AT5G14930

sag101 sag101 (senescence-associated gene 101)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
4828499 .. 4830982
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14930.3

Sequence Viewer

Length: 396 bp
ATGGAGTCTTCTTCTTCACTAAAAGGTTCTGCACTTGGGAAGCTTGTGGTGACCTCTGGTCTCTTACATAGCTCATGGAGTAAGATCTTGGAGATACATAACCCACCTTATTCGAATCATGATCCAGGTCTACAAGTTTCAAAAAAAAAAAAAGATTCAGGTCTAGAATTTCAGATTCACCGAGAAGAGAAATTCACACTTGTGGTTTTTAGCGCACCACCGATCTGCAGAAGTAGTAGCTCTGATTCTACTCTTCTTCATGTGAAAGATAAAGAAAATCCTTTCCCATTCCTCTGCTCCGAGAACAACCCATCATTCTCTCTTCACACACCTGCTTTTAACCTTTTTACCTCTGCTTCTACTAGTCTCACTTACCTCAAATCAGAGGTAATTTAA

Protein Analysis

131

Amino Acids

14.42

Weight (kDa)

7.83

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 109 - 203 1.3e-13 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000388)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14930 AT5G14930 AT5G14930
fragaria_vesca FvH4_2g18461 FvH4_6g50160 FvH4_6g50160 FvH4_6g50160 FvH4_6g50162
malus_domestica MD01G1017800.v1.1 MD09G1038500.v1.1 MD09G1038700.v1.1 MD09G1039000.v1.1 MD09G1039700.v1.1 MD09G1039800.v1.1 MD17G1039600.v1.1 MD17G1039700.v1.1 MD17G1039800.v1.1 MD17G1039900.v1.1 MD17G1040000.v1.1
prunus_persica Prupe.2G019500_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279300_v2.0.a1
pyrus_communis pycom111g03070 pycom17g03570 pycom17g03580
rosa_chinensis RchiOBHm_Chr2g0170411 RchiOBHm_Chr2g0170431 RchiOBHm_Chr2g0170561 RchiOBHm_Chr6g0283951 RchiOBHm_Chr6g0283961 RchiOBHm_Chr6g0283981 RchiOBHm_Chr7g0219521 RchiOBHm_Chr7g0219541
rosa_laevigata RLG00000002285 RLG00000012782 RLG00000012784 RLG00000021954 RLG00000021955 RLG00000021956
rosa_multiflora Rmu_co8245087.1_g000001 Rmu_co8259259.1_g000001 Rmu_sc0003047.1_g000001 Rmu_sc0008697.1_g000004 Rmu_sc0009395.1_g000014 Rmu_sc0009395.1_g000016 Rmu_sc0009395.1_g000019 Rmu_sc0009395.1_g000026 Rmu_sc0009395.1_g000028 Rmu_sc0009395.1_g000040 Rmu_sc0021809.1_g000001 Rmu_ssc0000442.1_g000026 Rmu_ssc0000442.1_g000030
rosa_roxburghii Rroxscaffold_2G00081280 Rroxscaffold_2G00081290 Rroxscaffold_2G00081330 Rroxscaffold_3G00239990 Rroxscaffold_4G00294050 Rroxscaffold_4G00294070 Rroxscaffold_7G00185030
rosa_rugosa Rorug02G0548700 Rorug02G0548900 Rorug06G0158800 Rorug06G0158900 Rorug07G0186000
rosa_samantha Rh2AG620300 Rh2AG620500 Rh2AG620600 Rh2AG620700 Rh2BG631200 Rh2BG631400 Rh2BG631600 Rh2BG631700 Rh2CG601100 Rh2CG601200 Rh2CG601300 Rh2DG643900 Rh2DG644200 Rh2DG644400 Rh6AG272000 Rh6AG272300 Rh6BG272900 Rh6BG273000 Rh6CG274100 Rh6CG274200 Rh6DG267100 Rh6DG267200 Rh6DG267300 Rh7AG329500 Rh7AG329900 Rh7BG319400 Rh7BG319600 Rh7CG346800 Rh7CG347200 Rh7DG325400
rosa_wichuraiana Rw2G051410 Rw2G051430 Rw2G051440 Rw2G051450 Rw6G023440 Rw7G027780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 340
Acc36I ACCTGC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 130
AclWI GGATC 1 cut(s) 116
AcsI RAATTY 2 cut(s) 167, 191
AgsI TTSAA 1 cut(s) 141
AhdI GACNNNNNGTC 1 cut(s) 57
AhlI ACTAGT 1 cut(s) 362
AjnI CCWGG 1 cut(s) 124
AleI CACNNNNGTG 1 cut(s) 200
AluBI AGCT 3 cut(s) 43, 72, 240
AluI AGCT 3 cut(s) 43, 72, 240
Alw26I GTCTC 2 cut(s) 65, 371
AlwI GGATC 1 cut(s) 116
ApoI RAATTY 2 cut(s) 167, 191
AspLEI GCGC 1 cut(s) 215
AsuHPI GGTGA 2 cut(s) 61, 170
AsuII TTCGAA 1 cut(s) 113
BccI CCATC 1 cut(s) 319
BciT130I CCWGG 1 cut(s) 126
BcoDI GTCTC 2 cut(s) 65, 371
BcuI ACTAGT 1 cut(s) 362
BfaI CTAG 2 cut(s) 164, 363
BfmI CTRYAG 1 cut(s) 226
BfuAI ACCTGC 1 cut(s) 340
BglII AGATCT 1 cut(s) 84
Bme1390I CCNGG 1 cut(s) 126
BmeRI GACNNNNNGTC 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 126
