AT5G45110

npr1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000570
Physical Location & Seq
Forward (+)
18228768 .. 18231588
2821 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G45110.2

Sequence Viewer

Length: 1761 bp
ATGGCTACTTTGACTGAGCCATCATCATCTTTGAGTTTCACATCTTCTCATTTCTCTTATGGTTCTATTGGGTCCAATCACTTCTCATCAAGCTCAGCTTCTAATCCTGAAGTTGTTAGTCTAACCAAACTCAGCTCCAATCTTGAGCAGCTTCTTAGTAATTCAGATTGTGATTACAGTGATGCAGAGATCATTGTTGATGGTGTTCCAGTTGGTGTTCATAGATGCATTTTAGCTGCAAGAAGTAAGTTTTTCCAAGATTTGTTTAAGAAAGAAAAGAAAATTTCGAAAACTGAGAAACCAAAGTATCAGTTGAGAGAGATGTTACCTTATGGAGCTGTTGCTCATGAAGCTTTCTTGTATTTCTTGAGTTATATATATACTGGGAGATTAAAGCCTTTTCCATTGGAGGTTTCGACTTGTGTTGATCCAGTTTGTTCTCATGATTGTTGTCGACCTGCCATTGATTTTGTTGTTCAATTGATGTATGCTTCCTCTGTTCTCCAAGTGCCTGAGCTAGTTTCATCTTTTCAGCGGCGGCTTTGTAACTTTGTGGAGAAGACCCTTGTTGAGAATGTTCTTCCCATTCTTATGGTTGCTTTCAATTGTAAGTTGACTCAGCTTCTTGATCAGTGTATTGAGAGAGTGGCGAGGTCAGATCTTTACAGGTTCTGTATTGAAAAGGAAGTTCCTCCCGAAGTAGCAGAGAAGATTAAACAGCTTCGACTTATATCCCCGCAAGACGAAGAAACCAGTCCCAAGATTTCGGAGAAATTGCTTGAAAGAATCGGTAAAATTCTCAAGGCCTTGGATTCAGATGATGTTGAGCTTGTGAAGCTTCTTTTGACTGAGTCAGATATCACTCTAGATCAAGCCAATGGTCTGCATTATTCTGTTGTGTATAGTGATCCGAAAGTTGTTGCCGAGATTCTTGCTCTGGATATGGGTGATGTGAACTACAGGAATTCCCGGGGTTACACGGTTCTTCATTTTGCTGCGATGCGTAGAGAGCCATCGATCATTATATCGCTTATCGATAAAGGCGCCAATGCATCTGAGTTTACATCTGACGGACGTAGCGCAGTTAATATATTAAGAAGACTGACAAATCCAAAGGATTATCATACCAAAACAGCTAAAGGGCGTGAATCTAGTAAAGCCAGGTTATGCATCGATATCTTGGAAAGAGAAATCAGGAAGAACCCCATGGTTCTAGATACACCAATGTGTTCCATTTCTATGCCTGAAGATCTCCAGATGAGACTGTTGTACCTAGAAAAGAGAGTGGGGCTTGCTCAGTTGTTCTTTCCAACGGAAGCTAAAGTTGCTATGGACATTGGTAACGTAGAAGGTACAAGTGAGTTCACGGGTTTGTCACCTCCTTCGAGTGGGTTAACCGGAAACTTGAGTCAGGTTGATTTAAACGAAACTCCTCATATGCAAACCCAAAGACTTCTTACTCGTATGGTGGCTCTAATGAAAACAGTTGAGACTGGTCGAAGGTTTTTTCCATATGGTTCAGAGGTTCTAGATAAGTACATGGCTGAGTATATAGACGACGACATCCTCGACGATTTCCATTTTGAGAAGGGATCTACACATGAAAGAAGATTGAAAAGAATGAGATATAGAGAGCTTAAGGATGATGTCCAAAAGGCATATAGCAAAGACAAAGAGTCTAAGATTGCGCGGTCTTGTCTTTCTGCTTCATCTTCTCCTTCTTCTTCTTCCATAAGAGATGACCTGCACAACACAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0042802 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

586

Amino Acids

66.06

Weight (kDa)

6.13

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 55 - 134 2.2e-11 BTB/POZ domain
DUF3420 PF11900 220 - 267 7.6e-19 Domain of unknown function (DUF3420)
Ank_2 PF12796 270 - 351 1.6e-06 Ankyrin repeats (3 copies)
