MD02G1295300.v1.1

Cation H( ) antiporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
34987617 .. 34990402
2786 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1295300.v1.1.491

Sequence Viewer

Length: 2427 bp
ATGTCGAAAAATATTTCAAGTTTGGAGGAAGATGATGACATTGTGCTGCAGAATATCAATGAAAAGTTCTTCAATGTTTGCTTCAACTTACCACCAAATATGAACTTTCATGGTGTCTGGGAGGACGATCTCTCAAAAACTTCCGTGCCACCACGAGCACGTACTGATCAATTAGTGCCTCTTTTGGAGTTTCAGATGGTTGTGATTTTCATCATCACTCAAGCCACCCATCACCTTCTGTTCAAACATTATAGGCTCCCCAGGTTCATCTCACAAATTGTGACTGGCATACTGCTTGGACCTTCAATCAAAAGCAAGTTGGGAACATTCAAAGAGTCCTTGTTTCCACTCATCAGTCAAGATGTAATTGGCACGGCATCTGTGTTTGGTTACTGTCTGTTTATGTTTCTAATCGGTGTGAAAATGGATGTGGGATTGATAAGGAGAACAGGAAACAAAGCTTTAGCGATTGGTGTTTTGTCACTCGTAGTGCCCTTCGCATTCGGCTTTTCAATAGCAGCTGCTTGTGTATATTTTACCCACAGAGAACAAGACCTGGAGACGGTTTTTTTTGTAGCCGGCACACATTCTTTGACTTCATTTGCTGTCGTTTCTAGCCTTCTTGAAGACCTCAAACTCCTAAATTCAGAACTAGGTCGGTTGGGATTGTCTACTGCGCTAATCAGCGACATGCTAAACGTGATTATAACAAGTACTGCTACTTTTTTCAGAGTTTTCATGGGAACTGGCCAACCAAAATACAAAATCTTCACTGACATTGCATCACTTATTGGCTTTCTTCTCACGGTTGTGTTCATCATTCGTCCTGCCTTCTTTTGGATTGTGAGACATACACCTGCAGGCAAACCTGTTAAGGATGTATACCTTTACACCATCTTTGTACTGCTTATGCTTTCTGCTTTTCTTTCTCATGCTTTTGACCAAACCGCACTTTTCGGTGCATTTATTTTGGGATTAGCTGTTCCAGCCGGACCACCATTAGGCTCAGCTCTAGTGAAAATGCTGGATTGTGTCGCCAGTGGAGTTTTGGTGCCACTCTTTGTAACTGTATGTTCAATGAAGGCTGATCTTTCATTCGCAACATATGATGGTAAATTGTTAATGCTGGACGTAATCCTTCTGGTGGTAACTTTTGTGTCCAAAGTAATAGCGTGTTTTGTGCCAGCTTTGATTTGCAAGATGCCCTTCAATGATGCTCTTGCAATTGGTTTCATTATGAGTGCCAAAGGCATAGTTGAGCTGGCCTCCTATTCCTTATTCCATGACTTCAAGACCATTGATGACCAAACATTCGCTGTGTTGATCGTTAGTGTTCTGACTGTAGCAATACTTGTGCCAAGCATGGTGAATTACTTGTATGATCCTTCAAGGAAATACGCAGGCTACCAGAAAAGGAACATCATGGATTTGAAACCAAATTCTGAGCTCCGAATACTTGCATGCATTTACTCGCACTATGATGTCGCTCCTATCATCAACCTTCTTGATGTTTCATGTCCAACAGGAGGGAGTCCAATTTTTGTGAATGCCCTTCACCTTATTGAGCTAGTTGGTAGAGCCGCCCCTCTCTTTATTAACCACCATATTCATGAAAAGGTTGCATTTGACATTGCCTATAGTGAAAATGTTATCATCCCCTTCGACCAGTATCAACTGAACAATCAAGGTGCTGTGTTCGTGAACATATTTACAGCCATCTCTCCACCCAACATAATGCATGAGGATATATGCACACTTGGACTTGACAAACTTACATCCATTATACTACTTCCATTTCATCGAAAATTCTCCTTCGATGGAAGCATAGAGTCTGAGGACAATAATACAAGGGCACTCAATTGTAGTGTCCTTGATAGGGCTCCATGTTCAATAGGAATCATTGTTCACCGTGGCTATTTGAGACGTCCATCAGCATTGTATCGCATTGCCATGATCTTCTTAGGGGGTAGGGATGATAGGGAGGCCTTGACATTTGCAAAACGGGTCAGCAAAGACCCTGGGAGCTTCAGCCTAACAGTGGTACGATTAAATGCCGAGGATGATCACACAATGCCTGATTGGGATACAATTCTTGATAATGAGCTGTTGAAGGATTTTAAGCATAATGTAGGAAACGAGAATATTACATACATAGAAAAGACATCAAATGATTCTGTTCGAACAACAGGAATACTTCGGTCTCTGATGAATGAGTATGAGCTTATCATAGTTGGGAGAAGGAATGGCTTACAATCCCCTCAGACATTAGGTCTCTCAGAGTGGACTGAATTCCCGGAATTGGGGATCATTGGGGACCTGCTTGTTTCGTCAGATTTCAACAGCAAAGCTTCGATTTTTGTGGTACAACAGCAAAAGAAATTGAAGGGAAGGATAAATATAAGCAATGGCAATACTTTCAAGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

809

Amino Acids

89.71

Weight (kDa)

6.45

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 75 - 455 3.4e-39 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 515 - 639 1.1e-11 Plant cation/H(+) antiporter domain
CHX17_C PF23259 649 - 791 1.3e-09 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 707
AarI CACCTGC 1 cut(s) 865
AatII GACGTC 1 cut(s) 1927
Acc36I ACCTGC 2 cut(s) 865, 2325
AccB1I GGYRCC 1 cut(s) 1051
AccI GTMKAC 2 cut(s) 671, 882
AciI CCGC 2 cut(s) 948, 1581
AclWI GGATC 2 cut(s) 1376, 2312
AcoI YGGCCR 1 cut(s) 748
AcsI RAATTY 4 cut(s) 643, 1438, 1805, 2288
AcuI CTGAAG 1 cut(s) 2011
AcyI GRCGYC 1 cut(s) 1924
AfaI GTAC 5 cut(s) 163, 715, 903, 2043, 2364
AfiI CCNNNNNNNGG 9 cut(s) 562, 837, 1001, 1144, 1526, 1876, 2038, 2299, 2300
AhdI GACNNNNNGTC 1 cut(s) 2268
AjnI CCWGG 3 cut(s) 260, 555, 2017
AleI CACNNNNGTG 1 cut(s) 809
AloI GAACNNNNNNTCC 4 cut(s) 966, 998, 1887, 1919
Alw21I GWGCWC 2 cut(s) 160, 1449
Alw26I GTCTC 5 cut(s) 554, 841, 1915, 2205, 2276
AlwI GGATC 2 cut(s) 1376, 2312
AoxI GGCC 3 cut(s) 748, 1263, 1983
ApeKI GCWGC 3 cut(s) 46, 518, 521
ApoI RAATTY 4 cut(s) 643, 1438, 1805, 2288
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
AspLEI GCGC 1 cut(s) 679
AspS9I GGNCC 3 cut(s) 299, 992, 2314
AsuC2I CCSGG 1 cut(s) 2294
AsuHPI GGTGA 4 cut(s) 224, 1378, 1547, 1898
AsuII TTCGAA 1 cut(s) 2179
AvaII GGWCC 3 cut(s) 299, 992, 2314
BaeGI GKGCMC 2 cut(s) 495, 1855
BalI TGGCCA 1 cut(s) 750
BanI GGYRCC 1 cut(s) 1051
BanII GRGCYC 2 cut(s) 1449, 1882
BauI CACGAG 1 cut(s) 153
BbsI GAAGAC 1 cut(s) 633
Bbv12I GWGCWC 2 cut(s) 160, 1449
BbvI GCAGC 3 cut(s) 33, 508, 530
BccI CCATC 7 cut(s) 190, 237, 902, 1103, 1724, 1811, 1936
