Rroxscaffold_3G00239990

Senescence-associated carboxylesterase 101-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000388
Physical Location & Seq
Forward (+)
31361344 .. 31363975
2632 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00239990.1

Sequence Viewer

Length: 1749 bp
ATGACCATCCAAAACCAGTTTAGCAGCGGCTTAGAATCGGGGAATTTTGTGGTGAACTCTGATCCGGTACACCAGGCATGGTGTGCGATTGAGCAACAAAGACAGGTTAATCCAAATGCAGAGCCATCCTTGTACAATGAAATAATCCAACCAGAAAATCCAATCGTCATAGCTTTTGGCACTCCACCTGGCTCTCTTCAGGGACAAGAAGGCTTGGTTTCGTCAAAAGATTTTGCTCACTTTGAATTTTTGTGCAACAAAAGCAATCCAGATTTCTCCATCAATGAAGCAGCTATCAAACTATTTCAGTTGCATTATAATGACCTCCTCCTCCTGAAAAATAAGCTGGTAGAGAACAGCAAGAGCAAAACCCCACCATTAATAATCATCACTGGACAATTTTTGGGAGGTAGTGTGGCTACACTCTTCACCTTATGGTTGCTAGAAGGCCTCAACTTGTCGAAAACCAAACGCCCGCTTTGCATTACTTTCGGTTCTCCACTTGTTGGCGATGAACACCTTCGAAAATGTGTGCTGGAATTCTCAACTTGGAAGTCTTGCTTCTTGCATATAGTCTCCGACCAAGATCATACACCGAAAATCTTTATGTCCCAAAATAGTGAAAATACAACTGGTGCTTATAAGCCTTTTGGAACATTCTTGTTGTGCTCGGCTTCGGGTTGTGCTTGCTCTGAGGACCCGGATTTCATTTCGGAACAATTTGTGACAACCAATTCTCCCAGTGCTCAAACTCAAGATTCTAATTTGGGGTTTTCTTATGGACAAATTTTGGAGGATCTCAAGCGGAAGGCATTATGTAATATTTTCAAGTCCATTGAAGGGCAAAGCCATCCGCTTCAAGCTAGCATAATCACACAACTCCTAGCAATTGGAGTAGTCTCACAGCAACAGTCCCAGGGTACTGACAATCTGGTCAGGAAGATGAAAAAACATGAAACAAAGTTATTAATTCAGAAGAAGAAGAACTCAGATTCTGACAAGAAATTGAATGAAATGAAAATTCACATGGCCTTCTTGGAGTGGTACAAGAAGGACGCCAAACGTCAAAATATTGGATACTATGACTTGTACAGAAATATGGGCAATCAATCTGACAATAACGTTAACGGGTATAAGAAGAAGCTCATGAATTACTGGGAGGACTCTGTCACAGAAGTAGAGAACAAGCCCCAGTTAGAAGGAGCTCACTTTCGGGTTCGTTGGCTTTATGCAGGCACAAACTACAGAGGAATGGTTGAACCACTTAACATTGCAGACTACTATAGGGATGGGGGTAAAAATTACCAAACTGATGCTGGGAAAAGGCCTAAACATTTTACTCTGTTGGAGGAATGGCATCAGGAGAAGCAGGAGCAAGAAAAGAAGAAGAAGCAGGAAACACAGAAAAAAGAAGAAAAACCAGAATCTGGCCCAAGCAAATCCAAAAGAGAGAACGTGGGTTCTAGTTTGAATGATGATTCTTGTTTCTGGGCGCGTGTTGAGGAAGCTCTCATCTTGTTGGAGAATGGAGGACTAACTACTGATGACAAAACGAAGTTGAAAGAGTTTGAGGACTACGTGTGGAATGCTCTCAAGAATTATGCAGTGTCACCTGAGATTTTCTTGAAGAAGAGCACTTTTATGAAATGGTGGAATGAGTATAAGGGAATTGTTGAAAGCTCCTCATTGCTCTTGGACTTCATGAAAAATGGCGGTCCCAGAGAGTACGAGGCAGGGAAGTTCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_3

Protein Analysis

582

Amino Acids

66.28

Weight (kDa)

6.88

