Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001192

Physical Location & Seq

Genomic Coordinates Forward (+)

3409172 .. 3412075

Gene Structure 2904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G047500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGTCGTCCGGCAACCTAACATTACCCCAAGAGAATATTACTGAGTGTATTGAGTTCCCTCCTAACATACATTCGCCGGGCCTTTTCAAATACAAAACAGCTGCTGGGATACCATATACCCTTCCCAATCTAGAGCTGCAGATGGTCTTAGTTTTTTTCATGACGAAAGCCTTCTATTCCGTTTTGCGCTATCTTGGAGTTCCAAGATTCACCACCCAAATTATCAGCCAAGAAATACTTGGTGTGCTTTCTGAGTTTGGCTATGGACTCTTTATGTTTCTCATTGGAGTGAAAATGGATTTGGGAATGATAAACAGGACAGGGCAAAAGGCCCTGTGCAGCGGTATTGCATGCGTCCTCGTTCCTTTGGTAGTCGGTATGCTTGTCCAAACCAAGCTCACCTCTTCTTACTTTAAACTAACCGCCAACGAAATGTTCAAGCTTCCATTTATGACTGCAACACATTGTTTGACTCCCTTTCCGGTTGTTGCTTGCCTTCTTGAGGACCTCAACATCTTGAATTCAGAGATTGGGAGATTAGGCATGTCTGCAGCATTGGTCAGTGACATGTTTAGTGTGTTTCTGCTATTTCTGGGCACATTAGCTAAAATGGTAGAAGAGAGTTCTGCACGGAGGTCTATGTTGGGCATAGGATCCAGCATTGGCTATATCATCGTTGTTGTGGCCATACTCAGACCGGCAATGTATTGGGTGATCAGGCAGACCCCTGAAAACAGGCCTGTCAAGAAAGCCTATCTCAATATCATCATCATCGTTGTGCTTTCATCTGGGGTGCTTTCGCACATGTATGGCCAAGGTTTTCATTTTGGTCCCTTTATACTTGGTCTGGCTGTCCCAGCCGGACCACCATTGGGATCAGCCATTGAAGCCAACCTCGGTTTGTTCGTCTCTGATGTGCTTCTGCCCATCTTTGTGACTATAAGTTCCATGAGGACAGACTTTTTGTCGCTTAAATATTTTAAAACTGACGCATTCACGCACGTCAATGGAATCCTCATCCTCGTCGCTCTTGTGGCCAAATTCTTAGCCTCCATTGCTGCTCCATTGTACTGCAACATGGCCTTCAGTGATGCATTGGCAATTGCTTTCATTTTGAGTTGCAAAGGCATTGTCAACCTTGCCGCCTATACCAATTTCAGAGACAATCAGACCATCAATGACCCAACATTTGTTTTGGCAATTACTAGCGTATTAGTGACTGCAACTGTTGTACCGATCGCGGTGAATTTCCTATATGACCCTTCAAGGAAGTACGCAGGCTACCAGAGAAGGAATATGATGCATTTGAAACCCAATGCTGAACTCAAAATACTTGCCTGCATTCATAGGTCCACTAACATGCCTGCAGTCATCAATCTACTTGATGCAGCATGTCCATCTATAGAGCACCCCATTGGTGTTTATGTTCTTCACCTTATTGAATTAGTTGGCAGGGCCTCCCCTATTTTCATCTCCCACGAATTGCAGAAAAAAACTGTCTCCAATGTTTCATACTCAGACAATGTCATTCTTTACTTCAATCAGTTTGTAAGGGAAAATCTAGGGGCTGTTTCTCTAAGCCTCTTCACAACAATCTCTGCACCAAAATACATGCATGAAGACATATGCACCCTTGCATTGGACAAGGTTGTATCCTTAGTCGTGCTCCCATTTCACCGGACATGGTCTATTGACGGGTCAGTGGAGTCAGAAGACAACAACATCAGGACCCTAAATTGTAGTGTCCTAGATAGAGCCCCATGCTCTGTTGGAATTCTTGTAGACCGCGGCTATTTAGGCCGGTCCACCTCCATTGTAGCACCTCAGTCATCATTTTATGTGGCTATAGTCTTCTTGGGAGGTAAAGATGACCGGGAGGCATTAGCATTTGCCAAAAGAATGGCCAAGGACCCAACGATTAGCCTAACTGTGATTCGGCTTGTTTCCACGACTAATGAAGGTGTTGACTCGGATTGGGATAGTGTACTTGATGCAGAGGAGTTGAAGTGTTTTAGATATAATGATGTGGATGAGCGGTATGTGATGTACATGGAGGAAGCTGTGAAAGATGGGCCTCAGACAACTTTTTTACTGCGGTCTATTGCGGATAAGTATGACCTTATTATAGTAGGGAGAAGGTATGAGGTACACTCCTCTCAGACAGTAGGGCTTTCAGAATGGAGTGAATTTCCAGAGCTAGGGACTGTAGGGGATTTGCTTGCATCTCCAGATTTCAATTGTCGAGCTTCTATTCTGGTGGTACAGCAGCAAAGGATGATGAGACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

763

Amino Acids

84.16

Weight (kDa)

6.52

Isoelectric Point (pI)

47.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44900 AT5G22900
fragaria_vesca	FvH4_3g06341 FvH4_3g23050 FvH4_3g39831 FvH4_6g14510 FvH4_7g14610
malus_domestica	MD02G1295300.v1.1 MD03G1057300.v1.1 MD05G1291400.v1.1 MD10G1267300.v1.1 MD11G1059200.v1.1 MD14G1082300.v1.1
prunus_persica	Prupe.1G346300_v2.0.a1 Prupe.2G029000_v2.0.a1 Prupe.4G074200_v2.0.a1 Prupe.6G047400_v2.0.a1 Prupe.6G047500_v2.0.a1 Prupe.6G047600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0356111 RchiOBHm_Chr1g0356121 RchiOBHm_Chr4g0446581 RchiOBHm_Chr5g0071781
rosa_laevigata	RLG00000005649 RLG00000028106 RLG00000036246 RLG00000036247 RLG00000036248
rosa_multiflora	Rmu_sc0001113.1_g000009 Rmu_sc0002569.1_g000023 Rmu_sc0003229.1_g000013 Rmu_sc0036166.1_g000001 Rmu_ssc0000144.1_g000006
rosa_roxburghii	Rroxscaffold_1G00009380 Rroxscaffold_1G00009410 Rroxscaffold_4G00299800 Rroxscaffold_5G00386970
rosa_rugosa	Rorug04G0372400 Rorug05G0414600 Rorug05G0414700
rosa_samantha	Rh1AG262500 Rh1BG231000 Rh1CG245800 Rh4AG434100 Rh4BG443300 Rh4CG460600 Rh4DG442100 Rh5AG470700 Rh5BG490400 Rh5CG514400 Rh5DG501400 Rh5DG501600 Rh5DG501700
rosa_wichuraiana	Rw1G023190 Rw4G037110 Rw5G043740 Rw5G043750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	2035
AccI	GTMKAC	1 cut(s)	1782
AccII	CGCG	2 cut(s)	1241, 1788
AciI	CCGC	9 cut(s)	342, 423, 1143, 1241, 1786, 1788, 2035, 2095, 2105
AclWI	GGATC	3 cut(s)	648, 661, 883
