Prupe.4G107800_v2.0.a1

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000570
Physical Location & Seq
Reverse (-)
5625059 .. 5629715
4657 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G107800.3

Sequence Viewer

Length: 1764 bp
ATGGCTAATTCATCTGAACCATCATCCTCTTTGAGCTTTACTTCATCATCCCATATATCAAATGGTTCAATAAGCCACAACTTTTCTTCCTCTGGTTCTGAATCTGTGCCTAGTCTTGAAGTCATCAGTTTGAGCAAGCTTAGTTCTAATTTGGAGCAGCTCTTGGTTGATTCTGGCTGTGATTATAGTGATGCTGATATCATAGTTGAGGGGATTTCTGTTGGCGTTCACCGATGTATATTGGCTTCTAGGAGTAGTTTTTTCCGCGATCTATTCAAGCAAAAAAAGGGGTCTTCTGGGAAGGAAAGCAGATCAAAGTACTGTATCAGTGATTTGCTGCCTTATGGCGATGTTAGATATGAAGCCTTCTTGGTTTTTTTGAGCTATGTGTATACTGGAAAGTTGAAGCCTTCTCCCATGGAGGTGTCAACCTGTGTTCACAATGTATGTGCCCATGACGCGTGTAGACCTGCTATTAATTTCGTCGTGGAGTTGATGTACGCTTCTTCCATTTTCCAAATGCCTGATCTGGTTTCGATATTCCAGCGACGCCTTCTTAATTTTGTTGGGAAAGCTCTGGCAGACGATGTTATCCCAATCCTTGTAGTTGCTTTACATTGTCAGTTGAGTCAGCTCATCACTCAGTGTATAGAGAGAGTGGCACGATCGGATATTGATAGCATCTCTCTTGAGAAGGAACTTCCTGATGAGGTTATTGAGAAAATTAAAATTCTTCGCCGCAATTCTCAGCAAGACTGTGACCCAAACATGCCAGCAGTGGACCCTTTGCATGAAAAGAGAATCAGGAGAATACATAAGGCATTGGACTCAGATGATGTTGAACTTGTGAAACTTCTTTTAAGTGAGTCTGCTATAACCTTAGATGAAGCCAATGCTCTCCATTATGCTGCGGCTTACTGCGATCCTAAGGTTGTGACTGAAGTGCTTGGTCTGGGTCTAGCTGATGTTAACCTCCGGAATTCTCGGGGTTACACAGTACTTCACATTGCTGTGATGCGCAAAGAGCCATCAATTATAGTATTGCTTCTGACTAAAGGAGCTTGTGCATCAGAGCTGACATCAGATGGTCAGAGTGCTGTTAGTATTTGCCGGAGGTTGACAAGGCCGAAGGATTATCATTCAAAAACAGAGCAGGGGCAAGAAGCAAACAAGGACCGAATATGCATTGATGTTCTAGAGAGGGAAATGCGTAGGAATCCGATGGCTGGAGTTACATCAATATCTTCCCAAATAATGCCTGATGATCTGCACATGAAATTGCTGAACCTGGAGAATAGAGTGGCATTTGCGCGATTGTTATTCCCGGCTGAGGCCAAGCTAGCTATGGTCATTGCCCATGCTGAGACAACCTCTGAGTTTGCTGGGCGCTCTTCATCAAAAGGCTCAAGTGGGAATTTGATGGAGGTTGATTTAAATGAGACTCCCACTGTGCAGAACAAAAGACTCCATTCTAGGTTGGAAGCCCTAATGAAAACAGTCGATTTGGGTAGATGCTATTTCCCTCATTGCTCGGAAGTCCTGGATAAATTCATTGAGGACGACCTTCCTGATTTGTTCTACCTTGAGATGGGCACCTCTGACGAGCAGAAAATAAAGAGGATGCGTTTCATGGAGCTTAAGGAGGAAGTACACAAGGCCTTTAACAAGGACAAGGCTGAGTTGAACCTCTCTGGGTTGTCTTCATCATCCTCCACGTCGTCTCCGAAAAAACTTGGTGCAACTCAAAAAGTTAGGAAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0042802 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022 GO:2000031 GO:2001023 GO:2001038
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

588

Amino Acids

65.15

Weight (kDa)