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 87 - 203 2.2e-12 Lipase (class 3)
EDS1_EP PF18117 346 - 561 7.5e-60 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000388)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14930 AT5G14930 AT5G14930
fragaria_vesca FvH4_2g18461 FvH4_6g50160 FvH4_6g50160 FvH4_6g50160 FvH4_6g50162
malus_domestica MD01G1017800.v1.1 MD09G1038500.v1.1 MD09G1038700.v1.1 MD09G1039000.v1.1 MD09G1039700.v1.1 MD09G1039800.v1.1 MD17G1039600.v1.1 MD17G1039700.v1.1 MD17G1039800.v1.1 MD17G1039900.v1.1 MD17G1040000.v1.1
prunus_persica Prupe.2G019500_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279300_v2.0.a1
pyrus_communis pycom111g03070 pycom17g03570 pycom17g03580
rosa_chinensis RchiOBHm_Chr2g0170411 RchiOBHm_Chr2g0170431 RchiOBHm_Chr2g0170561 RchiOBHm_Chr6g0283951 RchiOBHm_Chr6g0283961 RchiOBHm_Chr6g0283981 RchiOBHm_Chr7g0219521 RchiOBHm_Chr7g0219541
rosa_laevigata RLG00000002285 RLG00000012782 RLG00000012784 RLG00000021954 RLG00000021955 RLG00000021956
rosa_multiflora Rmu_co8245087.1_g000001 Rmu_co8259259.1_g000001 Rmu_sc0003047.1_g000001 Rmu_sc0008697.1_g000004 Rmu_sc0009395.1_g000014 Rmu_sc0009395.1_g000016 Rmu_sc0009395.1_g000019 Rmu_sc0009395.1_g000026 Rmu_sc0009395.1_g000028 Rmu_sc0009395.1_g000040 Rmu_sc0021809.1_g000001 Rmu_ssc0000442.1_g000026 Rmu_ssc0000442.1_g000030
rosa_roxburghii Rroxscaffold_2G00081280 Rroxscaffold_2G00081290 Rroxscaffold_2G00081330 Rroxscaffold_3G00239990 Rroxscaffold_4G00294050 Rroxscaffold_4G00294070 Rroxscaffold_7G00185030
rosa_rugosa Rorug02G0548700 Rorug02G0548900 Rorug06G0158800 Rorug06G0158900 Rorug07G0186000
rosa_samantha Rh2AG620300 Rh2AG620500 Rh2AG620600 Rh2AG620700 Rh2BG631200 Rh2BG631400 Rh2BG631600 Rh2BG631700 Rh2CG601100 Rh2CG601200 Rh2CG601300 Rh2DG643900 Rh2DG644200 Rh2DG644400 Rh6AG272000 Rh6AG272300 Rh6BG272900 Rh6BG273000 Rh6CG274100 Rh6CG274200 Rh6DG267100 Rh6DG267200 Rh6DG267300 Rh7AG329500 Rh7AG329900 Rh7BG319400 Rh7BG319600 Rh7CG346800 Rh7CG347200 Rh7DG325400
rosa_wichuraiana Rw2G051410 Rw2G051430 Rw2G051440 Rw2G051450 Rw6G023440 Rw7G027780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 318, 642
AasI GACNNNNNNGTC 1 cut(s) 932
AccB7I CCANNNNNTGG 2 cut(s) 506, 1427
