Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001192

Physical Location & Seq

Genomic Coordinates Forward (+)

16388724 .. 16391582

Gene Structure 2859 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G44900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGAGTTTAATGGTGATAGGATCCCTTACCTGAGAGATACATGGAGAGATGCAAACATGATCTGCGGTATCTTGCCTATTAACCCGAGCTCGAGCGGGCTATGGCCCTCCCCGAAGCTCCCAGATCCTCAAGCAAACATTGAGTTCTGGAATTACATGTTTCCACATGTTCAGATCATTTTCCTTATCGTCACTATTCTCTGGCAATTCTTCCATTTCTTCCTCAGACGTCTCGGCATGATTCGTTTCACCTCCCATATGCTTACTGGGATTCTCTTGAGCAAGTCGTTTCTTAAGGAGAATACACCGGCTAGGAAATTCCTCTCGACGGAAGACTATAAAGAGACTCTGTTTGGTTTAGTGGGTGCATGTTCCTACATGATGTTTTGGTTCTTGATGGGAGTTAAAATGGACTTGAGTTTGATCCGCAGCACCGGGAGAAAAGCTGTAGCTATCGGTCTTTCCTCAGTGTTACTCTCTATAACGGTTTGCGCCTTGATCTTCTTCTTGATCCTAAGAGATGTAGGGACGAAAAAGGGAGAACCGGTTATGAGTTTCTTTGAAATCATTTTCATCTATTTGATCCAATGCCTTTCGTCGTTTCCTGTAATTGGAAACCTTCTTTTTGAGCTTAGGCTCCAGAATTCAGAGCTTGGCCGTCTCGCTATGTCTTCTGCAGTGATCAGTGACTTCAGCACCTCGATCCTCTCTGCGGTTCTAGTCTTTCTAAAGGAACTCAAGGACGATAAATCTCGGCTTGGATCAGTTTTTATCGGAGATGTTATTGTTGGAAACCGTCCTATGAAGCGTGCGGGCACAGTGGTCTTGTTTGTTTGTTTTGCCATATACATATTCAGACCATTAATGTTCTTCATTATCAAGAGAACACCTTCTGGTCGTCCCGTAAAGAAATTCTATATATATGCAATCATCATTCTTGTCTTTGGATCAGCCATTCTTGCCGATTGGTGCAAGCAATCTATTTTCATAGGACCTTTTATCTTAGGCTTAGCTGTTCCACACGGTCCACCTCTAGGCTCTGCAATACTTCAGAAGTTTGAGTCTGTGGTTTTCGGCACATTCCTTCCTTTCTTTGTGGCTACCTCCGCGGAAGAGATCGATACTTCGATTTTACAGTCTTGGATAGATCTCAAGAGTATTGTCATCCTAGTGTCTGTATCGTTTATTGTCAAATTCGCTCTCACGACTCTCCCTGCCTTCTTATACGGTATGCCAGCAAAGGATTGCATTGCTCTGTCTCTAATTATGTCATTCAAAGGCATTTTCGAGTTCGGTGCTTACGGTTATGCGTATCAAAGAGGGACTATTCGGCCGGTGACCTTTACGGTTTTATCTTTGTACATCTTGTTGAACTCTGCAGTCATACCTCCGCTCTTAAAACGCATTTATGATCCTTCGAGGATGTACGCAGGATACGAGAAGCGGAACATGCTTCACATGAAACCAAACTCCGAGCTCAGGATTCTATCGTGTATCTACAAAACAGACGATATCCGTCCGATGATCAATCTCCTTGAAGCTACTTGTCCCTCAAGAGAAAACCCTGTAGCTACTTACGTCCTTCACTTGATGGAGCTAGTAGGACAAGCCAATCCAGTCCTCATCTCTCACCGATTACAAACCCGTAAAAGTGAGAACATGTCTTATAATTCTGAAAACGTCGTTGTCTCATTCGAACAGTTCCACAACGATTTTTTCGGCTCTGTTTTCGTTAGCACTTACACGGCTTTATCCGTGCCGAAGATGATGCACGGAGACATCTGTATGCTGGCTTTAAACAACACAACGTCTCTCATCATCCTTCCTTTTCACCAGACTTGGTCTGCTGATGGATCAGCCATTGTTTCAGACAGCCTAATGATCCGGCAACTGAACAAGAGTGTCCTCGACCTCTCTCCTTGCTCTGTCGGAATCTTCGTCTATCGAAGCAGTAATGGACGGAGAACAATCAAAGAGACAGCTGCAAACTTCTCATCTTACCAAGTTTGTATGCTCTTTCTTGGAGGTAAAGACGATAGAGAAGCTTTATCACTCGCCAAGAGAATGGCTCGTGATTCAAGAATAACCATCACAGTGGTTTCACTCATCTCTTCCGAACAGAGAGCGAACCAAGCAACCGACTGGGATCGCATGCTCGACTTAGAACTACTCAGAGACGTGAAAAGCAACGTTCTAGCCGGTGCTGACATTGTCTTCTCCGAGGAAGTAGTGAATGACGCAAATCAAACATCACAATTGTTGAAATCTATTGCGAATGAGTATGATCTGTTCATCGTCGGAAGAGAAAAAGGAAGGAAGAGTGTTTTCACCGAGGGGCTTGAAGAATGGAGTGAGTTTGAAGAACTTGGTATCATTGGAGATCTCTTGACTTCACAGGATCTAAATTGTCAAGCTTCTGTGTTGGTGATACAACAGCAACAACAGATGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

817

Amino Acids

92.01

Weight (kDa)

8.51

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	68 - 467	3.6e-26	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	524 - 654	2.7e-10	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	667 - 813	1e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44900 AT5G22900
fragaria_vesca	FvH4_3g06341 FvH4_3g23050 FvH4_3g39831 FvH4_6g14510 FvH4_7g14610
malus_domestica	MD02G1295300.v1.1 MD03G1057300.v1.1 MD05G1291400.v1.1 MD10G1267300.v1.1 MD11G1059200.v1.1 MD14G1082300.v1.1
prunus_persica	Prupe.1G346300_v2.0.a1 Prupe.2G029000_v2.0.a1 Prupe.4G074200_v2.0.a1 Prupe.6G047400_v2.0.a1 Prupe.6G047500_v2.0.a1 Prupe.6G047600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0356111 RchiOBHm_Chr1g0356121 RchiOBHm_Chr4g0446581 RchiOBHm_Chr5g0071781
rosa_laevigata	RLG00000005649 RLG00000028106 RLG00000036246 RLG00000036247 RLG00000036248
rosa_multiflora	Rmu_sc0001113.1_g000009 Rmu_sc0002569.1_g000023 Rmu_sc0003229.1_g000013 Rmu_sc0036166.1_g000001 Rmu_ssc0000144.1_g000006
rosa_roxburghii	Rroxscaffold_1G00009380 Rroxscaffold_1G00009410 Rroxscaffold_4G00299800 Rroxscaffold_5G00386970
rosa_rugosa	Rorug04G0372400 Rorug05G0414600 Rorug05G0414700
rosa_samantha	Rh1AG262500 Rh1BG231000 Rh1CG245800 Rh4AG434100 Rh4BG443300 Rh4CG460600 Rh4DG442100 Rh5AG470700 Rh5BG490400 Rh5CG514400 Rh5DG501400 Rh5DG501600 Rh5DG501700
