Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Reverse (-)

69811690 .. 69817005

Gene Structure 5316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52157

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGAGAATGTGAATGATCTGTCGGCTTCGTTGAGCTTTGCCTCCTCATATCTGTCAAATGGGTCTAGTGGAAGCCATGGACTTGCCTCGGCCAATGCTCAACCCGGCTTGACTACTGAGCATTTGAGTCTAAGCAAACTGAGTGACAATCTAGAGAGGTTGTTACTTGATTCTCAGTACGACTATAGTGATGCAGAGATTGTTGTTGAGGGCATCCCTGTTAGTGTTAATCGGTGTATATTAGCTGCCCGTAGTCAGTTTTTTCATGAGCTTTTTCAGAAGGGCAATGATAATTCGATGAAAGAAGGTAAACCGCAGTATCTGATGTCTGAATTGGTTCCTCACGGTGGGGTTGGCTACGAGGCCTTCAATGTTTTCTTGAACTATTTGTACACCGGGAAGCTTAAGCCATCACCTCCAGAAGTGTCGACATGTGTTGAGGATGTTTGTGCTCATGATGCATGTGGCCCTGCTATTAACTATGCTGTGGAATTGATGTATGCTTCTTCCACGTTTCAAATGAAGGAGCTTGTTCAAGTTGTTCAGCGCCGTCTTTGGAACTTTGTTGACAAAGCTCTTGTTGAAGATGTGATCCCAATTCTTGTAGCTGCTTTCCACTGCCAACTGAGTCAGCTGCTCTCACACTGTGTTCAGAGGGTCTCAAGGTCAGATCTCGACAATGTGGCTCTAGAGAAAGAGCTTCCTCATGAAGTTTTAGATGATGTAAAATCACTCCGTCTCGAATCTCAGGAAAAGGATGAATCAATTATGCTGGAGAAGGAGCCGAGGGAGGATAAGAGGCTTAAAAGCATCAGGAGAATCCTCAGGGCATTAGACTCTGATGATGTTGAACTTGTTACCCTTCTTCTGAATGAGTCTGATTCTATCACATTAGATGATGCTCATGCTCTCCACTATGCTGCTGCATACTGTGATCCTAAGATTGTTAAGGAGATTCTTGGTCTAGGGTTGGCAGATGTCAACCTTCGCAATGCACGAGAACATACTGTGCTTCATGTGGCAGCAAGGCGTAAGGAGCCATCAGTTATAGTTCATCTTCTGAACAAGGGAGCCTCTGCCTTAGAAACTACATCAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGAATCTAATAAAGACCGAATGTGTATAGATCTTCTAGAGAGAGAGATGCGAAGAAACTCGATATGTGGGAACTTGTCAAACACATCACAGATGGTAGCTGATGATTTTCACGTGAGCCTGAGCTATCTAGAAAATAGAGTGGCATTTGCACATTTGTTGTTTCCTACCGAAGCCAAGCTTGCTATGGAAATGGCAGATGCTGATTTAACATCAGGGTACACTGGCCTTTCAGGATCAAGAACCTCAAATGGAAACTTACGTGAGGTTGATTTGAATGAAACACCCTCTGGAAGGGCCAAAAGACTCCAAGAAAAATTGCAAACCCTTATTAAAACAGTGGAAAAGGGTCGCCGCTTCTTCCCCCATTGCTCAGCAGTTCTTGATAAGTTCTTGGATGATCTCGGTATGGGTGATTACTTTCTCGAGAAAGGCACTCCTGAAGAGCAGAAAAACAAGAAGAGGCGTTTCTTGGAACTCAAGGCCGATGTACAGAAGGCATTTTGCAAGGACATGGCTGAAAAGGCTGAAAATAACCAGTCTGTTTTGACATCCTCATCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

578

Amino Acids

64.52

Weight (kDa)

