Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Forward (+)

17091044 .. 17095842

Gene Structure 4799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00095720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGTTTCAAGCCATGGATCATTTGAATGACCTTTCGTCATCTTTGAGCTTTGCGTCTTCTTATCTATCGAATGGATCAAGTGGTAACTATGTATCTGCATCGGCCAATTCTCAAAGTACAGAGCATTTGAGTCTGAGCAGACTCAGTGATAACCTTGAGAGGCTGTTGCTTGATTCTCAATATGACTATAGTGATGCGGATATTGTTGTTGAGGGTGTCGCGGTTGGTGTCAATCGGTGTATATTGGCTGCACGCAGTCAGTTTTTCCACGAGCTTTTTAGGAAGGGGAATGATGATTCGAAGAAGGAAGGTAAACCGCAGTATATGATGTCTGAATTGGTTCCTAACGGTGGAGTTGGCTATGAAGCATTCAAGGTAGTCTTGAACTACTTGTACACTGGAAAACTTAAGCCACCGCCTCCAGAAGTATCAACTGTATCAACATGTGTTGATGATAATTGTGCCCATGATGCATGCGGCCCTGCTATTAATTACGCTGTGGAATTGATGTATGCTGCTGCCACTTTCCAGATGAAAGAACTTGTTCATGTTGTGCAGCGCCGGCTTACTAACTTTGTCGAGAAAGCTCTTGTTGAAGACGTGATCCCGATTCTTGTAGCCTCTTTCCACTGCAAACAGAGTCAGCTGCTTTCACACTGCATCCAGAGGGTAGCAAAGTCAGATCTTGACAATGTGGTTCTAGAAAAAGAGCTTCCTCATGAAGTTTTTGAAATTATCAAATCACTCCGTCTCGAATCTCAGCAAATGGATGAATCAAGTATGCTGGAAATGGAGCCGGGGGAGGAAAAGAGGCTTAAAAGCATCGGGAGAATCCACAAGGCATTAGACTCTGATGATGTTGAACTGGTTACTCTTCTTCTAAAAGAGTCTGATTCTATTTCATTAGATGATGCTTATGCTCTTCACTATGCTGTTGCATACTGTGATCCAAAAATTGTTAAGGAGGTTCTTGGTCTACGTCTGGCCAATACCAATCTTCGAAATGCCCGAGGACATACTGTACTTCATGTGGCTGCAAGGCGTAAGGAACCCGCAGTCCTAGTTCCTCTTCTGAACAGCGGAGCCTCTGCCTTAGAAACTACATTAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGTGTCTAACAAAGACCGAATATGCATAGATCTTCTAGAGAGAGAGATGCGAAGAAATTCGATGGCTGTGGACATGTCAAACACATCACAGGTGATAGCTGATGATTTGAATGTGAGGCTGGACTATTTTGAAAATAGAGTGGCATTTGCACGGTTGTTGTTTCCTGCTGAAGCCAAGCTTGCTATGGAAATGGCGGATCATCCAACATCAGGGTACACTGGCCTTTTAGCATCAAAAGGATCTAGTGGGAACTTACGAGAGGTCGATTTGAATGAAACACCCTCTGGACGATCTAAAAGACTCCAAGAAAAATTGCAAGCGCTAATTAAAACAGTGCAAATGGGACGGCGCTTCTTCCCCCATTGCTCAGAAGTTCTTGATAAGTTTCTGGATGATGAGATGGATATGGCTGATTACTTCCTTGAGAAAGGAACTCCTGAAGAGCAGAAAAACAAGAAGACGCGCTTCTTGGAGCTTAAAGATGATGTACAGAAGGCATTTTGCAGGGATGTGGCTGAAAAACAGTCAGTTTTGACGGCCTCATCATCATCCTCATCTTCTCCGAAGGAGGGTGTTAATCGTAAGGTTAGGAAAAGGTCAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

596

Amino Acids

66.53

Weight (kDa)

5.8

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	59 - 148	2.1e-11	BTB/POZ domain
DUF3420	PF11900	228 - 279	1.3e-10	Domain of unknown function (DUF3420)
Ank_2	PF12796	279 - 363	1e-06	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	379 - 580	1.8e-77	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1161