6.27

Isoelectric Point (pI)

49.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000570)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45110 AT5G45110
fragaria_vesca FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa Rorug02G0432800 Rorug05G0051600
rosa_samantha Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1019
Acc36I ACCTGC 1 cut(s) 478
AccB1I GGYRCC 1 cut(s) 1592
AccI GTMKAC 2 cut(s) 392, 466
AccII CGCG 3 cut(s) 267, 461, 1312
AccIII TCCGGA 1 cut(s) 975
AciI CCGC 3 cut(s) 265, 739, 911
AclWI GGATC 1 cut(s) 917
AcsI RAATTY 4 cut(s) 729, 979, 1414, 1547
AcuI CTGAAG 1 cut(s) 960
AcyI GRCGYC 1 cut(s) 550
AdeI CACNNNGTG 1 cut(s) 645
AfaI GTAC 4 cut(s) 320, 500, 999, 1650
AfiI CCNNNNNNNGG 3 cut(s) 1226, 1330, 1588
AflII CTTAAG 1 cut(s) 1637
AflIII ACRYGT 1 cut(s) 459
AgsI TTSAA 7 cut(s) 69, 119, 277, 406, 842, 1143, 1684
AjiI CACGTC 1 cut(s) 1716
AjnI CCWGG 2 cut(s) 1287, 1539
Alw26I GTCTC 3 cut(s) 1358, 1433, 1725
AlwI GGATC 1 cut(s) 917
Ama87I CYCGRG 1 cut(s) 984
Aor13HI TCCGGA 1 cut(s) 975
AoxI GGCC 3 cut(s) 1124, 1332, 1656
ApeKI GCWGC 3 cut(s) 157, 337, 908
ApoI RAATTY 4 cut(s) 729, 979, 1414, 1547
AseI ATTAAT 1 cut(s) 477
AspLEI GCGC 3 cut(s) 1020, 1312, 1389
AspS9I GGNCC 2 cut(s) 781, 1174
AsuC2I CCSGG 1 cut(s) 1325
AsuHPI GGTGA 1 cut(s) 221
AsuNHI GCTAGC 1 cut(s) 1339
AvaI CYCGRG 1 cut(s) 984
AvaII GGWCC 2 cut(s) 781, 1174
AxyI CCTNAGG 1 cut(s) 927
BaeGI GKGCMC 2 cut(s) 454, 1595
BanI GGYRCC 1 cut(s) 1592
BarI GAAGNNNNNNTAC 2 cut(s) 229, 261
BbsI GAAGAC 2 cut(s) 285, 1692
BbvCI CCTCAGC 1 cut(s) 1329
BbvI GCAGC 3 cut(s) 169, 324, 895
BccI CCATC 6 cut(s) 28, 1036, 1079, 1216, 1414, 1582
BciT130I CCWGG 2 cut(s) 1289, 1541
BcnI CCSGG 1 cut(s) 1325
BcoDI GTCTC 3 cut(s) 1358, 1433, 1725
BfaI CTAG 6 cut(s) 111, 249, 959, 1196, 1340, 1473
BfoI RGCGCY 1 cut(s) 1390
BfrI CTTAAG 1 cut(s) 1637
BfuAI ACCTGC 1 cut(s) 478
BisI GCNGC 5 cut(s) 158, 338, 739, 909, 912
BlsI GCNGC 5 cut(s) 159, 339, 740, 910, 913
BmcAI AGTACT 2 cut(s) 320, 999
Bme1390I CCNGG 3 cut(s) 1289, 1325, 1541
Bme18I GGWCC 2 cut(s) 781, 1174
BmeT110I CYCGRG 1 cut(s) 984
BmgBI CACGTC 1 cut(s) 1716
BmgT120I GGNCC 2 cut(s) 781, 1174
BmiI GGNNCC 2 cut(s) 783, 1594
BmrFI CCNGG 3 cut(s) 1289, 1325, 1541
BmsI GCATC 6 cut(s) 181, 690, 1005, 1076, 1502, 1611
BmtI GCTAGC 1 cut(s) 1343
BpiI GAAGAC 2 cut(s) 285, 1692