rosa_wichuraiana	Rw1G023190 Rw4G037110 Rw5G043740 Rw5G043750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1668
AatII	GACGTC	1 cut(s)	232
AccBSI	CCGCTC	2 cut(s)	96, 1393
AccII	CGCG	1 cut(s)	1109
AciI	CCGC	9 cut(s)	66, 96, 427, 713, 812, 1107, 1109, 1391, 1444
AclI	AACGTT	1 cut(s)	2190
AcoI	YGGCCR	2 cut(s)	655, 1331
AcsI	RAATTY	4 cut(s)	317, 643, 911, 1193
AcuI	CTGAAG	2 cut(s)	676, 1034
AcyI	GRCGYC	1 cut(s)	229
AfaI	GTAC	2 cut(s)	1361, 1427
AfiI	CCNNNNNNNGG	5 cut(s)	328, 611, 712, 1034, 1479
AflII	CTTAAG	1 cut(s)	293
AflIII	ACRYGT	3 cut(s)	156, 166, 1659
AgeI	ACCGGT	1 cut(s)	544
AgsI	TTSAA	8 cut(s)	563, 1276, 1372, 1538, 2079, 2263, 2342, 2360
AjiI	CACGTC	1 cut(s)	2179
Alw21I	GWGCWC	2 cut(s)	92, 1479
Alw26I	GTCTC	9 cut(s)	236, 338, 665, 1263, 1693, 1770, 1815, 1970, 2169
Ama87I	CYCGRG	2 cut(s)	85, 91
AoxI	GGCC	3 cut(s)	104, 655, 1331
ApeKI	GCWGC	2 cut(s)	429, 1982
ApoI	RAATTY	4 cut(s)	317, 643, 911, 1193
AseI	ATTAAT	1 cut(s)	863
AsiGI	ACCGGT	1 cut(s)	544
Asp700I	GAANNNNTTC	1 cut(s)	889
AspLEI	GCGC	1 cut(s)	494
AspS9I	GGNCC	3 cut(s)	105, 992, 1025
AsuC2I	CCSGG	1 cut(s)	436
AsuHPI	GGTGA	7 cut(s)	26, 241, 1348, 1622, 1823, 2320, 2437
AsuII	TTCGAA	1 cut(s)	1695
AvaI	CYCGRG	2 cut(s)	85, 91
AvaII	GGWCC	2 cut(s)	992, 1025
BaeGI	GKGCMC	1 cut(s)	818
BamHI	GGATCC	1 cut(s)	21
BanII	GRGCYC	2 cut(s)	92, 1479
BauI	CACGAG	1 cut(s)	2070
BbsI	GAAGAC	3 cut(s)	339, 663, 2206
Bbv12I	GWGCWC	2 cut(s)	92, 1479
BbvI	GCAGC	2 cut(s)	441, 1969
BccI	CCATC	4 cut(s)	391, 1585, 1844, 2096
BceAI	ACGGC	2 cut(s)	642, 1761
BcgI	CGANNNNNNTGC	4 cut(s)	1277, 1311, 1750, 1784
BciVI	GTATCC	1 cut(s)	1427
BclI	TGATCA	2 cut(s)	681, 1524
BcnI	CCSGG	1 cut(s)	436
BcoDI	GTCTC	9 cut(s)	236, 338, 665, 1263, 1693, 1770, 1815, 1970, 2169
BfaI	CTAG	7 cut(s)	312, 719, 1034, 1169, 1598, 2195, 2452
BfmI	CTRYAG	4 cut(s)	447, 675, 1377, 1566
BfrI	CTTAAG	1 cut(s)	293
BfuI	GTATCC	1 cut(s)	1427
BglII	AGATCT	2 cut(s)	1147, 2380
BisI	GCNGC	2 cut(s)	430, 1983
BlpI	GCTNAGC	1 cut(s)	1009