AccI	GTMKAC	1 cut(s)	976
AccII	CGCG	2 cut(s)	221, 1648
AciI	CCGC	8 cut(s)	197, 221, 317, 416, 477, 1053, 1080, 1379
AclWI	GGATC	6 cut(s)	24, 82, 598, 941, 1389, 1432
AcoI	YGGCCR	2 cut(s)	102, 984
AcsI	RAATTY	1 cut(s)	1240
AcuI	CTGAAG	2 cut(s)	1374, 1644
AfaI	GTAC	5 cut(s)	118, 395, 1023, 1400, 1674
AfeI	AGCGCT	1 cut(s)	1506
AfiI	CCNNNNNNNGG	3 cut(s)	350, 1394, 1754
AflII	CTTAAG	1 cut(s)	407
AflIII	ACRYGT	2 cut(s)	443, 1257
AhdI	GACNNNNNGTC	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	601
AloI	GAACNNNNNNTCC	2 cut(s)	1041, 1073
AluBI	AGCT	8 cut(s)	48, 274, 587, 646, 712, 1283, 1363, 1660
AluI	AGCT	8 cut(s)	48, 274, 587, 646, 712, 1283, 1363, 1660
Alw26I	GTCTC	1 cut(s)	755
AlwI	GGATC	6 cut(s)	24, 82, 598, 941, 1389, 1432
Ama87I	CYCGRG	1 cut(s)	1008
Aor51HI	AGCGCT	1 cut(s)	1506
AoxI	GGCC	5 cut(s)	102, 478, 984, 1405, 1722
ApeKI	GCWGC	6 cut(s)	248, 515, 518, 556, 646, 1034
ApoI	RAATTY	1 cut(s)	1240
AseI	ATTAAT	1 cut(s)	489
Asp700I	GAANNNNTTC	3 cut(s)	339, 543, 1240
AspLEI	GCGC	4 cut(s)	561, 1507, 1536, 1650
AspS9I	GGNCC	1 cut(s)	479
AsuC2I	CCSGG	1 cut(s)	798
AsuHPI	GGTGA	1 cut(s)	1288
AsuII	TTCGAA	2 cut(s)	299, 1000
AvaI	CYCGRG	1 cut(s)	1008
BaeGI	GKGCMC	1 cut(s)	466
BalI	TGGCCA	1 cut(s)	986
BauI	CACGAG	1 cut(s)	269
BbsI	GAAGAC	3 cut(s)	48, 603, 1649
BbvI	GCAGC	6 cut(s)	235, 502, 505, 568, 633, 1021
BccI	CCATC	3 cut(s)	1103, 1240, 1579
BceAI	ACGGC	2 cut(s)	1547, 1737
BcnI	CCSGG	1 cut(s)	798
BcoDI	GTCTC	1 cut(s)	755
BfaI	CTAG	5 cut(s)	701, 1061, 1146, 1220, 1428
BfmI	CTRYAG	1 cut(s)	187
BfoI	RGCGCY	3 cut(s)	562, 1508, 1537
BfrI	CTTAAG	1 cut(s)	407
BglII	AGATCT	2 cut(s)	682, 1213
BisI	GCNGC	7 cut(s)	249, 478, 516, 519, 557, 647, 1035
BlsI	GCNGC	7 cut(s)	250, 479, 517, 520, 558, 648, 1036
Bme1390I	CCNGG	1 cut(s)	798
BmeRI	GACNNNNNGTC	1 cut(s)	34
BmeT110I	CYCGRG	1 cut(s)	1008
BmgBI	CACGTC	1 cut(s)	601
BmgT120I	GGNCC	1 cut(s)	479
BmiI	GGNNCC	4 cut(s)	342, 795, 1050, 1084
BmrFI	CCNGG	1 cut(s)	798
BmsI	GCATC	8 cut(s)	107, 184, 460, 669, 831, 901, 1221, 1424
BpiI	GAAGAC	3 cut(s)	48, 603, 1649
BpmI	CTGGAG	1 cut(s)	405
Bpu14I	TTCGAA	2 cut(s)	299, 1000
BpuEI	CTTGAG	2 cut(s)	176, 1628
BpuMI	CCSGG	1 cut(s)	798
BsaJI	CCNNGG	3 cut(s)	12, 797, 1009
Bsc4I	CCNNNNNNNGG	3 cut(s)	350, 1394, 1754
Bse118I	RCCGGY	1 cut(s)	561
Bse1I	ACTGG	3 cut(s)	403, 870, 1408
Bse3DI	GCAATG	1 cut(s)	1546
BseDI	CCNNGG	3 cut(s)	12, 797, 1009
BseGI	GGATG	6 cut(s)	660, 775, 1384, 1582, 1699, 1733
