Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001192

Physical Location & Seq

Genomic Coordinates Reverse (-)

12889423 .. 12892515

Gene Structure 3093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g14610.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGCGGGGATGATCGGAAACAAAACATCGCTGCAATCTCAAGTGTGCATCGATTTACCTCCCAATGTACATTCACAGGGCATCATAGTAGGTCTAAATAAAAACGGTCCAGGAATGAACTTTAGTCTTCCGGTATTAGAGACGCAGATCATCCTCATTTTCGCCTTCACCCAAGCCTTCCATTTGATTTTGAAGAAGTTTGGAATTCCCAAGTTCACCAGCGAGATTCTTACGGGTATAGTCTTAGGCCCTTCGCTGATAGGAGCCTCTAAGGCATTCAAGAAGGACATCTTTCCTCGTGACAGTCGAGCAATACTTGAAGTGCTGGGTGAAATTGGTTATGAACTCTTTTTGTTTCTAGTTGGAGTAAGGATGGACCTGGAATTGATAAGAAGAAGCGGCCGCAAAGTCTTCTTCACTGGTATTTTGTGCCTGTTGGCCCCTTTGATAACCGGTATGGTCCTCCAAAAACAGCTCATGTCCATGACCTCTGTGTTCAAGCTGACCAAAGCTCAAAAGTCTAAGCTTCCTTATACAACGACATCATATTGCATGACTTCGTCTCCCGTCATTGTTCTCCTTCTTGAAGAACTGAATATCCTAAATTCCGAAATCGGTCGACTAGCTGTGGCAGCATCATCAATCAGTGAATTATTCGGTACTTTGGTTATCTGGTTCTCTTCCGTATTGTACAGAATGGCAAAAGTGAAACCTGTGCATGAAACTTTACTAGTTTTCGGAGCAGTTGTCGGCGGCATACTAGTATTTCTGTTCATATTCCGACCAATAATGTTTTGGATCATCAGGCAGACACCGCAAAACAATCCTGTTAAGAAAAGCTATGTCAGTGCCATAATCGTGGTGTTACTTTTTGTGACGATAGTATCACATTATTACGGCCATACTTTTCATTTCATGATTTTCATTTTGGGTCTGTCTGTCCCGGCTGGACAACCTTTGGGATCAACTCTAGAAGAATTGCTCCATATCTTCATTTCTCAAGTGCTTCTACCGATTTATGTGACTGCATACACAATGAAGGCAGATTTTCGGTTGGTCGATTTTAGTGACCCGGCCACAATAATCACTGCTATCCTCTTCGTTTTCATTTTTCTGGCCAAACTTATAGGCACCATGGTTGCTCCACTGTATTATAAAATGCCCCTGAATGATGCATTTGTGCTTGCTCTCATTCTAAGCTCCAAAGGCCTTGTTCAAGTTTCCGTCTATACTCGATTCAAAGACGATCAGACTGCAAGTGACTCAATATTTGCTTTGACGCTTGCTAGCATTGTGGTGACTGCAACTCTTGTTCCCCTTATCGTGAAGCGCCTTTATGATCCTGCAAAGAAGTACACAGCCTACGGAAGAAGGGATATTATGCATTTGAAACCCACTGCTGAGCTCAAAATTGTTGCCTGCATTCACAGGTCAGGTAACATTCCTGCAATCATCAATCTACTTGATGCAGCATGCCCAACTAAAGAAAACCCCATTGATATCTATGTTCTTCACCTCATGGAATTAATTGGAAGAAGCTCCCCAGTTTTTATCTCCCACCAAATGCAGCAAAAGAGTATTTCCAATGCTTACTCGGACAATGTCGTTCTTTACTTCAATGAGTTTGTGAGAGAAAATCTTGGTGCTGTTACTTTAAACATATTCACAGCAATCTCTCGACCAAAATACATGCAAGAAGACATATGTACACTTGCAATGGACAAGCAAACATCCCTAATTGTGCTCCCGTTTCATCGAACATGGGCAATTGACGGGTCCATTGAGTCAGACGACAGTGCAATAAGGACACTAAATCGCAATGTACTCGAAAGAGCTCCTTGCTCTGTGGGAATCCTTGTGGACTGTGGCCATTTAGGACGGTCCGCATCTGTTGTGGCTTCGGGGCGATCATTTTCCATGGCTGTAATCTTCTTCGGTGGGCAAGATGATAGGGAGGCATTATCATTTGCAAAAAGAATGGCTAGTGACACGATGATTAGCTTAACTGTGATCCATGTAGTTGCCAAAAATAATGTTACCGGTGGGGAATGGGATAAAATACTTGATACTGAAATGTTGAAGGAGTTTAAACACAGTCAGAAGGGTGAAGGTTTTGCGATTTTTTTAGAGGAGGTGGTGAAAGATGGACCAGAAACAACAGTACTACTGAAGTCTATTGTGGATGAGCATGATCTGATTATAGTTGGGAGGAGGTTTCAGGTAGAGTGCCCTCAGACTGCAGGACTTGCAGAATGGAGTGACTTTCCCGAGCTAGGGACTATAGGAGACCTACTTGCATCACCTGATCTAAATTGTAAAGCTTCAATTCTAGTGATAAAACATCAACAACAGGTCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

787

Amino Acids

86.98

Weight (kDa)

8.48

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	56 - 443	9.3e-32	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	501 - 633	1.2e-16	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	637 - 781	6.2e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44900 AT5G22900
fragaria_vesca	FvH4_3g06341 FvH4_3g23050 FvH4_3g39831 FvH4_6g14510 FvH4_7g14610
malus_domestica	MD02G1295300.v1.1 MD03G1057300.v1.1 MD05G1291400.v1.1 MD10G1267300.v1.1 MD11G1059200.v1.1 MD14G1082300.v1.1
prunus_persica	Prupe.1G346300_v2.0.a1 Prupe.2G029000_v2.0.a1 Prupe.4G074200_v2.0.a1 Prupe.6G047400_v2.0.a1 Prupe.6G047500_v2.0.a1 Prupe.6G047600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0356111 RchiOBHm_Chr1g0356121 RchiOBHm_Chr4g0446581 RchiOBHm_Chr5g0071781
rosa_laevigata	RLG00000005649 RLG00000028106 RLG00000036246 RLG00000036247 RLG00000036248
rosa_multiflora	Rmu_sc0001113.1_g000009 Rmu_sc0002569.1_g000023 Rmu_sc0003229.1_g000013 Rmu_sc0036166.1_g000001 Rmu_ssc0000144.1_g000006
rosa_roxburghii	Rroxscaffold_1G00009380 Rroxscaffold_1G00009410 Rroxscaffold_4G00299800 Rroxscaffold_5G00386970
rosa_rugosa	Rorug04G0372400 Rorug05G0414600 Rorug05G0414700
rosa_samantha	Rh1AG262500 Rh1BG231000 Rh1CG245800 Rh4AG434100 Rh4BG443300 Rh4CG460600 Rh4DG442100 Rh5AG470700 Rh5BG490400 Rh5CG514400 Rh5DG501400 Rh5DG501600 Rh5DG501700
rosa_wichuraiana	Rw1G023190 Rw4G037110 Rw5G043740 Rw5G043750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1155
AccB1I	GGYRCC	1 cut(s)	1130
AccI	GTMKAC	1 cut(s)	619
AciI	CCGC	6 cut(s)	5, 399, 403, 753, 815, 1884
AclWI	GGATC	4 cut(s)	806, 970, 1334, 2005
