Prupe.4G107500_v2.0.a1

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000570
Physical Location & Seq
Reverse (-)
5613819 .. 5616815
2997 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G107500.3

Sequence Viewer

Length: 1776 bp
ATGGCTAATTATTCAGCTGAACCTTCATCCTCTTTGACCTTCACCTCATCTTCCCATATACCAAACGCTTCAAAAACCCACAACAACCCATCTTCCTCCTCTGGTTGCGAACCTGTGCCTAGCCTTGAAGTCATCAGTTTGACCAAGCTCAGTTCCAATTTGGAGCAGCTGCTCTTGGTTGACTCTAGCTCTGATTACAGTGATGCCGTTATCATCGTTGAGGGAAAATCTGTGGGCGTTTACAGATGCATATTGGCTTCCAGAAGTAGCTTTTTCGGCGAGCTATTCAAGCGAGCAAATGGGTCTTCCGAGAAAGAAGGTAAACCAACGTATTGTATGAGTGATTTGCTGCCTTATGGAAATGTTTTGTATGAAGCTTTCTTGGTTTTCCTAAGCTATGTGTATACTGGAAAGCTGAAGCCTTTTCCCATGGAGGTTTCAACTTGCGTTCACAGTGTATGTGCCCATGACGCATGCGGGCCTGCAATTAATTTTGCTGTGGAATTGATGTATGCATCTTCCGTTTTCCAAATGCCGGATTTGGTTTCAATTCTCCAGCGACGGCTTATTAATTTTGTTGGGAAAGCCCTGGCAGATGATGTCATCCCAATCCTCCTGGTTGGTTTCCATTGTAAGTTGAGTCAGCTCATTGATCAGTGCATAGAGAGAGTGGCACGATCAGATCTTGATAGCATCTCTCTTGAGAAGGAACTTCCTGATGAGATTGTGGAGAAAATTAAAATTATTCGCCACAATTCTCAGCAAGACTGTGACCCCAACATTGCAGCAGTGGACCCCTTGCGTGAAAAGAGAATCAGGAGAATACATAAGGCGTTGGACTCAGATGATGTTGAACTTGTGAAACTTCTTTTAAGTGAGTCTGATATAACCTTAGATGAAGCCAATGCTCTCCATTATGCTGCAGCTTACTGCGATCCTAAGGTTGTGACTGAAGTGATTGGTCTGGGTCTGGTTGATGTTAACCTCCGGAATTCTCGGGGTTATACAGTACTTCACATTGCTGTGATGCGCAAAGAGCCATCAATTATAGTATTGCTTCTGACTAAAGGAGCTCGTGTGTCAGAGCTGACATTAGATGGTGAGAGTGCTGTTAGCATTTGCCGGAGGTTGACGAGGGCAAAGGATTATCATTCGAAAACAGAGAGGGGAGAAGAAGCAAACAAAGACCGGATATGCATTGATGTTCTAGAAAGAGAAATGCAGAGGAATCCGATGGCTGCGGATGCGTCTATATCTTCCCAAATAATGCCTGATGACCTGCACATGCAATTGCTGAACCTGGAGAACAGAGTGGCATTTGCCCGATTGTTATTCCCTACTGAAGCCAAGGTAGCCATGGCCATTGCTCATGCCGAAACAACATCTCAATTTTCTGGGCTCTCTTCATTCAAAGGCTCAACTGGGAATTTGATGGATGTTGATTTAAATGAGACTCCTACCGTGCAGAACAAAAGACTCCGTTCTAGGTTAGAAGCTCTCATGAAAACAGTCAGTACGGGTAGATCCTATTTTCCTCATTGCTCGGAAGTCCTGGATAAGTTCATTAAGGACGACCTTCCTGATTTGTTTTTCCTTGAGACGGGCACCCCTGATGAGCAGAAAATAAAGAGGACGCGTTTCATGGAGCTTAAGGAGGAAGTACAAAAGGCATTTAGCAAGGACAAGGCTGCTAAGAACCTCTTTAGGTTGTCTTCATCATCCTCCTCATCATCTCTGAAAAATGTTGGTGAAAATCTGAAGGTTGGGAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0042802 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

