Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000144.1

Orthogroup ID

OG0001192

Physical Location & Seq

Genomic Coordinates Forward (+)

31116 .. 33866

Gene Structure 2751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000144.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

atgagtattacaccggcgtcgtccctgttcaataagagcttgacttgcgtggagttaccgcccaacattcattcaagtggtatgtggcagaaactagatgctactgctgcagaagatgagtttaacaccacgagtgctacattgccaatgctccaaaagaaaatgcttatgaccttcttagccacccagctcttccatctcattctcggttcttttggcgtcccattcttcgtctctcaaatgctggcaggattcttacttggtccagcggtggttggcagaattaaattggacgaaaattggtacaatgactggatgttgtccttgacaagtcaggacatacttggcactctcacaatgtttggcttctccatgtttttgtttctggcagcagtgaagatggatgcaagcctgttattgaagactgggagaaaggccttttacactggtgtattctccttgatagttcccctaatttttggcttttccacagttaggttgcttgaatatcaggagaaaattaatccgaaagagaaaaaaagagaggctattttcctggtattatcaatctgtgcaacatcatttcctgtcatagtttcccttcttagccaactccgtatccttacatcggaactcgggcgattaggattgtcagcagctctagtgtgtgacatgctaaaattgattctcactactattgcgagagcgtttgttccaaccccaagtgccagaaagtttagttacaagtcgtctcttgttatcttgggatatagtctggcttgtgcgttcgtggcccggccggctttgaattgggtcatcagacagacacctaaagggaagcctgttaacaatgcctacatttttgtcatcctcctgctggccttggcctccggagctcacgagcaacttgttttatttggacctttctttttcggcttagttataccaagtggacctcccctcgggtcgaccctggttcagaaatacgacttcatggtctcgcgtgtgttcatgccactgtttgtcaccaattgtgtgatcatggcagatgtcagggaactccgcttcgatgcccatttactagtcttgctggtaactatgttggccaaattcttgggcactttagcacctgcactctgctgtagaattcctatcagggatgctttggcactcgctttcatactgagctgcaaaggtgctgttgaaatcggtggttacttcgtgatctatgacggccagcgtatcaccgacggaatttatgctttggcgatgttgatgatcctattcgcccatttcaccgtggcatatgctgtgaagcacttgtacaagacatcgactaggtacgcagggtatcagcagagaaacgtactaggcatgagacctaactcggagctcaagatactttcctgcatctacaaacaagacaacgtgccagctgtcatcaacttattggatgtggcttgccctaccggagataaccccattggtctcaacgtcctccaccttatagagatgaccggccaagacgcccccatgctcatttcccaccgcatgcagaagaagacaatgtccagcttctccgactccgaggacgtcctcgtttctttccttaatttggagcgggagtacggtgacgccgttgaggttcacccctacaccgccgtatggccgtcaaagtggatgtacgaagagatatgcacactcgccctagacaggctcacacatctcatcatactccccttccaccgccagtggaccgtggacggcgccgttaaatcggaggacgaaaccgtcaggaacataaacattagcgttctagatggatcaccttgttccgtaggagttctagtcaaccggggcccgctccggcaaaaccacagaacagaagcgtcgcaatcacagttcaacgttgcgttgattttcttgggtggcgaagacgatagggaggcgttggctttgacgggaaggatgaccgccgacccaaacatcaccctaaccgtgtttcatatcagtcccaccacactgcctgaaaatggacctaactgggagaacattctggactttgagagcttaaggaagttcaggcaaaacaacaccggcaacggccgttacgtgatttacacggaggcggtttcggagagtggggaacaaactgttgacatgttgagggagatcgtgcacaagtatgaccttttcgtggttgggaggaggaaagaggttaaggatagtcctcagacttcagggcttgaagattggagtgagttcccggagcttgggattgtaggtgacatgctcgcatcggatgatttgggttgcagatcttctatcttggtggtgcagaaccaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

782

Amino Acids

86.93

Weight (kDa)

6.56

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44900 AT5G22900
fragaria_vesca	FvH4_3g06341 FvH4_3g23050 FvH4_3g39831 FvH4_6g14510 FvH4_7g14610
malus_domestica	MD02G1295300.v1.1 MD03G1057300.v1.1 MD05G1291400.v1.1 MD10G1267300.v1.1 MD11G1059200.v1.1 MD14G1082300.v1.1
prunus_persica	Prupe.1G346300_v2.0.a1 Prupe.2G029000_v2.0.a1 Prupe.4G074200_v2.0.a1 Prupe.6G047400_v2.0.a1 Prupe.6G047500_v2.0.a1 Prupe.6G047600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0356111 RchiOBHm_Chr1g0356121 RchiOBHm_Chr4g0446581 RchiOBHm_Chr5g0071781
rosa_laevigata	RLG00000005649 RLG00000028106 RLG00000036246 RLG00000036247 RLG00000036248
rosa_multiflora	Rmu_sc0001113.1_g000009 Rmu_sc0002569.1_g000023 Rmu_sc0003229.1_g000013 Rmu_sc0036166.1_g000001 Rmu_ssc0000144.1_g000006
rosa_roxburghii	Rroxscaffold_1G00009380 Rroxscaffold_1G00009410 Rroxscaffold_4G00299800 Rroxscaffold_5G00386970
rosa_rugosa	Rorug04G0372400 Rorug05G0414600 Rorug05G0414700
rosa_samantha	Rh1AG262500 Rh1BG231000 Rh1CG245800 Rh4AG434100 Rh4BG443300 Rh4CG460600 Rh4DG442100 Rh5AG470700 Rh5BG490400 Rh5CG514400 Rh5DG501400 Rh5DG501600 Rh5DG501700
rosa_wichuraiana	Rw1G023190 Rw4G037110 Rw5G043740 Rw5G043750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1138
AasI	GACNNNNNNGTC	2 cut(s)	995, 1790
AatII	GACGTC	1 cut(s)	1596
Acc36I	ACCTGC	1 cut(s)	1138
AccB1I	GGYRCC	1 cut(s)	1766
AccBSI	CCGCTC	2 cut(s)	1621, 1864
AccI	GTMKAC	1 cut(s)	968
AccII	CGCG	1 cut(s)	1003
AccIII	TCCGGA	1 cut(s)	890
AclI	AACGTT	1 cut(s)	1908
AclWI	GGATC	2 cut(s)	1273, 1831
AcoI	YGGCCR	6 cut(s)	797, 1104, 1234, 1519, 1667, 2104
AcsI	RAATTY	3 cut(s)	1109, 1146, 1254
AcuI	CTGAAG	1 cut(s)	2223
AcyI	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
AfaI	GTAC	6 cut(s)	305, 1325, 1343, 1368, 1628, 1685
AflII	CTTAAG	1 cut(s)	2071
AflIII	ACRYGT	1 cut(s)	2160