AcoI	YGGCCR	5 cut(s)	400, 898, 1074, 1116, 1867
AcsI	RAATTY	2 cut(s)	204, 604
AcuI	CTGAAG	1 cut(s)	2189
AfaI	GTAC	7 cut(s)	69, 661, 692, 1355, 1708, 1824, 2163
AfiI	CCNNNNNNNGG	2 cut(s)	2273, 2274
AgeI	ACCGGT	2 cut(s)	452, 2039
AhlI	ACTAGT	2 cut(s)	730, 760
AjnI	CCWGG	2 cut(s)	109, 378
AloI	GAACNNNNNNTCC	2 cut(s)	582, 614
Alw21I	GWGCWC	3 cut(s)	1407, 1746, 1837
Alw26I	GTCTC	3 cut(s)	134, 567, 2280
AlwI	GGATC	4 cut(s)	806, 970, 1334, 2005
Ama87I	CYCGRG	1 cut(s)	2267
AoxI	GGCC	8 cut(s)	247, 400, 438, 898, 1074, 1116, 1207, 1867
ApeKI	GCWGC	4 cut(s)	31, 632, 1469, 1567
ApoI	RAATTY	2 cut(s)	204, 604
ArsI	GACNNNNNNTTYG	2 cut(s)	1253, 1285
AseI	ATTAAT	1 cut(s)	1526
AsiGI	ACCGGT	2 cut(s)	452, 2039
AspLEI	GCGC	1 cut(s)	1332
AspS9I	GGNCC	8 cut(s)	107, 248, 376, 439, 460, 1776, 1881, 2147
AsuC2I	CCSGG	2 cut(s)	944, 1073
AsuHPI	GGTGA	8 cut(s)	160, 208, 341, 1309, 1505, 2117, 2149, 2292
AsuNHI	GCTAGC	1 cut(s)	1286
AvaI	CYCGRG	1 cut(s)	2267
AvaII	GGWCC	6 cut(s)	107, 376, 460, 1776, 1881, 2147
BaeGI	GKGCMC	1 cut(s)	2231
BaeI	ACNNNNGTAYC	4 cut(s)	651, 684, 867, 900
BalI	TGGCCA	2 cut(s)	1118, 1869
BanI	GGYRCC	1 cut(s)	1130
BanII	GRGCYC	2 cut(s)	1407, 1837
BauI	CACGAG	1 cut(s)	297
BbsI	GAAGAC	3 cut(s)	119, 403, 1704
Bbv12I	GWGCWC	3 cut(s)	1407, 1746, 1837
BbvI	GCAGC	4 cut(s)	18, 644, 1481, 1579
BccI	CCATC	2 cut(s)	367, 2138
BceAI	ACGGC	1 cut(s)	913
BcgI	CGANNNNNNTGC	4 cut(s)	1235, 1269, 1807, 1841
BciT130I	CCWGG	2 cut(s)	111, 380
BcnI	CCSGG	2 cut(s)	944, 1073
BcoDI	GTCTC	3 cut(s)	134, 567, 2280
BcuI	ACTAGT	2 cut(s)	730, 760
BfaI	CTAG	9 cut(s)	359, 623, 731, 761, 971, 1287, 1983, 2273, 2330
BfmI	CTRYAG	2 cut(s)	2238, 2280
BfoI	RGCGCY	1 cut(s)	1333
BglI	GCCNNNNNGGC	1 cut(s)	272
BisI	GCNGC	7 cut(s)	32, 400, 403, 633, 754, 1470, 1568
BlpI	GCTNAGC	1 cut(s)	1401
BlsI	GCNGC	7 cut(s)	33, 401, 404, 634, 755, 1471, 1569
BmcAI	AGTACT	1 cut(s)	2163
Bme1390I	CCNGG	4 cut(s)	111, 380, 944, 1073
Bme18I	GGWCC	6 cut(s)	107, 376, 460, 1776, 1881, 2147
BmeT110I	CYCGRG	1 cut(s)	2267
BmgT120I	GGNCC	8 cut(s)	107, 248, 376, 439, 460, 1776, 1881, 2147
BmiI	GGNNCC	4 cut(s)	265, 441, 1132, 1777
BmrFI	CCNGG	4 cut(s)	111, 380, 944, 1073
BmrI	ACTGGG	1 cut(s)	1538