592

Amino Acids

65.49

Weight (kDa)

5.98

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000570)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45110 AT5G45110
fragaria_vesca FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa Rorug02G0432800 Rorug05G0051600
rosa_samantha Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1031
Acc36I ACCTGC 1 cut(s) 1287
AccB1I GGYRCC 1 cut(s) 1604
AccI GTMKAC 1 cut(s) 404
AccII CGCG 1 cut(s) 1636
AccIII TCCGGA 1 cut(s) 987
AciI CCGC 2 cut(s) 477, 1241
AclWI GGATC 2 cut(s) 929, 1518
AcoI YGGCCR 1 cut(s) 1359
AcsI RAATTY 2 cut(s) 991, 1426
AcuI CTGAAG 3 cut(s) 437, 972, 1362
AfaI GTAC 3 cut(s) 1011, 1516, 1662
AfiI CCNNNNNNNGG 2 cut(s) 535, 1600
AflII CTTAAG 1 cut(s) 1649
AflIII ACRYGT 1 cut(s) 1634
AgsI TTSAA 7 cut(s) 72, 128, 289, 441, 549, 854, 1411
AjnI CCWGG 4 cut(s) 588, 615, 1299, 1551
Alw21I GWGCWC 1 cut(s) 1075
Alw26I GTCTC 2 cut(s) 1445, 1592
AlwI GGATC 2 cut(s) 929, 1518
Ama87I CYCGRG 1 cut(s) 996
Aor13HI TCCGGA 1 cut(s) 987
AoxI GGCC 2 cut(s) 479, 1359
ApeKI GCWGC 8 cut(s) 166, 169, 349, 785, 920, 923, 1238, 1688
ApoI RAATTY 2 cut(s) 991, 1426
AseI ATTAAT 2 cut(s) 489, 570
AspLEI GCGC 1 cut(s) 1032
AspS9I GGNCC 2 cut(s) 479, 793
AsuHPI GGTGA 3 cut(s) 34, 1112, 1760
AsuII TTCGAA 1 cut(s) 1154
AvaI CYCGRG 1 cut(s) 996
AvaII GGWCC 1 cut(s) 793
AxyI CCTNAGG 1 cut(s) 939
BaeGI GKGCMC 2 cut(s) 466, 1607
BalI TGGCCA 1 cut(s) 1361
BanI GGYRCC 1 cut(s) 1604
BanII GRGCYC 2 cut(s) 1075, 1401
BauI CACGAG 1 cut(s) 1074
BbsI GAAGAC 2 cut(s) 297, 1704
Bbv12I GWGCWC 1 cut(s) 1075
BbvI GCAGC 8 cut(s) 156, 178, 336, 797, 907, 935, 1225, 1675
BccI CCATC 5 cut(s) 97, 1048, 1091, 1228, 1426
BceAI ACGGC 2 cut(s) 191, 578
BciT130I CCWGG 4 cut(s) 590, 617, 1301, 1553
BclI TGATCA 1 cut(s) 652
BcoDI GTCTC 2 cut(s) 1445, 1592
BfaI CTAG 4 cut(s) 120, 186, 1208, 1485
BfmI CTRYAG 1 cut(s) 921
BfrI CTTAAG 1 cut(s) 1649
BfuAI ACCTGC 1 cut(s) 1287
BglII AGATCT 1 cut(s) 682
BisI GCNGC 8 cut(s) 167, 170, 350, 786, 921, 924, 1239, 1689
BlsI GCNGC 8 cut(s) 168, 171, 351, 787, 922, 925, 1240, 1690
BmcAI AGTACT 1 cut(s) 1011
Bme1390I CCNGG 4 cut(s) 590, 617, 1301, 1553