AcoI	YGGCCR	4 cut(s)	684, 811, 1035, 1902
AcsI	RAATTY	5 cut(s)	520, 1040, 1246, 1773, 2186
AcuI	CTGAAG	1 cut(s)	1069
AfaI	GTAC	7 cut(s)	1070, 1233, 1274, 1986, 2048, 2148, 2262
AfiI	CCNNNNNNNGG	4 cut(s)	502, 872, 1639, 2198
AflIII	ACRYGT	2 cut(s)	567, 804
AhdI	GACNNNNNGTC	1 cut(s)	964
AjiI	CACGTC	1 cut(s)	1003
AjuI	GAANNNNNNNTTGG	4 cut(s)	284, 316, 419, 451
AluBI	AGCT	8 cut(s)	101, 136, 397, 442, 605, 2060, 2197, 2246
AluI	AGCT	8 cut(s)	101, 136, 397, 442, 605, 2060, 2197, 2246
Alw21I	GWGCWC	2 cut(s)	1410, 1668
Alw26I	GTCTC	4 cut(s)	913, 1155, 1504, 2275
AlwI	GGATC	3 cut(s)	648, 661, 883
AlwNI	CAGNNNCTG	1 cut(s)	104
ApeKI	GCWGC	7 cut(s)	101, 136, 339, 551, 1058, 1388, 2266
ApoI	RAATTY	5 cut(s)	520, 1040, 1246, 1773, 2186
ArsI	GACNNNNNNTTYG	6 cut(s)	946, 978, 1116, 1148, 1172, 1204
Asp700I	GAANNNNTTC	1 cut(s)	170
AspLEI	GCGC	1 cut(s)	189
AsuC2I	CCSGG	2 cut(s)	78, 1874
AsuHPI	GGTGA	6 cut(s)	202, 391, 724, 1255, 1424, 1667
AvaII	GGWCC	7 cut(s)	505, 830, 863, 1350, 1728, 1803, 1909
BaeGI	GKGCMC	1 cut(s)	599
BaeI	ACNNNNGTAYC	2 cut(s)	1215, 1248
BalI	TGGCCA	4 cut(s)	686, 813, 1037, 1904
BamHI	GGATCC	1 cut(s)	653
BanII	GRGCYC	1 cut(s)	1759
BbsI	GAAGAC	3 cut(s)	1626, 1719, 1843
Bbv12I	GWGCWC	2 cut(s)	1410, 1668
BbvI	GCAGC	7 cut(s)	88, 123, 351, 563, 1045, 1400, 2278
BccI	CCATC	5 cut(s)	136, 935, 1181, 1405, 2063
BciVI	GTATCC	2 cut(s)	102, 1663
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	2 cut(s)	78, 1874
BcoDI	GTCTC	4 cut(s)	913, 1155, 1504, 2275
BfaI	CTAG	5 cut(s)	131, 1206, 1562, 1748, 2198
BfmI	CTRYAG	6 cut(s)	137, 549, 1365, 1401, 1845, 2205
BfuI	GTATCC	2 cut(s)	102, 1663
BisI	GCNGC	9 cut(s)	102, 137, 340, 552, 1059, 1143, 1389, 1789, 2267
BlsI	GCNGC	9 cut(s)	103, 138, 341, 553, 1060, 1144, 1390, 1790, 2268
Bme1390I	CCNGG	2 cut(s)	78, 1874
Bme18I	GGWCC	7 cut(s)	505, 830, 863, 1350, 1728, 1803, 1909
BmeRI	GACNNNNNGTC	1 cut(s)	964
BmgBI	CACGTC	1 cut(s)	1003
BmiI	GGNNCC	4 cut(s)	655, 832, 1730, 1911
BmrFI	CCNGG	2 cut(s)	78, 1874
BmsI	GCATC	5 cut(s)	1081, 1290, 1375, 1981, 2231
BpiI	GAAGAC	3 cut(s)	1626, 1719, 1843
