Rh2CG601300

Senescence-associated carboxylesterase 101-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000388
Physical Location & Seq
Reverse (-)
77661769 .. 77682043
20275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG601300.1

Sequence Viewer

Length: 1137 bp
ATGCCAGAAAGCTTTAAGATGCCCATAAAAAACCGGTTTAGCAGCGGCTTAGAATCGGGGAATCTTGTGGTGAACTCTGATCCAGTACACCAGGCATGGTGTGCTATTGAGCAACAAAGACAGATTAATCCAAATGCAGAGCCATCCTTGTACAATGAAATCCAACCAGAAAATCCAATCATCATAGCTTTTGGCACTCCACCTGGCTCTCTTCAGGGACAAGAAGGCTTGGTTTCATCAAAAGATTTTGCTCACTTTGAATTTTTGTGCAACAAAAGCAATCCAGTTTTCTGCATCAATGAAGCAGCAATCAAACTATTTCAGTCACATTATAGTGACCTCCTCGTTCTGAAAAATAAGCTGGTAGAGAATAGCAAGAGCAAACCCCCACCATTAATAATCATCACTGGACAATCTGTGGGAGGTAGTGTGGCTACACTCTTTACCTTATGGTTGCTACAAGGCCTCAACTTGTCAAAAACCAAACGCCCGCTTTGCATTACTTTCGGTTCTCCCCTTGTTGGCGATGAACACCTTCGAAAATGTGTGTTAGAATTCTCAGCTTGGAAATCTTGCTTCTTGCATATAGTCTCCGACCAGGATCATACACCTAAAATCTTTATGTCCCGAAATACAATTGGTGCTTATAAGCCGTTTGGAACATTCTTGTTATGCTCGGCTTTGGGTTGTGCTTGCTCTGAGGACCCGGATTTTGTTTTGGAACAATTTGCGACAACCAATTCTCACAGTGCTCAAACTCAAGATTGTAATTTGGGGTTCCCCTATGGACAAATTTTGGAGGATCTCAAGCGCATGGCATTATGTAATGTTTTCGAGTCCATTGGAGGGAAAACAGATCCACTTAAAGCTAGCATAATCACACAACTCATAGCAATCGGAGTAGTCTCACAGAATGGAGGACTAACTACTGATGACAAAAGGAAGTTGAAAGAGTTTGAGGACTACGTGTGGAATGCTCTCAAGAATTATGCAGTGTCACCTGAGATTTTCTTGGAGAAGAGTAGTTTTATGAAATGGTGGAATGAATATGAGGGAATTGTTGAAAGCTCCTCATTGCTCTTGGAATTCATGAAAAATGACGGTCCCAGGGAGTATGAGGCAGGGAAGTTCACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_3

Protein Analysis

378

Amino Acids

42.08

Weight (kDa)

