Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013078.1

Orthogroup ID

OG0000818

Physical Location & Seq

Genomic Coordinates Reverse (-)

79277 .. 82616

Gene Structure 3340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013078.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

atggcagcaatagcaaccgcgagagcgagcgtggttccgatgaaccgactggttcagggcggcggcaaggtgttgaaggagaagctggagtttgtgccgtcggatgatatagagccgatcatgagcttcgatcagatgaacctcaaggacgagctcctccgaggcatctacaactacggcttcgagaagccctccgccatccagcaaagggccataagacccataatcgagggccgcgacgtcatagctcaggctcaatctggcactggaaagacctccatgattgccctagcttcttgccaaaccgtcgacacctcctccagagaggttcaggtgttgatattgtctccaacgagggaattggctgcacagacagagaaagtgatactggcaatgggaaactacatgagtattcaagcgcattcctgcattggaggcaaaagcgtgggtgaggatatcagaaagctagagaacggagttcaagtggtgtctggaactcccggtagagtccatgacatgattcagaggggaagtctacgcactcgacacatcaaactactaattcttgatgaatctgatgagatgttgagcagaggcttcaagaagaaaatttacgaagtctacagacatctacaagataccctacaagtttgcttgatctccgcgacgctccctaatgaaattttggagatgaccaacaaattcatgaccgatcctataaggatcctggttaaacgtgacgagctgactttggagggaatcaagcaatttttcgttgcagttgaaaaagaagattggaagtttgatactctgtgcgatctctatgatacccttacgatcacacaagctgttattttctgcaacacaaggcgaaaagtggactggcttactgaaaagatgcggactggtaacttttctgtgtctgcaatgcatggagacatgcctcagaaggagagagatgctattatgaaggagtttcagaaaggtctttcacgagtcctcatcacaactgatgtttgggctcggggcatcgatgttcagcaggtttcgctggttatcaactacgatcttccaaataatcgagagctatacatacataggattggtcgttcgggtcgatttggacgaaagggtgtggcaataaactttgtcaagaaagatgatatcaggatcttaagagacattgaacagtgcgtatcaaagccttggcgttctctaatctccaacaccaagttcattgcactgcacgccaagaaaaccctcgaggataaagaggtattctttcggagacgaagagtcatatttaaagtggcactacattacctttactctttggacctagaccagttcctcaaccataactataacgatgatgatgacaatgcactggttcttaagaatcgccatgttcatgcagataataatcatgatggtttgataccagccaccgagctcgattttgtttctgcagaaggacatagacccatatacttcatctactccagcaataacttgttgttgtgcgatatgaggcgtgggttttatttggttaaccctgcaaccagggagatgaagaaagtaccaaagccactatcatggagacctgtgaggcccttttgcttgagcttatgtggatttggatttgattcctcccccaatgagtacaaggtggttaacgggcaggtctattctgatatcaatgtaatcgtatttagtgtctatacactgaaaactgattcttggcgaaagatcgagtgcttctctccctaccatgcttattggtttcaggggatttttctgaatggagctattcattggtcagcaacgacagttggagatcgatcctcttcggtgattgtattagcagaggaggaggttcgcgaaattcgactcccacccatcggtgatacttgtttagcaaacctgggagtgtttagagattgcctatgtataacgctcgctggtattgatcaaacattcaatgagttttgggtcatgaaagaatatggggtgagcgagtcttggactagaatgagggtctccatgccatatcaccaattgtcacattttggtttctctacaaaatctcatgatttgatggtgtgtggaagttcatttgttatgtactacttcaaagaagaaagttttaggaaccttccaattcgtgataccaccttaggaggtaatggcgttggggtttatgttgagggactttttccactaatcgatcgagagcaggacaagagccgtagagtagataatcaagtattgattaagctcaagcatgcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009628 GO:0009987 GO:0010467 GO:0010468 GO:0010501 GO:0016020 GO:0016070 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035145 GO:0036293 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050896 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070482 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03040 map03013 map03015 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

763

Amino Acids

87.26

Weight (kDa)