AccII CGCG 1 cut(s) 1495
AciI CCGC 5 cut(s) 27, 476, 805, 854, 1713
AclI AACGTT 1 cut(s) 1122
AclWI GGATC 2 cut(s) 56, 804
AcsI RAATTY 5 cut(s) 43, 245, 539, 786, 1020
AcuI CTGAAG 1 cut(s) 182
AcyI GRCGYC 1 cut(s) 1056
AfaI GTAC 6 cut(s) 69, 134, 922, 1046, 1091, 1727
AfiI CCNNNNNNNGG 3 cut(s) 506, 840, 1427
AflIII ACRYGT 1 cut(s) 1578
AjnI CCWGG 3 cut(s) 72, 187, 915
AluBI AGCT 8 cut(s) 173, 293, 346, 863, 1144, 1205, 1508, 1680
AluI AGCT 8 cut(s) 173, 293, 346, 863, 1144, 1205, 1508, 1680
Alw21I GWGCWC 4 cut(s) 671, 748, 1207, 1637
Alw26I GTCTC 2 cut(s) 580, 904
AlwI GGATC 2 cut(s) 56, 804
AlwNI CAGNNNCTG 2 cut(s) 995, 1427
AoxI GGCC 4 cut(s) 448, 1029, 1325, 1429
ApeKI GCWGC 2 cut(s) 24, 290
ApoI RAATTY 5 cut(s) 43, 245, 539, 786, 1020
AseI ATTAAT 2 cut(s) 380, 968
Asp700I GAANNNNTTC 1 cut(s) 519
AspLEI GCGC 1 cut(s) 1495
AspS9I GGNCC 3 cut(s) 697, 1430, 1715
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 3 cut(s) 64, 421, 1602
AsuII TTCGAA 1 cut(s) 523
AsuNHI GCTAGC 1 cut(s) 863
AvaII GGWCC 2 cut(s) 697, 1715
BanII GRGCYC 1 cut(s) 1207
Bbv12I GWGCWC 4 cut(s) 671, 748, 1207, 1637
BbvI GCAGC 2 cut(s) 36, 302
BccI CCATC 5 cut(s) 14, 133, 287, 858, 1283
BcgI CGANNNNNNTGC 2 cut(s) 472, 506
BciT130I CCWGG 3 cut(s) 74, 189, 917
BciVI GTATCC 1 cut(s) 1070
BcnI CCSGG 1 cut(s) 701
BcoDI GTCTC 2 cut(s) 580, 904
BfaI CTAG 4 cut(s) 443, 864, 884, 1464
BfmI CTRYAG 2 cut(s) 1243, 1282
BfuI GTATCC 1 cut(s) 1070
BisI GCNGC 3 cut(s) 25, 28, 291
BlsI GCNGC 3 cut(s) 26, 29, 292
Bme1390I CCNGG 4 cut(s) 74, 189, 701, 917
Bme18I GGWCC 2 cut(s) 697, 1715
BmgT120I GGNCC 3 cut(s) 697, 1430, 1715
BmiI GGNNCC 2 cut(s) 699, 1717
BmrFI CCNGG 4 cut(s) 74, 189, 701, 917
BmrI ACTGGG 3 cut(s) 735, 1165, 1186
BmsI GCATC 2 cut(s) 1303, 1366
BmtI GCTAGC 1 cut(s) 867
BmuI ACTGGG 3 cut(s) 735, 1165, 1186
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 3 cut(s) 738, 785, 1577
BpuMI CCSGG 1 cut(s) 701
BsaAI YACGTR 1 cut(s) 1579
BsaHI GRCGYC 1 cut(s) 1056
BsaJI CCNNGG 2 cut(s) 915, 916
BsaWI WCCGGW 1 cut(s) 64
BsaXI ACNNNNNCTCC 4 cut(s) 399, 429, 721, 751
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 840, 1427
Bse1I ACTGG 6 cut(s) 16, 397, 637, 741, 1160, 1192