BlsI	GCNGC	2 cut(s)	431, 1984
Bme1390I	CCNGG	1 cut(s)	436
Bme18I	GGWCC	2 cut(s)	992, 1025
BmeT110I	CYCGRG	2 cut(s)	85, 91
BmgBI	CACGTC	1 cut(s)	2179
BmgT120I	GGNCC	3 cut(s)	105, 992, 1025
BmiI	GGNNCC	2 cut(s)	23, 638
BmrFI	CCNGG	1 cut(s)	436
BmrI	ACTGGG	2 cut(s)	276, 2152
BmsI	GCATC	2 cut(s)	40, 1758
BmuI	ACTGGG	2 cut(s)	276, 2152
BpiI	GAAGAC	3 cut(s)	339, 663, 2206
BplI	GAGNNNNNCTC	2 cut(s)	2053, 2085
BpmI	CTGGAG	1 cut(s)	623
Bpu10I	CCTNAGC	2 cut(s)	632, 1478
Bpu1102I	GCTNAGC	1 cut(s)	1009
Bpu14I	TTCGAA	1 cut(s)	1695
BpuEI	CTTGAG	6 cut(s)	114, 298, 436, 722, 1136, 1537
BpuMI	CCSGG	1 cut(s)	436
Bsa29I	ATCGAT	1 cut(s)	1119
BsaHI	GRCGYC	1 cut(s)	229
BsaJI	CCNNGG	3 cut(s)	1107, 2220, 2331
BsaWI	WCCGGW	1 cut(s)	544
BsaXI	ACNNNNNCTCC	2 cut(s)	531, 561
Bsc4I	CCNNNNNNNGG	5 cut(s)	328, 611, 712, 1034, 1479
Bse118I	RCCGGY	4 cut(s)	307, 544, 1333, 2198
Bse1I	ACTGG	3 cut(s)	271, 1616, 2147
Bse3DI	GCAATG	1 cut(s)	1248
BseCI	ATCGAT	1 cut(s)	1119
BseDI	CCNNGG	3 cut(s)	1107, 2220, 2331
BseGI	GGATG	3 cut(s)	1164, 1428, 1818
BseLI	CCNNNNNNNGG	5 cut(s)	328, 611, 712, 1034, 1479
BseMI	GCAATG	1 cut(s)	1248
BseMII	CTCAG	5 cut(s)	23, 238, 480, 1492, 2185
BseNI	ACTGG	3 cut(s)	271, 1616, 2147
BseSI	GKGCMC	1 cut(s)	818
BseX3I	CGGCCG	1 cut(s)	1331
BseXI	GCAGC	2 cut(s)	441, 1969
Bsh1236I	CGCG	1 cut(s)	1109
Bsh1285I	CGRYCG	1 cut(s)	1334
BshFI	GGCC	3 cut(s)	106, 657, 1333
BshTI	ACCGGT	1 cut(s)	544
BshVI	ATCGAT	1 cut(s)	1119
BsiEI	CGRYCG	1 cut(s)	1334
BsiHKAI	GWGCWC	2 cut(s)	92, 1479
BsiHKCI	CYCGRG	2 cut(s)	85, 91
BsiSI	CCGG	6 cut(s)	308, 435, 545, 1334, 1885, 2199
BslFI	GGGAC	4 cut(s)	541, 885, 1336, 1533
BslI	CCNNNNNNNGG	5 cut(s)	328, 611, 712, 1034, 1479
BsmAI	GTCTC	9 cut(s)	236, 338, 665, 1263, 1693, 1770, 1815, 1970, 2169
BsmBI	CGTCTC	4 cut(s)	236, 665, 1815, 2169
BsmFI	GGGAC	4 cut(s)	541, 885, 1336, 1533
BsnI	GGCC	3 cut(s)	106, 657, 1333
BsoBI	CYCGRG	2 cut(s)	85, 91
Bsp119I	TTCGAA	1 cut(s)	1695
Bsp1286I	GDGCHC	3 cut(s)	92, 818, 1479
Bsp1407I	TGTACA	1 cut(s)	1359
Bsp1720I	GCTNAGC	1 cut(s)	1009