BceAI ACGGC 1 cut(s) 390
BciT130I CCWGG 3 cut(s) 262, 557, 2019
BciVI GTATCC 1 cut(s) 2077
BclI TGATCA 2 cut(s) 166, 2062
BcnI CCSGG 1 cut(s) 2294
BcoDI GTCTC 5 cut(s) 554, 841, 1915, 2205, 2276
BfaI CTAG 4 cut(s) 615, 653, 1013, 1568
BfmI CTRYAG 4 cut(s) 47, 858, 1341, 1636
BfuAI ACCTGC 2 cut(s) 865, 2325
BfuI GTATCC 1 cut(s) 2077
BisI GCNGC 4 cut(s) 47, 519, 522, 1581
BlpI GCTNAGC 1 cut(s) 1006
BlsI GCNGC 4 cut(s) 48, 520, 523, 1582
BmcAI AGTACT 1 cut(s) 715
Bme1390I CCNGG 4 cut(s) 262, 557, 2019, 2294
Bme18I GGWCC 3 cut(s) 299, 992, 2314
BmeRI GACNNNNNGTC 1 cut(s) 2268
BmgT120I GGNCC 3 cut(s) 299, 992, 2314
BmiI GGNNCC 4 cut(s) 257, 1053, 1881, 2315
BmrFI CCNGG 4 cut(s) 262, 557, 2019, 2294
BmsI GCATC 4 cut(s) 386, 791, 1191, 1204
BpiI GAAGAC 1 cut(s) 633
BplI GAGNNNNNCTC 2 cut(s) 1250, 1282
BpmI CTGGAG 1 cut(s) 578
Bpu1102I GCTNAGC 1 cut(s) 1006
Bpu14I TTCGAA 1 cut(s) 2179
BpuEI CTTGAG 1 cut(s) 204
BpuMI CCSGG 1 cut(s) 2294
BsaAI YACGTR 1 cut(s) 161
BsaBI GATNNNNATC 1 cut(s) 209
BsaHI GRCGYC 1 cut(s) 1924
BsaI GGTCTC 2 cut(s) 2205, 2276
BsaJI CCNNGG 5 cut(s) 260, 1909, 2017, 2018, 2055
BsaXI ACNNNNNCTCC 2 cut(s) 1035, 1065
Bsc4I CCNNNNNNNGG 9 cut(s) 562, 837, 1001, 1144, 1526, 1876, 2038, 2299, 2300
Bse118I RCCGGY 1 cut(s) 578
Bse1I ACTGG 4 cut(s) 289, 751, 1038, 1666
Bse3DI GCAATG 4 cut(s) 777, 1629, 1944, 2410
Bse8I GATNNNNATC 1 cut(s) 209
BseBI CCWGG 3 cut(s) 262, 557, 2019
BseDI CCNNGG 5 cut(s) 260, 1909, 2017, 2018, 2055
BseGI GGATG 6 cut(s) 433, 883, 1653, 1775, 1978, 2065
BseJI GATNNNNATC 1 cut(s) 209
BseLI CCNNNNNNNGG 9 cut(s) 562, 837, 1001, 1144, 1526, 1876, 2038, 2299, 2300
BseMI GCAATG 4 cut(s) 777, 1629, 1944, 2410
BseMII CTCAG 5 cut(s) 1020, 1434, 1824, 2273, 2289
BseNI ACTGG 4 cut(s) 289, 751, 1038, 1666
BseSI GKGCMC 2 cut(s) 495, 1855
BseXI GCAGC 3 cut(s) 33, 508, 530
BshFI GGCC 3 cut(s) 750, 1265, 1985
BshNI GGYRCC 1 cut(s) 1051
BsiHKAI GWGCWC 2 cut(s) 160, 1449
BsiSI CCGG 3 cut(s) 579, 990, 2294
BslFI GGGAC 1 cut(s) 2327
BslI CCNNNNNNNGG 9 cut(s) 562, 837, 1001, 1144, 1526, 1876, 2038, 2299, 2300
BsmAI GTCTC 5 cut(s) 554, 841, 1915, 2205, 2276
BsmBI CGTCTC 2 cut(s) 554, 1915
BsmFI GGGAC 1 cut(s) 2327