BmsI	GCATC	7 cut(s)	57, 90, 644, 1162, 1456, 1895, 2306
BmtI	GCTAGC	1 cut(s)	1290
BmuI	ACTGGG	1 cut(s)	1538
BpiI	GAAGAC	3 cut(s)	119, 403, 1704
Bpu1102I	GCTNAGC	1 cut(s)	1401
BpuEI	CTTGAG	2 cut(s)	24, 984
BpuMI	CCSGG	2 cut(s)	944, 1073
Bsa29I	ATCGAT	1 cut(s)	51
BsaI	GGTCTC	1 cut(s)	2280
BsaJI	CCNNGG	2 cut(s)	1134, 1917
BsaWI	WCCGGW	3 cut(s)	130, 452, 2039
BsaXI	ACNNNNNCTCC	4 cut(s)	547, 577, 732, 762
Bsc4I	CCNNNNNNNGG	2 cut(s)	2273, 2274
Bse118I	RCCGGY	2 cut(s)	452, 2039
Bse1I	ACTGG	2 cut(s)	424, 1544
Bse3DI	GCAATG	2 cut(s)	1722, 1825
BseBI	CCWGG	2 cut(s)	111, 380
BseCI	ATCGAT	1 cut(s)	51
BseDI	CCNNGG	2 cut(s)	1134, 1917
BseGI	GGATG	5 cut(s)	15, 150, 378, 1730, 2188
BseLI	CCNNNNNNNGG	2 cut(s)	2273, 2274
BseMI	GCAATG	2 cut(s)	1722, 1825
BseMII	CTCAG	2 cut(s)	1392, 2246
BseNI	ACTGG	2 cut(s)	424, 1544
BseRI	GAGGAG	2 cut(s)	2144, 2224
BseSI	GKGCMC	1 cut(s)	2231
BseX3I	CGGCCG	1 cut(s)	400
BseXI	GCAGC	4 cut(s)	18, 644, 1481, 1579
BseYI	CCCAGC	1 cut(s)	325
Bsh1285I	CGRYCG	2 cut(s)	403, 619
BshFI	GGCC	8 cut(s)	249, 402, 440, 900, 1076, 1118, 1209, 1869
BshNI	GGYRCC	1 cut(s)	1130
BshTI	ACCGGT	2 cut(s)	452, 2039
BshVI	ATCGAT	1 cut(s)	51
BsiEI	CGRYCG	2 cut(s)	403, 619
BsiHKAI	GWGCWC	3 cut(s)	1407, 1746, 1837
BsiHKCI	CYCGRG	1 cut(s)	2267
BsiSI	CCGG	5 cut(s)	131, 453, 944, 1073, 2040
BslFI	GGGAC	2 cut(s)	926, 2290
BslI	CCNNNNNNNGG	2 cut(s)	2273, 2274
BsmAI	GTCTC	3 cut(s)	134, 567, 2280
BsmBI	CGTCTC	2 cut(s)	134, 567
BsmFI	GGGAC	2 cut(s)	926, 2290
BsmI	GAATGC	2 cut(s)	275, 1422
BsnI	GGCC	8 cut(s)	249, 402, 440, 900, 1076, 1118, 1209, 1869
Bso31I	GGTCTC	1 cut(s)	2280
BsoBI	CYCGRG	1 cut(s)	2267
Bsp1286I	GDGCHC	4 cut(s)	1407, 1746, 1837, 2231
Bsp1407I	TGTACA	3 cut(s)	67, 690, 1706
Bsp1720I	GCTNAGC	1 cut(s)	1401
Bsp19I	CCATGG	2 cut(s)	1134, 1917
BspACI	CCGC	6 cut(s)	5, 399, 403, 753, 815, 1884
BspANI	GGCC	8 cut(s)	249, 402, 440, 900, 1076, 1118, 1209, 1869
BspCNI	CTCAG	2 cut(s)	1393, 2245
BspDI	ATCGAT	1 cut(s)	51
BspHI	TCATGA	1 cut(s)	915
BspLI	GGNNCC	4 cut(s)	265, 441, 1132, 1777
BspMAI	CTGCAG	1 cut(s)	2242
BspOI	GCTAGC	1 cut(s)	1290
BspPI	GGATC	4 cut(s)	806, 970, 1334, 2005
BspT107I	GGYRCC	1 cut(s)	1130
BspTNI	GGTCTC	1 cut(s)	2280