Bme18I GGWCC 1 cut(s) 793
BmeT110I CYCGRG 1 cut(s) 996
BmgT120I GGNCC 2 cut(s) 479, 793
BmiI GGNNCC 2 cut(s) 795, 1606
BmrFI CCNGG 4 cut(s) 590, 617, 1301, 1553
BmrI ACTGGG 1 cut(s) 1431
BmsI GCATC 6 cut(s) 193, 236, 524, 702, 1017, 1234
BmuI ACTGGG 1 cut(s) 1431
BpiI GAAGAC 2 cut(s) 297, 1704
BpmI CTGGAG 2 cut(s) 539, 1322
Bpu10I CCTNAGC 1 cut(s) 392
Bpu14I TTCGAA 1 cut(s) 1154
BpuEI CTTGAG 2 cut(s) 722, 1616
BsaJI CCNNGG 4 cut(s) 429, 588, 1347, 1356
BsaWI WCCGGW 2 cut(s) 987, 1188
BsaXI ACNNNNNCTCC 2 cut(s) 1062, 1092
Bsc4I CCNNNNNNNGG 2 cut(s) 535, 1600
Bse1I ACTGG 2 cut(s) 412, 1426
Bse21I CCTNAGG 1 cut(s) 939
Bse3DI GCAATG 4 cut(s) 780, 1017, 1362, 1537
BseAI TCCGGA 1 cut(s) 987
BseBI CCWGG 4 cut(s) 590, 617, 1301, 1553
BseDI CCNNGG 4 cut(s) 429, 588, 1347, 1356
BseGI GGATG 5 cut(s) 26, 603, 1249, 1441, 1718
BseLI CCNNNNNNNGG 2 cut(s) 535, 1600
BseMI GCAATG 4 cut(s) 780, 1017, 1362, 1537
BseMII CTCAG 3 cut(s) 163, 773, 855
BseNI ACTGG 2 cut(s) 412, 1426
BseRI GAGGAG 2 cut(s) 88, 1714
BseSI GKGCMC 2 cut(s) 466, 1607
BseXI GCAGC 8 cut(s) 156, 178, 336, 797, 907, 935, 1225, 1675
BsgI GTGCAG 2 cut(s) 1265, 1484
Bsh1236I CGCG 1 cut(s) 1636
BshFI GGCC 2 cut(s) 481, 1361
BshNI GGYRCC 1 cut(s) 1604
BsiHKAI GWGCWC 1 cut(s) 1075
BsiHKCI CYCGRG 1 cut(s) 996
BsiSI CCGG 4 cut(s) 536, 988, 1123, 1189
BslI CCNNNNNNNGG 2 cut(s) 535, 1600
BsmAI GTCTC 2 cut(s) 1445, 1592
BsmBI CGTCTC 1 cut(s) 1592
BsnI GGCC 2 cut(s) 481, 1361
BsoBI CYCGRG 1 cut(s) 996
Bsp119I TTCGAA 1 cut(s) 1154
Bsp1286I GDGCHC 4 cut(s) 466, 1075, 1401, 1607
Bsp13I TCCGGA 1 cut(s) 987
Bsp143I GATC 5 cut(s) 652, 677, 682, 934, 1523
Bsp19I CCATGG 2 cut(s) 429, 1356
BspACI CCGC 2 cut(s) 477, 1241
BspANI GGCC 2 cut(s) 481, 1361
BspCNI CTCAG 3 cut(s) 162, 772, 854
BspEI TCCGGA 1 cut(s) 987
BspFNI CGCG 1 cut(s) 1636
BspHI TCATGA 1 cut(s) 1500
BspLI GGNNCC 2 cut(s) 795, 1606
BspMAI CTGCAG 1 cut(s) 925
BspMI ACCTGC 1 cut(s) 1287
BspPI GGATC 2 cut(s) 929, 1518
BspT104I TTCGAA 1 cut(s) 1154
BspT107I GGYRCC 1 cut(s) 1604
BspTI CTTAAG 1 cut(s) 1649
BsrDI GCAATG 4 cut(s) 780, 1017, 1362, 1537
BsrI ACTGG 2 cut(s) 412, 1426
