Eukaryotic initiation factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 204 |
| Acc36I | ACCTGC | 1 cut(s) | 994 |
| AccI | GTMKAC | 3 cut(s) | 270, 496, 582 |
| AccII | CGCG | 2 cut(s) | 198, 626 |
| AciI | CCGC | 5 cut(s) | 21, 24, 156, 196, 624 |
| AclWI | GGATC | 4 cut(s) | 668, 679, 692, 1139 |
| AcsI | RAATTY | 3 cut(s) | 570, 642, 662 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AcyI | GRCGYC | 1 cut(s) | 201 |
| AfaI | GTAC | 2 cut(s) | 1154, 1162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AflII | CTTAAG | 1 cut(s) | 1135 |
| AgsI | TTSAA | 4 cut(s) | 377, 562, 746, 1148 |
| AhlI | ACTAGT | 1 cut(s) | 866 |
| AjnI | CCWGG | 1 cut(s) | 687 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1054, 1086 |
| AluBI | AGCT | 9 cut(s) | 46, 87, 115, 209, 254, 427, 706, 809, 1048 |
| AluI | AGCT | 9 cut(s) | 46, 87, 115, 209, 254, 427, 706, 809, 1048 |
| Alw21I | GWGCWC | 1 cut(s) | 117 |
| Alw26I | GTCTC | 3 cut(s) | 312, 891, 1134 |
| AlwI | GGATC | 4 cut(s) | 668, 679, 692, 1139 |
| Ama87I | CYCGRG | 1 cut(s) | 984 |
| AoxI | GGCC | 2 cut(s) | 171, 193 |
| ApeKI | GCWGC | 1 cut(s) | 326 |
| ApoI | RAATTY | 3 cut(s) | 570, 642, 662 |
| AspLEI | GCGC | 1 cut(s) | 382 |
| AspS9I | GGNCC | 2 cut(s) | 171, 193 |
| AsuC2I | CCSGG | 1 cut(s) | 462 |
| AsuHPI | GGTGA | 1 cut(s) | 422 |
| AvaI | CYCGRG | 1 cut(s) | 984 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1144, 1177 |
| BamHI | GGATCC | 1 cut(s) | 684 |
| BanII | GRGCYC | 2 cut(s) | 117, 985 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 557, 589 |
| BauI | CACGAG | 1 cut(s) | 954 |
| Bbv12I | GWGCWC | 1 cut(s) | 117 |
| BbvI | GCAGC | 1 cut(s) | 313 |
| BccI | CCATC | 2 cut(s) | 167, 182 |
| BceAI | ACGGC | 2 cut(s) | 43, 154 |
| BciT130I | CCWGG | 1 cut(s) | 689 |
| BcnI | CCSGG | 1 cut(s) | 462 |
| BcoDI | GTCTC | 3 cut(s) | 312, 891, 1134 |
| BcuI | ACTAGT | 1 cut(s) | 866 |
| BfaI | CTAG | 3 cut(s) | 251, 428, 867 |
| BfmI | CTRYAG | 2 cut(s) | 583, 1156 |
| BfrI | CTTAAG | 1 cut(s) | 1135 |
| BfuAI | ACCTGC | 1 cut(s) | 994 |
| BisI | GCNGC | 4 cut(s) | 22, 25, 196, 327 |
| BlsI | GCNGC | 4 cut(s) | 23, 26, 197, 328 |
| BmcAI | AGTACT | 1 cut(s) | 1154 |
| Bme1390I | CCNGG | 2 cut(s) | 462, 689 |
| BmeT110I | CYCGRG | 1 cut(s) | 984 |
| BmgT120I | GGNCC | 2 cut(s) | 171, 193 |
| BmiI | GGNNCC | 1 cut(s) | 686 |
| BmrFI | CCNGG | 2 cut(s) | 462, 689 |
| BmsI | GCATC | 4 cut(s) | 135, 910, 999, 1167 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 137, 169 |
| BpmI | CTGGAG | 2 cut(s) | 68, 265 |