BplI GAGNNNNNCTC 2 cut(s) 1355, 1387
BpmI CTGGAG 2 cut(s) 1248, 1310
Bpu10I CCTNAGC 1 cut(s) 1329
BpuEI CTTGAG 3 cut(s) 710, 1390, 1604
BpuMI CCSGG 1 cut(s) 1325
BsaHI GRCGYC 1 cut(s) 550
BsaJI CCNNGG 1 cut(s) 417
BsaWI WCCGGW 1 cut(s) 975
BsaXI ACNNNNNCTCC 4 cut(s) 482, 512, 1705, 1735
Bsc4I CCNNNNNNNGG 3 cut(s) 1226, 1330, 1588
Bse1I ACTGG 1 cut(s) 400
Bse21I CCTNAGG 1 cut(s) 927
Bse3DI GCAATG 3 cut(s) 1005, 1350, 1525
BseAI TCCGGA 1 cut(s) 975
BseBI CCWGG 2 cut(s) 1289, 1541
BseDI CCNNGG 1 cut(s) 417
BseGI GGATG 4 cut(s) 23, 47, 1626, 1706
BseLI CCNNNNNNNGG 3 cut(s) 1226, 1330, 1588
BseMI GCAATG 3 cut(s) 1005, 1350, 1525
BseMII CTCAG 7 cut(s) 656, 761, 843, 1320, 1353, 1365, 1668
BseNI ACTGG 1 cut(s) 400
BseSI GKGCMC 2 cut(s) 454, 1595
BseXI GCAGC 3 cut(s) 169, 324, 895
BseYI CCCAGC 1 cut(s) 1382
BsgI GTGCAG 2 cut(s) 1253, 1472
Bsh1236I CGCG 3 cut(s) 267, 461, 1312
Bsh1285I CGRYCG 1 cut(s) 668
BshFI GGCC 3 cut(s) 1126, 1334, 1658
BshNI GGYRCC 1 cut(s) 1592
BsiEI CGRYCG 1 cut(s) 668
BsiHKCI CYCGRG 1 cut(s) 984
BsiSI CCGG 3 cut(s) 976, 1111, 1325
BslI CCNNNNNNNGG 3 cut(s) 1226, 1330, 1588
BsmAI GTCTC 3 cut(s) 1358, 1433, 1725
BsmBI CGTCTC 1 cut(s) 1725
BsnI GGCC 3 cut(s) 1126, 1334, 1658
BsoBI CYCGRG 1 cut(s) 984
Bsp1286I GDGCHC 2 cut(s) 454, 1595
Bsp13I TCCGGA 1 cut(s) 975
Bsp143I GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
Bsp19I CCATGG 1 cut(s) 417
BspACI CCGC 3 cut(s) 265, 739, 911
BspANI GGCC 3 cut(s) 1126, 1334, 1658
BspCNI CTCAG 7 cut(s) 655, 760, 842, 1321, 1354, 1366, 1669
BspEI TCCGGA 1 cut(s) 975
BspFNI CGCG 3 cut(s) 267, 461, 1312
BspLI GGNNCC 2 cut(s) 783, 1594
BspMI ACCTGC 1 cut(s) 478
BspOI GCTAGC 1 cut(s) 1343
BspPI GGATC 1 cut(s) 917
BspQI GCTCTTC 1 cut(s) 1396
BspT107I GGYRCC 1 cut(s) 1592
BspTI CTTAAG 1 cut(s) 1637
BsrDI GCAATG 3 cut(s) 1005, 1350, 1525
BsrI ACTGG 1 cut(s) 400
BssECI CCNNGG 1 cut(s) 417
BssMI GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
BssNAI GTATAC 1 cut(s) 393
BssNI GRCGYC 1 cut(s) 550
BssT1I CCWWGG 1 cut(s) 417
Bst1107I GTATAC 1 cut(s) 393
Bst2UI CCWGG 2 cut(s) 1289, 1541
Bst4CI ACNGT 5 cut(s) 323, 758, 997, 1450, 1498
Bst6I CTCTTC 1 cut(s) 1396
BstACI GRCGYC 1 cut(s) 550
BstAFI CTTAAG 1 cut(s) 1637
BstC8I GCNNGC 3 cut(s) 137, 774, 1341
BstDSI CCRYGG 1 cut(s) 417
BstF5I GGATG 4 cut(s) 23, 47, 1626, 1706
BstFNI CGCG 3 cut(s) 267, 461, 1312