BssECI CCNNGG 4 cut(s) 429, 588, 1347, 1356
BssMI GATC 5 cut(s) 652, 677, 682, 934, 1523
BssNAI GTATAC 1 cut(s) 405
BssSI CACGAG 1 cut(s) 1074
BssT1I CCWWGG 3 cut(s) 429, 1347, 1356
Bst1107I GTATAC 1 cut(s) 405
Bst2BI CACGAG 1 cut(s) 1074
Bst2UI CCWGG 4 cut(s) 590, 617, 1301, 1553
Bst4CI ACNGT 6 cut(s) 200, 455, 770, 1009, 1462, 1510
Bst6I CTCTTC 1 cut(s) 1408
BstAFI CTTAAG 1 cut(s) 1649
BstBI TTCGAA 1 cut(s) 1154
BstC8I GCNNGC 5 cut(s) 281, 294, 475, 479, 483
BstDEI CTNAG 7 cut(s) 149, 392, 759, 841, 892, 939, 1692
BstDSI CCRYGG 2 cut(s) 429, 1356
BstF5I GGATG 5 cut(s) 26, 603, 1249, 1441, 1718
BstFNI CGCG 1 cut(s) 1636
BstHHI GCGC 1 cut(s) 1032
BstKTI GATC 5 cut(s) 655, 680, 685, 937, 1526
BstMAI GTCTC 2 cut(s) 1445, 1592
BstMBI GATC 5 cut(s) 652, 677, 682, 934, 1523
BstMWI GCNNNNNNNGC 6 cut(s) 276, 289, 470, 1036, 1244, 1352
BstNI CCWGG 4 cut(s) 590, 617, 1301, 1553
BstNSI RCATGY 2 cut(s) 477, 1288
BstSCI CCNGG 4 cut(s) 588, 615, 1299, 1551
BstSFI CTRYAG 1 cut(s) 921
BstSLI GKGCMC 2 cut(s) 466, 1607
BstUI CGCG 1 cut(s) 1636
BstV1I GCAGC 8 cut(s) 156, 178, 336, 797, 907, 935, 1225, 1675
BstV2I GAAGAC 2 cut(s) 297, 1704
BstX2I RGATCY 2 cut(s) 682, 1523
BstYI RGATCY 2 cut(s) 682, 1523
BstZ17I GTATAC 1 cut(s) 405
Bsu36I CCTNAGG 1 cut(s) 939
BsuRI GGCC 2 cut(s) 481, 1361
BtgI CCRYGG 2 cut(s) 429, 1356
BtsCI GGATG 5 cut(s) 26, 603, 1249, 1441, 1718
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 4 cut(s) 205, 460, 662, 795
BveI ACCTGC 1 cut(s) 1287
Cac8I GCNNGC 5 cut(s) 281, 294, 475, 479, 483
CciI TCATGA 1 cut(s) 1500
CfoI GCGC 1 cut(s) 1032
Cfr13I GGNCC 2 cut(s) 479, 793
CseI GACGC 3 cut(s) 479, 1236, 1642
Csp6I GTAC 3 cut(s) 1010, 1515, 1661
CviAII CATG 8 cut(s) 430, 467, 474, 1285, 1357, 1370, 1501, 1642
CviQI GTAC 3 cut(s) 1010, 1515, 1661
DdeI CTNAG 7 cut(s) 149, 392, 759, 841, 892, 939, 1692
DpnI GATC 5 cut(s) 654, 679, 684, 936, 1525
DpnII GATC 5 cut(s) 652, 677, 682, 934, 1523
DraI TTTAAA 1 cut(s) 1446
EaeI YGGCCR 1 cut(s) 1359
Eam1104I CTCTTC 1 cut(s) 1408
EarI CTCTTC 1 cut(s) 1408
Ecl136II GAGCTC 1 cut(s) 1073
Eco130I CCWWGG 3 cut(s) 429, 1347, 1356