| Bpu10I | CCTNAGC | 1 cut(s) | 210 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| BpuMI | CCSGG | 1 cut(s) | 462 |
| Bsa29I | ATCGAT | 1 cut(s) | 993 |
| BsaHI | GRCGYC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 121 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 263, 293, 429, 459 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse1I | ACTGG | 4 cut(s) | 15, 232, 354, 848 |
| Bse3DI | GCAATG | 2 cut(s) | 360, 894 |
| BseBI | CCWGG | 1 cut(s) | 689 |
| BseCI | ATCGAT | 1 cut(s) | 993 |
| BseDI | CCNNGG | 1 cut(s) | 121 |
| BseGI | GGATG | 2 cut(s) | 70, 159 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMI | GCAATG | 2 cut(s) | 360, 894 |
| BseMII | CTCAG | 2 cut(s) | 224, 920 |
| BseNI | ACTGG | 4 cut(s) | 15, 232, 354, 848 |
| BseRI | GAGGAG | 2 cut(s) | 107, 268 |
| BseXI | GCAGC | 1 cut(s) | 313 |
| BsgI | GTGCAG | 1 cut(s) | 312 |
| Bsh1236I | CGCG | 2 cut(s) | 198, 626 |
| BshFI | GGCC | 2 cut(s) | 173, 195 |
| BshVI | ATCGAT | 1 cut(s) | 993 |
| BsiHKAI | GWGCWC | 1 cut(s) | 117 |
| BsiHKCI | CYCGRG | 1 cut(s) | 984 |
| BsiSI | CCGG | 1 cut(s) | 462 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsmAI | GTCTC | 3 cut(s) | 312, 891, 1134 |
| BsmI | GAATGC | 1 cut(s) | 382 |
| BsnI | GGCC | 2 cut(s) | 173, 195 |
| BsoBI | CYCGRG | 1 cut(s) | 984 |
| Bsp1286I | GDGCHC | 2 cut(s) | 117, 985 |
| Bsp143I | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| BspACI | CCGC | 5 cut(s) | 21, 24, 156, 196, 624 |
| BspANI | GGCC | 2 cut(s) | 173, 195 |
| BspCNI | CTCAG | 2 cut(s) | 223, 919 |
| BspDI | ATCGAT | 1 cut(s) | 993 |
| BspFNI | CGCG | 2 cut(s) | 198, 626 |
| BspHI | TCATGA | 2 cut(s) | 81, 666 |
| BspLI | GGNNCC | 1 cut(s) | 686 |
| BspMI | ACCTGC | 1 cut(s) | 994 |
| BspPI | GGATC | 4 cut(s) | 668, 679, 692, 1139 |
| BspTI | CTTAAG | 1 cut(s) | 1135 |
| BsrDI | GCAATG | 2 cut(s) | 360, 894 |
| BsrI | ACTGG | 4 cut(s) | 15, 232, 354, 848 |
| BssECI | CCNNGG | 1 cut(s) | 121 |
| BssMI | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| BssNI | GRCGYC | 1 cut(s) | 201 |
| BssSI | CACGAG | 1 cut(s) | 954 |
| Bst2BI | CACGAG | 1 cut(s) | 954 |
| Bst2UI | CCWGG | 1 cut(s) | 689 |
| Bst4CI | ACNGT | 3 cut(s) | 268, 1152, 1160 |
| BstACI | GRCGYC | 1 cut(s) | 201 |
| BstAFI | CTTAAG | 1 cut(s) | 1135 |
| BstDEI | CTNAG | 2 cut(s) | 210, 906 |
| BstF5I | GGATG | 2 cut(s) | 70, 159 |
| BstFNI | CGCG | 2 cut(s) | 198, 626 |
| BstHHI | GCGC | 1 cut(s) | 382 |
| BstKTI | GATC | 9 cut(s) | 81, 94, 621, 676, 687, 781, 801, 1030, 1134 |