BseLI	CCNNNNNNNGG	3 cut(s)	350, 1394, 1754
BseMI	GCAATG	1 cut(s)	1546
BseMII	CTCAG	4 cut(s)	125, 157, 773, 1566
BseNI	ACTGG	3 cut(s)	403, 870, 1408
BseSI	GKGCMC	1 cut(s)	466
BseXI	GCAGC	6 cut(s)	235, 502, 505, 568, 633, 1021
BsgI	GTGCAG	2 cut(s)	234, 575
Bsh1236I	CGCG	2 cut(s)	221, 1648
BshFI	GGCC	5 cut(s)	104, 480, 986, 1407, 1724
BsiHKCI	CYCGRG	1 cut(s)	1008
BsiSI	CCGG	3 cut(s)	562, 797, 1135
BslFI	GGGAC	1 cut(s)	1542
BslI	CCNNNNNNNGG	3 cut(s)	350, 1394, 1754
BsmAI	GTCTC	1 cut(s)	755
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	1 cut(s)	1542
BsmI	GAATGC	1 cut(s)	368
BsnI	GGCC	5 cut(s)	104, 480, 986, 1407, 1724
BsoBI	CYCGRG	1 cut(s)	1008
Bsp119I	TTCGAA	2 cut(s)	299, 1000
Bsp1286I	GDGCHC	1 cut(s)	466
Bsp1407I	TGTACA	2 cut(s)	393, 1672
Bsp143I	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
Bsp19I	CCATGG	1 cut(s)	12
BspACI	CCGC	8 cut(s)	197, 221, 317, 416, 477, 1053, 1080, 1379
BspANI	GGCC	5 cut(s)	104, 480, 986, 1407, 1724
BspCNI	CTCAG	4 cut(s)	126, 156, 772, 1565
BspFNI	CGCG	2 cut(s)	221, 1648
BspHI	TCATGA	1 cut(s)	718
BspLI	GGNNCC	4 cut(s)	342, 795, 1050, 1084
BspPI	GGATC	6 cut(s)	24, 82, 598, 941, 1389, 1432
BspQI	GCTCTTC	2 cut(s)	927, 1620
BspT104I	TTCGAA	2 cut(s)	299, 1000
BspTI	CTTAAG	1 cut(s)	407
BsrDI	GCAATG	1 cut(s)	1546
BsrFI	RCCGGY	1 cut(s)	561
BsrGI	TGTACA	2 cut(s)	393, 1672
BsrI	ACTGG	3 cut(s)	403, 870, 1408
BssAI	RCCGGY	1 cut(s)	561
BssECI	CCNNGG	3 cut(s)	12, 797, 1009
BssMI	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
BssSI	CACGAG	1 cut(s)	269
BssT1I	CCWWGG	1 cut(s)	12
Bst2BI	CACGAG	1 cut(s)	269
Bst4CI	ACNGT	7 cut(s)	350, 436, 944, 1021, 1338, 1519, 1710
Bst6I	CTCTTC	4 cut(s)	879, 927, 1074, 1620
BstAFI	CTTAAG	1 cut(s)	407
BstAUI	TGTACA	2 cut(s)	393, 1672
BstBI	TTCGAA	2 cut(s)	299, 1000
BstC8I	GCNNGC	5 cut(s)	253, 475, 563, 1365, 1503
BstDEI	CTNAG	5 cut(s)	134, 143, 759, 1093, 1552
BstDSI	CCRYGG	1 cut(s)	12
BstF5I	GGATG	6 cut(s)	660, 775, 1384, 1582, 1699, 1733
BstFNI	CGCG	2 cut(s)	221, 1648
BstH2I	RGCGCY	3 cut(s)	562, 1508, 1537
BstHHI	GCGC	4 cut(s)	561, 1507, 1536, 1650
BstKTI	GATC	9 cut(s)	19, 77, 606, 685, 949, 1216, 1384, 1427, 1478
BstMAI	GTCTC	1 cut(s)	755
BstMBI	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
BstMWI	GCNNNNNNNGC	3 cut(s)	470, 562, 1364
BstNSI	RCATGY	3 cut(s)	447, 477, 1261
BstSCI	CCNGG	1 cut(s)	796
BstSFI	CTRYAG	1 cut(s)	187
BstSLI	GKGCMC	1 cut(s)	466
