGYC | 1 cut(s) | 261 |
| Bst2UI | CCWGG | 3 cut(s) | 272, 343, 353 |
| Bst4CI | ACNGT | 1 cut(s) | 94 |
| BstACI | GRCGYC | 1 cut(s) | 261 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 531 |
| BstAUI | TGTACA | 1 cut(s) | 433 |
| BstBI | TTCGAA | 1 cut(s) | 150 |
| BstC8I | GCNNGC | 5 cut(s) | 231, 323, 327, 411, 444 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstF5I | GGATG | 3 cut(s) | 130, 219, 595 |
| BstFNI | CGCG | 1 cut(s) | 231 |
| BstH2I | RGCGCY | 1 cut(s) | 359 |
| BstHHI | GCGC | 6 cut(s) | 231, 233, 358, 391, 442, 561 |
| BstKTI | GATC | 8 cut(s) | 141, 543, 569, 573, 628, 747, 783, 841 |
| BstMBI | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| BstMCI | CGRYCG | 1 cut(s) | 569 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 134, 335, 531 |
| BstNI | CCWGG | 3 cut(s) | 272, 343, 353 |
| BstNSI | RCATGY | 1 cut(s) | 446 |
| BstSCI | CCNGG | 4 cut(s) | 270, 341, 351, 520 |
| BstSFI | CTRYAG | 1 cut(s) | 665 |
| BstUI | CGCG | 1 cut(s) | 231 |
| BstV1I | GCAGC | 1 cut(s) | 238 |
| BstX2I | RGATCY | 1 cut(s) | 744 |
| BstYI | RGATCY | 1 cut(s) | 744 |
| Bsu15I | ATCGAT | 2 cut(s) | 155, 569 |
| BsuRI | GGCC | 2 cut(s) | 255, 275 |
| BsuTUI | ATCGAT | 2 cut(s) | 155, 569 |
| BtsCI | GGATG | 3 cut(s) | 130, 219, 595 |
| BveI | ACCTGC | 2 cut(s) | 658, 672 |
| Cac8I | GCNNGC | 5 cut(s) | 231, 323, 327, 411, 444 |
| CaiI | CAGNNNCTG | 2 cut(s) | 358, 531 |
| CfoI | GCGC | 6 cut(s) | 231, 233, 358, 391, 442, 561 |
| Cfr13I | GGNCC | 3 cut(s) | 274, 349, 499 |
| ClaI | ATCGAT | 2 cut(s) | 155, 569 |
| Csp6I | GTAC | 1 cut(s) | 434 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 903, 938 |
| CviAII | CATG | 5 cut(s) | 103, 301, 443, 503, 538 |
| CviQI | GTAC | 1 cut(s) | 434 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DpnI | GATC | 8 cut(s) | 140, 542, 568, 572, 627, 746, 782, 840 |
| DpnII | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| EaeI | YGGCCR | 1 cut(s) | 253 |
| EciI | GGCGGA | 2 cut(s) | 122, 205 |
| Ecl136II | GAGCTC | 1 cut(s) | 554 |
| Eco24I | GRGCYC | 1 cut(s) | 556 |
| Eco32I | GATATC | 2 cut(s) | 478, 650 |
| Eco47I | GGWCC | 2 cut(s) | 349, 499 |
| Eco53kI | GAGCTC | 1 cut(s) | 554 |
| Eco88I | CYCGRG | 1 cut(s) | 917 |
| EcoICRI | GAGCTC | 1 cut(s) | 554 |
| EcoRI | GAATTC | 1 cut(s) | 617 |
| EcoRII | CCWGG | 3 cut(s) | 270, 341, 351 |
| EcoRV | GATATC | 2 cut(s) | 478, 650 |
| EcoT38I | GRGCYC | 1 cut(s) | 556 |
| FaeI | CATG | 5 cut(s) | 106, 304, 446, 506, 541 |
| FaiI | YATR | 9 cut(s) | 104, 266, 302, 444, 504, 539, 728, 835, 846 |
| FaqI | GGGAC | 1 cut(s) | 224 |
| FatI | CATG | 5 cut(s) | 102, 300, 442, 502, 537 |
| FbaI | TGATCA | 1 cut(s) | 540 |
| FblI | GTMKAC | 1 cut(s) | 642 |
| Fnu4HI | GCNGC | 3 cut(s) | 227, 253, 387 |
| FokI | GGATG | 3 cut(s) | 137, 206, 602 |
| FriOI | GRGCYC | 1 cut(s) | 556 |
| Fsp4HI | GCNGC | 3 cut(s) | 227, 253, 387 |
| FspI | TGCGCA | 1 cut(s) | 560 |