8.55

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51380 AT1G51380 AT1G51380 AT1G51380 AT3G19760
fragaria_vesca	FvH4_4g36800 FvH4_4g36800 FvH4_4g36800 FvH4_6g49811 FvH4_6g49900
malus_domestica	MD09G1053900.v1.1 MD09G1189300.v1.1 MD09G1268200.v1.1 MD09G1268600.v1.1 MD09G1268800.v1.1 MD13G1006800.v1.1 MD15G1056500.v1.1 MD16G1001000.v1.1
prunus_persica	Prupe.1G346100_v2.0.a1 Prupe.3G165200_v2.0.a1
pyrus_communis	pycom111g04510 pycom16g00440
rosa_chinensis	RchiOBHm_Chr0c44g0503461 RchiOBHm_Chr0c44g0503501 RchiOBHm_Chr0c44g0503531 RchiOBHm_Chr0c44g0503561 RchiOBHm_Chr0c44g0503691 RchiOBHm_Chr0c44g0503701 RchiOBHm_Chr0c44g0503721 RchiOBHm_Chr0c44g0503751 RchiOBHm_Chr2g0169961 RchiOBHm_Chr4g0386061 RchiOBHm_Chr4g0386101 RchiOBHm_Chr4g0386151 RchiOBHm_Chr4g0386181 RchiOBHm_Chr4g0386221 RchiOBHm_Chr4g0386241 RchiOBHm_Chr4g0386301 RchiOBHm_Chr4g0386341 RchiOBHm_Chr4g0386361 RchiOBHm_Chr4g0446531
rosa_laevigata	RLG00000005651 RLG00000010170 RLG00000010175 RLG00000021914
rosa_multiflora	Rmu_sc0005526.1_g000001 Rmu_sc0005795.1_g000003 Rmu_sc0013078.1_g000019 Rmu_sc0022031.1_g000001 Rmu_ssc0000389.1_g000007
rosa_roxburghii	Rroxscaffold_5G00333840 Rroxscaffold_5G00386950
rosa_rugosa	Rorug02G0544700 Rorug02G0545100 Rorug04G0372300
rosa_samantha	Rh2AG617000 Rh2AG617300 Rh2CG597900 Rh2DG639700 Rh2DG640100 Rh2DG640400 Rh4AG010700 Rh4AG433900 Rh4BG007600 Rh4BG443100 Rh4DG441700
rosa_wichuraiana	Rw2G051090 Rw4G037080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	243
AbsI	CCTCGAGG	1 cut(s)	1262
Acc36I	ACCTGC	2 cut(s)	1033, 1672
AccI	GTMKAC	3 cut(s)	309, 535, 621
AccII	CGCG	4 cut(s)	20, 237, 665, 1881
AciI	CCGC	7 cut(s)	18, 60, 63, 195, 235, 663, 901
AclWI	GGATC	5 cut(s)	707, 718, 731, 1178, 1836
AcsI	RAATTY	4 cut(s)	609, 681, 701, 1884
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	3 cut(s)	1581, 1664, 2126
AfiI	CCNNNNNNNGG	2 cut(s)	208, 1901
AflII	CTTAAG	2 cut(s)	1174, 1394
AgsI	TTSAA	8 cut(s)	76, 416, 482, 601, 785, 1187, 1981, 2134
AhdI	GACNNNNNGTC	1 cut(s)	1295
AjnI	CCWGG	3 cut(s)	726, 1562, 1923
AjuI	GAANNNNNNNTTGG	2 cut(s)	1217, 1249
AloI	GAACNNNNNNTCC	2 cut(s)	1093, 1125
Alw21I	GWGCWC	2 cut(s)	156, 1455
Alw26I	GTCTC	6 cut(s)	351, 930, 1173, 1282, 1594, 2044