BstUI	CGCG	2 cut(s)	221, 1648
BstV1I	GCAGC	6 cut(s)	235, 502, 505, 568, 633, 1021
BstV2I	GAAGAC	3 cut(s)	48, 603, 1649
BstX2I	RGATCY	3 cut(s)	682, 1213, 1424
BstYI	RGATCY	3 cut(s)	682, 1213, 1424
BsuRI	GGCC	5 cut(s)	104, 480, 986, 1407, 1724
BtgI	CCRYGG	1 cut(s)	12
BtrI	CACGTC	1 cut(s)	601
BtsCI	GGATG	6 cut(s)	660, 775, 1384, 1582, 1699, 1733
BtsI	GCAGTG	2 cut(s)	628, 655
BtsIMutI	CAGTG	6 cut(s)	151, 396, 628, 655, 1401, 1524
Cac8I	GCNNGC	5 cut(s)	253, 475, 563, 1365, 1503
CciI	TCATGA	1 cut(s)	718
CfoI	GCGC	4 cut(s)	561, 1507, 1536, 1650
Cfr10I	RCCGGY	1 cut(s)	561
Cfr13I	GGNCC	1 cut(s)	479
CseI	GACGC	2 cut(s)	42, 1654
Csp6I	GTAC	5 cut(s)	117, 394, 1022, 1399, 1673
CviAII	CATG	8 cut(s)	13, 444, 467, 474, 548, 719, 1028, 1258
CviQI	GTAC	5 cut(s)	117, 394, 1022, 1399, 1673
DdeI	CTNAG	5 cut(s)	134, 143, 759, 1093, 1552
DpnI	GATC	9 cut(s)	18, 76, 605, 684, 948, 1215, 1383, 1426, 1477
DpnII	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
DriI	GACNNNNNGTC	1 cut(s)	34
EaeI	YGGCCR	2 cut(s)	102, 984
Eam1104I	CTCTTC	4 cut(s)	879, 927, 1074, 1620
Eam1105I	GACNNNNNGTC	1 cut(s)	34
EarI	CTCTTC	4 cut(s)	879, 927, 1074, 1620
EciI	GGCGGA	1 cut(s)	1394
Eco130I	CCWWGG	1 cut(s)	12
Eco47III	AGCGCT	1 cut(s)	1506
Eco57I	CTGAAG	2 cut(s)	1374, 1644
Eco88I	CYCGRG	1 cut(s)	1008
EcoT14I	CCWWGG	1 cut(s)	12
EcoT22I	ATGCAT	2 cut(s)	475, 1211
ErhI	CCWWGG	1 cut(s)	12
Esp3I	CGTCTC	1 cut(s)	755
FaeI	CATG	8 cut(s)	16, 447, 470, 477, 551, 722, 1031, 1261
FalI	AAGNNNNNCTT	6 cut(s)	365, 397, 1347, 1379, 1634, 1666
FaqI	GGGAC	1 cut(s)	1542
FatI	CATG	8 cut(s)	12, 443, 466, 473, 547, 718, 1027, 1257
FauI	CCCGC	1 cut(s)	1060
FblI	GTMKAC	1 cut(s)	976
Fnu4HI	GCNGC	7 cut(s)	249, 478, 516, 519, 557, 647, 1035
FokI	GGATG	6 cut(s)	647, 782, 1371, 1589, 1706, 1720
Fsp4HI	GCNGC	7 cut(s)	249, 478, 516, 519, 557, 647, 1035
FspBI	CTAG	5 cut(s)	701, 1061, 1146, 1220, 1428
GlaI	GCGC	4 cut(s)	560, 1506, 1535, 1649
GluI	GCNGC	7 cut(s)	249, 478, 516, 519, 557, 647, 1035
GsuI	CTGGAG	1 cut(s)	405
HaeII	RGCGCY	3 cut(s)	562, 1508, 1537
HaeIII	GGCC	5 cut(s)	104, 480, 986, 1407, 1724
HapII	CCGG	3 cut(s)	562, 797, 1135
HgaI	GACGC	2 cut(s)	42, 1654
HhaI	GCGC	4 cut(s)	561, 1507, 1536, 1650
Hin1II	CATG	8 cut(s)	16, 447, 470, 477, 551, 722, 1031, 1261
Hin6I	GCGC	4 cut(s)	559, 1505, 1534, 1648
HinP1I	GCGC	4 cut(s)	559, 1505, 1534, 1648
HincII	GTYRAC	1 cut(s)	1143
HindII	GTYRAC	1 cut(s)	1143
HindIII	AAGCTT	1 cut(s)	1361