AgsI	TTSAA	8 cut(s)	31, 75, 421, 506, 808, 1205, 1906, 2249
AhlI	ACTAGT	1 cut(s)	1081
AjnI	CCWGG	2 cut(s)	555, 972
Alw21I	GWGCWC	3 cut(s)	898, 1395, 2181
Alw26I	GTCTC	5 cut(s)	238, 756, 1003, 1372, 1493
Alw44I	GTGCAC	1 cut(s)	2177
AlwI	GGATC	2 cut(s)	1273, 1831
Ama87I	CYCGRG	2 cut(s)	635, 962
Aor13HI	TCCGGA	1 cut(s)	890
ApaI	GGGCCC	1 cut(s)	1862
ApaLI	GTGCAC	1 cut(s)	2177
ApeKI	GCWGC	4 cut(s)	107, 389, 656, 1188
ApoI	RAATTY	3 cut(s)	1109, 1146, 1254
AseI	ATTAAT	1 cut(s)	522
AspLEI	GCGC	1 cut(s)	1769
AspS9I	GGNCC	8 cut(s)	263, 793, 920, 953, 1755, 1858, 1859, 2036
AsuC2I	CCSGG	3 cut(s)	796, 1856, 2267
AsuHPI	GGTGA	8 cut(s)	1018, 1237, 1288, 1640, 1643, 1818, 1981, 2297
AvaI	CYCGRG	2 cut(s)	635, 962
AvaII	GGWCC	5 cut(s)	263, 920, 953, 1755, 2036
BaeGI	GKGCMC	3 cut(s)	1121, 1862, 2181
BalI	TGGCCA	1 cut(s)	1106
BanI	GGYRCC	1 cut(s)	1766
BanII	GRGCYC	3 cut(s)	898, 1395, 1862
BarI	GAAGNNNNNNTAC	2 cut(s)	1307, 1339
BauI	CACGAG	2 cut(s)	130, 899
BbsI	GAAGAC	3 cut(s)	428, 1568, 1941
Bbv12I	GWGCWC	3 cut(s)	898, 1395, 2181
BbvI	GCAGC	4 cut(s)	94, 401, 668, 1175
BccI	CCATC	3 cut(s)	204, 394, 1814
BceAI	ACGGC	8 cut(s)	1249, 1622, 1646, 1654, 1754, 1780, 2091, 2119
BciT130I	CCWGG	2 cut(s)	557, 974
BciVI	GTATCC	1 cut(s)	629
BclI	TGATCA	1 cut(s)	1038
BcnI	CCSGG	3 cut(s)	796, 1856, 2267
BcoDI	GTCTC	5 cut(s)	238, 756, 1003, 1372, 1493
BcuI	ACTAGT	1 cut(s)	1081
BfaI	CTAG	8 cut(s)	95, 662, 1082, 1338, 1370, 1709, 1817, 1847
BfmI	CTRYAG	2 cut(s)	108, 1141
BfoI	RGCGCY	1 cut(s)	1770
BfrI	CTTAAG	1 cut(s)	2071
BfuAI	ACCTGC	1 cut(s)	1138
BfuI	GTATCC	1 cut(s)	629
BglI	GCCNNNNNGGC	1 cut(s)	800
BglII	AGATCT	1 cut(s)	2318
BisI	GCNGC	4 cut(s)	108, 390, 657, 1189
BlsI	GCNGC	4 cut(s)	109, 391, 658, 1190
Bme1390I	CCNGG	5 cut(s)	557, 796, 974, 1856, 2267
Bme18I	GGWCC	5 cut(s)	263, 920, 953, 1755, 2036
BmeT110I	CYCGRG	2 cut(s)	635, 962
BmgT120I	GGNCC	8 cut(s)	263, 793, 920, 953, 1755, 1858, 1859, 2036
BmiI	GGNNCC	3 cut(s)	1768, 1859, 1860
BmrFI	CCNGG	5 cut(s)	557, 796, 974, 1856, 2267
BmrI	ACTGGG	2 cut(s)	435, 2053
BmsI	GCATC	6 cut(s)	88, 394, 1060, 1150, 1419, 2306
BmuI	ACTGGG	2 cut(s)	435, 2053
BpiI	GAAGAC	3 cut(s)	428, 1568, 1941
BpuEI	CTTGAG	1 cut(s)	1379
BpuMI	CCSGG	3 cut(s)	796, 1856, 2267
BsaAI	YACGTR	1 cut(s)	2113
BsaHI	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
BsaI	GGTCTC	3 cut(s)	1003, 1372, 1493