Eco24I GRGCYC 2 cut(s) 1075, 1401
Eco47I GGWCC 1 cut(s) 793
Eco53kI GAGCTC 1 cut(s) 1073
Eco57I CTGAAG 3 cut(s) 437, 972, 1362
Eco81I CCTNAGG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 996
EcoICRI GAGCTC 1 cut(s) 1073
EcoRI GAATTC 1 cut(s) 991
EcoRII CCWGG 4 cut(s) 588, 615, 1299, 1551
EcoT14I CCWWGG 3 cut(s) 429, 1347, 1356
EcoT22I ATGCAT 3 cut(s) 251, 517, 1199
EcoT38I GRGCYC 2 cut(s) 1075, 1401
ErhI CCWWGG 3 cut(s) 429, 1347, 1356
Esp3I CGTCTC 1 cut(s) 1592
FaeI CATG 8 cut(s) 433, 470, 477, 1288, 1360, 1373, 1504, 1645
FalI AAGNNNNNCTT 2 cut(s) 1685, 1717
FatI CATG 8 cut(s) 429, 466, 473, 1284, 1356, 1369, 1500, 1641
FauI CCCGC 1 cut(s) 470
FbaI TGATCA 1 cut(s) 652
FblI GTMKAC 1 cut(s) 404
Fnu4HI GCNGC 8 cut(s) 167, 170, 350, 786, 921, 924, 1239, 1689
FokI GGATG 5 cut(s) 13, 590, 1256, 1448, 1705
FriOI GRGCYC 2 cut(s) 1075, 1401
Fsp4HI GCNGC 8 cut(s) 167, 170, 350, 786, 921, 924, 1239, 1689
FspBI CTAG 4 cut(s) 120, 186, 1208, 1485
FspI TGCGCA 1 cut(s) 1031
GlaI GCGC 1 cut(s) 1031
GluI GCNGC 8 cut(s) 167, 170, 350, 786, 921, 924, 1239, 1689
GsuI CTGGAG 2 cut(s) 539, 1322
HaeIII GGCC 2 cut(s) 481, 1361
HapII CCGG 4 cut(s) 536, 988, 1123, 1189
HgaI GACGC 3 cut(s) 479, 1236, 1642
HhaI GCGC 1 cut(s) 1032
Hin1II CATG 8 cut(s) 433, 470, 477, 1288, 1360, 1373, 1504, 1645
Hin6I GCGC 1 cut(s) 1030
HinP1I GCGC 1 cut(s) 1030
HincII GTYRAC 3 cut(s) 181, 982, 1131
HindII GTYRAC 3 cut(s) 181, 982, 1131
HindIII AAGCTT 1 cut(s) 375
HinfI GANTC 8 cut(s) 182, 640, 813, 839, 878, 1228, 1453, 1476
HpaI GTTAAC 1 cut(s) 982
HpaII CCGG 4 cut(s) 536, 988, 1123, 1189
HphI GGTGA 3 cut(s) 34, 1112, 1760
Hpy166II GTNNAC 8 cut(s) 181, 241, 323, 405, 451, 793, 982, 1131
Hpy188III TCNNGA 9 cut(s) 261, 686, 701, 716, 817, 988, 1208, 1501, 1580
Hpy8I GTNNAC 8 cut(s) 181, 241, 323, 405, 451, 793, 982, 1131
Hpy99I CGWCG 1 cut(s) 564
HpyAV CCTTC 6 cut(s) 33, 49, 311, 700, 1586, 1753
HpyCH4III ACNGT 6 cut(s) 200, 455, 770, 1009, 1462, 1510
HpyCH4IV ACGT 1 cut(s) 329
HpyF10VI GCNNNNNNNGC 6 cut(s) 276, 289, 470, 1036, 1244, 1352
HpyF3I CTNAG 7 cut(s) 149, 392, 759, 841, 892, 939, 1692
HpySE526I ACGT 1 cut(s) 329