BspACI	CCGC	9 cut(s)	66, 96, 427, 713, 812, 1107, 1109, 1391, 1444
BspANI	GGCC	3 cut(s)	106, 657, 1333
BspCNI	CTCAG	5 cut(s)	24, 237, 479, 1491, 2184
BspDI	ATCGAT	1 cut(s)	1119
BspFNI	CGCG	1 cut(s)	1109
BspLI	GGNNCC	2 cut(s)	23, 638
BspMAI	CTGCAG	2 cut(s)	679, 1381
BspT104I	TTCGAA	1 cut(s)	1695
BspTI	CTTAAG	1 cut(s)	293
BsrBI	CCGCTC	2 cut(s)	96, 1393
BsrDI	GCAATG	1 cut(s)	1248
BsrFI	RCCGGY	4 cut(s)	307, 544, 1333, 2198
BsrGI	TGTACA	1 cut(s)	1359
BsrI	ACTGG	3 cut(s)	271, 1616, 2147
BssAI	RCCGGY	4 cut(s)	307, 544, 1333, 2198
BssECI	CCNNGG	3 cut(s)	1107, 2220, 2331
BssNI	GRCGYC	1 cut(s)	229
BssSI	CACGAG	1 cut(s)	2070
Bst2BI	CACGAG	1 cut(s)	2070
Bst6I	CTCTTC	4 cut(s)	1107, 2116, 2296, 2312
BstACI	GRCGYC	1 cut(s)	229
BstAFI	CTTAAG	1 cut(s)	293
BstAUI	TGTACA	1 cut(s)	1359
BstBI	TTCGAA	1 cut(s)	1695
BstC8I	GCNNGC	7 cut(s)	98, 810, 814, 974, 1236, 1791, 2153
BstDSI	CCRYGG	1 cut(s)	1107
BstEII	GGTNACC	1 cut(s)	1336
BstF5I	GGATG	3 cut(s)	1164, 1428, 1818
BstFNI	CGCG	1 cut(s)	1109
BstHHI	GCGC	1 cut(s)	494
BstMAI	GTCTC	9 cut(s)	236, 338, 665, 1263, 1693, 1770, 1815, 1970, 2169
BstMCI	CGRYCG	1 cut(s)	1334
BstMWI	GCNNNNNNNGC	4 cut(s)	959, 1106, 1450, 2132
BstNSI	RCATGY	6 cut(s)	160, 170, 372, 1453, 1663, 2155
BstPI	GGTNACC	1 cut(s)	1336
BstSCI	CCNGG	1 cut(s)	434
BstSFI	CTRYAG	4 cut(s)	447, 675, 1377, 1566
BstSLI	GKGCMC	1 cut(s)	818
BstUI	CGCG	1 cut(s)	1109
BstV1I	GCAGC	2 cut(s)	441, 1969
BstV2I	GAAGAC	3 cut(s)	339, 663, 2206
BstX2I	RGATCY	5 cut(s)	21, 124, 1147, 2380, 2398
BstXI	CCANNNNNNTGG	2 cut(s)	2065, 2095
BstYI	RGATCY	5 cut(s)	21, 124, 1147, 2380, 2398
BstZI	CGGCCG	1 cut(s)	1331
Bsu15I	ATCGAT	1 cut(s)	1119
BsuI	GTATCC	1 cut(s)	1427
BsuRI	GGCC	3 cut(s)	106, 657, 1333
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	1 cut(s)	1107
BtrI	CACGTC	1 cut(s)	2179
BtsCI	GGATG	3 cut(s)	1164, 1428, 1818
BtsI	GCAGTG	1 cut(s)	684
BtsIMutI	CAGTG	5 cut(s)	474, 684, 691, 825, 2100
Cac8I	GCNNGC	7 cut(s)	98, 810, 814, 974, 1236, 1791, 2153
CfoI	GCGC	1 cut(s)	494
Cfr10I	RCCGGY	4 cut(s)	307, 544, 1333, 2198
Cfr13I	GGNCC	3 cut(s)	105, 992, 1025