BsrDI	GCAATG	2 cut(s)	1722, 1825
BsrFI	RCCGGY	2 cut(s)	452, 2039
BsrGI	TGTACA	3 cut(s)	67, 690, 1706
BsrI	ACTGG	2 cut(s)	424, 1544
BssAI	RCCGGY	2 cut(s)	452, 2039
BssECI	CCNNGG	2 cut(s)	1134, 1917
BssSI	CACGAG	1 cut(s)	297
BssT1I	CCWWGG	2 cut(s)	1134, 1917
Bst2BI	CACGAG	1 cut(s)	297
Bst2UI	CCWGG	2 cut(s)	111, 380
Bst4CI	ACNGT	9 cut(s)	107, 305, 1149, 1796, 1865, 1881, 2008, 2096, 2161
Bst6I	CTCTTC	2 cut(s)	685, 1103
BstAPI	GCANNNNNTGC	1 cut(s)	2246
BstAUI	TGTACA	3 cut(s)	67, 690, 1706
BstC8I	GCNNGC	5 cut(s)	1185, 1284, 1288, 1420, 1474
BstDEI	CTNAG	6 cut(s)	244, 270, 522, 1196, 1401, 2232
BstDSI	CCRYGG	2 cut(s)	1134, 1917
BstF5I	GGATG	5 cut(s)	15, 150, 378, 1730, 2188
BstH2I	RGCGCY	1 cut(s)	1333
BstHHI	GCGC	1 cut(s)	1332
BstMAI	GTCTC	3 cut(s)	134, 567, 2280
BstMCI	CGRYCG	2 cut(s)	403, 619
BstMWI	GCNNNNNNNGC	5 cut(s)	272, 632, 814, 1206, 2246
BstNI	CCWGG	2 cut(s)	111, 380
BstNSI	RCATGY	2 cut(s)	1476, 1693
BstSCI	CCNGG	4 cut(s)	109, 378, 942, 1071
BstSFI	CTRYAG	2 cut(s)	2238, 2280
BstSLI	GKGCMC	1 cut(s)	2231
BstV1I	GCAGC	4 cut(s)	18, 644, 1481, 1579
BstV2I	GAAGAC	3 cut(s)	119, 403, 1704
BstXI	CCANNNNNNTGG	1 cut(s)	859
BstZI	CGGCCG	1 cut(s)	400
Bsu15I	ATCGAT	1 cut(s)	51
BsuRI	GGCC	8 cut(s)	249, 402, 440, 900, 1076, 1118, 1209, 1869
BsuTUI	ATCGAT	1 cut(s)	51
BtgI	CCRYGG	2 cut(s)	1134, 1917
BtgZI	GCGATG	1 cut(s)	12
BtsCI	GGATG	5 cut(s)	15, 150, 378, 1730, 2188
BtsI	GCAGTG	2 cut(s)	1086, 1395
BtsIMutI	CAGTG	7 cut(s)	417, 652, 853, 1086, 1145, 1395, 1801
Cac8I	GCNNGC	5 cut(s)	1185, 1284, 1288, 1420, 1474
CciI	TCATGA	1 cut(s)	915
CciNI	GCGGCCGC	1 cut(s)	400
CfoI	GCGC	1 cut(s)	1332
Cfr10I	RCCGGY	2 cut(s)	452, 2039
Cfr13I	GGNCC	8 cut(s)	107, 248, 376, 439, 460, 1776, 1881, 2147
ClaI	ATCGAT	1 cut(s)	51
CpoI	CGGWCCG	1 cut(s)	1881
CseI	GACGC	2 cut(s)	151, 1288
Csp6I	GTAC	7 cut(s)	68, 660, 691, 1354, 1707, 1823, 2162
CspAI	ACCGGT	2 cut(s)	452, 2039
CspI	CGGWCCG	1 cut(s)	1881
CviQI	GTAC	7 cut(s)	68, 660, 691, 1354, 1707, 1823, 2162
DdeI	CTNAG	6 cut(s)	244, 270, 522, 1196, 1401, 2232
DraI	TTTAAA	2 cut(s)	1656, 2089
EaeI	YGGCCR	5 cut(s)	400, 898, 1074, 1116, 1867
EagI	CGGCCG	1 cut(s)	400
Eam1104I	CTCTTC	2 cut(s)	685, 1103
EarI	CTCTTC	2 cut(s)	685, 1103