BplI	GAGNNNNNCTC	2 cut(s)	2135, 2167
BpmI	CTGGAG	1 cut(s)	2211
BpuEI	CTTGAG	1 cut(s)	521
BpuMI	CCSGG	2 cut(s)	78, 1874
BsaJI	CCNNGG	4 cut(s)	814, 895, 1786, 1905
BsaWI	WCCGGW	2 cut(s)	481, 1677
BsaXI	ACNNNNNCTCC	2 cut(s)	1991, 2021
Bsc4I	CCNNNNNNNGG	4 cut(s)	502, 872, 1639, 2198
Bse118I	RCCGGY	2 cut(s)	697, 1800
Bse3DI	GCAATG	2 cut(s)	708, 1053
BseDI	CCNNGG	4 cut(s)	814, 895, 1786, 1905
BseGI	GGATG	3 cut(s)	1017, 2035, 2280
BseLI	CCNNNNNNNGG	4 cut(s)	502, 872, 1639, 2198
BseMI	GCAATG	2 cut(s)	708, 1053
BseMII	CTCAG	7 cut(s)	33, 243, 706, 1530, 1838, 2090, 2171
BseRI	GAGGAG	2 cut(s)	2012, 2143
BseSI	GKGCMC	1 cut(s)	599
BseXI	GCAGC	7 cut(s)	88, 123, 351, 563, 1045, 1400, 2278
BseYI	CCCAGC	2 cut(s)	104, 856
BsgI	GTGCAG	3 cut(s)	358, 612, 1584
Bsh1236I	CGCG	2 cut(s)	1241, 1788
Bsh1285I	CGRYCG	1 cut(s)	1239
BsiEI	CGRYCG	1 cut(s)	1239
BsiHKAI	GWGCWC	2 cut(s)	1410, 1668
BsiSI	CCGG	8 cut(s)	9, 77, 482, 698, 861, 1678, 1801, 1873
BslFI	GGGAC	3 cut(s)	816, 839, 2215
BslI	CCNNNNNNNGG	4 cut(s)	502, 872, 1639, 2198
BsmAI	GTCTC	4 cut(s)	913, 1155, 1504, 2275
BsmBI	CGTCTC	1 cut(s)	913
BsmFI	GGGAC	3 cut(s)	816, 839, 2215
BsmI	GAATGC	2 cut(s)	992, 1341
Bsp1286I	GDGCHC	4 cut(s)	599, 1410, 1668, 1759
Bsp1407I	TGTACA	1 cut(s)	2046
Bsp143I	GATC	4 cut(s)	653, 714, 875, 1236
BspACI	CCGC	9 cut(s)	342, 423, 1143, 1241, 1786, 1788, 2035, 2095, 2105
BspCNI	CTCAG	7 cut(s)	34, 244, 705, 1529, 1837, 2089, 2170
BspFNI	CGCG	2 cut(s)	1241, 1788
BspHI	TCATGA	1 cut(s)	159
BspLI	GGNNCC	4 cut(s)	655, 832, 1730, 1911
BspMAI	CTGCAG	3 cut(s)	141, 553, 1369
BspPI	GGATC	3 cut(s)	648, 661, 883
BsrBI	CCGCTC	1 cut(s)	2035
BsrDI	GCAATG	2 cut(s)	708, 1053
BsrFI	RCCGGY	2 cut(s)	697, 1800
BsrGI	TGTACA	1 cut(s)	2046
BssAI	RCCGGY	2 cut(s)	697, 1800
BssECI	CCNNGG	4 cut(s)	814, 895, 1786, 1905
BssMI	GATC	4 cut(s)	653, 714, 875, 1236
BssT1I	CCWWGG	2 cut(s)	814, 1905
Bst4CI	ACNGT	5 cut(s)	1228, 1498, 1930, 2164, 2206
Bst6I	CTCTTC	3 cut(s)	409, 612, 1589
BstAUI	TGTACA	1 cut(s)	2046
BstC8I	GCNNGC	6 cut(s)	352, 493, 1279, 1339, 1365, 2220
BstDSI	CCRYGG	1 cut(s)	1786