| GlaI | GCGC | 6 cut(s) | 230, 232, 357, 390, 441, 560 |
| GluI | GCNGC | 3 cut(s) | 227, 253, 387 |
| GsuI | CTGGAG | 1 cut(s) | 325 |
| HaeII | RGCGCY | 1 cut(s) | 359 |
| HaeIII | GGCC | 2 cut(s) | 255, 275 |
| HapII | CCGG | 3 cut(s) | 288, 513, 522 |
| HhaI | GCGC | 6 cut(s) | 231, 233, 358, 391, 442, 561 |
| Hin1I | GRCGYC | 1 cut(s) | 261 |
| Hin1II | CATG | 5 cut(s) | 106, 304, 446, 506, 541 |
| Hin6I | GCGC | 6 cut(s) | 229, 231, 356, 389, 440, 559 |
| HinP1I | GCGC | 6 cut(s) | 229, 231, 356, 389, 440, 559 |
| HindIII | AAGCTT | 1 cut(s) | 485 |
| HinfI | GANTC | 4 cut(s) | 78, 110, 152, 528 |
| HpaII | CCGG | 3 cut(s) | 288, 513, 522 |
| HphI | GGTGA | 1 cut(s) | 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 643 |
| Hpy188I | TCNGA | 3 cut(s) | 182, 482, 630 |
| Hpy188III | TCNNGA | 9 cut(s) | 142, 205, 427, 513, 544, 587, 698, 758, 943 |
| Hpy8I | GTNNAC | 1 cut(s) | 643 |
| Hpy99I | CGWCG | 5 cut(s) | 173, 176, 263, 314, 376 |
| HpyAV | CCTTC | 2 cut(s) | 157, 394 |
| HpyCH4III | ACNGT | 1 cut(s) | 94 |
| HpyCH4IV | ACGT | 3 cut(s) | 174, 261, 296 |
| HpyCH4V | TGCA | 3 cut(s) | 160, 667, 882 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 134, 335, 531 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| HpySE526I | ACGT | 3 cut(s) | 174, 261, 296 |
| Hsp92I | GRCGYC | 1 cut(s) | 261 |
| Hsp92II | CATG | 5 cut(s) | 106, 304, 446, 506, 541 |
| HspAI | GCGC | 6 cut(s) | 229, 231, 356, 389, 440, 559 |
| Kpn2I | TCCGGA | 1 cut(s) | 512 |
| Ksp22I | TGATCA | 1 cut(s) | 540 |
| Kzo9I | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| LmnI | GCTCC | 1 cut(s) | 551 |
| Lsp1109I | GCAGC | 1 cut(s) | 238 |
| LweI | GCATC | 4 cut(s) | 115, 147, 195, 594 |
| MaeII | ACGT | 3 cut(s) | 174, 261, 296 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MalI | GATC | 8 cut(s) | 140, 542, 568, 572, 627, 746, 782, 840 |
| MboI | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| MboII | GAAGA | 2 cut(s) | 644, 824 |
| MflI | RGATCY | 1 cut(s) | 744 |
| MhlI | GDGCHC | 2 cut(s) | 495, 556 |
| MluCI | AATT | 8 cut(s) | 65, 87, 575, 617, 678, 702, 764, 858 |
| MlyI | GAGTC | 1 cut(s) | 537 |
| MmeI | TCCRAC | 1 cut(s) | 433 |
| MroI | TCCGGA | 1 cut(s) | 512 |
| MseI | TTAA | 2 cut(s) | 164, 677 |
| MslI | CAYNNNNRTG | 2 cut(s) | 101, 447 |
| MspI | CCGG | 3 cut(s) | 288, 513, 522 |
| MspR9I | CCNGG | 4 cut(s) | 272, 343, 353, 522 |
| MvaI | CCWGG | 3 cut(s) | 272, 343, 353 |
| MvnI | CGCG | 1 cut(s) | 231 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 134, 335, 531 |
| NciI | CCSGG | 1 cut(s) | 522 |
| NdeII | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| NlaIII | CATG | 5 cut(s) | 106, 304, 446, 506, 541 |
| NlaIV | GGNNCC | 3 cut(s) | 286, 500, 746 |
| NmuCI | GTSAC | 1 cut(s) | 115 |
| NsbI | TGCGCA | 1 cut(s) | 560 |
| NspI | RCATGY | 1 cut(s) | 446 |
| NspV | TTCGAA | 1 cut(s) | 150 |