AlwI	GGATC	5 cut(s)	707, 718, 731, 1178, 1836
Ama87I	CYCGRG	2 cut(s)	1023, 1262
AoxI	GGCC	3 cut(s)	210, 232, 1610
ApeKI	GCWGC	2 cut(s)	5, 365
ApoI	RAATTY	4 cut(s)	609, 681, 701, 1884
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	4 cut(s)	210, 232, 1336, 1611
AsuC2I	CCSGG	1 cut(s)	501
AsuHPI	GGTGA	5 cut(s)	461, 1864, 1916, 2023, 2045
AvaI	CYCGRG	2 cut(s)	1023, 1262
AvaII	GGWCC	1 cut(s)	1336
AxyI	CCTNAGG	1 cut(s)	2176
BamHI	GGATCC	1 cut(s)	723
BanII	GRGCYC	3 cut(s)	156, 1024, 1455
BarI	GAAGNNNNNNTAC	2 cut(s)	596, 628
BauI	CACGAG	1 cut(s)	993
Bbv12I	GWGCWC	2 cut(s)	156, 1455
BbvI	GCAGC	2 cut(s)	17, 352
BccI	CCATC	4 cut(s)	206, 1424, 1907, 2092
BceAI	ACGGC	3 cut(s)	82, 193, 2232
BciT130I	CCWGG	3 cut(s)	728, 1564, 1925
BclI	TGATCA	1 cut(s)	1969
BcnI	CCSGG	1 cut(s)	501
BcoDI	GTCTC	6 cut(s)	351, 930, 1173, 1282, 1594, 2044
BfaI	CTAG	4 cut(s)	290, 467, 1340, 2028
BfmI	CTRYAG	2 cut(s)	622, 1467
BfrI	CTTAAG	2 cut(s)	1174, 1394
BfuAI	ACCTGC	2 cut(s)	1033, 1672
BisI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
BlsI	GCNGC	5 cut(s)	7, 62, 65, 236, 367
Bme1390I	CCNGG	4 cut(s)	501, 728, 1564, 1925
Bme18I	GGWCC	1 cut(s)	1336
BmeRI	GACNNNNNGTC	1 cut(s)	1295
BmeT110I	CYCGRG	2 cut(s)	1023, 1262
BmgT120I	GGNCC	4 cut(s)	210, 232, 1336, 1611
BmiI	GGNNCC	3 cut(s)	36, 725, 2153
BmrFI	CCNGG	4 cut(s)	501, 728, 1564, 1925
BmsI	GCATC	4 cut(s)	174, 888, 949, 1038
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 1745, 1777
BpmI	CTGGAG	3 cut(s)	107, 304, 1486
Bpu10I	CCTNAGC	1 cut(s)	249
BpuEI	CTTGAG	3 cut(s)	128, 1642, 2264
BpuMI	CCSGG	1 cut(s)	501
Bsa29I	ATCGAT	3 cut(s)	1032, 1840, 2226
BsaBI	GATNNNNATC	1 cut(s)	1422
BsaHI	GRCGYC	1 cut(s)	240
BsaI	GGTCTC	2 cut(s)	1594, 2044
BsaJI	CCNNGG	4 cut(s)	160, 1205, 1563, 1924
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 468, 498
Bsc4I	CCNNNNNNNGG	2 cut(s)	208, 1901
Bse1I	ACTGG	7 cut(s)	54, 271, 393, 887, 910, 1345, 1392
Bse21I	CCTNAGG	1 cut(s)	2176
Bse3DI	GCAATG	3 cut(s)	399, 933, 1236
Bse8I	GATNNNNATC	1 cut(s)	1422
BseBI	CCWGG	3 cut(s)	728, 1564, 1925
BseCI	ATCGAT	3 cut(s)	1032, 1840, 2226
BseDI	CCNNGG	4 cut(s)	160, 1205, 1563, 1924
BseGI	GGATG	2 cut(s)	109, 198
BseJI	GATNNNNATC	1 cut(s)	1422
BseLI	CCNNNNNNNGG	2 cut(s)	208, 1901
BseMI	GCAATG	3 cut(s)	399, 933, 1236