BsmI GAATGC 2 cut(s) 500, 1552
BsnI GGCC 3 cut(s) 750, 1265, 1985
Bso31I GGTCTC 2 cut(s) 2205, 2276
Bsp119I TTCGAA 1 cut(s) 2179
Bsp1286I GDGCHC 5 cut(s) 160, 495, 1449, 1855, 1882
Bsp143I GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
Bsp1720I GCTNAGC 1 cut(s) 1006
BspACI CCGC 2 cut(s) 948, 1581
BspANI GGCC 3 cut(s) 750, 1265, 1985
BspCNI CTCAG 5 cut(s) 1019, 1435, 1825, 2272, 2288
BspHI TCATGA 1 cut(s) 1609
BspLI GGNNCC 4 cut(s) 257, 1053, 1881, 2315
BspMAI CTGCAG 2 cut(s) 51, 862
BspMI ACCTGC 2 cut(s) 865, 2325
BspPI GGATC 2 cut(s) 1376, 2312
BspT104I TTCGAA 1 cut(s) 2179
BspT107I GGYRCC 1 cut(s) 1051
BspTNI GGTCTC 2 cut(s) 2205, 2276
BsrDI GCAATG 4 cut(s) 777, 1629, 1944, 2410
BsrFI RCCGGY 1 cut(s) 578
BsrI ACTGG 4 cut(s) 289, 751, 1038, 1666
BssAI RCCGGY 1 cut(s) 578
BssECI CCNNGG 5 cut(s) 260, 1909, 2017, 2018, 2055
BssMI GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
BssNAI GTATAC 1 cut(s) 883
BssNI GRCGYC 1 cut(s) 1924
BssSI CACGAG 1 cut(s) 153
Bst1107I GTATAC 1 cut(s) 883
Bst2BI CACGAG 1 cut(s) 153
Bst2UI CCWGG 3 cut(s) 262, 557, 2019
Bst4CI ACNGT 7 cut(s) 395, 565, 808, 1069, 1342, 1910, 2038
BstACI GRCGYC 1 cut(s) 1924
BstBAI YACGTR 1 cut(s) 161
BstBI TTCGAA 1 cut(s) 2179
BstC8I GCNNGC 6 cut(s) 580, 862, 1185, 1263, 1402, 1462
BstDEI CTNAG 6 cut(s) 1006, 1443, 1833, 1960, 2259, 2275
BstDSI CCRYGG 1 cut(s) 1909
BstF5I GGATG 6 cut(s) 433, 883, 1653, 1775, 1978, 2065
BstHHI GCGC 1 cut(s) 679
BstKTI GATC 8 cut(s) 130, 169, 1090, 1326, 1384, 1956, 2065, 2307
BstMAI GTCTC 5 cut(s) 554, 841, 1915, 2205, 2276
BstMBI GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
BstMWI GCNNNNNNNGC 1 cut(s) 986
BstNI CCWGG 3 cut(s) 262, 557, 2019
BstNSI RCATGY 2 cut(s) 694, 1464
BstSCI CCNGG 4 cut(s) 260, 555, 2017, 2292
BstSFI CTRYAG 4 cut(s) 47, 858, 1341, 1636
BstSLI GKGCMC 2 cut(s) 495, 1855
BstV1I GCAGC 3 cut(s) 33, 508, 530
BstV2I GAAGAC 1 cut(s) 633
BstZ17I GTATAC 1 cut(s) 883
BsuI GTATCC 1 cut(s) 2077
BsuRI GGCC 3 cut(s) 750, 1265, 1985
BtgI CCRYGG 1 cut(s) 1909
BtsCI GGATG 6 cut(s) 433, 883, 1653, 1775, 1978, 2065
BtsIMutI CAGTG 3 cut(s) 771, 1045, 2043
BveI ACCTGC 2 cut(s) 865, 2325
Cac8I GCNNGC 6 cut(s) 580, 862, 1185, 1263, 1402, 1462