Ecl136II	GAGCTC	2 cut(s)	1405, 1835
EclXI	CGGCCG	1 cut(s)	400
Eco130I	CCWWGG	2 cut(s)	1134, 1917
Eco147I	AGGCCT	1 cut(s)	1209
Eco24I	GRGCYC	2 cut(s)	1407, 1837
Eco31I	GGTCTC	1 cut(s)	2280
Eco32I	GATATC	1 cut(s)	1501
Eco47I	GGWCC	6 cut(s)	107, 376, 460, 1776, 1881, 2147
Eco52I	CGGCCG	1 cut(s)	400
Eco53kI	GAGCTC	2 cut(s)	1405, 1835
Eco57I	CTGAAG	1 cut(s)	2189
Eco88I	CYCGRG	1 cut(s)	2267
EcoICRI	GAGCTC	2 cut(s)	1405, 1835
EcoO109I	RGGNCCY	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	204
EcoRII	CCWGG	2 cut(s)	109, 378
EcoRV	GATATC	1 cut(s)	1501
EcoT14I	CCWWGG	2 cut(s)	1134, 1917
EcoT22I	ATGCAT	2 cut(s)	1177, 1386
EcoT38I	GRGCYC	2 cut(s)	1407, 1837
ErhI	CCWWGG	2 cut(s)	1134, 1917
Esp3I	CGTCTC	2 cut(s)	134, 567
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 1822, 1854
FaqI	GGGAC	2 cut(s)	926, 2290
FauNDI	CATATG	1 cut(s)	1703
FblI	GTMKAC	1 cut(s)	619
Fnu4HI	GCNGC	7 cut(s)	32, 400, 403, 633, 754, 1470, 1568
FokI	GGATG	5 cut(s)	22, 137, 385, 1717, 2195
FriOI	GRGCYC	2 cut(s)	1407, 1837
Fsp4HI	GCNGC	7 cut(s)	32, 400, 403, 633, 754, 1470, 1568
FspBI	CTAG	9 cut(s)	359, 623, 731, 761, 971, 1287, 1983, 2273, 2330
GlaI	GCGC	1 cut(s)	1331
GluI	GCNGC	7 cut(s)	32, 400, 403, 633, 754, 1470, 1568
GsaI	CCCAGC	1 cut(s)	329
HaeII	RGCGCY	1 cut(s)	1333
HaeIII	GGCC	8 cut(s)	249, 402, 440, 900, 1076, 1118, 1209, 1869
HapII	CCGG	5 cut(s)	131, 453, 944, 1073, 2040
HgaI	GACGC	2 cut(s)	151, 1288
HhaI	GCGC	1 cut(s)	1332
Hin6I	GCGC	1 cut(s)	1330
HinP1I	GCGC	1 cut(s)	1330
HincII	GTYRAC	1 cut(s)	620
HindII	GTYRAC	1 cut(s)	620
HindIII	AAGCTT	2 cut(s)	524, 2319
HinfI	GANTC	5 cut(s)	226, 1236, 1262, 1784, 1851
HpaII	CCGG	5 cut(s)	131, 453, 944, 1073, 2040
HphI	GGTGA	8 cut(s)	160, 208, 341, 1309, 1505, 2117, 2149, 2292
Hpy166II	GTNNAC	5 cut(s)	216, 620, 1356, 1709, 1861
Hpy188III	TCNNGA	8 cut(s)	280, 299, 584, 916, 971, 1324, 1677, 2267
Hpy8I	GTNNAC	5 cut(s)	216, 620, 1356, 1709, 1861
HpyCH4III	ACNGT	9 cut(s)	107, 305, 1149, 1796, 1865, 1881, 2008, 2096, 2161
HpyF10VI	GCNNNNNNNGC	5 cut(s)	272, 632, 814, 1206, 2246
HpyF3I	CTNAG	6 cut(s)	244, 270, 522, 1196, 1401, 2232
HspAI	GCGC	1 cut(s)	1330
LmnI	GCTCC	8 cut(s)	263, 740, 987, 1147, 1205, 1544, 1749, 1840