| BstMAI | GTCTC | 3 cut(s) | 312, 891, 1134 |
| BstMBI | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 396, 884, 1009 |
| BstNI | CCWGG | 1 cut(s) | 689 |
| BstNSI | RCATGY | 1 cut(s) | 904 |
| BstSCI | CCNGG | 2 cut(s) | 460, 687 |
| BstSFI | CTRYAG | 2 cut(s) | 583, 1156 |
| BstUI | CGCG | 2 cut(s) | 198, 626 |
| BstV1I | GCAGC | 1 cut(s) | 313 |
| BstX2I | RGATCY | 2 cut(s) | 684, 1131 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1189 |
| BstYI | RGATCY | 2 cut(s) | 684, 1131 |
| Bsu15I | ATCGAT | 1 cut(s) | 993 |
| BsuRI | GGCC | 2 cut(s) | 173, 195 |
| BsuTUI | ATCGAT | 1 cut(s) | 993 |
| BtsCI | GGATG | 2 cut(s) | 70, 159 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| BveI | ACCTGC | 1 cut(s) | 994 |
| CciI | TCATGA | 2 cut(s) | 81, 666 |
| CfoI | GCGC | 1 cut(s) | 382 |
| Cfr13I | GGNCC | 2 cut(s) | 171, 193 |
| ClaI | ATCGAT | 1 cut(s) | 993 |
| CseI | GACGC | 1 cut(s) | 637 |
| Csp6I | GTAC | 2 cut(s) | 1153, 1161 |
| CviAII | CATG | 9 cut(s) | 82, 241, 367, 473, 478, 667, 893, 901, 1183 |
| CviQI | GTAC | 2 cut(s) | 1153, 1161 |
| DdeI | CTNAG | 2 cut(s) | 210, 906 |
| DpnI | GATC | 9 cut(s) | 80, 93, 620, 675, 686, 780, 800, 1029, 1133 |
| DpnII | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| EciI | GGCGGA | 1 cut(s) | 145 |
| Ecl136II | GAGCTC | 1 cut(s) | 115 |
| Eco24I | GRGCYC | 2 cut(s) | 117, 985 |
| Eco32I | GATATC | 2 cut(s) | 418, 1126 |
| Eco53kI | GAGCTC | 1 cut(s) | 115 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 984 |
| EcoICRI | GAGCTC | 1 cut(s) | 115 |
| EcoRII | CCWGG | 1 cut(s) | 687 |
| EcoRV | GATATC | 2 cut(s) | 418, 1126 |
| EcoT22I | ATGCAT | 1 cut(s) | 894 |
| EcoT38I | GRGCYC | 2 cut(s) | 117, 985 |
| FaeI | CATG | 9 cut(s) | 85, 244, 370, 476, 481, 670, 896, 904, 1186 |
| FatI | CATG | 9 cut(s) | 81, 240, 366, 472, 477, 666, 892, 900, 1182 |
| FblI | GTMKAC | 3 cut(s) | 270, 496, 582 |
| Fnu4HI | GCNGC | 4 cut(s) | 22, 25, 196, 327 |
| FokI | GGATG | 2 cut(s) | 77, 146 |
| FriOI | GRGCYC | 2 cut(s) | 117, 985 |
| Fsp4HI | GCNGC | 4 cut(s) | 22, 25, 196, 327 |
| FspBI | CTAG | 3 cut(s) | 251, 428, 867 |
| GlaI | GCGC | 1 cut(s) | 381 |
| GluI | GCNGC | 4 cut(s) | 22, 25, 196, 327 |
| GsuI | CTGGAG | 2 cut(s) | 68, 265 |
| HaeIII | GGCC | 2 cut(s) | 173, 195 |
| HapII | CCGG | 1 cut(s) | 462 |
| HgaI | GACGC | 1 cut(s) | 637 |
| HhaI | GCGC | 1 cut(s) | 382 |
| Hin1I | GRCGYC | 1 cut(s) | 201 |
| Hin1II | CATG | 9 cut(s) | 85, 244, 370, 476, 481, 670, 896, 904, 1186 |
| Hin6I | GCGC | 1 cut(s) | 380 |