5.6

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 98 - 208 1.4e-13 Lipase (class 3)
EDS1_EP PF18117 299 - 358 4.7e-14 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000388)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14930 AT5G14930 AT5G14930
fragaria_vesca FvH4_2g18461 FvH4_6g50160 FvH4_6g50160 FvH4_6g50160 FvH4_6g50162
malus_domestica MD01G1017800.v1.1 MD09G1038500.v1.1 MD09G1038700.v1.1 MD09G1039000.v1.1 MD09G1039700.v1.1 MD09G1039800.v1.1 MD17G1039600.v1.1 MD17G1039700.v1.1 MD17G1039800.v1.1 MD17G1039900.v1.1 MD17G1040000.v1.1
prunus_persica Prupe.2G019500_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279300_v2.0.a1
pyrus_communis pycom111g03070 pycom17g03570 pycom17g03580
rosa_chinensis RchiOBHm_Chr2g0170411 RchiOBHm_Chr2g0170431 RchiOBHm_Chr2g0170561 RchiOBHm_Chr6g0283951 RchiOBHm_Chr6g0283961 RchiOBHm_Chr6g0283981 RchiOBHm_Chr7g0219521 RchiOBHm_Chr7g0219541
rosa_laevigata RLG00000002285 RLG00000012782 RLG00000012784 RLG00000021954 RLG00000021955 RLG00000021956
rosa_multiflora Rmu_co8245087.1_g000001 Rmu_co8259259.1_g000001 Rmu_sc0003047.1_g000001 Rmu_sc0008697.1_g000004 Rmu_sc0009395.1_g000014 Rmu_sc0009395.1_g000016 Rmu_sc0009395.1_g000019 Rmu_sc0009395.1_g000026 Rmu_sc0009395.1_g000028 Rmu_sc0009395.1_g000040 Rmu_sc0021809.1_g000001 Rmu_ssc0000442.1_g000026 Rmu_ssc0000442.1_g000030
rosa_roxburghii Rroxscaffold_2G00081280 Rroxscaffold_2G00081290 Rroxscaffold_2G00081330 Rroxscaffold_3G00239990 Rroxscaffold_4G00294050 Rroxscaffold_4G00294070 Rroxscaffold_7G00185030
rosa_rugosa Rorug02G0548700 Rorug02G0548900 Rorug06G0158800 Rorug06G0158900 Rorug07G0186000
rosa_samantha Rh2AG620300 Rh2AG620500 Rh2AG620600 Rh2AG620700 Rh2BG631200 Rh2BG631400 Rh2BG631600 Rh2BG631700 Rh2CG601100 Rh2CG601200 Rh2CG601300 Rh2DG643900 Rh2DG644200 Rh2DG644400 Rh6AG272000 Rh6AG272300 Rh6BG272900 Rh6BG273000 Rh6CG274100 Rh6CG274200 Rh6DG267100 Rh6DG267200 Rh6DG267300 Rh7AG329500 Rh7AG329900 Rh7BG319400 Rh7BG319600 Rh7CG346800 Rh7CG347200 Rh7DG325400
rosa_wichuraiana Rw2G051410 Rw2G051430 Rw2G051440 Rw2G051450 Rw6G023440 Rw7G027780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AciI CCGC 2 cut(s) 45, 491
AclWI GGATC 4 cut(s) 74, 609, 810, 851
AcsI RAATTY 4 cut(s) 260, 554, 792, 1085
AcuI CTGAAG 1 cut(s) 197
AfaI GTAC 2 cut(s) 87, 152
AfiI CCNNNNNNNGG 2 cut(s) 521, 846
AflIII ACRYGT 1 cut(s) 966
AgeI ACCGGT 1 cut(s) 33
AgsI TTSAA 3 cut(s) 260, 949, 1064
AjnI CCWGG 4 cut(s) 90, 202, 597, 1106
AluBI AGCT 6 cut(s) 12, 188, 361, 563, 869, 1068
AluI AGCT 6 cut(s) 12, 188, 361, 563, 869, 1068
Alw21I GWGCWC 1 cut(s) 754
Alw26I GTCTC 2 cut(s) 595, 910
AlwI GGATC 4 cut(s) 74, 609, 810, 851
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 2 cut(s) 42, 305