CciI TCATGA 1 cut(s) 1609
CfoI GCGC 1 cut(s) 679
Cfr10I RCCGGY 1 cut(s) 578
Cfr13I GGNCC 3 cut(s) 299, 992, 2314
Csp6I GTAC 5 cut(s) 162, 714, 902, 2042, 2363
CviQI GTAC 5 cut(s) 162, 714, 902, 2042, 2363
DdeI CTNAG 6 cut(s) 1006, 1443, 1833, 1960, 2259, 2275
DpnI GATC 8 cut(s) 129, 168, 1089, 1325, 1383, 1955, 2064, 2306
DpnII GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
DriI GACNNNNNGTC 1 cut(s) 2268
EaeI YGGCCR 1 cut(s) 748
Eam1105I GACNNNNNGTC 1 cut(s) 2268
Ecl136II GAGCTC 1 cut(s) 1447
Eco147I AGGCCT 1 cut(s) 1985
Eco24I GRGCYC 2 cut(s) 1449, 1882
Eco31I GGTCTC 2 cut(s) 2205, 2276
Eco47I GGWCC 3 cut(s) 299, 992, 2314
Eco53kI GAGCTC 1 cut(s) 1447
Eco57I CTGAAG 1 cut(s) 2011
EcoICRI GAGCTC 1 cut(s) 1447
EcoO109I RGGNCCY 1 cut(s) 2314
EcoRI GAATTC 1 cut(s) 2288
EcoRII CCWGG 3 cut(s) 260, 555, 2017
EcoT22I ATGCAT 2 cut(s) 1466, 1740
EcoT38I GRGCYC 2 cut(s) 1449, 1882
Esp3I CGTCTC 2 cut(s) 554, 1915
FalI AAGNNNNNCTT 2 cut(s) 1190, 1222
FaqI GGGAC 1 cut(s) 2327
FauNDI CATATG 1 cut(s) 1105
FbaI TGATCA 2 cut(s) 166, 2062
FblI GTMKAC 2 cut(s) 671, 882
Fnu4HI GCNGC 4 cut(s) 47, 519, 522, 1581
FokI GGATG 6 cut(s) 440, 890, 1640, 1762, 1985, 2072
FriOI GRGCYC 2 cut(s) 1449, 1882
Fsp4HI GCNGC 4 cut(s) 47, 519, 522, 1581
FspBI CTAG 4 cut(s) 615, 653, 1013, 1568
GlaI GCGC 1 cut(s) 678
GluI GCNGC 4 cut(s) 47, 519, 522, 1581
GsuI CTGGAG 1 cut(s) 578
HaeIII GGCC 3 cut(s) 750, 1265, 1985
HapII CCGG 3 cut(s) 579, 990, 2294
HhaI GCGC 1 cut(s) 679
Hin1I GRCGYC 1 cut(s) 1924
Hin6I GCGC 1 cut(s) 677
HinP1I GCGC 1 cut(s) 677
HindIII AAGCTT 2 cut(s) 459, 2346
HinfI GANTC 5 cut(s) 335, 1531, 1829, 1896, 2171
HpaII CCGG 3 cut(s) 579, 990, 2294
HphI GGTGA 4 cut(s) 224, 1378, 1547, 1898
Hpy166II GTNNAC 5 cut(s) 672, 883, 1702, 1906, 2283
Hpy188III TCNNGA 7 cut(s) 359, 623, 1291, 1505, 1610, 1699, 2093
Hpy8I GTNNAC 5 cut(s) 672, 883, 1702, 1906, 2283
HpyCH4III ACNGT 7 cut(s) 395, 565, 808, 1069, 1342, 1910, 2038
HpyCH4IV ACGT 4 cut(s) 160, 699, 1131, 1924
HpyF10VI GCNNNNNNNGC 1 cut(s) 986
HpyF3I CTNAG 6 cut(s) 1006, 1443, 1833, 1960, 2259, 2275
HpySE526I ACGT 4 cut(s) 160, 699, 1131, 1924
Hsp92I GRCGYC 1 cut(s) 1924
HspAI GCGC 1 cut(s) 677