Bse3DI GCAATG 2 cut(s) 1269, 1685
BseBI CCWGG 3 cut(s) 74, 189, 917
BseDI CCNNGG 2 cut(s) 915, 916
BseGI GGATG 4 cut(s) 6, 125, 850, 1294
BseLI CCNNNNNNNGG 3 cut(s) 506, 840, 1427
BseMI GCAATG 2 cut(s) 1269, 1685
BseMII CTCAG 3 cut(s) 684, 1002, 1605
BseNI ACTGG 6 cut(s) 16, 397, 637, 741, 1160, 1192
BseRI GAGGAG 3 cut(s) 317, 320, 1672
BseXI GCAGC 2 cut(s) 36, 302
BseYI CCCAGC 1 cut(s) 1316
Bsh1236I CGCG 1 cut(s) 1495
BshFI GGCC 4 cut(s) 450, 1031, 1327, 1431
BsiHKAI GWGCWC 4 cut(s) 671, 748, 1207, 1637
BsiSI CCGG 2 cut(s) 65, 701
BslFI GGGAC 4 cut(s) 216, 595, 898, 1701
BslI CCNNNNNNNGG 3 cut(s) 506, 840, 1427
BsmAI GTCTC 2 cut(s) 580, 904
BsmFI GGGAC 4 cut(s) 216, 595, 898, 1701
BsmI GAATGC 1 cut(s) 1591
BsnI GGCC 4 cut(s) 450, 1031, 1327, 1431
Bsp119I TTCGAA 1 cut(s) 523
Bsp1286I GDGCHC 4 cut(s) 671, 748, 1207, 1637
Bsp1407I TGTACA 2 cut(s) 132, 1089
Bsp143I GATC 3 cut(s) 61, 586, 796
BspACI CCGC 5 cut(s) 27, 476, 805, 854, 1713
BspANI GGCC 4 cut(s) 450, 1031, 1327, 1431
BspCNI CTCAG 3 cut(s) 685, 1001, 1606
BspFNI CGCG 1 cut(s) 1495
BspHI TCATGA 2 cut(s) 1146, 1701
BspLI GGNNCC 2 cut(s) 699, 1717
BspOI GCTAGC 1 cut(s) 867
BspPI GGATC 2 cut(s) 56, 804
BspQI GCTCTTC 1 cut(s) 1625
BspT104I TTCGAA 1 cut(s) 523
BsrDI GCAATG 2 cut(s) 1269, 1685
BsrGI TGTACA 2 cut(s) 132, 1089
BsrI ACTGG 6 cut(s) 16, 397, 637, 741, 1160, 1192
BssECI CCNNGG 2 cut(s) 915, 916
BssMI GATC 3 cut(s) 61, 586, 796
BssNI GRCGYC 1 cut(s) 1056
Bst2UI CCWGG 3 cut(s) 74, 189, 917
Bst4CI ACNGT 1 cut(s) 912
Bst6I CTCTTC 3 cut(s) 201, 431, 1625
BstACI GRCGYC 1 cut(s) 1056
BstAPI GCANNNNNTGC 1 cut(s) 83
BstAUI TGTACA 2 cut(s) 132, 1089
BstBAI YACGTR 1 cut(s) 1579
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 4 cut(s) 476, 688, 865, 1234
BstDEI CTNAG 5 cut(s) 31, 693, 988, 1614, 1746
BstF5I GGATG 4 cut(s) 6, 125, 850, 1294
BstFNI CGCG 1 cut(s) 1495
BstHHI GCGC 1 cut(s) 1495
BstKTI GATC 3 cut(s) 64, 589, 799
BstMAI GTCTC 2 cut(s) 580, 904
BstMBI GATC 3 cut(s) 61, 586, 796
BstMWI GCNNNNNNNGC 3 cut(s) 83, 261, 480
BstNI CCWGG 3 cut(s) 74, 189, 917
BstSCI CCNGG 4 cut(s) 72, 187, 699, 915
BstSFI CTRYAG 2 cut(s) 1243, 1282
BstUI CGCG 1 cut(s) 1495