BsaJI	CCNNGG	7 cut(s)	882, 961, 972, 1299, 1587, 1758, 1855
BsaWI	WCCGGW	2 cut(s)	890, 1469
BsaXI	ACNNNNNCTCC	4 cut(s)	1610, 1640, 1833, 1863
Bse118I	RCCGGY	4 cut(s)	13, 799, 1517, 2096
Bse1I	ACTGG	5 cut(s)	317, 430, 451, 1750, 2048
Bse3DI	GCAATG	1 cut(s)	140
BseAI	TCCGGA	1 cut(s)	890
BseBI	CCWGG	2 cut(s)	557, 974
BseDI	CCNNGG	7 cut(s)	882, 961, 972, 1299, 1587, 1758, 1855
BseGI	GGATG	8 cut(s)	321, 409, 867, 1165, 1459, 1686, 1974, 2308
BseMI	GCAATG	1 cut(s)	140
BseMII	CTCAG	2 cut(s)	1175, 2246
BseNI	ACTGG	5 cut(s)	317, 430, 451, 1750, 2048
BseRI	GAGGAG	1 cut(s)	2221
BseSI	GKGCMC	3 cut(s)	1121, 1862, 2181
BseX3I	CGGCCG	2 cut(s)	797, 2104
BseXI	GCAGC	4 cut(s)	94, 401, 668, 1175
BseYI	CCCAGC	1 cut(s)	186
BsgI	GTGCAG	1 cut(s)	1116
Bsh1236I	CGCG	1 cut(s)	1003
Bsh1285I	CGRYCG	2 cut(s)	800, 2107
BshNI	GGYRCC	1 cut(s)	1766
BsiEI	CGRYCG	2 cut(s)	800, 2107
BsiHKAI	GWGCWC	3 cut(s)	898, 1395, 2181
BsiHKCI	CYCGRG	2 cut(s)	635, 962
BslFI	GGGAC	3 cut(s)	7, 206, 1998
BsmAI	GTCTC	5 cut(s)	238, 756, 1003, 1372, 1493
BsmBI	CGTCTC	2 cut(s)	238, 756
BsmFI	GGGAC	3 cut(s)	7, 206, 1998
Bso31I	GGTCTC	3 cut(s)	1003, 1372, 1493
BsoBI	CYCGRG	2 cut(s)	635, 962
Bsp120I	GGGCCC	1 cut(s)	1858
Bsp1286I	GDGCHC	5 cut(s)	898, 1121, 1395, 1862, 2181
Bsp13I	TCCGGA	1 cut(s)	890
Bsp1407I	TGTACA	1 cut(s)	1323
Bsp143I	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
BspCNI	CTCAG	2 cut(s)	1176, 2245
BspEI	TCCGGA	1 cut(s)	890
BspFNI	CGCG	1 cut(s)	1003
BspLI	GGNNCC	3 cut(s)	1768, 1859, 1860
BspMAI	CTGCAG	1 cut(s)	112
BspMI	ACCTGC	1 cut(s)	1138
BspPI	GGATC	2 cut(s)	1273, 1831
BspQI	GCTCTTC	1 cut(s)	197
BspT107I	GGYRCC	1 cut(s)	1766
BspTI	CTTAAG	1 cut(s)	2071
BspTNI	GGTCTC	3 cut(s)	1003, 1372, 1493
BsrBI	CCGCTC	2 cut(s)	1621, 1864
BsrDI	GCAATG	1 cut(s)	140
BsrFI	RCCGGY	4 cut(s)	13, 799, 1517, 2096
BsrGI	TGTACA	1 cut(s)	1323
BsrI	ACTGG	5 cut(s)	317, 430, 451, 1750, 2048
BssAI	RCCGGY	4 cut(s)	13, 799, 1517, 2096
BssECI	CCNNGG	7 cut(s)	882, 961, 972, 1299, 1587, 1758, 1855
BssMI	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
BssNI	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
BssSI	CACGAG	2 cut(s)	130, 899
BssT1I	CCWWGG	1 cut(s)	882
Bst2BI	CACGAG	2 cut(s)	130, 899
Bst2UI	CCWGG	2 cut(s)	557, 974
Bst4CI	ACNGT	9 cut(s)	493, 1020, 1300, 1631, 1759, 1792, 1902, 1999, 2155