NPR1_like_C PF12313 366 - 495 6e-51 NPR1/NIM1 like defence protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000570)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45110 AT5G45110
fragaria_vesca FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa Rorug02G0432800 Rorug05G0051600
rosa_samantha Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 466, 1752
AccB1I GGYRCC 1 cut(s) 1043
AccI GTMKAC 1 cut(s) 454
AccII CGCG 1 cut(s) 1690
AciI CCGC 4 cut(s) 535, 538, 737, 1690
AclWI GGATC 3 cut(s) 422, 902, 1600
AcsI RAATTY 3 cut(s) 282, 795, 964
AcuI CTGAAG 2 cut(s) 129, 1266
AcyI GRCGYC 1 cut(s) 1044
AfaI GTAC 3 cut(s) 1271, 1354, 1538
AfiI CCNNNNNNNGG 1 cut(s) 1388
AflII CTTAAG 1 cut(s) 1637
AgsI TTSAA 5 cut(s) 479, 604, 680, 782, 1615
AhdI GACNNNNNGTC 1 cut(s) 1675
AjnI CCWGG 1 cut(s) 1160
AleI CACNNNNGTG 1 cut(s) 1225
Alw26I GTCTC 2 cut(s) 1255, 1484
AlwI GGATC 3 cut(s) 422, 902, 1600
AlwNI CAGNNNCTG 1 cut(s) 672
Ama87I CYCGRG 1 cut(s) 969
AoxI GGCC 1 cut(s) 804
ApeKI GCWGC 3 cut(s) 148, 236, 995
ApoI RAATTY 3 cut(s) 282, 795, 964
AspLEI GCGC 3 cut(s) 1046, 1082, 1690
AspS9I GGNCC 1 cut(s) 72
AsuC2I CCSGG 2 cut(s) 970, 971
AsuHPI GGTGA 2 cut(s) 959, 1368
AsuII TTCGAA 1 cut(s) 287
AvaI CYCGRG 1 cut(s) 969
AvaII GGWCC 1 cut(s) 72
BaeI ACNNNNGTAYC 4 cut(s) 290, 323, 1253, 1286
BanI GGYRCC 1 cut(s) 1043
BbsI GAAGAC 2 cut(s) 566, 1105
BbvI GCAGC 3 cut(s) 160, 223, 982
BccI CCATC 3 cut(s) 28, 194, 1021
BcgI CGANNNNNNTGC 2 cut(s) 914, 948
BciT130I CCWGG 1 cut(s) 1162
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 2 cut(s) 970, 971
BcoDI GTCTC 2 cut(s) 1255, 1484
BfaI CTAG 6 cut(s) 518, 866, 1152, 1214, 1274, 1529
BfmI CTRYAG 1 cut(s) 958
BfoI RGCGCY 1 cut(s) 1047
BfrI CTTAAG 1 cut(s) 1637
BfuAI ACCTGC 2 cut(s) 466, 1752
BglII AGATCT 2 cut(s) 658, 1249
BisI GCNGC 5 cut(s) 149, 237, 536, 539, 996
BlpI GCTNAGC 1 cut(s) 94
BlsI GCNGC 5 cut(s) 150, 238, 537, 540, 997
Bme1390I CCNGG 3 cut(s) 970, 971, 1162
Bme18I GGWCC 1 cut(s) 72
BmeRI GACNNNNNGTC 1 cut(s) 1675
BmeT110I CYCGRG 1 cut(s) 969
BmgT120I GGNCC 1 cut(s) 72
BmiI GGNNCC 2 cut(s) 73, 1045
BmrFI CCNGG 3 cut(s) 970, 971, 1162
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 5 cut(s) 172, 215, 990, 1061, 1179
BmuI ACTGGG 1 cut(s) 393
BpiI GAAGAC 2 cut(s) 566, 1105
BpmI CTGGAG 1 cut(s) 1238
Bpu10I CCTNAGC 1 cut(s) 513
Bpu1102I GCTNAGC 1 cut(s) 94
Bpu14I TTCGAA 1 cut(s) 287
