Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Forward (+)

17102703 .. 17108027

Gene Structure 5325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00095740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGAAAGAAGGTAAACCGCAGTATCTGATGTCTGAATTGGTTCCTCACGGTGGGGTTGGCTACGAGGCCTTCAAGGTTTTCTTGAACTATTTGTACACCGGGAAGCTTAAGCCATCGCCTCCAGAAGTGTCGACATGTGTTGAGAATGTTTGTGCTCATGATGCATGTGGCCCTGCTATTAACTATGCTGTGGAATTGATGTATGCTTCTTCCACGTTTCAAATGAAGGAGCTTGTTCAAGTTGTTCAGCGCCGTCTTTGGAACTTTGTTGACAAAGCTCTTGTTGAAGATGTGATCCCAATTCTTGTAGCTGCTTTCCACTGCCAACTGAGTCAGCTGCTCTCACACTGTGTTCAGAGGGTCTCAAGGTCAGATCTTGACAATGTGGCTCTAGAGAAAGAGCTTCCTCATGAAGTTTTAGTTGATATAAAATCACTCCGTCTCGAATCTCAGGAAAAGGATGAATCAATTATGCTGGAGAAGGAGCCGAGGGAGGATAAGAGGCTTAAAGGCATCAGGAGAATCCACAGGGCATTAGACTCTGATGATGTTGAACTTGTTACCCTTCTTCTGAATGAGTCTGATTCTATCACATTAGATGATGCTCACGCTCTCCACTATGCTGCTGCATACTGTGATCCTAAGATTGTTAAGGAGATTCTTGGTCTAGGGTTGGCAGATGTGAACCTTCGCAATGCACGAGAACATACTGTGCTTCATGTGGCAGCAAGGCGTAAGGAGCCATCAGTTATAGTTCATCTTCTGAACAAGGGAGCCTCTGCCTTAGAAACTACATCAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGAATCTAATAAAGACCGAATGTGTATAGATCTTCTAGAGAGAGAGATGCGAAGAAACTCAATATGTGGGAACTTGTCAAACACATCACAGATGGTAGCTGATAATATTCACGTGAGCCTGAGCTATCTAGAAAATAGAGTGGCATTTGCACATTTGTTGTTTCCTATCGAAGCCAAGCTTGCTATGGAAATGGCAGATGCTGATTTAACATCAGGGTACACTGGCCTTTCAGGATCAAGAACCTCAAATGGAAACTTATGTGAGGTTGATTTGAATGAAACACCCTCTGGAAGGGCCAAAAGACTCCAAGAAAAATTGCAAACCCTTATTAAAACAGGTATGGTTCCTTTACTTGTGACAACTGATATGTCTAAAGGTAGACAGCTGTATGTAACATTGCAACTGGAACTAGTGGAAAAGGGTCGCCGCTTCTTCCCCCATTGCTCAGCAGTGCTTGATAAGTTCTTGGATGATCTCGGTATGGGTGATTACTTTCTCGAGAAAGGCACTCCTGAAGAGCAGAAAAACAAGAAGAGGCGTTTCTTGGAACTCAAGGCCGATGTACAGAAGGCATTTAGCAAGGACATGGCTGAAAAGGCTGAAAATAACCAGTCTGTTTTGACATCCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

502

Amino Acids

56.39

Weight (kDa)

6.02

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3420	PF11900	125 - 176	2.7e-10	Domain of unknown function (DUF3420)
Ank_2	PF12796	205 - 275	5.1e-07	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	276 - 404	8.9e-43	NPR1/NIM1 like defence protein C terminal
NPR1_like_C	PF12313	429 - 501	1.2e-23	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	852
AccI	GTMKAC	2 cut(s)	131, 1255
AciI	CCGC	2 cut(s)	17, 1303
AclWI	GGATC	3 cut(s)	289, 632, 1117
AcuI	CTGAAG	1 cut(s)	1410
AcvI	CACGTG	1 cut(s)	988
AdeI	CACNNNGTG	1 cut(s)	350
AfaI	GTAC	3 cut(s)	95, 1094, 1440
AfiI	CCNNNNNNNGG	2 cut(s)	50, 1167
AflII	CTTAAG	1 cut(s)	107
AflIII	ACRYGT	1 cut(s)	134
AgsI	TTSAA	7 cut(s)	73, 85, 221, 239, 287, 554, 1150