Bst6I	CTCTTC	2 cut(s)	197, 1683
BstACI	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
BstAFI	CTTAAG	1 cut(s)	2071
BstAUI	TGTACA	1 cut(s)	1323
BstBAI	YACGTR	1 cut(s)	2113
BstDEI	CTNAG	5 cut(s)	178, 605, 937, 1184, 2232
BstDSI	CCRYGG	2 cut(s)	1299, 1758
BstF5I	GGATG	8 cut(s)	321, 409, 867, 1165, 1459, 1686, 1974, 2308
BstFNI	CGCG	1 cut(s)	1003
BstH2I	RGCGCY	1 cut(s)	1770
BstHHI	GCGC	1 cut(s)	1769
BstKTI	GATC	6 cut(s)	1041, 1227, 1281, 1826, 2175, 2321
BstMAI	GTCTC	5 cut(s)	238, 756, 1003, 1372, 1493
BstMBI	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
BstMCI	CGRYCG	2 cut(s)	800, 2107
BstMWI	GCNNNNNNNGC	5 cut(s)	45, 107, 791, 800, 893
BstNI	CCWGG	2 cut(s)	557, 974
BstNSI	RCATGY	4 cut(s)	676, 1555, 2164, 2293
BstSCI	CCNGG	5 cut(s)	555, 794, 972, 1854, 2265
BstSFI	CTRYAG	2 cut(s)	108, 1141
BstSLI	GKGCMC	3 cut(s)	1121, 1862, 2181
BstUI	CGCG	1 cut(s)	1003
BstV1I	GCAGC	4 cut(s)	94, 401, 668, 1175
BstV2I	GAAGAC	3 cut(s)	428, 1568, 1941
BstX2I	RGATCY	1 cut(s)	2318
BstXI	CCANNNNNNTGG	1 cut(s)	1114
BstYI	RGATCY	1 cut(s)	2318
BstZI	CGGCCG	2 cut(s)	797, 2104
BsuI	GTATCC	1 cut(s)	629
BtgI	CCRYGG	2 cut(s)	1299, 1758
BtgZI	GCGATG	1 cut(s)	1283
BtsCI	GGATG	8 cut(s)	321, 409, 867, 1165, 1459, 1686, 1974, 2308
BtsI	GCAGTG	2 cut(s)	399, 2021
BtsIMutI	CAGTG	5 cut(s)	399, 444, 1016, 1757, 2021
BveI	ACCTGC	1 cut(s)	1138
CfoI	GCGC	1 cut(s)	1769
Cfr10I	RCCGGY	4 cut(s)	13, 799, 1517, 2096
Cfr13I	GGNCC	8 cut(s)	263, 793, 920, 953, 1755, 1858, 1859, 2036
CseI	GACGC	5 cut(s)	6, 208, 1535, 1643, 1878
Csp6I	GTAC	6 cut(s)	304, 1324, 1342, 1367, 1627, 1684
CviQI	GTAC	6 cut(s)	304, 1324, 1342, 1367, 1627, 1684
DdeI	CTNAG	5 cut(s)	178, 605, 937, 1184, 2232
DinI	GGCGCC	1 cut(s)	1768
DpnI	GATC	6 cut(s)	1040, 1226, 1280, 1825, 2174, 2320
DpnII	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
DrdI	GACNNNNNNGTC	2 cut(s)	995, 1790
DseDI	GACNNNNNNGTC	2 cut(s)	995, 1790
EaeI	YGGCCR	6 cut(s)	797, 1104, 1234, 1519, 1667, 2104
EagI	CGGCCG	2 cut(s)	797, 2104
Eam1104I	CTCTTC	2 cut(s)	197, 1683
EarI	CTCTTC	2 cut(s)	197, 1683
Ecl136II	GAGCTC	2 cut(s)	896, 1393
EclXI	CGGCCG	2 cut(s)	797, 2104
Eco130I	CCWWGG	1 cut(s)	882
Eco147I	AGGCCT	1 cut(s)	437
Eco24I	GRGCYC	3 cut(s)	898, 1395, 1862
Eco31I	GGTCTC	3 cut(s)	1003, 1372, 1493
Eco47I	GGWCC	5 cut(s)	263, 920, 953, 1755, 2036