BstH2I RGCGCY 1 cut(s) 1390
BstHHI GCGC 3 cut(s) 1020, 1312, 1389
BstKTI GATC 6 cut(s) 271, 314, 529, 668, 925, 1267
BstMAI GTCTC 3 cut(s) 1358, 1433, 1725
BstMBI GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
BstMCI CGRYCG 1 cut(s) 668
BstMWI GCNNNNNNNGC 3 cut(s) 458, 1024, 1340
BstNI CCWGG 2 cut(s) 1289, 1541
BstNSI RCATGY 1 cut(s) 772
BstSCI CCNGG 3 cut(s) 1287, 1323, 1539
BstSLI GKGCMC 2 cut(s) 454, 1595
BstUI CGCG 3 cut(s) 267, 461, 1312
BstV1I GCAGC 3 cut(s) 169, 324, 895
BstV2I GAAGAC 2 cut(s) 285, 1692
BstZ17I GTATAC 1 cut(s) 393
Bsu36I CCTNAGG 1 cut(s) 927
BsuRI GGCC 3 cut(s) 1126, 1334, 1658
BtgI CCRYGG 1 cut(s) 417
BtgZI GCGATG 1 cut(s) 363
BtrI CACGTC 1 cut(s) 1716
BtsCI GGATG 4 cut(s) 23, 47, 1626, 1706
BtsI GCAGTG 1 cut(s) 783
BtsIMutI CAGTG 4 cut(s) 334, 650, 783, 1446
BveI ACCTGC 1 cut(s) 478
Cac8I GCNNGC 3 cut(s) 137, 774, 1341
CfoI GCGC 3 cut(s) 1020, 1312, 1389
Cfr13I GGNCC 2 cut(s) 781, 1174
CseI GACGC 2 cut(s) 467, 558
Csp6I GTAC 4 cut(s) 319, 499, 998, 1649
CviAII CATG 7 cut(s) 418, 455, 769, 791, 1273, 1358, 1630
CviQI GTAC 4 cut(s) 319, 499, 998, 1649
DpnI GATC 6 cut(s) 270, 313, 528, 667, 924, 1266
DpnII GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
DraI TTTAAA 1 cut(s) 1434
DraIII CACNNNGTG 1 cut(s) 645
Eam1104I CTCTTC 1 cut(s) 1396
EarI CTCTTC 1 cut(s) 1396
Eco130I CCWWGG 1 cut(s) 417
Eco147I AGGCCT 1 cut(s) 1658
Eco32I GATATC 1 cut(s) 199
Eco47I GGWCC 2 cut(s) 781, 1174
Eco57I CTGAAG 1 cut(s) 960
Eco81I CCTNAGG 1 cut(s) 927
Eco88I CYCGRG 1 cut(s) 984
EcoRI GAATTC 1 cut(s) 979
EcoRII CCWGG 2 cut(s) 1287, 1539
EcoRV GATATC 1 cut(s) 199
EcoT14I CCWWGG 1 cut(s) 417
EcoT22I ATGCAT 1 cut(s) 1187
ErhI CCWWGG 1 cut(s) 417
Esp3I CGTCTC 1 cut(s) 1725
FaeI CATG 7 cut(s) 421, 458, 772, 794, 1276, 1361, 1633
FatI CATG 7 cut(s) 417, 454, 768, 790, 1272, 1357, 1629
FblI GTMKAC 2 cut(s) 392, 466
Fnu4HI GCNGC 5 cut(s) 158, 338, 739, 909, 912
FokI GGATG 4 cut(s) 10, 34, 1633, 1693
Fsp4HI GCNGC 5 cut(s) 158, 338, 739, 909, 912
FspBI CTAG 6 cut(s) 111, 249, 959, 1196, 1340, 1473
FspI TGCGCA 1 cut(s) 1019
GlaI GCGC 3 cut(s) 1019, 1311, 1388
GluI GCNGC 5 cut(s) 158, 338, 739, 909, 912
GsaI CCCAGC 1 cut(s) 1386
GsuI CTGGAG 2 cut(s) 1248, 1310
HaeII RGCGCY 1 cut(s) 1390
HaeIII GGCC 3 cut(s) 1126, 1334, 1658
HapII CCGG 3 cut(s) 976, 1111, 1325
HgaI GACGC 2 cut(s) 467, 558