5.46

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	58 - 179	1e-11	BTB/POZ domain
DUF3420	PF11900	224 - 272	2.2e-09	Domain of unknown function (DUF3420)
Ank_2	PF12796	304 - 374	6.1e-07	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	375 - 577	1.3e-75	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1149
AccI	GTMKAC	1 cut(s)	428
AciI	CCGC	2 cut(s)	314, 1525
AclWI	GGATC	3 cut(s)	586, 929, 1414
AcoI	YGGCCR	1 cut(s)	90
AcuI	CTGAAG	1 cut(s)	1632
AcvI	CACGTG	1 cut(s)	1285
AdeI	CACNNNGTG	1 cut(s)	647
AfaI	GTAC	4 cut(s)	179, 392, 1391, 1662
AfiI	CCNNNNNNNGG	2 cut(s)	347, 1464
AflII	CTTAAG	1 cut(s)	404
AflIII	ACRYGT	1 cut(s)	431
AgsI	TTSAA	7 cut(s)	370, 382, 518, 536, 584, 851, 1447
Alw21I	GWGCWC	1 cut(s)	454
Alw26I	GTCTC	2 cut(s)	664, 743
AlwI	GGATC	3 cut(s)	586, 929, 1414
AlwNI	CAGNNNCTG	2 cut(s)	322, 1373
Ama87I	CYCGRG	1 cut(s)	1595
AoxI	GGCC	6 cut(s)	90, 363, 466, 1396, 1467, 1653
ApeKI	GCWGC	6 cut(s)	245, 608, 634, 920, 923, 1022
Asp700I	GAANNNNTTC	1 cut(s)	336
AspLEI	GCGC	1 cut(s)	549
AspS9I	GGNCC	2 cut(s)	467, 1467
AsuC2I	CCSGG	2 cut(s)	105, 397
AsuHPI	GGTGA	2 cut(s)	405, 1595
AvaI	CYCGRG	1 cut(s)	1595
AxyI	CCTNAGG	1 cut(s)	824
BaeI	ACNNNNGTAYC	2 cut(s)	302, 335
BauI	CACGAG	1 cut(s)	996
BbrPI	CACGTG	1 cut(s)	1285
Bbv12I	GWGCWC	1 cut(s)	454
BbvI	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BccI	CCATC	4 cut(s)	418, 1048, 1091, 1258
BceAI	ACGGC	1 cut(s)	534
BcnI	CCSGG	2 cut(s)	105, 397
BcoDI	GTCTC	2 cut(s)	664, 743
BfaI	CTAG	7 cut(s)	66, 152, 689, 965, 1134, 1208, 1301
BfmI	CTRYAG	1 cut(s)	184
BfoI	RGCGCY	1 cut(s)	550
BfrI	CTTAAG	1 cut(s)	404
BglII	AGATCT	2 cut(s)	670, 1201
BisI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1525
BlpI	GCTNAGC	1 cut(s)	1543
BlsI	GCNGC	7 cut(s)	247, 610, 636, 922, 925, 1024, 1526
Bme1390I	CCNGG	2 cut(s)	105, 397
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	2 cut(s)	467, 1467
BmiI	GGNNCC	4 cut(s)	339, 783, 1038, 1072
BmrFI	CCNGG	2 cut(s)	105, 397
BmsI	GCATC	7 cut(s)	181, 222, 448, 819, 889, 1209, 1360
BpmI	CTGGAG	2 cut(s)	402, 794
Bpu10I	CCTNAGC	1 cut(s)	1292
Bpu1102I	GCTNAGC	1 cut(s)	1543
BpuEI	CTTGAG	2 cut(s)	646, 1634
BpuMI	CCSGG	2 cut(s)	105, 397
BsaAI	YACGTR	2 cut(s)	1285, 1433
BsaI	GGTCTC	1 cut(s)	664
BsaJI	CCNNGG	3 cut(s)	76, 87, 785
Bsc4I	CCNNNNNNNGG	2 cut(s)	347, 1464
Bse1I	ACTGG	2 cut(s)	1399, 1708
Bse21I	CCTNAGG	1 cut(s)	824
Bse3DI	GCAATG	3 cut(s)	292, 997, 1537
BseDI	CCNNGG	3 cut(s)	76, 87, 785
BseGI	GGATG	5 cut(s)	213, 448, 763, 1573, 1721
BseLI	CCNNNNNNNGG	2 cut(s)	347, 1464
BseMI	GCAATG	3 cut(s)	292, 997, 1537
BseMII	CTCAG	8 cut(s)	108, 131, 188, 617, 761, 838, 1283, 1557
BseNI	ACTGG	2 cut(s)	1399, 1708
BseRI	GAGGAG	1 cut(s)	34
BseXI	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BshFI	GGCC	6 cut(s)	92, 365, 468, 1398, 1469, 1655
BsiHKAI	GWGCWC	1 cut(s)	454
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	3 cut(s)	105, 396, 1123
BslI	CCNNNNNNNGG	2 cut(s)	347, 1464