BstV1I GCAGC 2 cut(s) 36, 302
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
BsuI GTATCC 1 cut(s) 1070
BsuRI GGCC 4 cut(s) 450, 1031, 1327, 1431
BtgZI GCGATG 1 cut(s) 525
BtsCI GGATG 4 cut(s) 6, 125, 850, 1294
BtsI GCAGTG 1 cut(s) 1611
BtsIMutI CAGTG 3 cut(s) 390, 748, 1611
Cac8I GCNNGC 4 cut(s) 476, 688, 865, 1234
CaiI CAGNNNCTG 2 cut(s) 995, 1427
CciI TCATGA 2 cut(s) 1146, 1701
CfoI GCGC 1 cut(s) 1495
Cfr13I GGNCC 3 cut(s) 697, 1430, 1715
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 6 cut(s) 68, 133, 921, 1045, 1090, 1726
CviAII CATG 5 cut(s) 78, 953, 1027, 1147, 1702
CviQI GTAC 6 cut(s) 68, 133, 921, 1045, 1090, 1726
DdeI CTNAG 5 cut(s) 31, 693, 988, 1614, 1746
DpnI GATC 3 cut(s) 63, 588, 798
DpnII GATC 3 cut(s) 61, 586, 796
DrdI GACNNNNNNGTC 1 cut(s) 932
DseDI GACNNNNNNGTC 1 cut(s) 932
Eam1104I CTCTTC 3 cut(s) 201, 431, 1625
EarI CTCTTC 3 cut(s) 201, 431, 1625
Ecl136II GAGCTC 1 cut(s) 1205
Eco147I AGGCCT 2 cut(s) 450, 1327
Eco24I GRGCYC 1 cut(s) 1207
Eco47I GGWCC 2 cut(s) 697, 1715
Eco53kI GAGCTC 1 cut(s) 1205
Eco57I CTGAAG 1 cut(s) 182
EcoICRI GAGCTC 1 cut(s) 1205
EcoO109I RGGNCCY 1 cut(s) 697
EcoRI GAATTC 1 cut(s) 539
EcoRII CCWGG 3 cut(s) 72, 187, 915
EcoT38I GRGCYC 1 cut(s) 1207
FaeI CATG 5 cut(s) 81, 956, 1030, 1150, 1705
FalI AAGNNNNNCTT 2 cut(s) 545, 577
FaqI GGGAC 4 cut(s) 216, 595, 898, 1701
FatI CATG 5 cut(s) 77, 952, 1026, 1146, 1701
FauI CCCGC 1 cut(s) 483
Fnu4HI GCNGC 3 cut(s) 25, 28, 291
FokI GGATG 3 cut(s) 112, 837, 1301
FriOI GRGCYC 1 cut(s) 1207
Fsp4HI GCNGC 3 cut(s) 25, 28, 291
FspBI CTAG 4 cut(s) 443, 864, 884, 1464
GlaI GCGC 1 cut(s) 1494
GluI GCNGC 3 cut(s) 25, 28, 291
GsaI CCCAGC 1 cut(s) 1320
HaeIII GGCC 4 cut(s) 450, 1031, 1327, 1431
HapII CCGG 2 cut(s) 65, 701
HgaI GACGC 1 cut(s) 1064
HhaI GCGC 1 cut(s) 1495
Hin1I GRCGYC 1 cut(s) 1056
Hin1II CATG 5 cut(s) 81, 956, 1030, 1150, 1705
Hin6I GCGC 1 cut(s) 1493
HinP1I GCGC 1 cut(s) 1493
HincII GTYRAC 1 cut(s) 1126
HindII GTYRAC 1 cut(s) 1126
HinfI GANTC 6 cut(s) 35, 758, 992, 1163, 1424, 1478
HpaI GTTAAC 1 cut(s) 1126
HpaII CCGG 2 cut(s) 65, 701
HphI GGTGA 3 cut(s) 64, 421, 1602
Hpy166II GTNNAC 4 cut(s) 55, 70, 1126, 1743