Bpu14I TTCGAA 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 65
BseBI CCWGG 1 cut(s) 126
BsgI GTGCAG 1 cut(s) 15
BsmAI GTCTC 2 cut(s) 65, 371
Bso31I GGTCTC 1 cut(s) 65
Bsp119I TTCGAA 1 cut(s) 113
Bsp143I GATC 3 cut(s) 84, 121, 222
BspHI TCATGA 1 cut(s) 118
BspMAI CTGCAG 1 cut(s) 230
BspMI ACCTGC 1 cut(s) 340
BspPI GGATC 1 cut(s) 116
BspT104I TTCGAA 1 cut(s) 113
BspTNI GGTCTC 1 cut(s) 65
BssMI GATC 3 cut(s) 84, 121, 222
Bst2UI CCWGG 1 cut(s) 126
Bst6I CTCTTC 3 cut(s) 180, 258, 327
BstBI TTCGAA 1 cut(s) 113
BstEII GGTNACC 1 cut(s) 49
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 3 cut(s) 87, 124, 225
BstMAI GTCTC 2 cut(s) 65, 371
BstMBI GATC 3 cut(s) 84, 121, 222
BstNI CCWGG 1 cut(s) 126
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 1 cut(s) 124
BstSFI CTRYAG 1 cut(s) 226
BstX2I RGATCY 1 cut(s) 84
BstYI RGATCY 1 cut(s) 84
BveI ACCTGC 1 cut(s) 340
CciI TCATGA 1 cut(s) 118
CfoI GCGC 1 cut(s) 215
CviAII CATG 3 cut(s) 75, 119, 260
CviJI RGCY 3 cut(s) 43, 72, 240
CviKI_1 RGCY 3 cut(s) 43, 72, 240
DpnI GATC 3 cut(s) 86, 123, 224
DpnII GATC 3 cut(s) 84, 121, 222
DriI GACNNNNNGTC 1 cut(s) 57
Eam1104I CTCTTC 3 cut(s) 180, 258, 327
Eam1105I GACNNNNNGTC 1 cut(s) 57
EarI CTCTTC 3 cut(s) 180, 258, 327
Eco31I GGTCTC 1 cut(s) 65
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 124
FaeI CATG 3 cut(s) 78, 122, 263
FaiI YATR 5 cut(s) 69, 76, 99, 120, 261
FatI CATG 3 cut(s) 74, 118, 259
FblI GTMKAC 1 cut(s) 130
FspBI CTAG 2 cut(s) 164, 363
GlaI GCGC 1 cut(s) 214
HhaI GCGC 1 cut(s) 215
Hin1II CATG 3 cut(s) 78, 122, 263
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 5 cut(s) 5, 115, 155, 175, 245
HphI GGTGA 2 cut(s) 61, 170
Hpy166II GTNNAC 1 cut(s) 131
Hpy188I TCNGA 4 cut(s) 174, 244, 301, 385
Hpy188III TCNNGA 2 cut(s) 119, 164
Hpy8I GTNNAC 1 cut(s) 131
HpyCH4V TGCA 2 cut(s) 32, 228
Hsp92II CATG 3 cut(s) 78, 122, 263
HspAI GCGC 1 cut(s) 213
Kzo9I GATC 3 cut(s) 84, 121, 222
LmnI GCTCC 1 cut(s) 302
LpnPI CCDG 5 cut(s) 42, 111, 138, 144, 345
MaeI CTAG 2 cut(s) 164, 363
MaeIII GTNAC 1 cut(s) 49
MalI GATC 3 cut(s) 86, 123, 224
MboI GATC 3 cut(s) 84, 121, 222
MboII GAAGA 6 cut(s) 3, 6, 197, 245, 248, 314
MflI RGATCY 1 cut(s) 84
MluCI AATT 3 cut(s) 167, 191, 390
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 5 cut(s) 64, 302, 361, 379, 386
MseI TTAA 2 cut(s) 339, 394
MslI CAYNNNNRTG 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 126
MvaI CCWGG 1 cut(s) 126
NdeII GATC 3 cut(s) 84, 121, 222
NlaIII CATG 3 cut(s) 78, 122, 263
NmuCI GTSAC 1 cut(s) 49
NspV TTCGAA 1 cut(s) 113
OliI CACNNNNGTG 1 cut(s) 200
PagI TCATGA 1 cut(s) 118
PaqCI CACCTGC 1 cut(s) 340
PfeI GAWTC 4 cut(s) 115, 155, 175, 245
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 124
PspEI GGTNACC 1 cut(s) 49
PspGI CCWGG 1 cut(s) 124
PstI CTGCAG 1 cut(s) 230
PsuI RGATCY 1 cut(s) 84
RseI CAYNNNNRTG 1 cut(s) 200
SaqAI TTAA 2 cut(s) 339, 394
Sau3AI GATC 3 cut(s) 84, 121, 222
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 126
SfcI CTRYAG 1 cut(s) 226
SfuI TTCGAA 1 cut(s) 113
SmiMI CAYNNNNRTG 1 cut(s) 200
SpeI ACTAGT 1 cut(s) 362
Sse9I AATT 3 cut(s) 167, 191, 390
SspMI CTAG 2 cut(s) 164, 363
StyD4I CCNGG 1 cut(s) 124
TaqI TCGA 1 cut(s) 113
TasI AATT 3 cut(s) 167, 191, 390
TfiI GAWTC 4 cut(s) 115, 155, 175, 245
Tru1I TTAA 2 cut(s) 339, 394
Tru9I TTAA 2 cut(s) 339, 394
TseFI GTSAC 1 cut(s) 49
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 1 cut(s) 248
XapI RAATTY 2 cut(s) 167, 191
XbaI TCTAGA 1 cut(s) 163
XmiI GTMKAC 1 cut(s) 130
XspI CTAG 2 cut(s) 164, 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.