Lsp1109I	GCAGC	4 cut(s)	18, 644, 1481, 1579
LweI	GCATC	7 cut(s)	57, 90, 644, 1162, 1456, 1895, 2306
MaeI	CTAG	9 cut(s)	359, 623, 731, 761, 971, 1287, 1983, 2273, 2330
MfeI	CAATTG	1 cut(s)	1767
MhlI	GDGCHC	4 cut(s)	1407, 1746, 1837, 2231
MlsI	TGGCCA	2 cut(s)	1118, 1869
MluNI	TGGCCA	2 cut(s)	1118, 1869
MlyI	GAGTC	2 cut(s)	1256, 1793
MmeI	TCCRAC	2 cut(s)	343, 805
Mox20I	TGGCCA	2 cut(s)	1118, 1869
Mph1103I	ATGCAT	2 cut(s)	1177, 1386
MscI	TGGCCA	2 cut(s)	1118, 1869
MseI	TTAA	6 cut(s)	831, 1526, 1655, 2003, 2088, 2359
MslI	CAYNNNNRTG	3 cut(s)	482, 857, 1295
Msp20I	TGGCCA	2 cut(s)	1118, 1869
MspI	CCGG	5 cut(s)	131, 453, 944, 1073, 2040
MspR9I	CCNGG	4 cut(s)	111, 380, 944, 1073
MssI	GTTTAAAC	1 cut(s)	2089
MunI	CAATTG	1 cut(s)	1767
Mva1269I	GAATGC	2 cut(s)	275, 1422
MvaI	CCWGG	2 cut(s)	111, 380
MwoI	GCNNNNNNNGC	5 cut(s)	272, 632, 814, 1206, 2246
NciI	CCSGG	2 cut(s)	944, 1073
NcoI	CCATGG	2 cut(s)	1134, 1917
NdeI	CATATG	1 cut(s)	1703
NheI	GCTAGC	1 cut(s)	1286
NlaIV	GGNNCC	4 cut(s)	265, 441, 1132, 1777
NmuCI	GTSAC	9 cut(s)	299, 874, 1021, 1067, 1259, 1297, 1985, 2258, 2353
NotI	GCGGCCGC	1 cut(s)	400
NsiI	ATGCAT	2 cut(s)	1177, 1386
NspI	RCATGY	2 cut(s)	1476, 1693
PaeI	GCATGC	1 cut(s)	1476
PagI	TCATGA	1 cut(s)	915
PceI	AGGCCT	1 cut(s)	1209
PcsI	WCGNNNNNNNCGW	1 cut(s)	304
PctI	GAATGC	2 cut(s)	275, 1422
PfeI	GAWTC	3 cut(s)	226, 1236, 1851
PflFI	GACNNNGTC	2 cut(s)	559, 1601
PfoI	TCCNGGA	1 cut(s)	109
PinAI	ACCGGT	2 cut(s)	452, 2039
PkrI	GCNGC	7 cut(s)	33, 401, 404, 634, 755, 1471, 1569
PleI	GAGTC	2 cut(s)	1256, 1792
PmeI	GTTTAAAC	1 cut(s)	2089
PpsI	GAGTC	2 cut(s)	1256, 1792
PshBI	ATTAAT	1 cut(s)	1526
PsiI	TTATAA	1 cut(s)	1155
Psp124BI	GAGCTC	2 cut(s)	1407, 1837
Psp6I	CCWGG	2 cut(s)	109, 378
PspFI	CCCAGC	1 cut(s)	325
PspGI	CCWGG	2 cut(s)	109, 378
PspN4I	GGNNCC	4 cut(s)	265, 441, 1132, 1777
PspPI	GGNCC	8 cut(s)	107, 248, 376, 439, 460, 1776, 1881, 2147
PstI	CTGCAG	1 cut(s)	2242
PsyI	GACNNNGTC	2 cut(s)	559, 1601
RsaI	GTAC	7 cut(s)	69, 661, 692, 1355, 1708, 1824, 2163
RsaNI	GTAC	7 cut(s)	68, 660, 691, 1354, 1707, 1823, 2162
RseI	CAYNNNNRTG	3 cut(s)	482, 857, 1295
Rsr2I	CGGWCCG	1 cut(s)	1881
RsrII	CGGWCCG	1 cut(s)	1881