BseMII	CTCAG	2 cut(s)	263, 959
BseNI	ACTGG	7 cut(s)	54, 271, 393, 887, 910, 1345, 1392
BseRI	GAGGAG	4 cut(s)	146, 307, 1883, 1886
BseXI	GCAGC	2 cut(s)	17, 352
BsgI	GTGCAG	2 cut(s)	351, 1229
Bsh1236I	CGCG	4 cut(s)	20, 237, 665, 1881
Bsh1285I	CGRYCG	1 cut(s)	2230
BshFI	GGCC	3 cut(s)	212, 234, 1612
BshVI	ATCGAT	3 cut(s)	1032, 1840, 2226
BsiEI	CGRYCG	1 cut(s)	2230
BsiHKAI	GWGCWC	2 cut(s)	156, 1455
BsiHKCI	CYCGRG	2 cut(s)	1023, 1262
BsiSI	CCGG	1 cut(s)	501
BslFI	GGGAC	1 cut(s)	2223
BslI	CCNNNNNNNGG	2 cut(s)	208, 1901
BsmAI	GTCTC	6 cut(s)	351, 930, 1173, 1282, 1594, 2044
BsmBI	CGTCTC	1 cut(s)	1282
BsmFI	GGGAC	1 cut(s)	2223
BsmI	GAATGC	1 cut(s)	421
BsnI	GGCC	3 cut(s)	212, 234, 1612
Bso31I	GGTCTC	2 cut(s)	1594, 2044
BsoBI	CYCGRG	2 cut(s)	1023, 1262
Bsp1286I	GDGCHC	3 cut(s)	156, 1024, 1455
Bsp68I	TCGCGA	1 cut(s)	1881
BspACI	CCGC	7 cut(s)	18, 60, 63, 195, 235, 663, 901
BspANI	GGCC	3 cut(s)	212, 234, 1612
BspCNI	CTCAG	2 cut(s)	262, 958
BspDI	ATCGAT	3 cut(s)	1032, 1840, 2226
BspFNI	CGCG	4 cut(s)	20, 237, 665, 1881
BspHI	TCATGA	5 cut(s)	120, 705, 1426, 1995, 2089
BspLI	GGNNCC	3 cut(s)	36, 725, 2153
BspMAI	CTGCAG	1 cut(s)	1471
BspMI	ACCTGC	2 cut(s)	1033, 1672
BspPI	GGATC	5 cut(s)	707, 718, 731, 1178, 1836
BspTI	CTTAAG	2 cut(s)	1174, 1394
BspTNI	GGTCTC	2 cut(s)	1594, 2044
BsrDI	GCAATG	3 cut(s)	399, 933, 1236
BsrI	ACTGG	7 cut(s)	54, 271, 393, 887, 910, 1345, 1392
BssECI	CCNNGG	4 cut(s)	160, 1205, 1563, 1924
BssNI	GRCGYC	1 cut(s)	240
BssSI	CACGAG	1 cut(s)	993
BssT1I	CCWWGG	1 cut(s)	1205
Bst2BI	CACGAG	1 cut(s)	993
Bst2UI	CCWGG	3 cut(s)	728, 1564, 1925
Bst4CI	ACNGT	3 cut(s)	307, 1191, 1831
Bst6I	CTCTTC	2 cut(s)	1288, 1852
BstACI	GRCGYC	1 cut(s)	240
BstAFI	CTTAAG	2 cut(s)	1174, 1394
BstC8I	GCNNGC	4 cut(s)	28, 1248, 1959, 2286
BstDEI	CTNAG	3 cut(s)	249, 945, 2176
BstF5I	GGATG	2 cut(s)	109, 198
BstFNI	CGCG	4 cut(s)	20, 237, 665, 1881
BstHHI	GCGC	1 cut(s)	421
BstMAI	GTCTC	6 cut(s)	351, 930, 1173, 1282, 1594, 2044
BstMCI	CGRYCG	1 cut(s)	2230
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 435, 1048, 1247
BstNI	CCWGG	3 cut(s)	728, 1564, 1925
BstNSI	RCATGY	2 cut(s)	943, 2288
BstSCI	CCNGG	4 cut(s)	499, 726, 1562, 1923
BstSFI	CTRYAG	2 cut(s)	622, 1467
BstUI	CGCG	4 cut(s)	20, 237, 665, 1881