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Ksp22I TGATCA 2 cut(s) 166, 2062
Kzo9I GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
LmnI GCTCC 5 cut(s) 261, 1452, 1492, 1885, 2022
Lsp1109I GCAGC 3 cut(s) 33, 508, 530
LweI GCATC 4 cut(s) 386, 791, 1191, 1204
MaeI CTAG 4 cut(s) 615, 653, 1013, 1568
MaeII ACGT 4 cut(s) 160, 699, 1131, 1924
MaeIII GTNAC 5 cut(s) 280, 389, 480, 1063, 1147
MalI GATC 8 cut(s) 129, 168, 1089, 1325, 1383, 1955, 2064, 2306
MboI GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
MboII GAAGA 6 cut(s) 41, 61, 638, 760, 791, 1948
MfeI CAATTG 2 cut(s) 1224, 1858
MhlI GDGCHC 5 cut(s) 160, 495, 1449, 1855, 1882
MlsI TGGCCA 1 cut(s) 750
MluNI TGGCCA 1 cut(s) 750
MlyI GAGTC 3 cut(s) 344, 1540, 1838
MmeI TCCRAC 1 cut(s) 1544
Mox20I TGGCCA 1 cut(s) 750
Mph1103I ATGCAT 2 cut(s) 1466, 1740
MroNI GCCGGC 1 cut(s) 578
MscI TGGCCA 1 cut(s) 750
MseI TTAA 5 cut(s) 873, 1121, 1596, 2048, 2118
MslI CAYNNNNRTG 4 cut(s) 809, 1479, 1608, 1949
Msp20I TGGCCA 1 cut(s) 750
MspA1I CMGCKG 1 cut(s) 521
MspI CCGG 3 cut(s) 579, 990, 2294
MspR9I CCNGG 4 cut(s) 262, 557, 2019, 2294
MunI CAATTG 2 cut(s) 1224, 1858
Mva1269I GAATGC 2 cut(s) 500, 1552
MvaI CCWGG 3 cut(s) 262, 557, 2019
MwoI GCNNNNNNNGC 1 cut(s) 986
NaeI GCCGGC 1 cut(s) 580
NciI CCSGG 1 cut(s) 2294
NdeI CATATG 1 cut(s) 1105
NdeII GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
NgoMIV GCCGGC 1 cut(s) 578
NlaIV GGNNCC 4 cut(s) 257, 1053, 1881, 2315
NmeAIII GCCGAG 1 cut(s) 2080
NmuCI GTSAC 2 cut(s) 280, 480
NsiI ATGCAT 2 cut(s) 1466, 1740
NspI RCATGY 2 cut(s) 694, 1464
NspV TTCGAA 1 cut(s) 2179
OliI CACNNNNGTG 1 cut(s) 809
PaeI GCATGC 1 cut(s) 1464
PagI TCATGA 1 cut(s) 1609
PaqCI CACCTGC 1 cut(s) 865
PasI CCCWGGG 1 cut(s) 2018
PceI AGGCCT 1 cut(s) 1985
PctI GAATGC 2 cut(s) 500, 1552
PdiI GCCGGC 1 cut(s) 580
PfeI GAWTC 2 cut(s) 1896, 2171
PfoI TCCNGGA 1 cut(s) 2292
PkrI GCNGC 4 cut(s) 48, 520, 523, 1582
PleI GAGTC 3 cut(s) 343, 1539, 1837
PpsI GAGTC 3 cut(s) 343, 1539, 1837
Ppu21I YACGTR 1 cut(s) 161
PpuMI RGGWCCY 1 cut(s) 2314
PsiI TTATAA 1 cut(s) 707
Psp124BI GAGCTC 1 cut(s) 1449
Psp5II RGGWCCY 1 cut(s) 2314
Psp6I CCWGG 3 cut(s) 260, 555, 2017
PspGI CCWGG 3 cut(s) 260, 555, 2017