AhlI	ACTAGT	1 cut(s)	1285
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	2 cut(s)	367, 446
AlwI	GGATC	3 cut(s)	289, 632, 1117
AlwNI	CAGNNNCTG	2 cut(s)	25, 1076
Ama87I	CYCGRG	1 cut(s)	1373
AoxI	GGCC	5 cut(s)	66, 169, 1099, 1170, 1431
ApeKI	GCWGC	5 cut(s)	311, 337, 623, 626, 725
Asp700I	GAANNNNTTC	1 cut(s)	39
AspLEI	GCGC	1 cut(s)	252
AspS9I	GGNCC	2 cut(s)	170, 1170
AsuC2I	CCSGG	1 cut(s)	100
AsuHPI	GGTGA	1 cut(s)	1373
AvaI	CYCGRG	1 cut(s)	1373
BaeI	ACNNNNGTAYC	1 cut(s)	38
BauI	CACGAG	1 cut(s)	699
BbrPI	CACGTG	1 cut(s)	988
Bbv12I	GWGCWC	1 cut(s)	157
BbvI	GCAGC	5 cut(s)	298, 324, 610, 613, 737
BccI	CCATC	4 cut(s)	121, 751, 794, 961
BceAI	ACGGC	1 cut(s)	237
BcnI	CCSGG	1 cut(s)	100
BcoDI	GTCTC	2 cut(s)	367, 446
BcuI	ACTAGT	1 cut(s)	1285
BfaI	CTAG	6 cut(s)	392, 668, 837, 911, 1004, 1286
BfoI	RGCGCY	1 cut(s)	253
BfrI	CTTAAG	1 cut(s)	107
BglII	AGATCT	2 cut(s)	373, 904
BisI	GCNGC	6 cut(s)	312, 338, 624, 627, 726, 1303
BlpI	GCTNAGC	1 cut(s)	1321
BlsI	GCNGC	6 cut(s)	313, 339, 625, 628, 727, 1304
Bme1390I	CCNGG	1 cut(s)	100
BmeT110I	CYCGRG	1 cut(s)	1373
BmgT120I	GGNCC	2 cut(s)	170, 1170
BmiI	GGNNCC	5 cut(s)	42, 486, 741, 775, 1221
BmrFI	CCNGG	1 cut(s)	100
BmsI	GCATC	5 cut(s)	151, 522, 592, 912, 1063
BpmI	CTGGAG	2 cut(s)	105, 497
Bpu10I	CCTNAGC	1 cut(s)	995
Bpu1102I	GCTNAGC	1 cut(s)	1321
BpuEI	CTTGAG	2 cut(s)	349, 1412
BpuMI	CCSGG	1 cut(s)	100
BsaAI	YACGTR	1 cut(s)	988
BsaI	GGTCTC	1 cut(s)	367
BsaJI	CCNNGG	1 cut(s)	488
Bsc4I	CCNNNNNNNGG	2 cut(s)	50, 1167
Bse1I	ACTGG	3 cut(s)	1102, 1284, 1486
Bse3DI	GCAATG	3 cut(s)	700, 1271, 1315
BseDI	CCNNGG	1 cut(s)	488
BseGI	GGATG	3 cut(s)	466, 1351, 1499
BseLI	CCNNNNNNNGG	2 cut(s)	50, 1167
BseMI	GCAATG	3 cut(s)	700, 1271, 1315
BseMII	CTCAG	4 cut(s)	320, 464, 986, 1335
BseNI	ACTGG	3 cut(s)	1102, 1284, 1486
BseXI	GCAGC	5 cut(s)	298, 324, 610, 613, 737
BshFI	GGCC	5 cut(s)	68, 171, 1101, 1172, 1433
BsiHKAI	GWGCWC	1 cut(s)	157
BsiHKCI	CYCGRG	1 cut(s)	1373
BsiSI	CCGG	2 cut(s)	99, 826
BslI	CCNNNNNNNGG	2 cut(s)	50, 1167
BsmAI	GTCTC	2 cut(s)	367, 446
BsmBI	CGTCTC	1 cut(s)	446
BsnI	GGCC	5 cut(s)	68, 171, 1101, 1172, 1433
Bso31I	GGTCTC	1 cut(s)	367
BsoBI	CYCGRG	1 cut(s)	1373
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp1407I	TGTACA	2 cut(s)	93, 1438
Bsp143I	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
Bsp1720I	GCTNAGC	1 cut(s)	1321
BspACI	CCGC	2 cut(s)	17, 1303
BspANI	GGCC	5 cut(s)	68, 171, 1101, 1172, 1433
BspCNI	CTCAG	4 cut(s)	321, 463, 987, 1334
BspHI	TCATGA	3 cut(s)	157, 409, 1505