Cfr42I	CCGCGG	1 cut(s)	1110
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	1 cut(s)	2246
Csp6I	GTAC	2 cut(s)	1360, 1426
CspAI	ACCGGT	1 cut(s)	544
CviQI	GTAC	2 cut(s)	1360, 1426
DraI	TTTAAA	1 cut(s)	1797
EaeI	YGGCCR	2 cut(s)	655, 1331
EagI	CGGCCG	1 cut(s)	1331
Eam1104I	CTCTTC	4 cut(s)	1107, 2116, 2296, 2312
EarI	CTCTTC	4 cut(s)	1107, 2116, 2296, 2312
Ecl136II	GAGCTC	2 cut(s)	90, 1477
EclXI	CGGCCG	1 cut(s)	1331
Eco24I	GRGCYC	2 cut(s)	92, 1479
Eco32I	GATATC	1 cut(s)	1513
Eco47I	GGWCC	2 cut(s)	992, 1025
Eco52I	CGGCCG	1 cut(s)	1331
Eco53kI	GAGCTC	2 cut(s)	90, 1477
Eco57I	CTGAAG	2 cut(s)	676, 1034
Eco88I	CYCGRG	2 cut(s)	85, 91
Eco91I	GGTNACC	1 cut(s)	1336
EcoICRI	GAGCTC	2 cut(s)	90, 1477
EcoO109I	RGGNCCY	1 cut(s)	992
EcoO65I	GGTNACC	1 cut(s)	1336
EcoRI	GAATTC	1 cut(s)	643
EcoRV	GATATC	1 cut(s)	1513
EcoT38I	GRGCYC	2 cut(s)	92, 1479
Esp3I	CGTCTC	4 cut(s)	236, 665, 1815, 2169
FaqI	GGGAC	4 cut(s)	541, 885, 1336, 1533
FauI	CCCGC	2 cut(s)	89, 805
FauNDI	CATATG	1 cut(s)	258
FbaI	TGATCA	2 cut(s)	681, 1524
Fnu4HI	GCNGC	2 cut(s)	430, 1983
FokI	GGATG	3 cut(s)	1151, 1435, 1805
FriOI	GRGCYC	2 cut(s)	92, 1479
Fsp4HI	GCNGC	2 cut(s)	430, 1983
FspBI	CTAG	7 cut(s)	312, 719, 1034, 1169, 1598, 2195, 2452
GlaI	GCGC	1 cut(s)	493
GluI	GCNGC	2 cut(s)	430, 1983
GsuI	CTGGAG	1 cut(s)	623
HaeIII	GGCC	3 cut(s)	106, 657, 1333
HapII	CCGG	6 cut(s)	308, 435, 545, 1334, 1885, 2199
HgaI	GACGC	1 cut(s)	2246
HhaI	GCGC	1 cut(s)	494
Hin1I	GRCGYC	1 cut(s)	229
Hin6I	GCGC	1 cut(s)	492
HinP1I	GCGC	1 cut(s)	492
HindIII	AAGCTT	2 cut(s)	2043, 2412
HinfI	GANTC	8 cut(s)	241, 271, 346, 1061, 1207, 1483, 1932, 2075
HpaII	CCGG	6 cut(s)	308, 435, 545, 1334, 1885, 2199
HphI	GGTGA	7 cut(s)	26, 241, 1348, 1622, 1823, 2320, 2437
Hpy166II	GTNNAC	1 cut(s)	1028
Hpy8I	GTNNAC	1 cut(s)	1028
Hpy99I	CGWCG	4 cut(s)	331, 601, 1685, 2300
HpyAV	CCTTC	8 cut(s)	629, 900, 1094, 1228, 1425, 1592, 1832, 2307
HpyCH4IV	ACGT	6 cut(s)	229, 1578, 1680, 1808, 2178, 2190
HpyF10VI	GCNNNNNNNGC	4 cut(s)	959, 1106, 1450, 2132
HpySE526I	ACGT	6 cut(s)	229, 1578, 1680, 1808, 2178, 2190