BstENI	CCTNNNNNAGG	1 cut(s)	500
BstF5I	GGATG	3 cut(s)	1017, 2035, 2280
BstFNI	CGCG	2 cut(s)	1241, 1788
BstHHI	GCGC	1 cut(s)	189
BstKTI	GATC	4 cut(s)	656, 717, 878, 1239
BstMAI	GTCTC	4 cut(s)	913, 1155, 1504, 2275
BstMBI	GATC	4 cut(s)	653, 714, 875, 1236
BstMCI	CGRYCG	1 cut(s)	1239
BstMWI	GCNNNNNNNGC	5 cut(s)	857, 887, 1034, 1055, 1797
BstNSI	RCATGY	7 cut(s)	354, 547, 571, 808, 1363, 1395, 1615
BstSCI	CCNGG	2 cut(s)	76, 1872
BstSFI	CTRYAG	6 cut(s)	137, 549, 1365, 1401, 1845, 2205
BstSLI	GKGCMC	1 cut(s)	599
BstUI	CGCG	2 cut(s)	1241, 1788
BstV1I	GCAGC	7 cut(s)	88, 123, 351, 563, 1045, 1400, 2278
BstV2I	GAAGAC	3 cut(s)	1626, 1719, 1843
BstX2I	RGATCY	1 cut(s)	653
BstXI	CCANNNNNNTGG	1 cut(s)	1900
BstYI	RGATCY	1 cut(s)	653
BsuI	GTATCC	2 cut(s)	102, 1663
BtgI	CCRYGG	1 cut(s)	1786
BtrI	CACGTC	1 cut(s)	1003
BtsCI	GGATG	3 cut(s)	1017, 2035, 2280
BtsIMutI	CAGTG	3 cut(s)	568, 1093, 1707
Cac8I	GCNNGC	6 cut(s)	352, 493, 1279, 1339, 1365, 2220
CaiI	CAGNNNCTG	1 cut(s)	104
CciI	TCATGA	1 cut(s)	159
CfoI	GCGC	1 cut(s)	189
Cfr10I	RCCGGY	2 cut(s)	697, 1800
Cfr42I	CCGCGG	1 cut(s)	1789
CseI	GACGC	2 cut(s)	343, 998
Csp6I	GTAC	7 cut(s)	1069, 1232, 1273, 1985, 2047, 2147, 2261
CspCI	CAANNNNNGTGG	2 cut(s)	1795, 1830
CviQI	GTAC	7 cut(s)	1069, 1232, 1273, 1985, 2047, 2147, 2261
DpnI	GATC	4 cut(s)	655, 716, 877, 1238
DpnII	GATC	4 cut(s)	653, 714, 875, 1236
DraI	TTTAAA	2 cut(s)	415, 982
DriI	GACNNNNNGTC	1 cut(s)	964
EaeI	YGGCCR	4 cut(s)	684, 811, 1035, 1902
Eam1104I	CTCTTC	3 cut(s)	409, 612, 1589
Eam1105I	GACNNNNNGTC	1 cut(s)	964
EarI	CTCTTC	3 cut(s)	409, 612, 1589
Eco130I	CCWWGG	2 cut(s)	814, 1905
Eco147I	AGGCCT	1 cut(s)	739
Eco24I	GRGCYC	1 cut(s)	1759
Eco47I	GGWCC	7 cut(s)	505, 830, 863, 1350, 1728, 1803, 1909
Eco57I	CTGAAG	1 cut(s)	1069
EcoNI	CCTNNNNNAGG	1 cut(s)	500
EcoO109I	RGGNCCY	5 cut(s)	331, 505, 1455, 1728, 1909
EcoRI	GAATTC	2 cut(s)	520, 1773
EcoT14I	CCWWGG	2 cut(s)	814, 1905
EcoT22I	ATGCAT	3 cut(s)	1096, 1305, 1617
EcoT38I	GRGCYC	1 cut(s)	1759
ErhI	CCWWGG	2 cut(s)	814, 1905
Esp3I	CGTCTC	1 cut(s)	913
FalI	AAGNNNNNCTT	2 cut(s)	222, 254