Eco52I	CGGCCG	2 cut(s)	797, 2104
Eco53kI	GAGCTC	2 cut(s)	896, 1393
Eco57I	CTGAAG	1 cut(s)	2223
Eco88I	CYCGRG	2 cut(s)	635, 962
EcoICRI	GAGCTC	2 cut(s)	896, 1393
EcoO109I	RGGNCCY	1 cut(s)	1858
EcoRI	GAATTC	1 cut(s)	1146
EcoRII	CCWGG	2 cut(s)	555, 972
EcoT14I	CCWWGG	1 cut(s)	882
EcoT38I	GRGCYC	3 cut(s)	898, 1395, 1862
EgeI	GGCGCC	1 cut(s)	1768
EheI	GGCGCC	1 cut(s)	1768
ErhI	CCWWGG	1 cut(s)	882
Esp3I	CGTCTC	2 cut(s)	238, 756
FaqI	GGGAC	3 cut(s)	7, 206, 1998
FauI	CCCGC	2 cut(s)	1614, 1869
FauNDI	CATATG	1 cut(s)	1306
FbaI	TGATCA	1 cut(s)	1038
FblI	GTMKAC	1 cut(s)	968
Fnu4HI	GCNGC	4 cut(s)	108, 390, 657, 1189
FokI	GGATG	8 cut(s)	328, 416, 854, 1172, 1466, 1693, 1981, 2315
FriOI	GRGCYC	3 cut(s)	898, 1395, 1862
Fsp4HI	GCNGC	4 cut(s)	108, 390, 657, 1189
FspBI	CTAG	8 cut(s)	95, 662, 1082, 1338, 1370, 1709, 1817, 1847
GlaI	GCGC	1 cut(s)	1768
GluI	GCNGC	4 cut(s)	108, 390, 657, 1189
GsaI	CCCAGC	1 cut(s)	190
HaeII	RGCGCY	1 cut(s)	1770
HgaI	GACGC	5 cut(s)	6, 208, 1535, 1643, 1878
HhaI	GCGC	1 cut(s)	1769
Hin1I	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
Hin6I	GCGC	1 cut(s)	1767
HinP1I	GCGC	1 cut(s)	1767
HincII	GTYRAC	4 cut(s)	847, 969, 1852, 2158
HindII	GTYRAC	4 cut(s)	847, 969, 1852, 2158
HinfI	GANTC	3 cut(s)	252, 685, 1583
HpaI	GTTAAC	1 cut(s)	847
HphI	GGTGA	8 cut(s)	1018, 1237, 1288, 1640, 1643, 1818, 1981, 2297
Hpy166II	GTNNAC	9 cut(s)	847, 953, 969, 1648, 1755, 1762, 1852, 2158, 2179
Hpy188III	TCNNGA	9 cut(s)	335, 512, 891, 899, 1222, 1396, 1795, 1817, 2057
Hpy8I	GTNNAC	9 cut(s)	847, 953, 969, 1648, 1755, 1762, 1852, 2158, 2179
Hpy99I	CGWCG	3 cut(s)	22, 1253, 1894
HpyAV	CCTTC	4 cut(s)	184, 611, 1750, 1959
HpyCH4III	ACNGT	9 cut(s)	493, 1020, 1300, 1631, 1759, 1792, 1902, 1999, 2155
HpyCH4IV	ACGT	6 cut(s)	1365, 1428, 1494, 1593, 1908, 2112
HpyF10VI	GCNNNNNNNGC	5 cut(s)	45, 107, 791, 800, 893
HpyF3I	CTNAG	5 cut(s)	178, 605, 937, 1184, 2232
HpySE526I	ACGT	6 cut(s)	1365, 1428, 1494, 1593, 1908, 2112
Hsp92I	GRCGYC	6 cut(s)	17, 219, 1527, 1593, 1635, 1767
HspAI	GCGC	1 cut(s)	1767
KasI	GGCGCC	1 cut(s)	1766
Kpn2I	TCCGGA	1 cut(s)	890
KroI	GCCGGC	1 cut(s)	799
KroNI	GCCGGC	1 cut(s)	801
Ksp22I	TGATCA	1 cut(s)	1038
KspAI	GTTAAC	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
LguI	GCTCTTC	1 cut(s)	197
LmnI	GCTCC	6 cut(s)	156, 893, 1390, 1618, 1869, 2269