Hsp92I	GRCGYC	1 cut(s)	229
HspAI	GCGC	1 cut(s)	492
Ksp22I	TGATCA	2 cut(s)	681, 1524
KspI	CCGCGG	1 cut(s)	1110
LmnI	GCTCC	3 cut(s)	123, 642, 1594
Lsp1109I	GCAGC	2 cut(s)	441, 1969
LweI	GCATC	2 cut(s)	40, 1758
MaeI	CTAG	7 cut(s)	312, 719, 1034, 1169, 1598, 2195, 2452
MaeII	ACGT	6 cut(s)	229, 1578, 1680, 1808, 2178, 2190
MaeIII	GTNAC	4 cut(s)	190, 471, 686, 1336
MbiI	CCGCTC	2 cut(s)	96, 1393
MfeI	CAATTG	1 cut(s)	2255
MflI	RGATCY	5 cut(s)	21, 124, 1147, 2380, 2398
MhlI	GDGCHC	3 cut(s)	92, 818, 1479
MlyI	GAGTC	3 cut(s)	340, 1070, 1201
MmeI	TCCRAC	3 cut(s)	769, 1909, 2278
MroXI	GAANNNNTTC	1 cut(s)	889
MseI	TTAA	7 cut(s)	9, 81, 294, 405, 863, 1397, 1796
MslI	CAYNNNNRTG	3 cut(s)	1169, 1784, 2093
MspA1I	CMGCKG	2 cut(s)	1109, 1982
MspCI	CTTAAG	1 cut(s)	293
MspI	CCGG	6 cut(s)	308, 435, 545, 1334, 1885, 2199
MspR9I	CCNGG	1 cut(s)	436
MunI	CAATTG	1 cut(s)	2255
MvnI	CGCG	1 cut(s)	1109
MwoI	GCNNNNNNNGC	4 cut(s)	959, 1106, 1450, 2132
NciI	CCSGG	1 cut(s)	436
NdeI	CATATG	1 cut(s)	258
NlaIV	GGNNCC	2 cut(s)	23, 638
NmeAIII	GCCGAG	2 cut(s)	213, 733
NmuCI	GTSAC	3 cut(s)	190, 686, 1336
NspI	RCATGY	6 cut(s)	160, 170, 372, 1453, 1663, 2155
NspV	TTCGAA	1 cut(s)	1695
PaeI	GCATGC	1 cut(s)	2155
PaeR7I	CTCGAG	1 cut(s)	91
PciI	ACATGT	3 cut(s)	156, 166, 1659
PcsI	WCGNNNNNNNCGW	2 cut(s)	1434, 1935
PdmI	GAANNNNTTC	1 cut(s)	889
PfeI	GAWTC	5 cut(s)	241, 271, 1483, 1932, 2075
PflFI	GACNNNGTC	2 cut(s)	1840, 2210
PinAI	ACCGGT	1 cut(s)	544
PkrI	GCNGC	2 cut(s)	431, 1984
PleI	GAGTC	3 cut(s)	340, 1069, 1201
PpsI	GAGTC	3 cut(s)	340, 1069, 1201
PpuMI	RGGWCCY	1 cut(s)	992
PscI	ACATGT	3 cut(s)	156, 166, 1659
PshBI	ATTAAT	1 cut(s)	863
PsiI	TTATAA	1 cut(s)	1668
Psp124BI	GAGCTC	2 cut(s)	92, 1479
Psp1406I	AACGTT	1 cut(s)	2190
Psp5II	RGGWCCY	1 cut(s)	992
PspEI	GGTNACC	1 cut(s)	1336
PspN4I	GGNNCC	2 cut(s)	23, 638
PspPI	GGNCC	3 cut(s)	105, 992, 1025
PspPPI	RGGWCCY	1 cut(s)	992
PspXI	VCTCGAGB	1 cut(s)	91
PsrI	GAACNNNNNNTAC	2 cut(s)	2273, 2305
PstI	CTGCAG	2 cut(s)	679, 1381
PsuI	RGATCY	5 cut(s)	21, 124, 1147, 2380, 2398