BstV1I	GCAGC	2 cut(s)	17, 352
BstX2I	RGATCY	2 cut(s)	723, 1170
BstXI	CCANNNNNNTGG	1 cut(s)	1596
BstYI	RGATCY	2 cut(s)	723, 1170
Bsu15I	ATCGAT	3 cut(s)	1032, 1840, 2226
Bsu36I	CCTNAGG	1 cut(s)	2176
BsuRI	GGCC	3 cut(s)	212, 234, 1612
BsuTUI	ATCGAT	3 cut(s)	1032, 1840, 2226
BtsCI	GGATG	2 cut(s)	109, 198
BtsI	GCAGTG	1 cut(s)	1241
BtsIMutI	CAGTG	5 cut(s)	264, 1196, 1241, 1385, 1724
BtuMI	TCGCGA	1 cut(s)	1881
BveI	ACCTGC	2 cut(s)	1033, 1672
Cac8I	GCNNGC	4 cut(s)	28, 1248, 1959, 2286
CciI	TCATGA	5 cut(s)	120, 705, 1426, 1995, 2089
CfoI	GCGC	1 cut(s)	421
Cfr13I	GGNCC	4 cut(s)	210, 232, 1336, 1611
ClaI	ATCGAT	3 cut(s)	1032, 1840, 2226
CseI	GACGC	1 cut(s)	676
Csp6I	GTAC	3 cut(s)	1580, 1663, 2125
CviQI	GTAC	3 cut(s)	1580, 1663, 2125
DdeI	CTNAG	3 cut(s)	249, 945, 2176
DraI	TTTAAA	1 cut(s)	1306
DriI	GACNNNNNGTC	1 cut(s)	1295
Eam1104I	CTCTTC	2 cut(s)	1288, 1852
Eam1105I	GACNNNNNGTC	1 cut(s)	1295
EarI	CTCTTC	2 cut(s)	1288, 1852
EciI	GGCGGA	1 cut(s)	184
Ecl136II	GAGCTC	2 cut(s)	154, 1453
Eco130I	CCWWGG	1 cut(s)	1205
Eco24I	GRGCYC	3 cut(s)	156, 1024, 1455
Eco31I	GGTCTC	2 cut(s)	1594, 2044
Eco32I	GATATC	3 cut(s)	457, 1165, 1696
Eco47I	GGWCC	1 cut(s)	1336
Eco53kI	GAGCTC	2 cut(s)	154, 1453
Eco81I	CCTNAGG	1 cut(s)	2176
Eco88I	CYCGRG	2 cut(s)	1023, 1262
EcoICRI	GAGCTC	2 cut(s)	154, 1453
EcoO109I	RGGNCCY	1 cut(s)	1611
EcoRII	CCWGG	3 cut(s)	726, 1562, 1923
EcoRV	GATATC	3 cut(s)	457, 1165, 1696
EcoT14I	CCWWGG	1 cut(s)	1205
EcoT22I	ATGCAT	2 cut(s)	933, 2290
EcoT38I	GRGCYC	3 cut(s)	156, 1024, 1455
ErhI	CCWWGG	1 cut(s)	1205
Esp3I	CGTCTC	1 cut(s)	1282
FaqI	GGGAC	1 cut(s)	2223
FbaI	TGATCA	1 cut(s)	1969
FblI	GTMKAC	3 cut(s)	309, 535, 621
Fnu4HI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
FokI	GGATG	2 cut(s)	116, 185
FriOI	GRGCYC	3 cut(s)	156, 1024, 1455
Fsp4HI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
FspBI	CTAG	4 cut(s)	290, 467, 1340, 2028
GlaI	GCGC	1 cut(s)	420
GluI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
GsuI	CTGGAG	3 cut(s)	107, 304, 1486
HaeIII	GGCC	3 cut(s)	212, 234, 1612
HapII	CCGG	1 cut(s)	501
HgaI	GACGC	1 cut(s)	676
HhaI	GCGC	1 cut(s)	421
Hin1I	GRCGYC	1 cut(s)	240
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HincII	GTYRAC	3 cut(s)	310, 1552, 1675
HindII	GTYRAC	3 cut(s)	310, 1552, 1675
