Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Forward (+)

4934901 .. 4938302

Gene Structure 3402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g06690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGATAATGTCAATGAACTGTCATCATCCTTGAGCTTTGCCTCCTCCTCCTATCTGTCAAATGGGTCTAGTAGTAACCATGCATCTGCCTCAGCCAGTTCCCCAACCGCGCCGAGTGTTGAACATTACTTGAGTCTAAGCAAACTGAGTGATAATCTTGAGAGGCTGTTACTTGATCCTGAGTTTGACTATAGTGATGCTGAGATTGTTGTTGAGGGTAACACCGTGGGTGTCAATCGGTGTATATTGGCTTCCCGTAGTCAGTTTTTTCAGGAGCTTTTTAGGAAGGGGAGTGATGATTCGAACAAGGAAGGTAAACCGAGGTATCTCATGTCTGAATTGGTTCCAAACGGCGGGGTTGGCTATGAAGCCTTCAAGGTTTTCTTGAACTATTTGTACACTGGGAAGCTTAATCCATCCCCTCGAGAAGTGTCCACGTGCGTTGATAATGGTTGTCCGCATGATGCGTGCGGCCCTGCTATTAATTATGCTGTGGAATTGATGTATGCTTCTTCCACTTTCCAGATGAAGGAACTTGTTCAGCTTGTTCAGCGCCGTCTTTCAAACTTTGTGGAGAAAGCTCTTATTGAAGACGTAATTCCAATTCTTATAGCTGCCTTCCACTGCCAACTGAGCCAGCTGCTCTCACACTGCATCCAGAGGATAGTAAGGTCCAAGCTTGACAACATGGCTATAGAGAAAGAGTTTCCGCATGAAGTTTCTAATGATATCAAATCGCTCCGTCTCAAATCTCACGAAAATGATGAATCAAGTATGATGGAAATTGAGTCGATAGAGGATAAGAGAATCAGGAGAATCCACAAGGCATTAGATTCTGATGACGTTGAACTGGTTGGACTTCTTCTCAAGGAATCTGATATTACGTTAGATGATGCTTATGCTCTCCACTATGCTGCTGCATACTGTGATCCTAAGGTTGTTAAGGAGGTTCTCGGTCTAGGCGAGGCTAACCTCAATCTTCGCAATTCCCGAGGGCATACTGTACTTCATGTGGCAGCCAGACGTAAGCTGCCAGCAGTGCTAGTTCCTCTTCTGGACAGGGGAGCCTCTGCCTTGGAAACTAATTCAGATGGTCAAACTCCTGTTGCAATTTGCCGGAGATTGACCAGACCAAAGGATTTTTTGGAGAACACAAAGCAGGGACAGGAATCTAACAAAGACCGATTATGCATCGATCTTCTAGAGAGAGAGATGCAGAGAAACTCAACCTCTGGGAACATGTTGATCATATCAGAGGTGATACCTGATGATTTGCACGTGAGGCTGGACTATCTAGAAAATAGAGTGGCATTTGCGCGGTTGTTGTTTCCTGCTGAGGCCAAGCTTGCTATGGAAATGGCTGATGCTCATTCAACATCAATGTACACTGGCCTTGCGGCATCAAGAGGATCAAGTGGGAACTTACGAGAGGTTGATTTGAATGAAACACCCTCTGGACGAACCAAAAGACTACAAATAAGAATGCAAGCCCTTATTAAAACTGTAAAAATGGGGCGGCGTTTCTTCCCCAACTGCTCGGAAGTCCTGGATAAGTTTTTGGATGATGAGATGGACATGGCTGATTTCATCCTCGACAAGGGAACTCCGGAAGAGCAGAGAATCAAGAGGATGCGGTTCTTGGAACTGAAGGACGATGTACAGAAGGCATTTTGCAAGGACATGGCTGAAAATAACCGGTCAGTTTTATCAGCATCTTCGTCGTCGTCGTCTTCTCCGAAGGACAGGGTAAATCACAAGGTAAGGAGAAGGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

592

Amino Acids

66.29

Weight (kDa)

5.95

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	110, 1318
AccIII	TCCGGA	1 cut(s)	1606
AciI	CCGC	9 cut(s)	108, 354, 458, 471, 710, 1318, 1397, 1516, 1633
AclWI	GGATC	3 cut(s)	170, 923, 1417
AcuI	CTGAAG	1 cut(s)	1667