BpuEI CTTGAG 4 cut(s) 164, 388, 785, 1426
BpuMI CCSGG 2 cut(s) 970, 971
Bsa29I ATCGAT 3 cut(s) 1016, 1035, 1173
BsaHI GRCGYC 1 cut(s) 1044
BsaJI CCNNGG 4 cut(s) 807, 969, 970, 1206
BsaWI WCCGGW 1 cut(s) 1397
Bsc4I CCNNNNNNNGG 1 cut(s) 1388
Bse1I ACTGG 5 cut(s) 209, 388, 431, 753, 1498
BseBI CCWGG 1 cut(s) 1162
BseCI ATCGAT 3 cut(s) 1016, 1035, 1173
BseDI CCNNGG 4 cut(s) 807, 969, 970, 1206
BseGI GGATG 2 cut(s) 1563, 1648
BseLI CCNNNNNNNGG 1 cut(s) 1388
BseNI ACTGG 5 cut(s) 209, 388, 431, 753, 1498
BseRI GAGGAG 1 cut(s) 1422
BseXI GCAGC 3 cut(s) 160, 223, 982
BsgI GTGCAG 1 cut(s) 1730
Bsh1236I CGCG 1 cut(s) 1690
BshFI GGCC 1 cut(s) 806
BshNI GGYRCC 1 cut(s) 1043
BshVI ATCGAT 3 cut(s) 1016, 1035, 1173
BsiHKCI CYCGRG 1 cut(s) 969
BsiSI CCGG 2 cut(s) 970, 1398
BslFI GGGAC 1 cut(s) 741
BslI CCNNNNNNNGG 1 cut(s) 1388
BsmAI GTCTC 2 cut(s) 1255, 1484
BsmFI GGGAC 1 cut(s) 741
BsnI GGCC 1 cut(s) 806
BsoBI CYCGRG 1 cut(s) 969
Bsp119I TTCGAA 1 cut(s) 287
Bsp143I GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
Bsp1720I GCTNAGC 1 cut(s) 94
Bsp19I CCATGG 1 cut(s) 1206
BspACI CCGC 4 cut(s) 535, 538, 737, 1690
BspANI GGCC 1 cut(s) 806
BspDI ATCGAT 3 cut(s) 1016, 1035, 1173
BspFNI CGCG 1 cut(s) 1690
BspHI TCATGA 2 cut(s) 346, 442
BspLI GGNNCC 2 cut(s) 73, 1045
BspMI ACCTGC 2 cut(s) 466, 1752
BspPI GGATC 3 cut(s) 422, 902, 1600
BspT104I TTCGAA 1 cut(s) 287
BspT107I GGYRCC 1 cut(s) 1043
BspTI CTTAAG 1 cut(s) 1637
BsrI ACTGG 5 cut(s) 209, 388, 431, 753, 1498
BssECI CCNNGG 4 cut(s) 807, 969, 970, 1206
BssMI GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
BssNI GRCGYC 1 cut(s) 1044
BssT1I CCWWGG 2 cut(s) 807, 1206
Bst2UI CCWGG 1 cut(s) 1162
Bst4CI ACNGT 4 cut(s) 179, 982, 1266, 1486
BstACI GRCGYC 1 cut(s) 1044
BstAFI CTTAAG 1 cut(s) 1637
BstBI TTCGAA 1 cut(s) 287
BstC8I GCNNGC 1 cut(s) 1293
BstDSI CCRYGG 1 cut(s) 1206
BstF5I GGATG 2 cut(s) 1563, 1648
BstFNI CGCG 1 cut(s) 1690
BstH2I RGCGCY 1 cut(s) 1047
BstHHI GCGC 3 cut(s) 1046, 1082, 1690
BstKTI GATC 9 cut(s) 192, 430, 631, 661, 871, 910, 1020, 1252, 1595
BstMAI GTCTC 2 cut(s) 1255, 1484
BstMBI GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
BstMWI GCNNNNNNNGC 4 cut(s) 350, 835, 1009, 1325
BstNI CCWGG 1 cut(s) 1162
BstSCI CCNGG 3 cut(s) 968, 969, 1160
BstSFI CTRYAG 1 cut(s) 958
BstUI CGCG 1 cut(s) 1690
BstV1I GCAGC 3 cut(s) 160, 223, 982
BstV2I GAAGAC 2 cut(s) 566, 1105
BstX2I RGATCY 3 cut(s) 658, 1249, 1592