FaqI	GGGAC	3 cut(s)	816, 839, 2215
FauNDI	CATATG	1 cut(s)	1625
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	1 cut(s)	1782
Fnu4HI	GCNGC	9 cut(s)	102, 137, 340, 552, 1059, 1143, 1389, 1789, 2267
FokI	GGATG	2 cut(s)	1004, 2042
FriOI	GRGCYC	1 cut(s)	1759
Fsp4HI	GCNGC	9 cut(s)	102, 137, 340, 552, 1059, 1143, 1389, 1789, 2267
FspBI	CTAG	5 cut(s)	131, 1206, 1562, 1748, 2198
GlaI	GCGC	1 cut(s)	188
GluI	GCNGC	9 cut(s)	102, 137, 340, 552, 1059, 1143, 1389, 1789, 2267
GsaI	CCCAGC	2 cut(s)	108, 860
GsuI	CTGGAG	1 cut(s)	2211
HapII	CCGG	8 cut(s)	9, 77, 482, 698, 861, 1678, 1801, 1873
HgaI	GACGC	2 cut(s)	343, 998
HhaI	GCGC	1 cut(s)	189
Hin6I	GCGC	1 cut(s)	187
HinP1I	GCGC	1 cut(s)	187
HincII	GTYRAC	2 cut(s)	1135, 1966
HindII	GTYRAC	2 cut(s)	1135, 1966
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	7 cut(s)	207, 267, 472, 1011, 1706, 1933, 1967
HpaII	CCGG	8 cut(s)	9, 77, 482, 698, 861, 1678, 1801, 1873
HphI	GGTGA	6 cut(s)	202, 391, 724, 1255, 1424, 1667
Hpy166II	GTNNAC	7 cut(s)	1135, 1353, 1783, 1806, 1966, 1985, 2149
Hpy188III	TCNNGA	8 cut(s)	131, 160, 500, 517, 745, 1726, 2192, 2228
Hpy8I	GTNNAC	7 cut(s)	1135, 1353, 1783, 1806, 1966, 1985, 2149
Hpy99I	CGWCG	1 cut(s)	1028
HpyAV	CCTTC	8 cut(s)	131, 181, 506, 1093, 1272, 1284, 1952, 2130
HpyCH4III	ACNGT	5 cut(s)	1228, 1498, 1930, 2164, 2206
HpyCH4IV	ACGT	1 cut(s)	1002
HpyF10VI	GCNNNNNNNGC	5 cut(s)	857, 887, 1034, 1055, 1797
HpySE526I	ACGT	1 cut(s)	1002
HspAI	GCGC	1 cut(s)	187
Ksp22I	TGATCA	1 cut(s)	714
KspI	CCGCGG	1 cut(s)	1789
Kzo9I	GATC	4 cut(s)	653, 714, 875, 1236
LmnI	GCTCC	2 cut(s)	1066, 1671
Lsp1109I	GCAGC	7 cut(s)	88, 123, 351, 563, 1045, 1400, 2278
LweI	GCATC	5 cut(s)	1081, 1290, 1375, 1981, 2231
MaeI	CTAG	5 cut(s)	131, 1206, 1562, 1748, 2198
MaeII	ACGT	1 cut(s)	1002
MaeIII	GTNAC	3 cut(s)	563, 934, 1216
MalI	GATC	4 cut(s)	655, 716, 877, 1238
MbiI	CCGCTC	1 cut(s)	2035
MboI	GATC	4 cut(s)	653, 714, 875, 1236
MboII	GAAGA	7 cut(s)	396, 629, 1421, 1576, 1631, 1724, 1843
MfeI	CAATTG	2 cut(s)	1101, 2236
MflI	RGATCY	1 cut(s)	653
MhlI	GDGCHC	4 cut(s)	599, 1410, 1668, 1759