AcvI	CACGTG	2 cut(s)	438, 1279
AfaI	GTAC	4 cut(s)	398, 1005, 1385, 1659
AfiI	CCNNNNNNNGG	3 cut(s)	353, 529, 1597
AflIII	ACRYGT	1 cut(s)	1239
AgeI	ACCGGT	1 cut(s)	1695
AgsI	TTSAA	8 cut(s)	122, 376, 388, 564, 590, 848, 1374, 1441
AjnI	CCWGG	1 cut(s)	1545
Alw26I	GTCTC	1 cut(s)	749
AlwI	GGATC	3 cut(s)	170, 923, 1417
Ama87I	CYCGRG	2 cut(s)	423, 990
Aor13HI	TCCGGA	1 cut(s)	1606
AoxI	GGCC	3 cut(s)	472, 1338, 1390
ApeKI	GCWGC	6 cut(s)	614, 640, 914, 917, 1016, 1030
AseI	ATTAAT	1 cut(s)	483
AsiGI	ACCGGT	1 cut(s)	1695
Asp700I	GAANNNNTTC	2 cut(s)	342, 537
AspLEI	GCGC	3 cut(s)	112, 555, 1318
AspS9I	GGNCC	2 cut(s)	473, 672
AsuHPI	GGTGA	1 cut(s)	1270
AsuII	TTCGAA	1 cut(s)	302
AvaI	CYCGRG	2 cut(s)	423, 990
AvaII	GGWCC	1 cut(s)	672
AxyI	CCTNAGG	1 cut(s)	933
BaeI	ACNNNNGTAYC	2 cut(s)	308, 341
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbrPI	CACGTG	2 cut(s)	438, 1279
BbsI	GAAGAC	2 cut(s)	597, 1722
BbvCI	CCTCAGC	2 cut(s)	91, 1335
BbvI	GCAGC	6 cut(s)	601, 627, 901, 904, 1017, 1028
BccI	CCATC	4 cut(s)	424, 772, 1085, 1564
BceAI	ACGGC	2 cut(s)	367, 540
BcgI	CGANNNNNNTGC	2 cut(s)	1701, 1735
BciT130I	CCWGG	1 cut(s)	1547
BclI	TGATCA	1 cut(s)	1245
BcoDI	GTCTC	1 cut(s)	749
BfaI	CTAG	5 cut(s)	69, 959, 1043, 1202, 1295
BfmI	CTRYAG	2 cut(s)	190, 693
BfoI	RGCGCY	1 cut(s)	556
BisI	GCNGC	9 cut(s)	472, 615, 641, 915, 918, 1017, 1031, 1398, 1517
BlsI	GCNGC	9 cut(s)	473, 616, 642, 916, 919, 1018, 1032, 1399, 1518
Bme1390I	CCNGG	1 cut(s)	1547
Bme18I	GGWCC	1 cut(s)	672
BmeT110I	CYCGRG	2 cut(s)	423, 990
BmgT120I	GGNCC	2 cut(s)	473, 672
BmiI	GGNNCC	2 cut(s)	345, 1066
BmrFI	CCNGG	1 cut(s)	1547
BmrI	ACTGGG	1 cut(s)	411
BmuI	ACTGGG	1 cut(s)	411
BpiI	GAAGAC	2 cut(s)	597, 1722
Bpu10I	CCTNAGC	2 cut(s)	91, 1335
Bpu14I	TTCGAA	1 cut(s)	302
BpuEI	CTTGAG	4 cut(s)	52, 151, 179, 851
Bsa29I	ATCGAT	1 cut(s)	1194
BsaAI	YACGTR	2 cut(s)	438, 1279
BsaJI	CCNNGG	4 cut(s)	225, 320, 991, 1074
BsaWI	WCCGGW	2 cut(s)	1606, 1695
Bsc4I	CCNNNNNNNGG	3 cut(s)	353, 529, 1597
Bse118I	RCCGGY	1 cut(s)	1695
Bse1I	ACTGG	4 cut(s)	96, 406, 855, 1393
Bse21I	CCTNAGG	1 cut(s)	933
BseAI	TCCGGA	1 cut(s)	1606
BseBI	CCWGG	1 cut(s)	1547
BseCI	ATCGAT	1 cut(s)	1194
BseDI	CCNNGG	4 cut(s)	225, 320, 991, 1074
BseGI	GGATG	6 cut(s)	26, 416, 654, 1567, 1587, 1635
BseLI	CCNNNNNNNGG	3 cut(s)	353, 529, 1597
BseMII	CTCAG	6 cut(s)	105, 137, 171, 192, 623, 1326