PspN4I GGNNCC 4 cut(s) 257, 1053, 1881, 2315
PspPI GGNCC 3 cut(s) 299, 992, 2314
PspPPI RGGWCCY 1 cut(s) 2314
PstI CTGCAG 2 cut(s) 51, 862
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 5 cut(s) 163, 715, 903, 2043, 2364
RsaNI GTAC 5 cut(s) 162, 714, 902, 2042, 2363
RseI CAYNNNNRTG 4 cut(s) 809, 1479, 1608, 1949
SacI GAGCTC 1 cut(s) 1449
SaqAI TTAA 5 cut(s) 873, 1121, 1596, 2048, 2118
SatI GCNGC 4 cut(s) 47, 519, 522, 1581
Sau3AI GATC 8 cut(s) 127, 166, 1087, 1323, 1381, 1953, 2062, 2304
Sau96I GGNCC 3 cut(s) 299, 992, 2314
SbfI CCTGCAGG 1 cut(s) 862
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 3 cut(s) 344, 1540, 1838
ScrFI CCNGG 4 cut(s) 262, 557, 2019, 2294
SdaI CCTGCAGG 1 cut(s) 862
SduI GDGCHC 5 cut(s) 160, 495, 1449, 1855, 1882
SfaNI GCATC 4 cut(s) 386, 791, 1191, 1204
SfcI CTRYAG 4 cut(s) 47, 858, 1341, 1636
SfuI TTCGAA 1 cut(s) 2179
SinI GGWCC 3 cut(s) 299, 992, 2314
SmiMI CAYNNNNRTG 4 cut(s) 809, 1479, 1608, 1949
SmlI CTYRAG 1 cut(s) 219
SmoI CTYRAG 1 cut(s) 219
SphI GCATGC 1 cut(s) 1464
Sse8387I CCTGCAGG 1 cut(s) 862
SseBI AGGCCT 1 cut(s) 1985
SsiI CCGC 2 cut(s) 948, 1581
SspI AATATT 2 cut(s) 13, 2143
SspMI CTAG 4 cut(s) 615, 653, 1013, 1568
SstI GAGCTC 1 cut(s) 1449
StuI AGGCCT 1 cut(s) 1985
StyD4I CCNGG 4 cut(s) 260, 555, 2017, 2292
TaaI ACNGT 7 cut(s) 395, 565, 808, 1069, 1342, 1910, 2038
TaiI ACGT 4 cut(s) 163, 702, 1134, 1927
TaqI TCGA 6 cut(s) 5, 1662, 1801, 1815, 2179, 2351
TaqII GACCGA 1 cut(s) 2187
TatI WGTACW 2 cut(s) 713, 901
TauI GCSGC 1 cut(s) 1583
TfiI GAWTC 2 cut(s) 1896, 2171
Tru1I TTAA 5 cut(s) 873, 1121, 1596, 2048, 2118
Tru9I TTAA 5 cut(s) 873, 1121, 1596, 2048, 2118
TscAI CASTG 3 cut(s) 778, 1045, 2043
TseFI GTSAC 2 cut(s) 280, 480
TseI GCWGC 3 cut(s) 46, 518, 521
Tsp45I GTSAC 2 cut(s) 280, 480
TspGWI ACGGA 1 cut(s) 133
TspRI CASTG 3 cut(s) 778, 1045, 2043
VpaK11BI GGWCC 3 cut(s) 299, 992, 2314
XapI RAATTY 4 cut(s) 643, 1438, 1805, 2288
XceI RCATGY 2 cut(s) 694, 1464
XcmI CCANNNNNNNNNTGG 1 cut(s) 1045
XmiI GTMKAC 2 cut(s) 671, 882
XspI CTAG 4 cut(s) 615, 653, 1013, 1568
ZraI GACGTC 1 cut(s) 1925
ZrmI AGTACT 1 cut(s) 715
Zsp2I ATGCAT 2 cut(s) 1466, 1740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.