Lsp1109I	GCAGC	4 cut(s)	94, 401, 668, 1175
LweI	GCATC	6 cut(s)	88, 394, 1060, 1150, 1419, 2306
MaeI	CTAG	8 cut(s)	95, 662, 1082, 1338, 1370, 1709, 1817, 1847
MaeII	ACGT	6 cut(s)	1365, 1428, 1494, 1593, 1908, 2112
MaeIII	GTNAC	9 cut(s)	54, 668, 740, 1024, 1093, 1214, 1631, 2108, 2285
MalI	GATC	6 cut(s)	1040, 1226, 1280, 1825, 2174, 2320
MbiI	CCGCTC	2 cut(s)	1621, 1864
MboI	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
MfeI	CAATTG	1 cut(s)	1030
MflI	RGATCY	1 cut(s)	2318
MhlI	GDGCHC	5 cut(s)	898, 1121, 1395, 1862, 2181
MlsI	TGGCCA	1 cut(s)	1106
MluNI	TGGCCA	1 cut(s)	1106
Mly113I	GGCGCC	1 cut(s)	1767
MlyI	GAGTC	1 cut(s)	1577
MmeI	TCCRAC	2 cut(s)	740, 1605
Mox20I	TGGCCA	1 cut(s)	1106
MroI	TCCGGA	1 cut(s)	890
MroNI	GCCGGC	1 cut(s)	799
MscI	TGGCCA	1 cut(s)	1106
MseI	TTAA	8 cut(s)	123, 285, 522, 846, 1611, 1773, 2072, 2220
MslI	CAYNNNNRTG	2 cut(s)	75, 2184
Msp20I	TGGCCA	1 cut(s)	1106
MspA1I	CMGCKG	2 cut(s)	269, 1436
MspCI	CTTAAG	1 cut(s)	2071
MspR9I	CCNGG	5 cut(s)	557, 796, 974, 1856, 2267
MunI	CAATTG	1 cut(s)	1030
MvaI	CCWGG	2 cut(s)	557, 974
MvnI	CGCG	1 cut(s)	1003
MwoI	GCNNNNNNNGC	5 cut(s)	45, 107, 791, 800, 893
NaeI	GCCGGC	1 cut(s)	801
NarI	GGCGCC	1 cut(s)	1767
NciI	CCSGG	3 cut(s)	796, 1856, 2267
NdeI	CATATG	1 cut(s)	1306
NdeII	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
NgoMIV	GCCGGC	1 cut(s)	799
NlaIV	GGNNCC	3 cut(s)	1768, 1859, 1860
NmuCI	GTSAC	4 cut(s)	668, 1024, 1631, 2285
NspI	RCATGY	4 cut(s)	676, 1555, 2164, 2293
PaeI	GCATGC	1 cut(s)	1555
PaqCI	CACCTGC	1 cut(s)	1138
PceI	AGGCCT	1 cut(s)	437
PciI	ACATGT	1 cut(s)	2160
PciSI	GCTCTTC	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	2 cut(s)	1635, 2109
PdiI	GCCGGC	1 cut(s)	801
PfeI	GAWTC	2 cut(s)	252, 685
PflFI	GACNNNGTC	1 cut(s)	1567
PfoI	TCCNGGA	1 cut(s)	2265
PkrI	GCNGC	4 cut(s)	109, 391, 658, 1190
PleI	GAGTC	1 cut(s)	1577
PluTI	GGCGCC	1 cut(s)	1770
PpsI	GAGTC	1 cut(s)	1577
Ppu21I	YACGTR	1 cut(s)	2113
PscI	ACATGT	1 cut(s)	2160
PshBI	ATTAAT	1 cut(s)	522
Psp124BI	GAGCTC	2 cut(s)	898, 1395
Psp1406I	AACGTT	1 cut(s)	1908
Psp6I	CCWGG	2 cut(s)	555, 972
PspFI	CCCAGC	1 cut(s)	186
PspGI	CCWGG	2 cut(s)	555, 972
PspN4I	GGNNCC	3 cut(s)	1768, 1859, 1860
PspOMI	GGGCCC	1 cut(s)	1858
PspPI	GGNCC	8 cut(s)	263, 793, 920, 953, 1755, 1858, 1859, 2036
PstI	CTGCAG	1 cut(s)	112
PsuI	RGATCY	1 cut(s)	2318