BstXI CCANNNNNNTGG 1 cut(s) 592
BstYI RGATCY 3 cut(s) 658, 1249, 1592
Bsu15I ATCGAT 3 cut(s) 1016, 1035, 1173
BsuRI GGCC 1 cut(s) 806
BsuTUI ATCGAT 3 cut(s) 1016, 1035, 1173
BtgI CCRYGG 1 cut(s) 1206
BtgZI GCGATG 1 cut(s) 1013
BtsCI GGATG 2 cut(s) 1563, 1648
BtsIMutI CAGTG 2 cut(s) 184, 638
BveI ACCTGC 2 cut(s) 466, 1752
Cac8I GCNNGC 1 cut(s) 1293
CaiI CAGNNNCTG 1 cut(s) 672
CciI TCATGA 2 cut(s) 346, 442
CfoI GCGC 3 cut(s) 1046, 1082, 1690
Cfr13I GGNCC 1 cut(s) 72
Cfr9I CCCGGG 1 cut(s) 969
ClaI ATCGAT 3 cut(s) 1016, 1035, 1173
Csp6I GTAC 3 cut(s) 1270, 1353, 1537
CviAII CATG 6 cut(s) 347, 443, 1207, 1540, 1601, 1758
CviQI GTAC 3 cut(s) 1270, 1353, 1537
DinI GGCGCC 1 cut(s) 1045
DpnI GATC 9 cut(s) 191, 429, 630, 660, 870, 909, 1019, 1251, 1594
DpnII GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
DraI TTTAAA 1 cut(s) 1422
DriI GACNNNNNGTC 1 cut(s) 1675
Eam1105I GACNNNNNGTC 1 cut(s) 1675
Eco130I CCWWGG 2 cut(s) 807, 1206
Eco147I AGGCCT 1 cut(s) 806
Eco32I GATATC 2 cut(s) 859, 1177
Eco47I GGWCC 1 cut(s) 72
Eco57I CTGAAG 2 cut(s) 129, 1266
Eco88I CYCGRG 1 cut(s) 969
EcoRI GAATTC 1 cut(s) 964
EcoRII CCWGG 1 cut(s) 1160
EcoRV GATATC 2 cut(s) 859, 1177
EcoT14I CCWWGG 2 cut(s) 807, 1206
EcoT22I ATGCAT 3 cut(s) 230, 1054, 1172
EgeI GGCGCC 1 cut(s) 1045
EheI GGCGCC 1 cut(s) 1045
ErhI CCWWGG 2 cut(s) 807, 1206
FaeI CATG 6 cut(s) 350, 446, 1210, 1543, 1604, 1761
FalI AAGNNNNNCTT 2 cut(s) 82, 114
FaqI GGGAC 1 cut(s) 741
FatI CATG 6 cut(s) 346, 442, 1206, 1539, 1600, 1757
FauI CCCGC 1 cut(s) 744
FauNDI CATATG 2 cut(s) 1437, 1513
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 1 cut(s) 454
Fnu4HI GCNGC 5 cut(s) 149, 237, 536, 539, 996
FokI GGATG 2 cut(s) 1550, 1655
Fsp4HI GCNGC 5 cut(s) 149, 237, 536, 539, 996
FspBI CTAG 6 cut(s) 518, 866, 1152, 1214, 1274, 1529
GlaI GCGC 3 cut(s) 1045, 1081, 1689
GluI GCNGC 5 cut(s) 149, 237, 536, 539, 996
GsuI CTGGAG 1 cut(s) 1238
HaeII RGCGCY 1 cut(s) 1047
HaeIII GGCC 1 cut(s) 806
HapII CCGG 2 cut(s) 970, 1398
HhaI GCGC 3 cut(s) 1046, 1082, 1690
Hin1I GRCGYC 1 cut(s) 1044
Hin1II CATG 6 cut(s) 350, 446, 1210, 1543, 1604, 1761
Hin6I GCGC 3 cut(s) 1044, 1080, 1688
HinP1I GCGC 3 cut(s) 1044, 1080, 1688
HincII GTYRAC 3 cut(s) 455, 615, 1395
HindII GTYRAC 3 cut(s) 455, 615, 1395
HindIII AAGCTT 2 cut(s) 351, 836
HinfI GANTC 8 cut(s) 616, 786, 812, 851, 928, 1148, 1408, 1676
HpaI GTTAAC 1 cut(s) 1395