Hpy188I TCNGA 8 cut(s) 61, 580, 694, 715, 975, 991, 997, 1114
Hpy188III TCNNGA 9 cut(s) 269, 334, 755, 937, 1147, 1361, 1594, 1624, 1702
Hpy8I GTNNAC 4 cut(s) 55, 70, 1126, 1743
HpyAV CCTTC 8 cut(s) 203, 440, 530, 802, 833, 1042, 1045, 1193
HpyCH4III ACNGT 1 cut(s) 912
HpyCH4IV ACGT 4 cut(s) 1063, 1122, 1455, 1578
HpyCH4V TGCA 8 cut(s) 119, 255, 313, 483, 568, 1232, 1274, 1604
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 261, 480
HpyF3I CTNAG 5 cut(s) 31, 693, 988, 1614, 1746
HpySE526I ACGT 4 cut(s) 1063, 1122, 1455, 1578
Hsp92I GRCGYC 1 cut(s) 1056
Hsp92II CATG 5 cut(s) 81, 956, 1030, 1150, 1705
HspAI GCGC 1 cut(s) 1493
KspAI GTTAAC 1 cut(s) 1126
Kzo9I GATC 3 cut(s) 61, 586, 796
LguI GCTCTTC 1 cut(s) 1625
LmnI GCTCC 3 cut(s) 1202, 1372, 1685
Lsp1109I GCAGC 2 cut(s) 36, 302
LweI GCATC 2 cut(s) 1303, 1366
MaeI CTAG 4 cut(s) 443, 864, 884, 1464
MaeII ACGT 4 cut(s) 1063, 1122, 1455, 1578
MaeIII GTNAC 3 cut(s) 724, 1168, 1608
MalI GATC 3 cut(s) 63, 588, 798
MboI GATC 3 cut(s) 61, 586, 796
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 4 cut(s) 671, 748, 1207, 1637
MlyI GAGTC 1 cut(s) 1157
MmeI TCCRAC 4 cut(s) 172, 603, 1326, 1500
MroXI GAANNNNTTC 1 cut(s) 519
MseI TTAA 5 cut(s) 108, 380, 968, 1125, 1266
MslI CAYNNNNRTG 2 cut(s) 318, 1640
MspA1I CMGCKG 1 cut(s) 27
MspI CCGG 2 cut(s) 65, 701
MspR9I CCNGG 4 cut(s) 74, 189, 701, 917
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 1591
MvaI CCWGG 3 cut(s) 74, 189, 917
MvnI CGCG 1 cut(s) 1495
MwoI GCNNNNNNNGC 3 cut(s) 83, 261, 480
NciI CCSGG 1 cut(s) 701
NdeII GATC 3 cut(s) 61, 586, 796
NheI GCTAGC 1 cut(s) 863
NlaIII CATG 5 cut(s) 81, 956, 1030, 1150, 1705
NlaIV GGNNCC 2 cut(s) 699, 1717
NmeAIII GCCGAG 1 cut(s) 650
NmuCI GTSAC 3 cut(s) 724, 1168, 1608
NspV TTCGAA 1 cut(s) 523
PagI TCATGA 2 cut(s) 1146, 1701
PasI CCCWGGG 1 cut(s) 916
PceI AGGCCT 2 cut(s) 450, 1327
PciSI GCTCTTC 1 cut(s) 1625
PctI GAATGC 1 cut(s) 1591
PdmI GAANNNNTTC 1 cut(s) 519
PfeI GAWTC 5 cut(s) 35, 758, 992, 1424, 1478
PflFI GACNNNGTC 1 cut(s) 1166
PflMI CCANNNNNTGG 2 cut(s) 506, 1427
PkrI GCNGC 3 cut(s) 26, 29, 292
PleI GAGTC 1 cut(s) 1157
PpsI GAGTC 1 cut(s) 1157
Ppu21I YACGTR 1 cut(s) 1579
PpuMI RGGWCCY 1 cut(s) 697