HpaI	GTTAAC	2 cut(s)	1552, 1675
HpaII	CCGG	1 cut(s)	501
HphI	GGTGA	5 cut(s)	461, 1864, 1916, 2023, 2045
Hpy166II	GTNNAC	6 cut(s)	310, 536, 622, 880, 1552, 1675
Hpy8I	GTNNAC	6 cut(s)	310, 536, 622, 880, 1552, 1675
Hpy99I	CGWCG	4 cut(s)	103, 242, 311, 670
HpyAV	CCTTC	5 cut(s)	70, 943, 964, 1466, 2165
HpyCH4III	ACNGT	3 cut(s)	307, 1191, 1831
HpyCH4IV	ACGT	2 cut(s)	240, 736
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 435, 1048, 1247
HpyF3I	CTNAG	3 cut(s)	249, 945, 2176
HpySE526I	ACGT	2 cut(s)	240, 736
Hsp92I	GRCGYC	1 cut(s)	240
HspAI	GCGC	1 cut(s)	419
Ksp22I	TGATCA	1 cut(s)	1969
KspAI	GTTAAC	2 cut(s)	1552, 1675
LmnI	GCTCC	3 cut(s)	159, 675, 1805
Lsp1109I	GCAGC	2 cut(s)	17, 352
LweI	GCATC	4 cut(s)	174, 888, 949, 1038
MaeI	CTAG	4 cut(s)	290, 467, 1340, 2028
MaeII	ACGT	2 cut(s)	240, 736
MaeIII	GTNAC	3 cut(s)	737, 908, 2061
MboII	GAAGA	7 cut(s)	616, 803, 1061, 1305, 1585, 1839, 2150
MfeI	CAATTG	1 cut(s)	2057
MflI	RGATCY	2 cut(s)	723, 1170
MhlI	GDGCHC	3 cut(s)	156, 1024, 1455
MluCI	AATT	9 cut(s)	359, 561, 609, 681, 701, 767, 1884, 2057, 2160
MlyI	GAGTC	5 cut(s)	516, 1005, 1305, 1884, 2027
MmeI	TCCRAC	4 cut(s)	81, 374, 1248, 1813
Mph1103I	ATGCAT	2 cut(s)	933, 2290
MseI	TTAA	7 cut(s)	732, 1175, 1305, 1395, 1551, 1674, 2274
MslI	CAYNNNNRTG	2 cut(s)	1410, 1594
MspCI	CTTAAG	2 cut(s)	1174, 1394
MspI	CCGG	1 cut(s)	501
MspR9I	CCNGG	4 cut(s)	501, 728, 1564, 1925
MunI	CAATTG	1 cut(s)	2057
Mva1269I	GAATGC	1 cut(s)	421
MvaI	CCWGG	3 cut(s)	728, 1564, 1925
MvnI	CGCG	4 cut(s)	20, 237, 665, 1881
MwoI	GCNNNNNNNGC	4 cut(s)	11, 435, 1048, 1247
NciI	CCSGG	1 cut(s)	501
NlaIV	GGNNCC	3 cut(s)	36, 725, 2153
NmuCI	GTSAC	2 cut(s)	737, 2061
NruI	TCGCGA	1 cut(s)	1881
NsiI	ATGCAT	2 cut(s)	933, 2290
NspI	RCATGY	2 cut(s)	943, 2288
PaeI	GCATGC	1 cut(s)	2288
PaeR7I	CTCGAG	1 cut(s)	1262
PagI	TCATGA	5 cut(s)	120, 705, 1426, 1995, 2089
PcsI	WCGNNNNNNNCGW	4 cut(s)	234, 1114, 1123, 1885
PctI	GAATGC	1 cut(s)	421
PfeI	GAWTC	6 cut(s)	520, 572, 759, 1399, 1646, 1736
PkrI	GCNGC	5 cut(s)	7, 62, 65, 236, 367
Ple19I	CGATCG	1 cut(s)	2230
PleI	GAGTC	5 cut(s)	515, 1004, 1304, 1884, 2026
PpsI	GAGTC	5 cut(s)	515, 1004, 1304, 1884, 2026
Psp124BI	GAGCTC	2 cut(s)	156, 1455
Psp6I	CCWGG	3 cut(s)	726, 1562, 1923
PspGI	CCWGG	3 cut(s)	726, 1562, 1923