| PaeI | GCATGC | 1 cut(s) | 446 |
| PaeR7I | CTCGAG | 1 cut(s) | 917 |
| PauI | GCGCGC | 1 cut(s) | 229 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 125, 255 |
| PfeI | GAWTC | 3 cut(s) | 78, 110, 152 |
| PkrI | GCNGC | 3 cut(s) | 228, 254, 388 |
| Ple19I | CGATCG | 1 cut(s) | 569 |
| PleI | GAGTC | 1 cut(s) | 536 |
| PpsI | GAGTC | 1 cut(s) | 536 |
| Psp124BI | GAGCTC | 1 cut(s) | 556 |
| Psp6I | CCWGG | 3 cut(s) | 270, 341, 351 |
| PspGI | CCWGG | 3 cut(s) | 270, 341, 351 |
| PspN4I | GGNNCC | 3 cut(s) | 286, 500, 746 |
| PspPI | GGNCC | 3 cut(s) | 274, 349, 499 |
| PspXI | VCTCGAGB | 1 cut(s) | 917 |
| PstI | CTGCAG | 1 cut(s) | 669 |
| PstNI | CAGNNNCTG | 2 cut(s) | 358, 531 |
| PsuI | RGATCY | 1 cut(s) | 744 |
| PteI | GCGCGC | 1 cut(s) | 229 |
| PvuI | CGATCG | 1 cut(s) | 569 |
| RsaI | GTAC | 1 cut(s) | 435 |
| RsaNI | GTAC | 1 cut(s) | 434 |
| RseI | CAYNNNNRTG | 2 cut(s) | 101, 447 |
| SacI | GAGCTC | 1 cut(s) | 556 |
| SaqAI | TTAA | 2 cut(s) | 164, 677 |
| SatI | GCNGC | 3 cut(s) | 227, 253, 387 |
| Sau3AI | GATC | 8 cut(s) | 138, 540, 566, 570, 625, 744, 780, 838 |
| Sau96I | GGNCC | 3 cut(s) | 274, 349, 499 |
| SbfI | CCTGCAGG | 1 cut(s) | 669 |
| SchI | GAGTC | 1 cut(s) | 537 |
| ScrFI | CCNGG | 4 cut(s) | 272, 343, 353, 522 |
| SdaI | CCTGCAGG | 1 cut(s) | 669 |
| SduI | GDGCHC | 2 cut(s) | 495, 556 |
| SfaNI | GCATC | 4 cut(s) | 115, 147, 195, 594 |
| SfcI | CTRYAG | 1 cut(s) | 665 |
| Sfr274I | CTCGAG | 1 cut(s) | 917 |
| SfuI | TTCGAA | 1 cut(s) | 150 |
| SinI | GGWCC | 2 cut(s) | 349, 499 |
| SlaI | CTCGAG | 1 cut(s) | 917 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 101, 447 |
| SmlI | CTYRAG | 4 cut(s) | 488, 696, 864, 917 |
| SmoI | CTYRAG | 4 cut(s) | 488, 696, 864, 917 |
| SphI | GCATGC | 1 cut(s) | 446 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 669 |
| Sse9I | AATT | 8 cut(s) | 65, 87, 575, 617, 678, 702, 764, 858 |
| SsiI | CCGC | 8 cut(s) | 107, 216, 252, 336, 386, 413, 684, 800 |
| SstI | GAGCTC | 1 cut(s) | 556 |
| StyD4I | CCNGG | 4 cut(s) | 270, 341, 351, 520 |
| TaaI | ACNGT | 1 cut(s) | 94 |
| TaiI | ACGT | 3 cut(s) | 177, 264, 299 |
| TaqI | TCGA | 5 cut(s) | 150, 155, 569, 655, 918 |
| TasI | AATT | 8 cut(s) | 65, 87, 575, 617, 678, 702, 764, 858 |
| TatI | WGTACW | 1 cut(s) | 433 |
| TauI | GCSGC | 2 cut(s) | 255, 389 |
| TfiI | GAWTC | 3 cut(s) | 78, 110, 152 |
| Tru1I | TTAA | 2 cut(s) | 164, 677 |
| Tru9I | TTAA | 2 cut(s) | 164, 677 |
| TseFI | GTSAC | 1 cut(s) | 115 |
| TseI | GCWGC | 1 cut(s) | 226 |
| Tsp45I | GTSAC | 1 cut(s) | 115 |
| TspDTI | ATGAA | 3 cut(s) | 17, 606, 777 |
| TspGWI | ACGGA | 1 cut(s) | 410 |
| VpaK11BI | GGWCC | 2 cut(s) | 349, 499 |
| XapI | RAATTY | 2 cut(s) | 617, 702 |
| XceI | RCATGY | 1 cut(s) | 446 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 278 |
| XhoI | CTCGAG | 1 cut(s) | 917 |
| XmiI | GTMKAC | 1 cut(s) | 642 |
| ZraI | GACGTC | 1 cut(s) | 262 |