BseNI	ACTGG	4 cut(s)	96, 406, 855, 1393
BseRI	GAGGAG	2 cut(s)	34, 37
BseXI	GCAGC	6 cut(s)	601, 627, 901, 904, 1017, 1028
Bsh1236I	CGCG	2 cut(s)	110, 1318
BshFI	GGCC	3 cut(s)	474, 1340, 1392
BshTI	ACCGGT	1 cut(s)	1695
BshVI	ATCGAT	1 cut(s)	1194
BsiHKCI	CYCGRG	2 cut(s)	423, 990
BsiSI	CCGG	3 cut(s)	1117, 1607, 1696
BslFI	GGGAC	1 cut(s)	1176
BslI	CCNNNNNNNGG	3 cut(s)	353, 529, 1597
BsmAI	GTCTC	1 cut(s)	749
BsmBI	CGTCTC	1 cut(s)	749
BsmFI	GGGAC	1 cut(s)	1176
BsmI	GAATGC	1 cut(s)	1488
BsnI	GGCC	3 cut(s)	474, 1340, 1392
BsoBI	CYCGRG	2 cut(s)	423, 990
Bsp119I	TTCGAA	1 cut(s)	302
Bsp13I	TCCGGA	1 cut(s)	1606
Bsp1407I	TGTACA	3 cut(s)	396, 1383, 1657
Bsp143I	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
BspACI	CCGC	9 cut(s)	108, 354, 458, 471, 710, 1318, 1397, 1516, 1633
BspANI	GGCC	3 cut(s)	474, 1340, 1392
BspCNI	CTCAG	6 cut(s)	104, 138, 172, 193, 624, 1327
BspDI	ATCGAT	1 cut(s)	1194
BspEI	TCCGGA	1 cut(s)	1606
BspFNI	CGCG	2 cut(s)	110, 1318
BspLI	GGNNCC	2 cut(s)	345, 1066
BspPI	GGATC	3 cut(s)	170, 923, 1417
BspQI	GCTCTTC	1 cut(s)	1605
BspT104I	TTCGAA	1 cut(s)	302
BsrFI	RCCGGY	1 cut(s)	1695
BsrGI	TGTACA	3 cut(s)	396, 1383, 1657
BsrI	ACTGG	4 cut(s)	96, 406, 855, 1393
BssAI	RCCGGY	1 cut(s)	1695
BssECI	CCNNGG	4 cut(s)	225, 320, 991, 1074
BssMI	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
BssT1I	CCWWGG	1 cut(s)	1074
Bst2UI	CCWGG	1 cut(s)	1547
Bst4CI	ACNGT	5 cut(s)	21, 226, 926, 1003, 1504
Bst6I	CTCTTC	2 cut(s)	1056, 1605
BstAUI	TGTACA	3 cut(s)	396, 1383, 1657
BstBAI	YACGTR	2 cut(s)	438, 1279
BstBI	TTCGAA	1 cut(s)	302
BstC8I	GCNNGC	5 cut(s)	469, 638, 1035, 1347, 1488
BstDEI	CTNAG	8 cut(s)	91, 137, 146, 180, 201, 632, 933, 1335
BstDSI	CCRYGG	1 cut(s)	225
BstENI	CCTNNNNNAGG	1 cut(s)	1595
BstF5I	GGATG	6 cut(s)	26, 416, 654, 1567, 1587, 1635
BstFNI	CGCG	2 cut(s)	110, 1318
BstH2I	RGCGCY	1 cut(s)	556
BstHHI	GCGC	3 cut(s)	112, 555, 1318
BstKTI	GATC	5 cut(s)	178, 931, 1198, 1248, 1412
BstMAI	GTCTC	1 cut(s)	749
BstMBI	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
BstMWI	GCNNNNNNNGC	6 cut(s)	360, 550, 633, 1039, 1282, 1346
BstNI	CCWGG	1 cut(s)	1547
BstNSI	RCATGY	1 cut(s)	1243
BstSCI	CCNGG	1 cut(s)	1545
BstSFI	CTRYAG	2 cut(s)	190, 693
BstUI	CGCG	2 cut(s)	110, 1318
BstV1I	GCAGC	6 cut(s)	601, 627, 901, 904, 1017, 1028
BstV2I	GAAGAC	2 cut(s)	597, 1722
Bsu15I	ATCGAT	1 cut(s)	1194