PspN4I	GGNNCC	3 cut(s)	36, 725, 2153
PspPI	GGNCC	4 cut(s)	210, 232, 1336, 1611
PspXI	VCTCGAGB	1 cut(s)	1262
PstI	CTGCAG	1 cut(s)	1471
PsuI	RGATCY	2 cut(s)	723, 1170
PvuI	CGATCG	1 cut(s)	2230
RruI	TCGCGA	1 cut(s)	1881
RsaI	GTAC	3 cut(s)	1581, 1664, 2126
RsaNI	GTAC	3 cut(s)	1580, 1663, 2125
RseI	CAYNNNNRTG	2 cut(s)	1410, 1594
SacI	GAGCTC	2 cut(s)	156, 1455
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	7 cut(s)	732, 1175, 1305, 1395, 1551, 1674, 2274
SatI	GCNGC	5 cut(s)	6, 61, 64, 235, 366
Sau96I	GGNCC	4 cut(s)	210, 232, 1336, 1611
SchI	GAGTC	5 cut(s)	516, 1005, 1305, 1884, 2027
ScrFI	CCNGG	4 cut(s)	501, 728, 1564, 1925
SduI	GDGCHC	3 cut(s)	156, 1024, 1455
SfaNI	GCATC	4 cut(s)	174, 888, 949, 1038
SfcI	CTRYAG	2 cut(s)	622, 1467
Sfr274I	CTCGAG	1 cut(s)	1262
SinI	GGWCC	1 cut(s)	1336
SlaI	CTCGAG	1 cut(s)	1262
SmiMI	CAYNNNNRTG	2 cut(s)	1410, 1594
SmlI	CTYRAG	6 cut(s)	143, 1174, 1262, 1394, 1621, 2279
SmoI	CTYRAG	6 cut(s)	143, 1174, 1262, 1394, 1621, 2279
SphI	GCATGC	1 cut(s)	2288
Sse9I	AATT	9 cut(s)	359, 561, 609, 681, 701, 767, 1884, 2057, 2160
SsiI	CCGC	7 cut(s)	18, 60, 63, 195, 235, 663, 901
SspMI	CTAG	4 cut(s)	290, 467, 1340, 2028
SstI	GAGCTC	2 cut(s)	156, 1455
StyD4I	CCNGG	4 cut(s)	499, 726, 1562, 1923
StyI	CCWWGG	1 cut(s)	1205
TaaI	ACNGT	3 cut(s)	307, 1191, 1831
TaiI	ACGT	2 cut(s)	243, 739
TaqII	GACCGA	1 cut(s)	725
TasI	AATT	9 cut(s)	359, 561, 609, 681, 701, 767, 1884, 2057, 2160
TatI	WGTACW	2 cut(s)	1662, 2124
TauI	GCSGC	3 cut(s)	63, 66, 237
TfiI	GAWTC	6 cut(s)	520, 572, 759, 1399, 1646, 1736
Tru1I	TTAA	7 cut(s)	732, 1175, 1305, 1395, 1551, 1674, 2274
Tru9I	TTAA	7 cut(s)	732, 1175, 1305, 1395, 1551, 1674, 2274
TscAI	CASTG	5 cut(s)	271, 1196, 1248, 1392, 1731
TseFI	GTSAC	2 cut(s)	737, 2061
TseI	GCWGC	2 cut(s)	5, 365
Tsp45I	GTSAC	2 cut(s)	737, 2061
TspGWI	ACGGA	1 cut(s)	489
TspRI	CASTG	5 cut(s)	271, 1196, 1248, 1392, 1731
Vha464I	CTTAAG	2 cut(s)	1174, 1394
VpaK11BI	GGWCC	1 cut(s)	1336
XapI	RAATTY	4 cut(s)	609, 681, 701, 1884
XceI	RCATGY	2 cut(s)	943, 2288
XhoI	CTCGAG	1 cut(s)	1262
XmiI	GTMKAC	3 cut(s)	309, 535, 621
XspI	CTAG	4 cut(s)	290, 467, 1340, 2028
ZraI	GACGTC	1 cut(s)	241
Zsp2I	ATGCAT	2 cut(s)	933, 2290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.