BsmAI	GTCTC	2 cut(s)	664, 743
BsmBI	CGTCTC	1 cut(s)	743
BsnI	GGCC	6 cut(s)	92, 365, 468, 1398, 1469, 1655
Bso31I	GGTCTC	1 cut(s)	664
BsoBI	CYCGRG	1 cut(s)	1595
Bsp1286I	GDGCHC	1 cut(s)	454
Bsp1407I	TGTACA	2 cut(s)	390, 1660
Bsp143I	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
Bsp1720I	GCTNAGC	1 cut(s)	1543
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	2 cut(s)	314, 1525
BspANI	GGCC	6 cut(s)	92, 365, 468, 1398, 1469, 1655
BspCNI	CTCAG	8 cut(s)	109, 132, 187, 618, 760, 837, 1284, 1556
BspHI	TCATGA	3 cut(s)	265, 454, 706
BspLI	GGNNCC	4 cut(s)	339, 783, 1038, 1072
BspPI	GGATC	3 cut(s)	586, 929, 1414
BspQI	GCTCTTC	1 cut(s)	1608
BspTI	CTTAAG	1 cut(s)	404
BspTNI	GGTCTC	1 cut(s)	664
BsrDI	GCAATG	3 cut(s)	292, 997, 1537
BsrGI	TGTACA	2 cut(s)	390, 1660
BsrI	ACTGG	2 cut(s)	1399, 1708
BssECI	CCNNGG	3 cut(s)	76, 87, 785
BssMI	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
BssSI	CACGAG	1 cut(s)	996
BssT1I	CCWWGG	1 cut(s)	76
Bst2BI	CACGAG	1 cut(s)	996
Bst4CI	ACNGT	5 cut(s)	347, 647, 932, 1009, 1510
Bst6I	CTCTTC	2 cut(s)	1608, 1625
BstAFI	CTTAAG	1 cut(s)	404
BstAUI	TGTACA	2 cut(s)	390, 1660
BstBAI	YACGTR	2 cut(s)	1285, 1433
BstC8I	GCNNGC	1 cut(s)	1353
BstDSI	CCRYGG	1 cut(s)	76
BstENI	CCTNNNNNAGG	1 cut(s)	1462
BstF5I	GGATG	5 cut(s)	213, 448, 763, 1573, 1721
BstH2I	RGCGCY	1 cut(s)	550
BstHHI	GCGC	1 cut(s)	549
BstKTI	GATC	7 cut(s)	19, 594, 673, 937, 1204, 1409, 1573
BstMAI	GTCTC	2 cut(s)	664, 743
BstMBI	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
BstMWI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1694
BstNSI	RCATGY	2 cut(s)	435, 465
BstSCI	CCNGG	2 cut(s)	103, 395
BstSFI	CTRYAG	1 cut(s)	184
BstV1I	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BstX2I	RGATCY	2 cut(s)	670, 1201
BstYI	RGATCY	2 cut(s)	670, 1201
Bsu36I	CCTNAGG	1 cut(s)	824
BsuRI	GGCC	6 cut(s)	92, 365, 468, 1398, 1469, 1655
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	5 cut(s)	213, 448, 763, 1573, 1721
BtsI	GCAGTG	1 cut(s)	616
BtsIMutI	CAGTG	4 cut(s)	616, 643, 1392, 1515
Cac8I	GCNNGC	1 cut(s)	1353
CaiI	CAGNNNCTG	2 cut(s)	322, 1373
CciI	TCATGA	3 cut(s)	265, 454, 706
CfoI	GCGC	1 cut(s)	549
Cfr13I	GGNCC	2 cut(s)	467, 1467
Csp6I	GTAC	4 cut(s)	178, 391, 1390, 1661
CviAII	CATG	9 cut(s)	77, 266, 432, 455, 462, 707, 905, 1016, 1684
CviQI	GTAC	4 cut(s)	178, 391, 1390, 1661
DpnI	GATC	7 cut(s)	18, 593, 672, 936, 1203, 1408, 1572
DpnII	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
DraIII	CACNNNGTG	1 cut(s)	647
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	2 cut(s)	1608, 1625
EarI	CTCTTC	2 cut(s)	1608, 1625
Eco130I	CCWWGG	1 cut(s)	76
Eco147I	AGGCCT	1 cut(s)	365
Eco31I	GGTCTC	1 cut(s)	664
Eco57I	CTGAAG	1 cut(s)	1632
Eco72I	CACGTG	1 cut(s)	1285
Eco81I	CCTNAGG	1 cut(s)	824
Eco88I	CYCGRG	1 cut(s)	1595
EcoNI	CCTNNNNNAGG	1 cut(s)	1462
EcoT14I	CCWWGG	1 cut(s)	76
EcoT22I	ATGCAT	1 cut(s)	463
ErhI	CCWWGG	1 cut(s)	76