BspLI	GGNNCC	5 cut(s)	42, 486, 741, 775, 1221
BspPI	GGATC	3 cut(s)	289, 632, 1117
BspQI	GCTCTTC	1 cut(s)	1386
BspTI	CTTAAG	1 cut(s)	107
BspTNI	GGTCTC	1 cut(s)	367
BsrDI	GCAATG	3 cut(s)	700, 1271, 1315
BsrGI	TGTACA	2 cut(s)	93, 1438
BsrI	ACTGG	3 cut(s)	1102, 1284, 1486
BssECI	CCNNGG	1 cut(s)	488
BssMI	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
BssSI	CACGAG	1 cut(s)	699
Bst2BI	CACGAG	1 cut(s)	699
Bst4CI	ACNGT	4 cut(s)	50, 350, 635, 712
Bst6I	CTCTTC	2 cut(s)	1386, 1403
BstAFI	CTTAAG	1 cut(s)	107
BstAUI	TGTACA	2 cut(s)	93, 1438
BstBAI	YACGTR	1 cut(s)	988
BstC8I	GCNNGC	1 cut(s)	1056
BstDEI	CTNAG	6 cut(s)	329, 450, 642, 784, 995, 1321
BstENI	CCTNNNNNAGG	1 cut(s)	1165
BstF5I	GGATG	3 cut(s)	466, 1351, 1499
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	252
BstKTI	GATC	6 cut(s)	297, 376, 640, 907, 1112, 1351
BstMAI	GTCTC	2 cut(s)	367, 446
BstMBI	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
BstMWI	GCNNNNNNNGC	4 cut(s)	161, 739, 1055, 1472
BstNSI	RCATGY	2 cut(s)	138, 168
BstSCI	CCNGG	1 cut(s)	98
BstV1I	GCAGC	5 cut(s)	298, 324, 610, 613, 737
BstX2I	RGATCY	2 cut(s)	373, 904
BstYI	RGATCY	2 cut(s)	373, 904
BsuRI	GGCC	5 cut(s)	68, 171, 1101, 1172, 1433
BtgZI	GCGATG	1 cut(s)	99
BtsCI	GGATG	3 cut(s)	466, 1351, 1499
BtsI	GCAGTG	2 cut(s)	319, 1332
BtsIMutI	CAGTG	4 cut(s)	319, 346, 1095, 1332
Cac8I	GCNNGC	1 cut(s)	1056
CaiI	CAGNNNCTG	2 cut(s)	25, 1076
CciI	TCATGA	3 cut(s)	157, 409, 1505
CfoI	GCGC	1 cut(s)	252
Cfr13I	GGNCC	2 cut(s)	170, 1170
Csp6I	GTAC	3 cut(s)	94, 1093, 1439
CviAII	CATG	7 cut(s)	135, 158, 165, 410, 719, 1462, 1506
CviQI	GTAC	3 cut(s)	94, 1093, 1439
DdeI	CTNAG	6 cut(s)	329, 450, 642, 784, 995, 1321
DpnI	GATC	6 cut(s)	296, 375, 639, 906, 1111, 1350
DpnII	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
DraIII	CACNNNGTG	1 cut(s)	350
Eam1104I	CTCTTC	2 cut(s)	1386, 1403
EarI	CTCTTC	2 cut(s)	1386, 1403
Eco147I	AGGCCT	1 cut(s)	68
Eco31I	GGTCTC	1 cut(s)	367
Eco57I	CTGAAG	1 cut(s)	1410
Eco72I	CACGTG	1 cut(s)	988
Eco88I	CYCGRG	1 cut(s)	1373
EcoNI	CCTNNNNNAGG	1 cut(s)	1165
EcoT22I	ATGCAT	1 cut(s)	166
Esp3I	CGTCTC	1 cut(s)	446
FaeI	CATG	7 cut(s)	138, 161, 168, 413, 722, 1465, 1509
FalI	AAGNNNNNCTT	4 cut(s)	65, 97, 1038, 1070
FatI	CATG	7 cut(s)	134, 157, 164, 409, 718, 1461, 1505
FblI	GTMKAC	2 cut(s)	131, 1255
Fnu4HI	GCNGC	6 cut(s)	312, 338, 624, 627, 726, 1303
FokI	GGATG	3 cut(s)	473, 1358, 1486
Fsp4HI	GCNGC	6 cut(s)	312, 338, 624, 627, 726, 1303
FspBI	CTAG	6 cut(s)	392, 668, 837, 911, 1004, 1286
GlaI	GCGC	1 cut(s)	251
GluI	GCNGC	6 cut(s)	312, 338, 624, 627, 726, 1303