Bsu36I	CCTNAGG	1 cut(s)	933
BsuRI	GGCC	3 cut(s)	474, 1340, 1392
BsuTUI	ATCGAT	1 cut(s)	1194
BtgI	CCRYGG	1 cut(s)	225
BtsCI	GGATG	6 cut(s)	26, 416, 654, 1567, 1587, 1635
BtsI	GCAGTG	3 cut(s)	622, 649, 1044
BtsIMutI	CAGTG	5 cut(s)	399, 622, 649, 1044, 1386
Cac8I	GCNNGC	5 cut(s)	469, 638, 1035, 1347, 1488
CfoI	GCGC	3 cut(s)	112, 555, 1318
Cfr10I	RCCGGY	1 cut(s)	1695
Cfr13I	GGNCC	2 cut(s)	473, 672
ClaI	ATCGAT	1 cut(s)	1194
Csp6I	GTAC	4 cut(s)	397, 1004, 1384, 1658
CspAI	ACCGGT	1 cut(s)	1695
CspCI	CAANNNNNGTGG	4 cut(s)	424, 459, 552, 587
CviAII	CATG	9 cut(s)	80, 331, 461, 688, 713, 1010, 1240, 1576, 1681
CviQI	GTAC	4 cut(s)	397, 1004, 1384, 1658
DdeI	CTNAG	8 cut(s)	91, 137, 146, 180, 201, 632, 933, 1335
DpnI	GATC	5 cut(s)	177, 930, 1197, 1247, 1411
DpnII	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
Eam1104I	CTCTTC	2 cut(s)	1056, 1605
EarI	CTCTTC	2 cut(s)	1056, 1605
Eco130I	CCWWGG	1 cut(s)	1074
Eco32I	GATATC	1 cut(s)	730
Eco47I	GGWCC	1 cut(s)	672
Eco57I	CTGAAG	1 cut(s)	1667
Eco72I	CACGTG	2 cut(s)	438, 1279
Eco81I	CCTNAGG	1 cut(s)	933
Eco88I	CYCGRG	2 cut(s)	423, 990
EcoNI	CCTNNNNNAGG	1 cut(s)	1595
EcoRII	CCWGG	1 cut(s)	1545
EcoRV	GATATC	1 cut(s)	730
EcoT14I	CCWWGG	1 cut(s)	1074
EcoT22I	ATGCAT	2 cut(s)	85, 1193
ErhI	CCWWGG	1 cut(s)	1074
Esp3I	CGTCTC	1 cut(s)	749
FaeI	CATG	9 cut(s)	83, 334, 464, 691, 716, 1013, 1243, 1579, 1684
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	1 cut(s)	1176
FatI	CATG	9 cut(s)	79, 330, 460, 687, 712, 1009, 1239, 1575, 1680
FauI	CCCGC	1 cut(s)	347
FbaI	TGATCA	1 cut(s)	1245
Fnu4HI	GCNGC	9 cut(s)	472, 615, 641, 915, 918, 1017, 1031, 1398, 1517
FokI	GGATG	6 cut(s)	13, 403, 641, 1574, 1574, 1642
Fsp4HI	GCNGC	9 cut(s)	472, 615, 641, 915, 918, 1017, 1031, 1398, 1517
FspBI	CTAG	5 cut(s)	69, 959, 1043, 1202, 1295
GlaI	GCGC	3 cut(s)	111, 554, 1317
GluI	GCNGC	9 cut(s)	472, 615, 641, 915, 918, 1017, 1031, 1398, 1517
HaeII	RGCGCY	1 cut(s)	556
HaeIII	GGCC	3 cut(s)	474, 1340, 1392
HapII	CCGG	3 cut(s)	1117, 1607, 1696
HhaI	GCGC	3 cut(s)	112, 555, 1318
Hin1II	CATG	9 cut(s)	83, 334, 464, 691, 716, 1013, 1243, 1579, 1684
Hin6I	GCGC	3 cut(s)	110, 553, 1316
HinP1I	GCGC	3 cut(s)	110, 553, 1316
HindIII	AAGCTT	3 cut(s)	407, 677, 1343
HpaII	CCGG	3 cut(s)	1117, 1607, 1696
HphI	GGTGA	1 cut(s)	1270
Hpy166II	GTNNAC	4 cut(s)	317, 399, 435, 1386
Hpy188I	TCNGA	7 cut(s)	337, 838, 877, 1090, 1255, 1540, 1737