HpaII CCGG 2 cut(s) 970, 1398
HphI GGTGA 2 cut(s) 959, 1368
Hpy166II GTNNAC 6 cut(s) 455, 615, 955, 1062, 1365, 1395
Hpy188I TCNGA 9 cut(s) 166, 658, 769, 817, 856, 912, 1057, 1069, 1522
Hpy8I GTNNAC 6 cut(s) 455, 615, 955, 1062, 1365, 1395
Hpy99I CGWCG 2 cut(s) 1562, 1574
HpyAV CCTTC 5 cut(s) 1343, 1392, 1494, 1582, 1728
HpyCH4III ACNGT 4 cut(s) 179, 982, 1266, 1486
HpyCH4IV ACGT 2 cut(s) 1075, 1344
HpyCH4V TGCA 8 cut(s) 185, 228, 239, 886, 1052, 1170, 1441, 1747
HpyF10VI GCNNNNNNNGC 4 cut(s) 350, 835, 1009, 1325
HpySE526I ACGT 2 cut(s) 1075, 1344
Hsp92I GRCGYC 1 cut(s) 1044
Hsp92II CATG 6 cut(s) 350, 446, 1210, 1543, 1604, 1761
HspAI GCGC 3 cut(s) 1044, 1080, 1688
KasI GGCGCC 1 cut(s) 1043
Ksp22I TGATCA 1 cut(s) 628
KspAI GTTAAC 1 cut(s) 1395
Kzo9I GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
LmnI GCTCC 2 cut(s) 140, 335
Lsp1109I GCAGC 3 cut(s) 160, 223, 982
LweI GCATC 5 cut(s) 172, 215, 990, 1061, 1179
MaeI CTAG 6 cut(s) 518, 866, 1152, 1214, 1274, 1529
MaeII ACGT 2 cut(s) 1075, 1344
MaeIII GTNAC 5 cut(s) 324, 545, 974, 1340, 1374
MalI GATC 9 cut(s) 191, 429, 630, 660, 870, 909, 1019, 1251, 1594
MboI GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
MfeI CAATTG 2 cut(s) 479, 604
MflI RGATCY 3 cut(s) 658, 1249, 1592
MluCI AATT 7 cut(s) 160, 282, 479, 604, 773, 795, 964
Mly113I GGCGCC 1 cut(s) 1044
MlyI GAGTC 4 cut(s) 610, 860, 1417, 1685
MmeI TCCRAC 1 cut(s) 1334
MnlI CCTC 8 cut(s) 403, 505, 645, 702, 1389, 1443, 1516, 1577
Mph1103I ATGCAT 3 cut(s) 230, 1054, 1172
MseI TTAA 8 cut(s) 267, 392, 714, 1086, 1094, 1394, 1421, 1638
MslI CAYNNNNRTG 3 cut(s) 590, 1225, 1238
MspA1I CMGCKG 1 cut(s) 535
MspCI CTTAAG 1 cut(s) 1637
MspI CCGG 2 cut(s) 970, 1398
MspR9I CCNGG 3 cut(s) 970, 971, 1162
MunI CAATTG 2 cut(s) 479, 604
MvaI CCWGG 1 cut(s) 1162
MvnI CGCG 1 cut(s) 1690
MwoI GCNNNNNNNGC 4 cut(s) 350, 835, 1009, 1325
NarI GGCGCC 1 cut(s) 1044
NciI CCSGG 2 cut(s) 970, 971
NcoI CCATGG 1 cut(s) 1206
NdeI CATATG 2 cut(s) 1437, 1513
NdeII GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
NlaIII CATG 6 cut(s) 350, 446, 1210, 1543, 1604, 1761
NlaIV GGNNCC 2 cut(s) 73, 1045
NmeAIII GCCGAG 1 cut(s) 949
NmuCI GTSAC 1 cut(s) 1374
NsiI ATGCAT 3 cut(s) 230, 1054, 1172
NspV TTCGAA 1 cut(s) 287
OliI CACNNNNGTG 1 cut(s) 1225
PagI TCATGA 2 cut(s) 346, 442
PceI AGGCCT 1 cut(s) 806
PcsI WCGNNNNNNNCGW 1 cut(s) 1566
PfeI GAWTC 4 cut(s) 786, 812, 928, 1148