GsuI	CTGGAG	2 cut(s)	105, 497
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	5 cut(s)	68, 171, 1101, 1172, 1433
HapII	CCGG	2 cut(s)	99, 826
HhaI	GCGC	1 cut(s)	252
Hin1II	CATG	7 cut(s)	138, 161, 168, 413, 722, 1465, 1509
Hin6I	GCGC	1 cut(s)	250
HinP1I	GCGC	1 cut(s)	250
HincII	GTYRAC	3 cut(s)	132, 271, 834
HindII	GTYRAC	3 cut(s)	132, 271, 834
HindIII	AAGCTT	2 cut(s)	104, 1052
HpaII	CCGG	2 cut(s)	99, 826
HphI	GGTGA	1 cut(s)	1373
Hpy166II	GTNNAC	8 cut(s)	14, 96, 132, 271, 685, 834, 1095, 1256
Hpy188I	TCNGA	9 cut(s)	27, 34, 357, 373, 544, 573, 583, 765, 799
Hpy8I	GTNNAC	8 cut(s)	14, 96, 132, 271, 685, 834, 1095, 1256
HpyAV	CCTTC	7 cut(s)	79, 220, 475, 575, 698, 1161, 1438
HpyCH4III	ACNGT	4 cut(s)	50, 350, 635, 712
HpyCH4IV	ACGT	2 cut(s)	215, 987
HpyCH4V	TGCA	7 cut(s)	164, 629, 698, 818, 1025, 1195, 1276
HpyF10VI	GCNNNNNNNGC	4 cut(s)	161, 739, 1055, 1472
HpyF3I	CTNAG	6 cut(s)	329, 450, 642, 784, 995, 1321
HpySE526I	ACGT	2 cut(s)	215, 987
Hsp92II	CATG	7 cut(s)	138, 161, 168, 413, 722, 1465, 1509
HspAI	GCGC	1 cut(s)	250
Kzo9I	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
LguI	GCTCTTC	1 cut(s)	1386
LmnI	GCTCC	4 cut(s)	229, 484, 739, 773
Lsp1109I	GCAGC	5 cut(s)	298, 324, 610, 613, 737
LweI	GCATC	5 cut(s)	151, 522, 592, 912, 1063
MaeI	CTAG	6 cut(s)	392, 668, 837, 911, 1004, 1286
MaeII	ACGT	2 cut(s)	215, 987
MaeIII	GTNAC	3 cut(s)	559, 1231, 1267
MalI	GATC	6 cut(s)	296, 375, 639, 906, 1111, 1350
MboI	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
MboII	GAAGA	9 cut(s)	201, 299, 560, 752, 899, 939, 1300, 1403, 1420
MflI	RGATCY	2 cut(s)	373, 904
MhlI	GDGCHC	1 cut(s)	157
MluCI	AATT	6 cut(s)	35, 194, 300, 468, 819, 1190
MlyI	GAGTC	4 cut(s)	340, 533, 587, 1173
Mph1103I	ATGCAT	1 cut(s)	166
MroXI	GAANNNNTTC	1 cut(s)	39
MseI	TTAA	6 cut(s)	108, 180, 507, 651, 1082, 1206
MslI	CAYNNNNRTG	1 cut(s)	1504
MspA1I	CMGCKG	2 cut(s)	337, 1261
MspCI	CTTAAG	1 cut(s)	107
MspI	CCGG	2 cut(s)	99, 826
MspR9I	CCNGG	1 cut(s)	100
MwoI	GCNNNNNNNGC	4 cut(s)	161, 739, 1055, 1472
NciI	CCSGG	1 cut(s)	100
NdeII	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
NlaIII	CATG	7 cut(s)	138, 161, 168, 413, 722, 1465, 1509
NlaIV	GGNNCC	5 cut(s)	42, 486, 741, 775, 1221
NmeAIII	GCCGAG	1 cut(s)	513
NmuCI	GTSAC	1 cut(s)	1231
NsiI	ATGCAT	1 cut(s)	166
NspI	RCATGY	2 cut(s)	138, 168
PaeR7I	CTCGAG	1 cut(s)	1373
PagI	TCATGA	3 cut(s)	157, 409, 1505
PceI	AGGCCT	1 cut(s)	68
PciI	ACATGT	1 cut(s)	134
PciSI	GCTCTTC	1 cut(s)	1386
PcsI	WCGNNNNNNNCGW	1 cut(s)	697
PdmI	GAANNNNTTC	1 cut(s)	39