PsyI	GACNNNGTC	1 cut(s)	1567
PvuII	CAGCTG	1 cut(s)	1436
RsaI	GTAC	6 cut(s)	305, 1325, 1343, 1368, 1628, 1685
RsaNI	GTAC	6 cut(s)	304, 1324, 1342, 1367, 1627, 1684
RseI	CAYNNNNRTG	2 cut(s)	75, 2184
SacI	GAGCTC	2 cut(s)	898, 1395
SalI	GTCGAC	1 cut(s)	967
SapI	GCTCTTC	1 cut(s)	197
SaqAI	TTAA	8 cut(s)	123, 285, 522, 846, 1611, 1773, 2072, 2220
SatI	GCNGC	4 cut(s)	108, 390, 657, 1189
Sau3AI	GATC	6 cut(s)	1038, 1224, 1278, 1823, 2172, 2318
Sau96I	GGNCC	8 cut(s)	263, 793, 920, 953, 1755, 1858, 1859, 2036
SchI	GAGTC	1 cut(s)	1577
ScrFI	CCNGG	5 cut(s)	557, 796, 974, 1856, 2267
SduI	GDGCHC	5 cut(s)	898, 1121, 1395, 1862, 2181
SfaNI	GCATC	6 cut(s)	88, 394, 1060, 1150, 1419, 2306
SfcI	CTRYAG	2 cut(s)	108, 1141
SfoI	GGCGCC	1 cut(s)	1768
SgrAI	CRCCGGYG	1 cut(s)	13
SinI	GGWCC	5 cut(s)	263, 920, 953, 1755, 2036
SmiMI	CAYNNNNRTG	2 cut(s)	75, 2184
SmlI	CTYRAG	2 cut(s)	1394, 2071
SmoI	CTYRAG	2 cut(s)	1394, 2071
SpeI	ACTAGT	1 cut(s)	1081
SphI	GCATGC	1 cut(s)	1555
SseBI	AGGCCT	1 cut(s)	437
SspDI	GGCGCC	1 cut(s)	1766
SspMI	CTAG	8 cut(s)	95, 662, 1082, 1338, 1370, 1709, 1817, 1847
SstI	GAGCTC	2 cut(s)	898, 1395
StuI	AGGCCT	1 cut(s)	437
StyD4I	CCNGG	5 cut(s)	555, 794, 972, 1854, 2265
StyI	CCWWGG	1 cut(s)	882
TaaI	ACNGT	9 cut(s)	493, 1020, 1300, 1631, 1759, 1792, 1902, 1999, 2155
TaiI	ACGT	6 cut(s)	1368, 1431, 1497, 1596, 1911, 2115
TaqI	TCGA	3 cut(s)	968, 1068, 1334
TatI	WGTACW	1 cut(s)	1323
TfiI	GAWTC	2 cut(s)	252, 685
Tru1I	TTAA	8 cut(s)	123, 285, 522, 846, 1611, 1773, 2072, 2220
Tru9I	TTAA	8 cut(s)	123, 285, 522, 846, 1611, 1773, 2072, 2220
TscAI	CASTG	5 cut(s)	399, 451, 1023, 1757, 2028
TseFI	GTSAC	4 cut(s)	668, 1024, 1631, 2285
TseI	GCWGC	4 cut(s)	107, 389, 656, 1188
Tsp45I	GTSAC	4 cut(s)	668, 1024, 1631, 2285
TspDTI	ATGAA	5 cut(s)	59, 982, 1000, 1168, 1994
TspGWI	ACGGA	4 cut(s)	605, 1266, 1825, 2138
TspRI	CASTG	5 cut(s)	399, 451, 1023, 1757, 2028
Tth111I	GACNNNGTC	1 cut(s)	1567
Vha464I	CTTAAG	1 cut(s)	2071
VneI	GTGCAC	1 cut(s)	2177
VpaK11BI	GGWCC	5 cut(s)	263, 920, 953, 1755, 2036
VspI	ATTAAT	1 cut(s)	522
XapI	RAATTY	3 cut(s)	1109, 1146, 1254
XbaI	TCTAGA	1 cut(s)	1816
XceI	RCATGY	4 cut(s)	676, 1555, 2164, 2293
XmiI	GTMKAC	1 cut(s)	968
XspI	CTAG	8 cut(s)	95, 662, 1082, 1338, 1370, 1709, 1817, 1847
ZraI	GACGTC	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.