HpaII	CCGG	3 cut(s)	562, 797, 1135
HphI	GGTGA	1 cut(s)	1288
Hpy166II	GTNNAC	6 cut(s)	314, 396, 977, 1143, 1255, 1401
Hpy188I	TCNGA	8 cut(s)	135, 334, 682, 853, 892, 1074, 1555, 1749
Hpy8I	GTNNAC	6 cut(s)	314, 396, 977, 1143, 1255, 1401
HpyAV	CCTTC	5 cut(s)	277, 298, 302, 1672, 1744
HpyCH4III	ACNGT	7 cut(s)	350, 436, 944, 1021, 1338, 1519, 1710
HpyCH4IV	ACGT	2 cut(s)	600, 979
HpyF10VI	GCNNNNNNNGC	3 cut(s)	470, 562, 1364
HpyF3I	CTNAG	5 cut(s)	134, 143, 759, 1093, 1552
HpySE526I	ACGT	2 cut(s)	600, 979
Hsp92II	CATG	8 cut(s)	16, 447, 470, 477, 551, 722, 1031, 1261
HspAI	GCGC	4 cut(s)	559, 1505, 1534, 1648
KroI	GCCGGC	1 cut(s)	561
KroNI	GCCGGC	1 cut(s)	563
Kzo9I	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
LguI	GCTCTTC	2 cut(s)	927, 1620
LmnI	GCTCC	3 cut(s)	793, 1082, 1657
Lsp1109I	GCAGC	6 cut(s)	235, 502, 505, 568, 633, 1021
LweI	GCATC	8 cut(s)	107, 184, 460, 669, 831, 901, 1221, 1424
MaeI	CTAG	5 cut(s)	701, 1061, 1146, 1220, 1428
MaeII	ACGT	2 cut(s)	600, 979
MaeIII	GTNAC	2 cut(s)	83, 868
MalI	GATC	9 cut(s)	18, 76, 605, 684, 948, 1215, 1383, 1426, 1477
MboI	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
MflI	RGATCY	3 cut(s)	682, 1213, 1424
MhlI	GDGCHC	1 cut(s)	466
MlsI	TGGCCA	1 cut(s)	986
MluNI	TGGCCA	1 cut(s)	986
MlyI	GAGTC	6 cut(s)	135, 139, 649, 842, 896, 1479
MmeI	TCCRAC	1 cut(s)	1412
Mox20I	TGGCCA	1 cut(s)	986
Mph1103I	ATGCAT	2 cut(s)	475, 1211
MroNI	GCCGGC	1 cut(s)	561
MroXI	GAANNNNTTC	3 cut(s)	339, 543, 1240
MscI	TGGCCA	1 cut(s)	986
MseI	TTAA	7 cut(s)	408, 489, 816, 960, 1512, 1662, 1761
MslI	CAYNNNNRTG	1 cut(s)	24
Msp20I	TGGCCA	1 cut(s)	986
MspA1I	CMGCKG	2 cut(s)	646, 1080
MspCI	CTTAAG	1 cut(s)	407
MspI	CCGG	3 cut(s)	562, 797, 1135
MspR9I	CCNGG	1 cut(s)	798
Mva1269I	GAATGC	1 cut(s)	368
MvnI	CGCG	2 cut(s)	221, 1648
MwoI	GCNNNNNNNGC	3 cut(s)	470, 562, 1364
NaeI	GCCGGC	1 cut(s)	563
NciI	CCSGG	1 cut(s)	798
NcoI	CCATGG	1 cut(s)	12
NdeII	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
NgoMIV	GCCGGC	1 cut(s)	561
NlaIII	CATG	8 cut(s)	16, 447, 470, 477, 551, 722, 1031, 1261
NlaIV	GGNNCC	4 cut(s)	342, 795, 1050, 1084
NsiI	ATGCAT	2 cut(s)	475, 1211
NspI	RCATGY	3 cut(s)	447, 477, 1261
NspV	TTCGAA	2 cut(s)	299, 1000
PaeI	GCATGC	1 cut(s)	477
PagI	TCATGA	1 cut(s)	718
PciI	ACATGT	2 cut(s)	443, 1257
PciSI	GCTCTTC	2 cut(s)	927, 1620
PcsI	WCGNNNNNNNCGW	1 cut(s)	1006
PctI	GAATGC	1 cut(s)	368
PdiI	GCCGGC	1 cut(s)	563
PdmI	GAANNNNTTC	3 cut(s)	339, 543, 1240