ApoI RAATTY 4 cut(s) 260, 554, 792, 1085
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
AseI ATTAAT 2 cut(s) 126, 395
AsiGI ACCGGT 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 534
AspLEI GCGC 1 cut(s) 813
AspS9I GGNCC 2 cut(s) 703, 1103
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 3 cut(s) 82, 990, 1123
AsuII TTCGAA 1 cut(s) 538
AsuNHI GCTAGC 1 cut(s) 869
AvaII GGWCC 2 cut(s) 703, 1103
Bbv12I GWGCWC 1 cut(s) 754
BbvI GCAGC 2 cut(s) 54, 317
BccI CCATC 1 cut(s) 151
BceAI ACGGC 1 cut(s) 637
BcgI CGANNNNNNTGC 2 cut(s) 487, 521
BciT130I CCWGG 4 cut(s) 92, 204, 599, 1108
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 2 cut(s) 595, 910
BfaI CTAG 2 cut(s) 870, 1135
BisI GCNGC 3 cut(s) 43, 46, 306
BlsI GCNGC 3 cut(s) 44, 47, 307
Bme1390I CCNGG 5 cut(s) 92, 204, 599, 707, 1108
Bme18I GGWCC 2 cut(s) 703, 1103
BmgT120I GGNCC 2 cut(s) 703, 1103
BmiI GGNNCC 3 cut(s) 705, 779, 1105
BmrFI CCNGG 5 cut(s) 92, 204, 599, 707, 1108
BmsI GCATC 2 cut(s) 9, 303
BmtI GCTAGC 1 cut(s) 873
Bpu14I TTCGAA 1 cut(s) 538
BpuEI CTTGAG 3 cut(s) 744, 791, 965
BpuMI CCSGG 1 cut(s) 707
BsaAI YACGTR 1 cut(s) 967
BsaJI CCNNGG 2 cut(s) 1106, 1107
BsaWI WCCGGW 1 cut(s) 33
BsaXI ACNNNNNCTCC 2 cut(s) 414, 444
Bsc4I CCNNNNNNNGG 2 cut(s) 521, 846
Bse118I RCCGGY 1 cut(s) 33
Bse1I ACTGG 3 cut(s) 83, 284, 412
Bse3DI GCAATG 1 cut(s) 1073
BseBI CCWGG 4 cut(s) 92, 204, 599, 1108
BseDI CCNNGG 2 cut(s) 1106, 1107
BseGI GGATG 1 cut(s) 143
BseLI CCNNNNNNNGG 2 cut(s) 521, 846
BseMI GCAATG 1 cut(s) 1073
BseMII CTCAG 3 cut(s) 573, 690, 993
BseNI ACTGG 3 cut(s) 83, 284, 412
BseRI GAGGAG 2 cut(s) 332, 1060
BseXI GCAGC 2 cut(s) 54, 317
BshFI GGCC 1 cut(s) 465
BshTI ACCGGT 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 754
BsiSI CCGG 2 cut(s) 34, 707
BslFI GGGAC 3 cut(s) 231, 610, 1089
BslI CCNNNNNNNGG 2 cut(s) 521, 846
BsmAI GTCTC 2 cut(s) 595, 910
BsmFI GGGAC 3 cut(s) 231, 610, 1089
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 538
Bsp1286I GDGCHC 1 cut(s) 754
Bsp1407I TGTACA 1 cut(s) 150
Bsp143I GATC 4 cut(s) 79, 601, 802, 856
BspACI CCGC 2 cut(s) 45, 491
BspANI GGCC 1 cut(s) 465
BspCNI CTCAG 3 cut(s) 572, 691, 994
BspHI TCATGA 1 cut(s) 1089
BspLI GGNNCC 3 cut(s) 705, 779, 1105
BspOI GCTAGC 1 cut(s) 873
BspPI GGATC 4 cut(s) 74, 609, 810, 851
BspT104I TTCGAA 1 cut(s) 538
BsrDI GCAATG 1 cut(s) 1073
BsrFI RCCGGY 1 cut(s) 33
BsrGI TGTACA 1 cut(s) 150
BsrI ACTGG 3 cut(s) 83, 284, 412
BssAI RCCGGY 1 cut(s) 33
BssECI CCNNGG 2 cut(s) 1106, 1107
BssMI GATC 4 cut(s) 79, 601, 802, 856
Bst2UI CCWGG 4 cut(s) 92, 204, 599, 1108
Bst4CI ACNGT 2 cut(s) 749, 1103
Bst6I CTCTTC 2 cut(s) 216, 1013
BstAPI GCANNNNNTGC 1 cut(s) 101
BstAUI TGTACA 1 cut(s) 150
BstBAI YACGTR 1 cut(s) 967