PshBI ATTAAT 2 cut(s) 380, 968
PsiI TTATAA 2 cut(s) 318, 642
Psp124BI GAGCTC 1 cut(s) 1207
Psp1406I AACGTT 1 cut(s) 1122
Psp5II RGGWCCY 1 cut(s) 697
Psp6I CCWGG 3 cut(s) 72, 187, 915
PspFI CCCAGC 1 cut(s) 1316
PspGI CCWGG 3 cut(s) 72, 187, 915
PspN4I GGNNCC 2 cut(s) 699, 1717
PspPI GGNCC 3 cut(s) 697, 1430, 1715
PspPPI RGGWCCY 1 cut(s) 697
PstNI CAGNNNCTG 2 cut(s) 995, 1427
PsuI RGATCY 1 cut(s) 796
PsyI GACNNNGTC 1 cut(s) 1166
RsaI GTAC 6 cut(s) 69, 134, 922, 1046, 1091, 1727
RsaNI GTAC 6 cut(s) 68, 133, 921, 1045, 1090, 1726
RseI CAYNNNNRTG 2 cut(s) 318, 1640
SacI GAGCTC 1 cut(s) 1207
SapI GCTCTTC 1 cut(s) 1625
SaqAI TTAA 5 cut(s) 108, 380, 968, 1125, 1266
SatI GCNGC 3 cut(s) 25, 28, 291
Sau3AI GATC 3 cut(s) 61, 586, 796
Sau96I GGNCC 3 cut(s) 697, 1430, 1715
SchI GAGTC 1 cut(s) 1157
ScrFI CCNGG 4 cut(s) 74, 189, 701, 917
SduI GDGCHC 4 cut(s) 671, 748, 1207, 1637
SfaNI GCATC 2 cut(s) 1303, 1366
SfcI CTRYAG 2 cut(s) 1243, 1282
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 2 cut(s) 697, 1715
SmiMI CAYNNNNRTG 2 cut(s) 318, 1640
SmlI CTYRAG 3 cut(s) 753, 800, 1592
SmoI CTYRAG 3 cut(s) 753, 800, 1592
SseBI AGGCCT 2 cut(s) 450, 1327
SsiI CCGC 5 cut(s) 27, 476, 805, 854, 1713
SspI AATATT 2 cut(s) 823, 1072
SspMI CTAG 4 cut(s) 443, 864, 884, 1464
SstI GAGCTC 1 cut(s) 1207
StuI AGGCCT 2 cut(s) 450, 1327
StyD4I CCNGG 4 cut(s) 72, 187, 699, 915
TaaI ACNGT 1 cut(s) 912
TaiI ACGT 4 cut(s) 1066, 1125, 1458, 1581
TaqI TCGA 2 cut(s) 461, 523
TatI WGTACW 2 cut(s) 132, 1089
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 5 cut(s) 35, 758, 992, 1424, 1478
Tru1I TTAA 5 cut(s) 108, 380, 968, 1125, 1266
Tru9I TTAA 5 cut(s) 108, 380, 968, 1125, 1266
TscAI CASTG 3 cut(s) 397, 748, 1611
TseFI GTSAC 3 cut(s) 724, 1168, 1608
TseI GCWGC 2 cut(s) 24, 290
Tsp45I GTSAC 3 cut(s) 724, 1168, 1608
TspRI CASTG 3 cut(s) 397, 748, 1611
Tth111I GACNNNGTC 1 cut(s) 1166
Van91I CCANNNNNTGG 2 cut(s) 506, 1427
VpaK11BI GGWCC 2 cut(s) 697, 1715
VspI ATTAAT 2 cut(s) 380, 968
XapI RAATTY 5 cut(s) 43, 245, 539, 786, 1020
XcmI CCANNNNNNNNNTGG 1 cut(s) 1313
XmnI GAANNNNTTC 1 cut(s) 519
XspI CTAG 4 cut(s) 443, 864, 884, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.