Hsp92II CATG 8 cut(s) 433, 470, 477, 1288, 1360, 1373, 1504, 1645
HspAI GCGC 1 cut(s) 1030
Kpn2I TCCGGA 1 cut(s) 987
Ksp22I TGATCA 1 cut(s) 652
KspAI GTTAAC 1 cut(s) 982
Kzo9I GATC 5 cut(s) 652, 677, 682, 934, 1523
LmnI GCTCC 3 cut(s) 163, 1070, 1645
Lsp1109I GCAGC 8 cut(s) 156, 178, 336, 797, 907, 935, 1225, 1675
LweI GCATC 6 cut(s) 193, 236, 524, 702, 1017, 1234
MaeI CTAG 4 cut(s) 120, 186, 1208, 1485
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 2 cut(s) 770, 946
MalI GATC 5 cut(s) 654, 679, 684, 936, 1525
MboI GATC 5 cut(s) 652, 677, 682, 934, 1523
MboII GAAGA 8 cut(s) 42, 84, 297, 510, 1184, 1248, 1395, 1704
MfeI CAATTG 1 cut(s) 1289
MflI RGATCY 2 cut(s) 682, 1523
MhlI GDGCHC 4 cut(s) 466, 1075, 1401, 1607
MlsI TGGCCA 1 cut(s) 1361
MluI ACGCGT 1 cut(s) 1634
MluNI TGGCCA 1 cut(s) 1361
MlyI GAGTC 6 cut(s) 176, 649, 833, 887, 1447, 1470
MmeI TCCRAC 1 cut(s) 816
Mox20I TGGCCA 1 cut(s) 1361
Mph1103I ATGCAT 3 cut(s) 251, 517, 1199
MroI TCCGGA 1 cut(s) 987
MscI TGGCCA 1 cut(s) 1361
MseI TTAA 8 cut(s) 489, 570, 738, 872, 981, 1445, 1566, 1650
MslI CAYNNNNRTG 1 cut(s) 1022
Msp20I TGGCCA 1 cut(s) 1361
MspA1I CMGCKG 2 cut(s) 17, 169
MspCI CTTAAG 1 cut(s) 1649
MspI CCGG 4 cut(s) 536, 988, 1123, 1189
MspR9I CCNGG 4 cut(s) 590, 617, 1301, 1553
MunI CAATTG 1 cut(s) 1289
MvaI CCWGG 4 cut(s) 590, 617, 1301, 1553
MvnI CGCG 1 cut(s) 1636
MwoI GCNNNNNNNGC 6 cut(s) 276, 289, 470, 1036, 1244, 1352
NcoI CCATGG 2 cut(s) 429, 1356
NdeII GATC 5 cut(s) 652, 677, 682, 934, 1523
NlaIII CATG 8 cut(s) 433, 470, 477, 1288, 1360, 1373, 1504, 1645
NlaIV GGNNCC 2 cut(s) 795, 1606
NmuCI GTSAC 2 cut(s) 770, 946
NsbI TGCGCA 1 cut(s) 1031
NsiI ATGCAT 3 cut(s) 251, 517, 1199
NspI RCATGY 2 cut(s) 477, 1288
NspV TTCGAA 1 cut(s) 1154
PaeI GCATGC 1 cut(s) 477
PagI TCATGA 1 cut(s) 1500
PfeI GAWTC 2 cut(s) 813, 1228
PfoI TCCNGGA 1 cut(s) 1551
PkrI GCNGC 8 cut(s) 168, 171, 351, 787, 922, 925, 1240, 1690
PleI GAGTC 6 cut(s) 176, 648, 833, 886, 1447, 1470
PpsI GAGTC 6 cut(s) 176, 648, 833, 886, 1447, 1470
PshBI ATTAAT 2 cut(s) 489, 570
Psp124BI GAGCTC 1 cut(s) 1075
Psp6I CCWGG 4 cut(s) 588, 615, 1299, 1551
PspGI CCWGG 4 cut(s) 588, 615, 1299, 1551