PfeI	GAWTC	6 cut(s)	446, 464, 522, 584, 658, 878
PkrI	GCNGC	6 cut(s)	313, 339, 625, 628, 727, 1304
PleI	GAGTC	4 cut(s)	339, 533, 586, 1173
PmaCI	CACGTG	1 cut(s)	988
PmlI	CACGTG	1 cut(s)	988
PpsI	GAGTC	4 cut(s)	339, 533, 586, 1173
Ppu21I	YACGTR	1 cut(s)	988
PscI	ACATGT	1 cut(s)	134
PsiI	TTATAA	1 cut(s)	852
PspCI	CACGTG	1 cut(s)	988
PspN4I	GGNNCC	5 cut(s)	42, 486, 741, 775, 1221
PspPI	GGNCC	2 cut(s)	170, 1170
PsrI	GAACNNNNNNTAC	2 cut(s)	77, 109
PstNI	CAGNNNCTG	2 cut(s)	25, 1076
PsuI	RGATCY	2 cut(s)	373, 904
PvuII	CAGCTG	2 cut(s)	337, 1261
RsaI	GTAC	3 cut(s)	95, 1094, 1440
RsaNI	GTAC	3 cut(s)	94, 1093, 1439
RseI	CAYNNNNRTG	1 cut(s)	1504
SalI	GTCGAC	1 cut(s)	130
SapI	GCTCTTC	1 cut(s)	1386
SaqAI	TTAA	6 cut(s)	108, 180, 507, 651, 1082, 1206
SatI	GCNGC	6 cut(s)	312, 338, 624, 627, 726, 1303
Sau3AI	GATC	6 cut(s)	294, 373, 637, 904, 1109, 1348
Sau96I	GGNCC	2 cut(s)	170, 1170
SchI	GAGTC	4 cut(s)	340, 533, 587, 1173
ScrFI	CCNGG	1 cut(s)	100
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	5 cut(s)	151, 522, 592, 912, 1063
Sfr274I	CTCGAG	1 cut(s)	1373
SlaI	CTCGAG	1 cut(s)	1373
SmiMI	CAYNNNNRTG	1 cut(s)	1504
SmlI	CTYRAG	4 cut(s)	107, 364, 1373, 1427
SmoI	CTYRAG	4 cut(s)	107, 364, 1373, 1427
SpeI	ACTAGT	1 cut(s)	1285
Sse9I	AATT	6 cut(s)	35, 194, 300, 468, 819, 1190
SseBI	AGGCCT	1 cut(s)	68
SsiI	CCGC	2 cut(s)	17, 1303
SspI	AATATT	1 cut(s)	982
SspMI	CTAG	6 cut(s)	392, 668, 837, 911, 1004, 1286
StuI	AGGCCT	1 cut(s)	68
StyD4I	CCNGG	1 cut(s)	98
TaaI	ACNGT	4 cut(s)	50, 350, 635, 712
TaiI	ACGT	2 cut(s)	218, 990
TaqI	TCGA	4 cut(s)	131, 444, 1044, 1374
TaqII	GACCGA	1 cut(s)	906
TasI	AATT	6 cut(s)	35, 194, 300, 468, 819, 1190
TatI	WGTACW	2 cut(s)	93, 1438
TauI	GCSGC	1 cut(s)	1305
TfiI	GAWTC	6 cut(s)	446, 464, 522, 584, 658, 878
Tru1I	TTAA	6 cut(s)	108, 180, 507, 651, 1082, 1206
Tru9I	TTAA	6 cut(s)	108, 180, 507, 651, 1082, 1206
TscAI	CASTG	4 cut(s)	326, 353, 1102, 1332
TseFI	GTSAC	1 cut(s)	1231
TseI	GCWGC	5 cut(s)	311, 337, 623, 626, 725
Tsp45I	GTSAC	1 cut(s)	1231
TspDTI	ATGAA	7 cut(s)	17, 239, 426, 477, 707, 746, 1167
TspGWI	ACGGA	1 cut(s)	428
TspRI	CASTG	4 cut(s)	326, 353, 1102, 1332
Vha464I	CTTAAG	1 cut(s)	107
XagI	CCTNNNNNAGG	1 cut(s)	1165
XbaI	TCTAGA	3 cut(s)	391, 910, 1003
XceI	RCATGY	2 cut(s)	138, 168
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1057
XhoI	CTCGAG	1 cut(s)	1373
XmiI	GTMKAC	2 cut(s)	131, 1255
XmnI	GAANNNNTTC	1 cut(s)	39
XspI	CTAG	6 cut(s)	392, 668, 837, 911, 1004, 1286
Zsp2I	ATGCAT	1 cut(s)	166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.