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	9 cut(s)	80, 269, 435, 458, 465, 710, 908, 1019, 1687
FalI	AAGNNNNNCTT	2 cut(s)	1335, 1367
FatI	CATG	9 cut(s)	76, 265, 431, 454, 461, 706, 904, 1015, 1683
FblI	GTMKAC	1 cut(s)	428
Fnu4HI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1525
FokI	GGATG	5 cut(s)	200, 455, 770, 1580, 1708
Fsp4HI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1525
FspBI	CTAG	7 cut(s)	66, 152, 689, 965, 1134, 1208, 1301
GlaI	GCGC	1 cut(s)	548
GluI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1525
GsuI	CTGGAG	2 cut(s)	402, 794
HaeII	RGCGCY	1 cut(s)	550
HaeIII	GGCC	6 cut(s)	92, 365, 468, 1398, 1469, 1655
HapII	CCGG	3 cut(s)	105, 396, 1123
HhaI	GCGC	1 cut(s)	549
Hin1II	CATG	9 cut(s)	80, 269, 435, 458, 465, 710, 908, 1019, 1687
Hin6I	GCGC	1 cut(s)	547
HinP1I	GCGC	1 cut(s)	547
HincII	GTYRAC	4 cut(s)	429, 568, 982, 1131
HindII	GTYRAC	4 cut(s)	429, 568, 982, 1131
HindIII	AAGCTT	2 cut(s)	401, 1349
HpaII	CCGG	3 cut(s)	105, 396, 1123
HphI	GGTGA	2 cut(s)	405, 1595
Hpy166II	GTNNAC	7 cut(s)	311, 393, 429, 568, 982, 1131, 1392
Hpy8I	GTNNAC	7 cut(s)	311, 393, 429, 568, 982, 1131, 1392
HpyAV	CCTTC	9 cut(s)	274, 299, 376, 517, 772, 872, 995, 1458, 1660
HpyCH4III	ACNGT	5 cut(s)	347, 647, 932, 1009, 1510
HpyCH4IV	ACGT	3 cut(s)	512, 1284, 1432
HpyCH4V	TGCA	8 cut(s)	194, 461, 926, 995, 1115, 1322, 1492, 1677
HpyF10VI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1694
HpySE526I	ACGT	3 cut(s)	512, 1284, 1432
Hsp92II	CATG	9 cut(s)	80, 269, 435, 458, 465, 710, 908, 1019, 1687
HspAI	GCGC	1 cut(s)	547
Kzo9I	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
LguI	GCTCTTC	1 cut(s)	1608
LmnI	GCTCC	4 cut(s)	526, 781, 1036, 1070
Lsp1109I	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
LweI	GCATC	7 cut(s)	181, 222, 448, 819, 889, 1209, 1360
MaeI	CTAG	7 cut(s)	66, 152, 689, 965, 1134, 1208, 1301
MaeII	ACGT	3 cut(s)	512, 1284, 1432
MaeIII	GTNAC	3 cut(s)	143, 162, 856
MalI	GATC	7 cut(s)	18, 593, 672, 936, 1203, 1408, 1572
MboI	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
MboII	GAAGA	9 cut(s)	498, 596, 857, 1049, 1196, 1236, 1522, 1625, 1642
MflI	RGATCY	2 cut(s)	670, 1201
MhlI	GDGCHC	1 cut(s)	454
MluCI	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1487, 1732
MlyI	GAGTC	5 cut(s)	136, 637, 830, 884, 1470
Mph1103I	ATGCAT	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	336
MseI	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1503
MspA1I	CMGCKG	1 cut(s)	634
MspCI	CTTAAG	1 cut(s)	404
MspI	CCGG	3 cut(s)	105, 396, 1123
MspR9I	CCNGG	2 cut(s)	105, 397
MwoI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1694
NciI	CCSGG	2 cut(s)	105, 397
NcoI	CCATGG	1 cut(s)	76
NdeII	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
NlaIII	CATG	9 cut(s)	80, 269, 435, 458, 465, 710, 908, 1019, 1687
NlaIV	GGNNCC	4 cut(s)	339, 783, 1038, 1072
NmeAIII	GCCGAG	2 cut(s)	68, 810
NmuCI	GTSAC	1 cut(s)	143
NsiI	ATGCAT	1 cut(s)	463
NspI	RCATGY	2 cut(s)	435, 465