PspN4I GGNNCC 2 cut(s) 795, 1606
PspPI GGNCC 2 cut(s) 479, 793
PstI CTGCAG 1 cut(s) 925
PsuI RGATCY 2 cut(s) 682, 1523
PvuII CAGCTG 2 cut(s) 17, 169
RsaI GTAC 3 cut(s) 1011, 1516, 1662
RsaNI GTAC 3 cut(s) 1010, 1515, 1661
RseI CAYNNNNRTG 1 cut(s) 1022
SacI GAGCTC 1 cut(s) 1075
SaqAI TTAA 8 cut(s) 489, 570, 738, 872, 981, 1445, 1566, 1650
SatI GCNGC 8 cut(s) 167, 170, 350, 786, 921, 924, 1239, 1689
Sau3AI GATC 5 cut(s) 652, 677, 682, 934, 1523
Sau96I GGNCC 2 cut(s) 479, 793
ScaI AGTACT 1 cut(s) 1011
SchI GAGTC 6 cut(s) 176, 649, 833, 887, 1447, 1470
ScrFI CCNGG 4 cut(s) 590, 617, 1301, 1553
SduI GDGCHC 4 cut(s) 466, 1075, 1401, 1607
SfaNI GCATC 6 cut(s) 193, 236, 524, 702, 1017, 1234
SfcI CTRYAG 1 cut(s) 921
SfuI TTCGAA 1 cut(s) 1154
SinI GGWCC 1 cut(s) 793
SmiI ATTTAAAT 1 cut(s) 1446
SmiMI CAYNNNNRTG 1 cut(s) 1022
SmlI CTYRAG 3 cut(s) 701, 1595, 1649
SmoI CTYRAG 3 cut(s) 701, 1595, 1649
SphI GCATGC 1 cut(s) 477
SsiI CCGC 2 cut(s) 477, 1241
SspMI CTAG 4 cut(s) 120, 186, 1208, 1485
SstI GAGCTC 1 cut(s) 1075
StyD4I CCNGG 4 cut(s) 588, 615, 1299, 1551
StyI CCWWGG 3 cut(s) 429, 1347, 1356
SwaI ATTTAAAT 1 cut(s) 1446
TaaI ACNGT 6 cut(s) 200, 455, 770, 1009, 1462, 1510
TaiI ACGT 1 cut(s) 332
TaqI TCGA 1 cut(s) 1154
TatI WGTACW 2 cut(s) 1009, 1660
TfiI GAWTC 2 cut(s) 813, 1228
Tru1I TTAA 8 cut(s) 489, 570, 738, 872, 981, 1445, 1566, 1650
Tru9I TTAA 8 cut(s) 489, 570, 738, 872, 981, 1445, 1566, 1650
TscAI CASTG 4 cut(s) 205, 460, 662, 795
TseFI GTSAC 2 cut(s) 770, 946
TseI GCWGC 8 cut(s) 166, 169, 349, 785, 920, 923, 1238, 1688
Tsp45I GTSAC 2 cut(s) 770, 946
TspDTI ATGAA 8 cut(s) 15, 387, 912, 1395, 1517, 1552, 1630, 1704
TspGWI ACGGA 2 cut(s) 511, 1469
TspRI CASTG 4 cut(s) 205, 460, 662, 795
Vha464I CTTAAG 1 cut(s) 1649
VpaK11BI GGWCC 1 cut(s) 793
VspI ATTAAT 2 cut(s) 489, 570
XapI RAATTY 2 cut(s) 991, 1426
XbaI TCTAGA 1 cut(s) 1207
XceI RCATGY 2 cut(s) 477, 1288
XcmI CCANNNNNNNNNTGG 1 cut(s) 1354
XmiI GTMKAC 1 cut(s) 404
XspI CTAG 4 cut(s) 120, 186, 1208, 1485
ZrmI AGTACT 1 cut(s) 1011
Zsp2I ATGCAT 3 cut(s) 251, 517, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.