SacI	GAGCTC	2 cut(s)	1407, 1837
SalI	GTCGAC	1 cut(s)	618
SaqAI	TTAA	6 cut(s)	831, 1526, 1655, 2003, 2088, 2359
SatI	GCNGC	7 cut(s)	32, 400, 403, 633, 754, 1470, 1568
Sau96I	GGNCC	8 cut(s)	107, 248, 376, 439, 460, 1776, 1881, 2147
ScaI	AGTACT	1 cut(s)	2163
SchI	GAGTC	2 cut(s)	1256, 1793
ScrFI	CCNGG	4 cut(s)	111, 380, 944, 1073
SduI	GDGCHC	4 cut(s)	1407, 1746, 1837, 2231
SfaNI	GCATC	7 cut(s)	57, 90, 644, 1162, 1456, 1895, 2306
SfcI	CTRYAG	2 cut(s)	2238, 2280
SinI	GGWCC	6 cut(s)	107, 376, 460, 1776, 1881, 2147
SmiMI	CAYNNNNRTG	3 cut(s)	482, 857, 1295
SmlI	CTYRAG	2 cut(s)	39, 999
SmoI	CTYRAG	2 cut(s)	39, 999
SpeI	ACTAGT	2 cut(s)	730, 760
SphI	GCATGC	1 cut(s)	1476
SseBI	AGGCCT	1 cut(s)	1209
SsiI	CCGC	6 cut(s)	5, 399, 403, 753, 815, 1884
SspI	AATATT	1 cut(s)	1269
SspMI	CTAG	9 cut(s)	359, 623, 731, 761, 971, 1287, 1983, 2273, 2330
SstI	GAGCTC	2 cut(s)	1407, 1837
StuI	AGGCCT	1 cut(s)	1209
StyD4I	CCNGG	4 cut(s)	109, 378, 942, 1071
StyI	CCWWGG	2 cut(s)	1134, 1917
TaaI	ACNGT	9 cut(s)	107, 305, 1149, 1796, 1865, 1881, 2008, 2096, 2161
TaqI	TCGA	8 cut(s)	51, 307, 619, 1059, 1234, 1678, 1756, 1827
TaqII	GACCGA	1 cut(s)	605
TatI	WGTACW	6 cut(s)	67, 690, 1353, 1706, 1822, 2161
TauI	GCSGC	3 cut(s)	402, 405, 756
TfiI	GAWTC	3 cut(s)	226, 1236, 1851
Tru1I	TTAA	6 cut(s)	831, 1526, 1655, 2003, 2088, 2359
Tru9I	TTAA	6 cut(s)	831, 1526, 1655, 2003, 2088, 2359
TscAI	CASTG	7 cut(s)	424, 652, 853, 1093, 1152, 1402, 1801
TseFI	GTSAC	9 cut(s)	299, 874, 1021, 1067, 1259, 1297, 1985, 2258, 2353
TseI	GCWGC	4 cut(s)	31, 632, 1469, 1567
Tsp45I	GTSAC	9 cut(s)	299, 874, 1021, 1067, 1259, 1297, 1985, 2258, 2353
TspGWI	ACGGA	3 cut(s)	673, 1213, 1380
TspRI	CASTG	7 cut(s)	424, 652, 853, 1093, 1152, 1402, 1801
Tth111I	GACNNNGTC	2 cut(s)	559, 1601
VpaK11BI	GGWCC	6 cut(s)	107, 376, 460, 1776, 1881, 2147
VspI	ATTAAT	1 cut(s)	1526
XapI	RAATTY	2 cut(s)	204, 604
XbaI	TCTAGA	1 cut(s)	970
XceI	RCATGY	2 cut(s)	1476, 1693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	792
XmiI	GTMKAC	1 cut(s)	619
XspI	CTAG	9 cut(s)	359, 623, 731, 761, 971, 1287, 1983, 2273, 2330
ZrmI	AGTACT	1 cut(s)	2163
Zsp2I	ATGCAT	2 cut(s)	1177, 1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.