PaeR7I	CTCGAG	1 cut(s)	1595
PagI	TCATGA	3 cut(s)	265, 454, 706
PceI	AGGCCT	1 cut(s)	365
PciI	ACATGT	1 cut(s)	431
PciSI	GCTCTTC	1 cut(s)	1608
PcsI	WCGNNNNNNNCGW	1 cut(s)	994
PdmI	GAANNNNTTC	1 cut(s)	336
PfeI	GAWTC	7 cut(s)	170, 743, 761, 819, 881, 955, 1175
PkrI	GCNGC	7 cut(s)	247, 610, 636, 922, 925, 1024, 1526
PleI	GAGTC	5 cut(s)	135, 636, 830, 883, 1470
PmaCI	CACGTG	1 cut(s)	1285
PmlI	CACGTG	1 cut(s)	1285
PpsI	GAGTC	5 cut(s)	135, 636, 830, 883, 1470
Ppu21I	YACGTR	2 cut(s)	1285, 1433
PscI	ACATGT	1 cut(s)	431
PsiI	TTATAA	1 cut(s)	1149
PspCI	CACGTG	1 cut(s)	1285
PspN4I	GGNNCC	4 cut(s)	339, 783, 1038, 1072
PspPI	GGNCC	2 cut(s)	467, 1467
PsrI	GAACNNNNNNTAC	2 cut(s)	374, 406
PstNI	CAGNNNCTG	2 cut(s)	322, 1373
PsuI	RGATCY	2 cut(s)	670, 1201
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	4 cut(s)	179, 392, 1391, 1662
RsaNI	GTAC	4 cut(s)	178, 391, 1390, 1661
SalI	GTCGAC	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	1608
SaqAI	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1503
SatI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1525
Sau3AI	GATC	7 cut(s)	16, 591, 670, 934, 1201, 1406, 1570
Sau96I	GGNCC	2 cut(s)	467, 1467
SchI	GAGTC	5 cut(s)	136, 637, 830, 884, 1470
ScrFI	CCNGG	2 cut(s)	105, 397
SduI	GDGCHC	1 cut(s)	454
SfaNI	GCATC	7 cut(s)	181, 222, 448, 819, 889, 1209, 1360
SfcI	CTRYAG	1 cut(s)	184
Sfr274I	CTCGAG	1 cut(s)	1595
SlaI	CTCGAG	1 cut(s)	1595
SmlI	CTYRAG	4 cut(s)	404, 661, 1595, 1649
SmoI	CTYRAG	4 cut(s)	404, 661, 1595, 1649
Sse9I	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1487, 1732
SseBI	AGGCCT	1 cut(s)	365
SsiI	CCGC	2 cut(s)	314, 1525
SspMI	CTAG	7 cut(s)	66, 152, 689, 965, 1134, 1208, 1301
StuI	AGGCCT	1 cut(s)	365
StyD4I	CCNGG	2 cut(s)	103, 395
StyI	CCWWGG	1 cut(s)	76
TaaI	ACNGT	5 cut(s)	347, 647, 932, 1009, 1510
TaiI	ACGT	3 cut(s)	515, 1287, 1435
TaqI	TCGA	6 cut(s)	296, 428, 675, 741, 1232, 1596
TaqII	GACCGA	1 cut(s)	1203
TasI	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1487, 1732
TatI	WGTACW	2 cut(s)	390, 1660
TauI	GCSGC	1 cut(s)	1527
TfiI	GAWTC	7 cut(s)	170, 743, 761, 819, 881, 955, 1175
Tru1I	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1503
Tru9I	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1503
TscAI	CASTG	4 cut(s)	623, 650, 1399, 1515
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	6 cut(s)	245, 608, 634, 920, 923, 1022
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	8 cut(s)	254, 314, 536, 723, 774, 1004, 1043, 1464
TspGWI	ACGGA	1 cut(s)	725
TspRI	CASTG	4 cut(s)	623, 650, 1399, 1515
Vha464I	CTTAAG	1 cut(s)	404
XagI	CCTNNNNNAGG	1 cut(s)	1462
XbaI	TCTAGA	4 cut(s)	151, 688, 1207, 1300
XceI	RCATGY	2 cut(s)	435, 465
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XhoI	CTCGAG	1 cut(s)	1595
XmiI	GTMKAC	1 cut(s)	428
XmnI	GAANNNNTTC	1 cut(s)	336
XspI	CTAG	7 cut(s)	66, 152, 689, 965, 1134, 1208, 1301
Zsp2I	ATGCAT	1 cut(s)	463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.