Hpy8I	GTNNAC	4 cut(s)	317, 399, 435, 1386
Hpy99I	CGWCG	3 cut(s)	1723, 1726, 1729
HpyAV	CCTTC	9 cut(s)	280, 305, 382, 523, 628, 1642, 1657, 1732, 1761
HpyCH4III	ACNGT	5 cut(s)	21, 226, 926, 1003, 1504
HpyCH4IV	ACGT	6 cut(s)	437, 594, 843, 884, 1024, 1278
HpyCH4V	TGCA	9 cut(s)	83, 654, 920, 1109, 1191, 1216, 1276, 1486, 1674
HpyF10VI	GCNNNNNNNGC	6 cut(s)	360, 550, 633, 1039, 1282, 1346
HpyF3I	CTNAG	8 cut(s)	91, 137, 146, 180, 201, 632, 933, 1335
HpySE526I	ACGT	6 cut(s)	437, 594, 843, 884, 1024, 1278
Hsp92II	CATG	9 cut(s)	83, 334, 464, 691, 716, 1013, 1243, 1579, 1684
HspAI	GCGC	3 cut(s)	110, 553, 1316
Kpn2I	TCCGGA	1 cut(s)	1606
Ksp22I	TGATCA	1 cut(s)	1245
Kzo9I	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
LguI	GCTCTTC	1 cut(s)	1605
LmnI	GCTCC	3 cut(s)	274, 744, 1064
Lsp1109I	GCAGC	6 cut(s)	601, 627, 901, 904, 1017, 1028
MaeI	CTAG	5 cut(s)	69, 959, 1043, 1202, 1295
MaeII	ACGT	6 cut(s)	437, 594, 843, 884, 1024, 1278
MaeIII	GTNAC	3 cut(s)	74, 168, 218
MalI	GATC	5 cut(s)	177, 930, 1197, 1247, 1411
MboI	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
MluCI	AATT	9 cut(s)	338, 484, 497, 597, 603, 783, 985, 1084, 1110
MlyI	GAGTC	2 cut(s)	142, 797
MmeI	TCCRAC	1 cut(s)	835
Mph1103I	ATGCAT	2 cut(s)	85, 1193
MroI	TCCGGA	1 cut(s)	1606
MroXI	GAANNNNTTC	2 cut(s)	342, 537
MseI	TTAA	4 cut(s)	411, 483, 942, 1497
MslI	CAYNNNNRTG	1 cut(s)	759
MspA1I	CMGCKG	1 cut(s)	640
MspI	CCGG	3 cut(s)	1117, 1607, 1696
MspR9I	CCNGG	1 cut(s)	1547
Mva1269I	GAATGC	1 cut(s)	1488
MvaI	CCWGG	1 cut(s)	1547
MvnI	CGCG	2 cut(s)	110, 1318
MwoI	GCNNNNNNNGC	6 cut(s)	360, 550, 633, 1039, 1282, 1346
NdeII	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
NlaIII	CATG	9 cut(s)	83, 334, 464, 691, 716, 1013, 1243, 1579, 1684
NlaIV	GGNNCC	2 cut(s)	345, 1066
NmeAIII	GCCGAG	1 cut(s)	138
NsiI	ATGCAT	2 cut(s)	85, 1193
NspI	RCATGY	1 cut(s)	1243
NspV	TTCGAA	1 cut(s)	302
PaeR7I	CTCGAG	1 cut(s)	423
PciI	ACATGT	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	1605
PcsI	WCGNNNNNNNCGW	4 cut(s)	960, 988, 1724, 1733
PctI	GAATGC	1 cut(s)	1488
PdmI	GAANNNNTTC	2 cut(s)	342, 537
PfeI	GAWTC	8 cut(s)	299, 767, 807, 816, 833, 872, 1169, 1620
PfoI	TCCNGGA	1 cut(s)	1545
PinAI	ACCGGT	1 cut(s)	1695
PkrI	GCNGC	9 cut(s)	473, 616, 642, 916, 919, 1018, 1032, 1399, 1518
PleI	GAGTC	2 cut(s)	141, 796