BstBI TTCGAA 1 cut(s) 538
BstC8I GCNNGC 3 cut(s) 491, 694, 871
BstDEI CTNAG 4 cut(s) 49, 559, 699, 1002
BstF5I GGATG 1 cut(s) 143
BstHHI GCGC 1 cut(s) 813
BstKTI GATC 4 cut(s) 82, 604, 805, 859
BstMAI GTCTC 2 cut(s) 595, 910
BstMBI GATC 4 cut(s) 79, 601, 802, 856
BstMWI GCNNNNNNNGC 3 cut(s) 101, 276, 495
BstNI CCWGG 4 cut(s) 92, 204, 599, 1108
BstSCI CCNGG 5 cut(s) 90, 202, 597, 705, 1106
BstV1I GCAGC 2 cut(s) 54, 317
BstX2I RGATCY 2 cut(s) 802, 856
BstYI RGATCY 2 cut(s) 802, 856
BsuRI GGCC 1 cut(s) 465
BtgZI GCGATG 1 cut(s) 540
BtsCI GGATG 1 cut(s) 143
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 3 cut(s) 405, 754, 999
Cac8I GCNNGC 3 cut(s) 491, 694, 871
CciI TCATGA 1 cut(s) 1089
CfoI GCGC 1 cut(s) 813
Cfr10I RCCGGY 1 cut(s) 33
Cfr13I GGNCC 2 cut(s) 703, 1103
Csp6I GTAC 2 cut(s) 86, 151
CspAI ACCGGT 1 cut(s) 33
CviAII CATG 3 cut(s) 96, 814, 1090
CviQI GTAC 2 cut(s) 86, 151
DdeI CTNAG 4 cut(s) 49, 559, 699, 1002
DpnI GATC 4 cut(s) 81, 603, 804, 858
DpnII GATC 4 cut(s) 79, 601, 802, 856
Eam1104I CTCTTC 2 cut(s) 216, 1013
EarI CTCTTC 2 cut(s) 216, 1013
Eco147I AGGCCT 1 cut(s) 465
Eco47I GGWCC 2 cut(s) 703, 1103
Eco57I CTGAAG 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 703
EcoRI GAATTC 2 cut(s) 554, 1085
EcoRII CCWGG 4 cut(s) 90, 202, 597, 1106
FaeI CATG 3 cut(s) 99, 817, 1093
FaqI GGGAC 3 cut(s) 231, 610, 1089
FatI CATG 3 cut(s) 95, 813, 1089
FauI CCCGC 1 cut(s) 498
Fnu4HI GCNGC 3 cut(s) 43, 46, 306
FokI GGATG 1 cut(s) 130
Fsp4HI GCNGC 3 cut(s) 43, 46, 306
FspBI CTAG 2 cut(s) 870, 1135
GlaI GCGC 1 cut(s) 812
GluI GCNGC 3 cut(s) 43, 46, 306
HaeIII GGCC 1 cut(s) 465
HapII CCGG 2 cut(s) 34, 707
HhaI GCGC 1 cut(s) 813
Hin1II CATG 3 cut(s) 99, 817, 1093
Hin6I GCGC 1 cut(s) 811
HinP1I GCGC 1 cut(s) 811
HindIII AAGCTT 1 cut(s) 10
HinfI GANTC 3 cut(s) 53, 61, 836
HpaII CCGG 2 cut(s) 34, 707
HphI GGTGA 3 cut(s) 82, 990, 1123
Hpy166II GTNNAC 3 cut(s) 73, 88, 1131
Hpy188I TCNGA 5 cut(s) 79, 351, 595, 700, 899
Hpy188III TCNNGA 4 cut(s) 627, 761, 982, 1090
Hpy8I GTNNAC 3 cut(s) 73, 88, 1131
HpyAV CCTTC 2 cut(s) 218, 545
HpyCH4III ACNGT 2 cut(s) 749, 1103
HpyCH4IV ACGT 1 cut(s) 966
HpyCH4V TGCA 6 cut(s) 137, 270, 294, 498, 583, 992
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 276, 495
HpyF3I CTNAG 4 cut(s) 49, 559, 699, 1002
HpySE526I ACGT 1 cut(s) 966
Hsp92II CATG 3 cut(s) 99, 817, 1093
HspAI GCGC 1 cut(s) 811
Kzo9I GATC 4 cut(s) 79, 601, 802, 856
LmnI GCTCC 1 cut(s) 1073
Lsp1109I GCAGC 2 cut(s) 54, 317
LweI GCATC 2 cut(s) 9, 303
MaeI CTAG 2 cut(s) 870, 1135
MaeII ACGT 1 cut(s) 966
MaeIII GTNAC 3 cut(s) 324, 335, 996
MalI GATC 4 cut(s) 81, 603, 804, 858
MboI GATC 4 cut(s) 79, 601, 802, 856
MboII GAAGA 2 cut(s) 203, 1030