PfeI	GAWTC	7 cut(s)	173, 296, 610, 755, 773, 831, 893
PkrI	GCNGC	7 cut(s)	250, 479, 517, 520, 558, 648, 1036
PleI	GAGTC	6 cut(s)	135, 138, 648, 842, 895, 1479
PpsI	GAGTC	6 cut(s)	135, 138, 648, 842, 895, 1479
PscI	ACATGT	2 cut(s)	443, 1257
PshBI	ATTAAT	1 cut(s)	489
PsiI	TTATAA	1 cut(s)	1161
PspN4I	GGNNCC	4 cut(s)	342, 795, 1050, 1084
PspPI	GGNCC	1 cut(s)	479
PsrI	GAACNNNNNNTAC	2 cut(s)	377, 409
PsuI	RGATCY	3 cut(s)	682, 1213, 1424
PvuII	CAGCTG	1 cut(s)	646
RsaI	GTAC	5 cut(s)	118, 395, 1023, 1400, 1674
RsaNI	GTAC	5 cut(s)	117, 394, 1022, 1399, 1673
RseI	CAYNNNNRTG	1 cut(s)	24
SapI	GCTCTTC	2 cut(s)	927, 1620
SaqAI	TTAA	7 cut(s)	408, 489, 816, 960, 1512, 1662, 1761
SatI	GCNGC	7 cut(s)	249, 478, 516, 519, 557, 647, 1035
Sau3AI	GATC	9 cut(s)	16, 74, 603, 682, 946, 1213, 1381, 1424, 1475
Sau96I	GGNCC	1 cut(s)	479
SchI	GAGTC	6 cut(s)	135, 139, 649, 842, 896, 1479
ScrFI	CCNGG	1 cut(s)	798
SduI	GDGCHC	1 cut(s)	466
SfaNI	GCATC	8 cut(s)	107, 184, 460, 669, 831, 901, 1221, 1424
SfcI	CTRYAG	1 cut(s)	187
SfuI	TTCGAA	2 cut(s)	299, 1000
SmiMI	CAYNNNNRTG	1 cut(s)	24
SmlI	CTYRAG	3 cut(s)	155, 407, 1607
SmoI	CTYRAG	3 cut(s)	155, 407, 1607
SphI	GCATGC	1 cut(s)	477
SsiI	CCGC	8 cut(s)	197, 221, 317, 416, 477, 1053, 1080, 1379
SspMI	CTAG	5 cut(s)	701, 1061, 1146, 1220, 1428
StyD4I	CCNGG	1 cut(s)	796
StyI	CCWWGG	1 cut(s)	12
TaaI	ACNGT	7 cut(s)	350, 436, 944, 1021, 1338, 1519, 1710
TaiI	ACGT	2 cut(s)	603, 982
TaqI	TCGA	7 cut(s)	68, 299, 579, 753, 1000, 1244, 1449
TaqII	GACCGA	1 cut(s)	1215
TatI	WGTACW	4 cut(s)	116, 393, 1021, 1672
TauI	GCSGC	1 cut(s)	480
TfiI	GAWTC	7 cut(s)	173, 296, 610, 755, 773, 831, 893
Tru1I	TTAA	7 cut(s)	408, 489, 816, 960, 1512, 1662, 1761
Tru9I	TTAA	7 cut(s)	408, 489, 816, 960, 1512, 1662, 1761
TscAI	CASTG	6 cut(s)	151, 403, 635, 662, 1408, 1524
TseI	GCWGC	6 cut(s)	248, 515, 518, 556, 646, 1034
TspDTI	ATGAA	8 cut(s)	378, 536, 548, 735, 786, 891, 1016, 1473
TspGWI	ACGGA	1 cut(s)	737
TspRI	CASTG	6 cut(s)	151, 403, 635, 662, 1408, 1524
Vha464I	CTTAAG	1 cut(s)	407
VspI	ATTAAT	1 cut(s)	489
XapI	RAATTY	1 cut(s)	1240
XbaI	TCTAGA	2 cut(s)	700, 1219
XceI	RCATGY	3 cut(s)	447, 477, 1261
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1366
XmiI	GTMKAC	1 cut(s)	976
XmnI	GAANNNNTTC	3 cut(s)	339, 543, 1240
XspI	CTAG	5 cut(s)	701, 1061, 1146, 1220, 1428
Zsp2I	ATGCAT	2 cut(s)	475, 1211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.