PmaCI	CACGTG	2 cut(s)	438, 1279
PmlI	CACGTG	2 cut(s)	438, 1279
PpsI	GAGTC	2 cut(s)	141, 796
Ppu21I	YACGTR	2 cut(s)	438, 1279
PscI	ACATGT	1 cut(s)	1239
PshBI	ATTAAT	1 cut(s)	483
Psp6I	CCWGG	1 cut(s)	1545
PspCI	CACGTG	2 cut(s)	438, 1279
PspGI	CCWGG	1 cut(s)	1545
PspN4I	GGNNCC	2 cut(s)	345, 1066
PspPI	GGNCC	2 cut(s)	473, 672
PsrI	GAACNNNNNNTAC	2 cut(s)	380, 412
PvuII	CAGCTG	1 cut(s)	640
RsaI	GTAC	4 cut(s)	398, 1005, 1385, 1659
RsaNI	GTAC	4 cut(s)	397, 1004, 1384, 1658
RseI	CAYNNNNRTG	1 cut(s)	759
SapI	GCTCTTC	1 cut(s)	1605
SaqAI	TTAA	4 cut(s)	411, 483, 942, 1497
SatI	GCNGC	9 cut(s)	472, 615, 641, 915, 918, 1017, 1031, 1398, 1517
Sau3AI	GATC	5 cut(s)	175, 928, 1195, 1245, 1409
Sau96I	GGNCC	2 cut(s)	473, 672
SchI	GAGTC	2 cut(s)	142, 797
ScrFI	CCNGG	1 cut(s)	1547
SfcI	CTRYAG	2 cut(s)	190, 693
Sfr274I	CTCGAG	1 cut(s)	423
SfuI	TTCGAA	1 cut(s)	302
SinI	GGWCC	1 cut(s)	672
SlaI	CTCGAG	1 cut(s)	423
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	5 cut(s)	31, 130, 158, 423, 866
SmoI	CTYRAG	5 cut(s)	31, 130, 158, 423, 866
Sse9I	AATT	9 cut(s)	338, 484, 497, 597, 603, 783, 985, 1084, 1110
SsiI	CCGC	9 cut(s)	108, 354, 458, 471, 710, 1318, 1397, 1516, 1633
SspMI	CTAG	5 cut(s)	69, 959, 1043, 1202, 1295
StyD4I	CCNGG	1 cut(s)	1545
StyI	CCWWGG	1 cut(s)	1074
TaaI	ACNGT	5 cut(s)	21, 226, 926, 1003, 1504
TaiI	ACGT	6 cut(s)	440, 597, 846, 887, 1027, 1281
TaqI	TCGA	5 cut(s)	302, 424, 791, 1194, 1593
TaqII	GACCGA	2 cut(s)	944, 1197
TasI	AATT	9 cut(s)	338, 484, 497, 597, 603, 783, 985, 1084, 1110
TatI	WGTACW	4 cut(s)	396, 1003, 1383, 1657
TauI	GCSGC	3 cut(s)	474, 1400, 1519
TfiI	GAWTC	8 cut(s)	299, 767, 807, 816, 833, 872, 1169, 1620
Tru1I	TTAA	4 cut(s)	411, 483, 942, 1497
Tru9I	TTAA	4 cut(s)	411, 483, 942, 1497
TscAI	CASTG	5 cut(s)	406, 629, 656, 1044, 1393
TseI	GCWGC	6 cut(s)	614, 640, 914, 917, 1016, 1030
TspDTI	ATGAA	8 cut(s)	30, 381, 542, 729, 780, 998, 1458, 1576
TspGWI	ACGGA	1 cut(s)	731
TspRI	CASTG	5 cut(s)	406, 629, 656, 1044, 1393
VpaK11BI	GGWCC	1 cut(s)	672
VspI	ATTAAT	1 cut(s)	483
XagI	CCTNNNNNAGG	1 cut(s)	1595
XbaI	TCTAGA	2 cut(s)	1201, 1294
XceI	RCATGY	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1348
XhoI	CTCGAG	1 cut(s)	423
XmnI	GAANNNNTTC	2 cut(s)	342, 537
XspI	CTAG	5 cut(s)	69, 959, 1043, 1202, 1295
Zsp2I	ATGCAT	2 cut(s)	85, 1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.