PsyI	GACNNNGTC	2 cut(s)	1840, 2210
PvuII	CAGCTG	1 cut(s)	1982
RsaI	GTAC	2 cut(s)	1361, 1427
RsaNI	GTAC	2 cut(s)	1360, 1426
RseI	CAYNNNNRTG	3 cut(s)	1169, 1784, 2093
SacI	GAGCTC	2 cut(s)	92, 1479
SacII	CCGCGG	1 cut(s)	1110
SaqAI	TTAA	7 cut(s)	9, 81, 294, 405, 863, 1397, 1796
SatI	GCNGC	2 cut(s)	430, 1983
Sau96I	GGNCC	3 cut(s)	105, 992, 1025
SchI	GAGTC	3 cut(s)	340, 1070, 1201
ScrFI	CCNGG	1 cut(s)	436
SduI	GDGCHC	3 cut(s)	92, 818, 1479
SfaNI	GCATC	2 cut(s)	40, 1758
SfcI	CTRYAG	4 cut(s)	447, 675, 1377, 1566
Sfr274I	CTCGAG	1 cut(s)	91
Sfr303I	CCGCGG	1 cut(s)	1110
SfuI	TTCGAA	1 cut(s)	1695
SgrBI	CCGCGG	1 cut(s)	1110
SinI	GGWCC	2 cut(s)	992, 1025
SlaI	CTCGAG	1 cut(s)	91
SmiMI	CAYNNNNRTG	3 cut(s)	1169, 1784, 2093
SmlI	CTYRAG	8 cut(s)	91, 129, 277, 293, 415, 737, 1151, 1552
SmoI	CTYRAG	8 cut(s)	91, 129, 277, 293, 415, 737, 1151, 1552
SphI	GCATGC	1 cut(s)	2155
SsiI	CCGC	9 cut(s)	66, 96, 427, 713, 812, 1107, 1109, 1391, 1444
SspMI	CTAG	7 cut(s)	312, 719, 1034, 1169, 1598, 2195, 2452
SstI	GAGCTC	2 cut(s)	92, 1479
StyD4I	CCNGG	1 cut(s)	434
TaiI	ACGT	6 cut(s)	232, 1581, 1683, 1811, 2181, 2193
TaqII	GACCGA	1 cut(s)	446
TatI	WGTACW	1 cut(s)	1359
TfiI	GAWTC	5 cut(s)	241, 271, 1483, 1932, 2075
Tru1I	TTAA	7 cut(s)	9, 81, 294, 405, 863, 1397, 1796
Tru9I	TTAA	7 cut(s)	9, 81, 294, 405, 863, 1397, 1796
TscAI	CASTG	5 cut(s)	474, 684, 691, 825, 2100
TseFI	GTSAC	3 cut(s)	190, 686, 1336
TseI	GCWGC	2 cut(s)	429, 1982
Tsp45I	GTSAC	3 cut(s)	190, 686, 1336
TspDTI	ATGAA	6 cut(s)	562, 818, 862, 976, 1475, 2281
TspGWI	ACGGA	5 cut(s)	344, 1505, 1744, 1788, 1975
TspRI	CASTG	5 cut(s)	474, 684, 691, 825, 2100
Tth111I	GACNNNGTC	2 cut(s)	1840, 2210
Vha464I	CTTAAG	1 cut(s)	293
VpaK11BI	GGWCC	2 cut(s)	992, 1025
VspI	ATTAAT	1 cut(s)	863
XapI	RAATTY	4 cut(s)	317, 643, 911, 1193
XceI	RCATGY	6 cut(s)	160, 170, 372, 1453, 1663, 2155
XcmI	CCANNNNNNNNNTGG	1 cut(s)	263
XhoI	CTCGAG	1 cut(s)	91
XmnI	GAANNNNTTC	1 cut(s)	889
XspI	CTAG	7 cut(s)	312, 719, 1034, 1169, 1598, 2195, 2452
ZraI	GACGTC	1 cut(s)	230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.