MlsI	TGGCCA	4 cut(s)	686, 813, 1037, 1904
MluNI	TGGCCA	4 cut(s)	686, 813, 1037, 1904
MlyI	GAGTC	4 cut(s)	261, 466, 1715, 1961
MmeI	TCCRAC	1 cut(s)	1750
Mox20I	TGGCCA	4 cut(s)	686, 813, 1037, 1904
Mph1103I	ATGCAT	3 cut(s)	1096, 1305, 1617
MroXI	GAANNNNTTC	1 cut(s)	170
MscI	TGGCCA	4 cut(s)	686, 813, 1037, 1904
MseI	TTAA	3 cut(s)	414, 972, 981
MslI	CAYNNNNRTG	6 cut(s)	287, 776, 807, 932, 1005, 1358
Msp20I	TGGCCA	4 cut(s)	686, 813, 1037, 1904
MspA1I	CMGCKG	3 cut(s)	101, 342, 1788
MspI	CCGG	8 cut(s)	9, 77, 482, 698, 861, 1678, 1801, 1873
MspR9I	CCNGG	2 cut(s)	78, 1874
MunI	CAATTG	2 cut(s)	1101, 2236
Mva1269I	GAATGC	2 cut(s)	992, 1341
MvnI	CGCG	2 cut(s)	1241, 1788
MwoI	GCNNNNNNNGC	5 cut(s)	857, 887, 1034, 1055, 1797
NciI	CCSGG	2 cut(s)	78, 1874
NdeI	CATATG	1 cut(s)	1625
NdeII	GATC	4 cut(s)	653, 714, 875, 1236
NlaIV	GGNNCC	4 cut(s)	655, 832, 1730, 1911
NmuCI	GTSAC	3 cut(s)	563, 934, 1216
NsiI	ATGCAT	3 cut(s)	1096, 1305, 1617
NspI	RCATGY	7 cut(s)	354, 547, 571, 808, 1363, 1395, 1615
PaeI	GCATGC	1 cut(s)	354
PagI	TCATGA	1 cut(s)	159
PceI	AGGCCT	1 cut(s)	739
PciI	ACATGT	2 cut(s)	567, 804
PcsI	WCGNNNNNNNCGW	1 cut(s)	903
PctI	GAATGC	2 cut(s)	992, 1341
PdmI	GAANNNNTTC	1 cut(s)	170
PfeI	GAWTC	3 cut(s)	207, 1011, 1933
PflFI	GACNNNGTC	2 cut(s)	1523, 1684
PkrI	GCNGC	9 cut(s)	103, 138, 341, 553, 1060, 1144, 1390, 1790, 2268
Ple19I	CGATCG	1 cut(s)	1239
PleI	GAGTC	4 cut(s)	261, 466, 1714, 1961
PpsI	GAGTC	4 cut(s)	261, 466, 1714, 1961
PpuMI	RGGWCCY	3 cut(s)	505, 1728, 1909
PscI	ACATGT	2 cut(s)	567, 804
Psp5II	RGGWCCY	3 cut(s)	505, 1728, 1909
PspFI	CCCAGC	2 cut(s)	104, 856
PspN4I	GGNNCC	4 cut(s)	655, 832, 1730, 1911
PspPPI	RGGWCCY	3 cut(s)	505, 1728, 1909
PsrI	GAACNNNNNNTAC	2 cut(s)	1314, 1346
PstI	CTGCAG	3 cut(s)	141, 553, 1369
PstNI	CAGNNNCTG	1 cut(s)	104
PsuI	RGATCY	1 cut(s)	653
PsyI	GACNNNGTC	2 cut(s)	1523, 1684
PvuI	CGATCG	1 cut(s)	1239
PvuII	CAGCTG	1 cut(s)	101
RsaI	GTAC	7 cut(s)	1070, 1233, 1274, 1986, 2048, 2148, 2262
RsaNI	GTAC	7 cut(s)	1069, 1232, 1273, 1985, 2047, 2147, 2261
RseI	CAYNNNNRTG	6 cut(s)	287, 776, 807, 932, 1005, 1358