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 2 cut(s) 802, 856
MhlI GDGCHC 1 cut(s) 754
MlyI GAGTC 1 cut(s) 845
MmeI TCCRAC 2 cut(s) 187, 618
MroXI GAANNNNTTC 1 cut(s) 534
MseI TTAA 4 cut(s) 15, 126, 395, 864
MslI CAYNNNNRTG 1 cut(s) 333
MspA1I CMGCKG 1 cut(s) 45
MspI CCGG 2 cut(s) 34, 707
MspR9I CCNGG 5 cut(s) 92, 204, 599, 707, 1108
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 1 cut(s) 979
MvaI CCWGG 4 cut(s) 92, 204, 599, 1108
MwoI GCNNNNNNNGC 3 cut(s) 101, 276, 495
NciI CCSGG 1 cut(s) 707
NdeII GATC 4 cut(s) 79, 601, 802, 856
NheI GCTAGC 1 cut(s) 869
NlaIII CATG 3 cut(s) 99, 817, 1093
NlaIV GGNNCC 3 cut(s) 705, 779, 1105
NmeAIII GCCGAG 1 cut(s) 656
NmuCI GTSAC 3 cut(s) 324, 335, 996
NspV TTCGAA 1 cut(s) 538
PagI TCATGA 1 cut(s) 1089
PasI CCCWGGG 1 cut(s) 1107
PceI AGGCCT 1 cut(s) 465
PctI GAATGC 1 cut(s) 979
PdmI GAANNNNTTC 1 cut(s) 534
PfeI GAWTC 2 cut(s) 53, 61
PinAI ACCGGT 1 cut(s) 33
PkrI GCNGC 3 cut(s) 44, 47, 307
PleI GAGTC 1 cut(s) 844
PpsI GAGTC 1 cut(s) 844
Ppu21I YACGTR 1 cut(s) 967
PpuMI RGGWCCY 1 cut(s) 703
PshBI ATTAAT 2 cut(s) 126, 395
PsiI TTATAA 1 cut(s) 648
Psp5II RGGWCCY 1 cut(s) 703
Psp6I CCWGG 4 cut(s) 90, 202, 597, 1106
PspGI CCWGG 4 cut(s) 90, 202, 597, 1106
PspN4I GGNNCC 3 cut(s) 705, 779, 1105
PspPI GGNCC 2 cut(s) 703, 1103
PspPPI RGGWCCY 1 cut(s) 703
PsuI RGATCY 2 cut(s) 802, 856
RsaI GTAC 2 cut(s) 87, 152
RsaNI GTAC 2 cut(s) 86, 151
RseI CAYNNNNRTG 1 cut(s) 333
SaqAI TTAA 4 cut(s) 15, 126, 395, 864
SatI GCNGC 3 cut(s) 43, 46, 306
Sau3AI GATC 4 cut(s) 79, 601, 802, 856
Sau96I GGNCC 2 cut(s) 703, 1103
SchI GAGTC 1 cut(s) 845
ScrFI CCNGG 5 cut(s) 92, 204, 599, 707, 1108
SduI GDGCHC 1 cut(s) 754
SfaNI GCATC 2 cut(s) 9, 303
SfuI TTCGAA 1 cut(s) 538
SinI GGWCC 2 cut(s) 703, 1103
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 3 cut(s) 759, 806, 980
SmoI CTYRAG 3 cut(s) 759, 806, 980
SseBI AGGCCT 1 cut(s) 465
SsiI CCGC 2 cut(s) 45, 491
SspMI CTAG 2 cut(s) 870, 1135
StuI AGGCCT 1 cut(s) 465
StyD4I CCNGG 5 cut(s) 90, 202, 597, 705, 1106
TaaI ACNGT 2 cut(s) 749, 1103
TaiI ACGT 1 cut(s) 969
TaqI TCGA 2 cut(s) 538, 834
TatI WGTACW 2 cut(s) 85, 150
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 2 cut(s) 53, 61
Tru1I TTAA 4 cut(s) 15, 126, 395, 864
Tru9I TTAA 4 cut(s) 15, 126, 395, 864
TscAI CASTG 3 cut(s) 412, 754, 999
TseFI GTSAC 3 cut(s) 324, 335, 996
TseI GCWGC 2 cut(s) 42, 305
Tsp45I GTSAC 3 cut(s) 324, 335, 996
TspDTI ATGAA 8 cut(s) 171, 225, 315, 543, 1046, 1059, 1078, 1106
TspRI CASTG 3 cut(s) 412, 754, 999
VpaK11BI GGWCC 2 cut(s) 703, 1103
VspI ATTAAT 2 cut(s) 126, 395
XapI RAATTY 4 cut(s) 260, 554, 792, 1085
XmnI GAANNNNTTC 1 cut(s) 534
XspI CTAG 2 cut(s) 870, 1135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.