| HinP1I | GCGC | 1 cut(s) | 380 |
| HincII | GTYRAC | 1 cut(s) | 271 |
| HindII | GTYRAC | 1 cut(s) | 271 |
| HinfI | GANTC | 5 cut(s) | 468, 481, 533, 720, 957 |
| HpaII | CCGG | 1 cut(s) | 462 |
| HphI | GGTGA | 1 cut(s) | 422 |
| Hpy166II | GTNNAC | 4 cut(s) | 271, 497, 583, 841 |
| Hpy188I | TCNGA | 9 cut(s) | 64, 96, 122, 179, 422, 486, 538, 909, 942 |
| Hpy8I | GTNNAC | 4 cut(s) | 271, 497, 583, 841 |
| Hpy99I | CGWCG | 4 cut(s) | 64, 203, 272, 631 |
| HpyAV | CCTTC | 3 cut(s) | 31, 904, 925 |
| HpyCH4III | ACNGT | 3 cut(s) | 268, 1152, 1160 |
| HpyCH4IV | ACGT | 2 cut(s) | 201, 697 |
| HpyCH4V | TGCA | 7 cut(s) | 329, 390, 649, 740, 822, 887, 892 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 396, 884, 1009 |
| HpyF3I | CTNAG | 2 cut(s) | 210, 906 |
| HpySE526I | ACGT | 2 cut(s) | 201, 697 |
| Hsp92I | GRCGYC | 1 cut(s) | 201 |
| Hsp92II | CATG | 9 cut(s) | 85, 244, 370, 476, 481, 670, 896, 904, 1186 |
| HspAI | GCGC | 1 cut(s) | 380 |
| Kzo9I | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| LmnI | GCTCC | 2 cut(s) | 120, 636 |
| Lsp1109I | GCAGC | 1 cut(s) | 313 |
| LweI | GCATC | 4 cut(s) | 135, 910, 999, 1167 |
| MaeI | CTAG | 3 cut(s) | 251, 428, 867 |
| MaeII | ACGT | 2 cut(s) | 201, 697 |
| MaeIII | GTNAC | 2 cut(s) | 698, 869 |
| MalI | GATC | 9 cut(s) | 80, 93, 620, 675, 686, 780, 800, 1029, 1133 |
| MboI | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| MboII | GAAGA | 3 cut(s) | 577, 764, 1022 |
| MflI | RGATCY | 2 cut(s) | 684, 1131 |
| MhlI | GDGCHC | 2 cut(s) | 117, 985 |
| MluCI | AATT | 6 cut(s) | 320, 522, 570, 642, 662, 728 |
| MlyI | GAGTC | 2 cut(s) | 477, 966 |
| MmeI | TCCRAC | 2 cut(s) | 42, 335 |
| Mph1103I | ATGCAT | 1 cut(s) | 894 |
| MseI | TTAA | 2 cut(s) | 693, 1136 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1187 |
| MspCI | CTTAAG | 1 cut(s) | 1135 |
| MspI | CCGG | 1 cut(s) | 462 |
| MspR9I | CCNGG | 2 cut(s) | 462, 689 |
| Mva1269I | GAATGC | 1 cut(s) | 382 |
| MvaI | CCWGG | 1 cut(s) | 689 |
| MvnI | CGCG | 2 cut(s) | 198, 626 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 396, 884, 1009 |
| NciI | CCSGG | 1 cut(s) | 462 |
| NdeII | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| NlaIII | CATG | 9 cut(s) | 85, 244, 370, 476, 481, 670, 896, 904, 1186 |
| NlaIV | GGNNCC | 1 cut(s) | 686 |
| NmuCI | GTSAC | 1 cut(s) | 698 |
| NsiI | ATGCAT | 1 cut(s) | 894 |
| NspI | RCATGY | 1 cut(s) | 904 |
| PagI | TCATGA | 2 cut(s) | 81, 666 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 195, 1075, 1084 |