PflFI GACNNNGTC 1 cut(s) 850
PkrI GCNGC 5 cut(s) 150, 238, 537, 540, 997
PleI GAGTC 4 cut(s) 610, 859, 1416, 1684
PluTI GGCGCC 1 cut(s) 1047
PpsI GAGTC 4 cut(s) 610, 859, 1416, 1684
Psp6I CCWGG 1 cut(s) 1160
PspGI CCWGG 1 cut(s) 1160
PspN4I GGNNCC 2 cut(s) 73, 1045
PspPI GGNCC 1 cut(s) 72
PstNI CAGNNNCTG 1 cut(s) 672
PsuI RGATCY 3 cut(s) 658, 1249, 1592
PsyI GACNNNGTC 1 cut(s) 850
RsaI GTAC 3 cut(s) 1271, 1354, 1538
RsaNI GTAC 3 cut(s) 1270, 1353, 1537
RseI CAYNNNNRTG 3 cut(s) 590, 1225, 1238
SalI GTCGAC 1 cut(s) 453
SaqAI TTAA 8 cut(s) 267, 392, 714, 1086, 1094, 1394, 1421, 1638
SatI GCNGC 5 cut(s) 149, 237, 536, 539, 996
Sau3AI GATC 9 cut(s) 189, 427, 628, 658, 868, 907, 1017, 1249, 1592
Sau96I GGNCC 1 cut(s) 72
SchI GAGTC 4 cut(s) 610, 860, 1417, 1685
ScrFI CCNGG 3 cut(s) 970, 971, 1162
SfaNI GCATC 5 cut(s) 172, 215, 990, 1061, 1179
SfcI CTRYAG 1 cut(s) 958
SfoI GGCGCC 1 cut(s) 1045
SfuI TTCGAA 1 cut(s) 287
SinI GGWCC 1 cut(s) 72
SmaI CCCGGG 1 cut(s) 971
SmiMI CAYNNNNRTG 3 cut(s) 590, 1225, 1238
SmlI CTYRAG 5 cut(s) 143, 367, 800, 1405, 1637
SmoI CTYRAG 5 cut(s) 143, 367, 800, 1405, 1637
Sse9I AATT 7 cut(s) 160, 282, 479, 604, 773, 795, 964
SseBI AGGCCT 1 cut(s) 806
SsiI CCGC 4 cut(s) 535, 538, 737, 1690
SspDI GGCGCC 1 cut(s) 1043
SspMI CTAG 6 cut(s) 518, 866, 1152, 1214, 1274, 1529
StuI AGGCCT 1 cut(s) 806
StyD4I CCNGG 3 cut(s) 968, 969, 1160
StyI CCWWGG 2 cut(s) 807, 1206
TaaI ACNGT 4 cut(s) 179, 982, 1266, 1486
TaiI ACGT 2 cut(s) 1078, 1347
TasI AATT 7 cut(s) 160, 282, 479, 604, 773, 795, 964
TatI WGTACW 1 cut(s) 1536
TauI GCSGC 2 cut(s) 538, 541
TfiI GAWTC 4 cut(s) 786, 812, 928, 1148
Tru1I TTAA 8 cut(s) 267, 392, 714, 1086, 1094, 1394, 1421, 1638
Tru9I TTAA 8 cut(s) 267, 392, 714, 1086, 1094, 1394, 1421, 1638
TscAI CASTG 2 cut(s) 184, 638
TseFI GTSAC 1 cut(s) 1374
TseI GCWGC 3 cut(s) 148, 236, 995
Tsp45I GTSAC 1 cut(s) 1374
TspDTI ATGAA 7 cut(s) 209, 363, 513, 977, 1493, 1617, 1698
TspGWI ACGGA 2 cut(s) 1086, 1328
TspMI CCCGGG 1 cut(s) 969
TspRI CASTG 2 cut(s) 184, 638
Tth111I GACNNNGTC 1 cut(s) 850
Vha464I CTTAAG 1 cut(s) 1637
VpaK11BI GGWCC 1 cut(s) 72
XapI RAATTY 3 cut(s) 282, 795, 964
XbaI TCTAGA 3 cut(s) 865, 1213, 1528
XmaI CCCGGG 1 cut(s) 969
XmiI GTMKAC 1 cut(s) 454
XspI CTAG 6 cut(s) 518, 866, 1152, 1214, 1274, 1529
Zsp2I ATGCAT 3 cut(s) 230, 1054, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.