SacII	CCGCGG	1 cut(s)	1789
SaqAI	TTAA	3 cut(s)	414, 972, 981
SatI	GCNGC	9 cut(s)	102, 137, 340, 552, 1059, 1143, 1389, 1789, 2267
Sau3AI	GATC	4 cut(s)	653, 714, 875, 1236
SchI	GAGTC	4 cut(s)	261, 466, 1715, 1961
ScrFI	CCNGG	2 cut(s)	78, 1874
SduI	GDGCHC	4 cut(s)	599, 1410, 1668, 1759
SfaNI	GCATC	5 cut(s)	1081, 1290, 1375, 1981, 2231
SfcI	CTRYAG	6 cut(s)	137, 549, 1365, 1401, 1845, 2205
Sfr303I	CCGCGG	1 cut(s)	1789
SgrBI	CCGCGG	1 cut(s)	1789
SinI	GGWCC	7 cut(s)	505, 830, 863, 1350, 1728, 1803, 1909
SmiMI	CAYNNNNRTG	6 cut(s)	287, 776, 807, 932, 1005, 1358
SmlI	CTYRAG	1 cut(s)	500
SmoI	CTYRAG	1 cut(s)	500
SphI	GCATGC	1 cut(s)	354
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	9 cut(s)	342, 423, 1143, 1241, 1786, 1788, 2035, 2095, 2105
SspI	AATATT	2 cut(s)	37, 977
SspMI	CTAG	5 cut(s)	131, 1206, 1562, 1748, 2198
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	2 cut(s)	76, 1872
StyI	CCWWGG	2 cut(s)	814, 1905
TaaI	ACNGT	5 cut(s)	1228, 1498, 1930, 2164, 2206
TaiI	ACGT	1 cut(s)	1005
TaqI	TCGA	1 cut(s)	2242
TatI	WGTACW	3 cut(s)	1068, 1984, 2046
TauI	GCSGC	2 cut(s)	1145, 1791
TfiI	GAWTC	3 cut(s)	207, 1011, 1933
Tru1I	TTAA	3 cut(s)	414, 972, 981
Tru9I	TTAA	3 cut(s)	414, 972, 981
TscAI	CASTG	3 cut(s)	568, 1093, 1707
TseFI	GTSAC	3 cut(s)	563, 934, 1216
TseI	GCWGC	7 cut(s)	101, 136, 339, 551, 1058, 1388, 2266
Tsp45I	GTSAC	3 cut(s)	563, 934, 1216
TspDTI	ATGAA	9 cut(s)	148, 774, 812, 1099, 1334, 1459, 1500, 1632, 1971
TspGWI	ACGGA	2 cut(s)	169, 646
TspRI	CASTG	3 cut(s)	568, 1093, 1707
Tth111I	GACNNNGTC	2 cut(s)	1523, 1684
VpaK11BI	GGWCC	7 cut(s)	505, 830, 863, 1350, 1728, 1803, 1909
XagI	CCTNNNNNAGG	1 cut(s)	500
XapI	RAATTY	5 cut(s)	520, 1040, 1246, 1773, 2186
XbaI	TCTAGA	1 cut(s)	130
XceI	RCATGY	7 cut(s)	354, 547, 571, 808, 1363, 1395, 1615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	236
XmiI	GTMKAC	1 cut(s)	1782
XmnI	GAANNNNTTC	1 cut(s)	170
XspI	CTAG	5 cut(s)	131, 1206, 1562, 1748, 2198
Zsp2I	ATGCAT	3 cut(s)	1096, 1305, 1617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.