| PctI | GAATGC | 1 cut(s) | 382 |
| PfeI | GAWTC | 3 cut(s) | 481, 533, 720 |
| PkrI | GCNGC | 4 cut(s) | 23, 26, 197, 328 |
| PleI | GAGTC | 2 cut(s) | 476, 965 |
| PpsI | GAGTC | 2 cut(s) | 476, 965 |
| Psp124BI | GAGCTC | 1 cut(s) | 117 |
| Psp6I | CCWGG | 1 cut(s) | 687 |
| PspGI | CCWGG | 1 cut(s) | 687 |
| PspN4I | GGNNCC | 1 cut(s) | 686 |
| PspPI | GGNCC | 2 cut(s) | 171, 193 |
| PsuI | RGATCY | 2 cut(s) | 684, 1131 |
| RsaI | GTAC | 2 cut(s) | 1154, 1162 |
| RsaNI | GTAC | 2 cut(s) | 1153, 1161 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1187 |
| SacI | GAGCTC | 1 cut(s) | 117 |
| SalI | GTCGAC | 1 cut(s) | 269 |
| SaqAI | TTAA | 2 cut(s) | 693, 1136 |
| SatI | GCNGC | 4 cut(s) | 22, 25, 196, 327 |
| Sau3AI | GATC | 9 cut(s) | 78, 91, 618, 673, 684, 778, 798, 1027, 1131 |
| Sau96I | GGNCC | 2 cut(s) | 171, 193 |
| ScaI | AGTACT | 1 cut(s) | 1154 |
| SchI | GAGTC | 2 cut(s) | 477, 966 |
| ScrFI | CCNGG | 2 cut(s) | 462, 689 |
| SduI | GDGCHC | 2 cut(s) | 117, 985 |
| SfaNI | GCATC | 4 cut(s) | 135, 910, 999, 1167 |
| SfcI | CTRYAG | 2 cut(s) | 583, 1156 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1187 |
| SmlI | CTYRAG | 2 cut(s) | 104, 1135 |
| SmoI | CTYRAG | 2 cut(s) | 104, 1135 |
| SpeI | ACTAGT | 1 cut(s) | 866 |
| Sse9I | AATT | 6 cut(s) | 320, 522, 570, 642, 662, 728 |
| SsiI | CCGC | 5 cut(s) | 21, 24, 156, 196, 624 |
| SspMI | CTAG | 3 cut(s) | 251, 428, 867 |
| SstI | GAGCTC | 1 cut(s) | 117 |
| StyD4I | CCNGG | 2 cut(s) | 460, 687 |
| TaaI | ACNGT | 3 cut(s) | 268, 1152, 1160 |
| TaiI | ACGT | 2 cut(s) | 204, 700 |
| TaqI | TCGA | 8 cut(s) | 90, 144, 189, 270, 505, 993, 1042, 1078 |
| TaqII | GACCGA | 1 cut(s) | 686 |
| TasI | AATT | 6 cut(s) | 320, 522, 570, 642, 662, 728 |
| TatI | WGTACW | 1 cut(s) | 1152 |
| TauI | GCSGC | 3 cut(s) | 24, 27, 198 |
| TfiI | GAWTC | 3 cut(s) | 481, 533, 720 |
| Tru1I | TTAA | 2 cut(s) | 693, 1136 |
| Tru9I | TTAA | 2 cut(s) | 693, 1136 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TseFI | GTSAC | 1 cut(s) | 698 |
| TseI | GCWGC | 1 cut(s) | 326 |
| Tsp45I | GTSAC | 1 cut(s) | 698 |
| TspDTI | ATGAA | 6 cut(s) | 17, 113, 546, 654, 655, 944 |
| TspGWI | ACGGA | 1 cut(s) | 450 |
| TspRI | CASTG | 1 cut(s) | 232 |
| Vha464I | CTTAAG | 1 cut(s) | 1135 |
| XapI | RAATTY | 3 cut(s) | 570, 642, 662 |
| XceI | RCATGY | 1 cut(s) | 904 |
| XmiI | GTMKAC | 3 cut(s) | 270, 496, 582 |
| XspI | CTAG | 3 cut(s) | 251, 428, 867 |
| ZraI | GACGTC | 1 cut(s) | 202 |
| ZrmI | AGTACT | 1 cut(s) | 1154 |
| Zsp2I | ATGCAT | 1 cut(s) | 894 |