HhaI GCGC 3 cut(s) 1020, 1312, 1389
Hin1I GRCGYC 1 cut(s) 550
Hin1II CATG 7 cut(s) 421, 458, 772, 794, 1276, 1361, 1633
Hin6I GCGC 3 cut(s) 1018, 1310, 1387
HinP1I GCGC 3 cut(s) 1018, 1310, 1387
HincII GTYRAC 3 cut(s) 429, 970, 1119
HindII GTYRAC 3 cut(s) 429, 970, 1119
HindIII AAGCTT 1 cut(s) 137
HinfI GANTC 9 cut(s) 101, 170, 628, 801, 827, 866, 1216, 1441, 1464
HpaI GTTAAC 1 cut(s) 970
HpaII CCGG 3 cut(s) 976, 1111, 1325
HphI GGTGA 1 cut(s) 221
Hpy166II GTNNAC 9 cut(s) 229, 393, 429, 439, 467, 781, 970, 1119, 1651
Hpy188III TCNNGA 7 cut(s) 116, 689, 704, 805, 976, 1196, 1568
Hpy8I GTNNAC 9 cut(s) 229, 393, 429, 439, 467, 781, 970, 1119, 1651
Hpy99I CGWCG 3 cut(s) 488, 552, 1720
HpyAV CCTTC 7 cut(s) 295, 376, 420, 563, 688, 1123, 1574
HpyCH4III ACNGT 5 cut(s) 323, 758, 997, 1450, 1498
HpyCH4IV ACGT 1 cut(s) 1715
HpyCH4V TGCA 6 cut(s) 790, 1067, 1185, 1270, 1453, 1739
HpyF10VI GCNNNNNNNGC 3 cut(s) 458, 1024, 1340
HpySE526I ACGT 1 cut(s) 1715
Hsp92I GRCGYC 1 cut(s) 550
Hsp92II CATG 7 cut(s) 421, 458, 772, 794, 1276, 1361, 1633
HspAI GCGC 3 cut(s) 1018, 1310, 1387
Kpn2I TCCGGA 1 cut(s) 975
KspAI GTTAAC 1 cut(s) 970
Kzo9I GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
LguI GCTCTTC 1 cut(s) 1396
LmnI GCTCC 3 cut(s) 154, 1058, 1633
Lsp1109I GCAGC 3 cut(s) 169, 324, 895
LweI GCATC 6 cut(s) 181, 690, 1005, 1076, 1502, 1611
MaeI CTAG 6 cut(s) 111, 249, 959, 1196, 1340, 1473
MaeII ACGT 1 cut(s) 1715
MaeIII GTNAC 4 cut(s) 758, 934, 989, 1231
MalI GATC 6 cut(s) 270, 313, 528, 667, 924, 1266
MboI GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
MboII GAAGA 7 cut(s) 78, 285, 498, 725, 1236, 1383, 1692
MhlI GDGCHC 2 cut(s) 454, 1595
MluI ACGCGT 1 cut(s) 459
MlyI GAGTC 5 cut(s) 637, 821, 875, 1435, 1458
MmeI TCCRAC 1 cut(s) 1458
Mph1103I ATGCAT 1 cut(s) 1187
MroI TCCGGA 1 cut(s) 975
MseI TTAA 8 cut(s) 477, 558, 726, 860, 969, 1433, 1638, 1662
MslI CAYNNNNRTG 2 cut(s) 422, 1010
MspCI CTTAAG 1 cut(s) 1637
MspI CCGG 3 cut(s) 976, 1111, 1325
MspR9I CCNGG 3 cut(s) 1289, 1325, 1541
MvaI CCWGG 2 cut(s) 1289, 1541
MvnI CGCG 3 cut(s) 267, 461, 1312
MwoI GCNNNNNNNGC 3 cut(s) 458, 1024, 1340
NciI CCSGG 1 cut(s) 1325
NcoI CCATGG 1 cut(s) 417
NdeII GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
NheI GCTAGC 1 cut(s) 1339
NlaIII CATG 7 cut(s) 421, 458, 772, 794, 1276, 1361, 1633
NlaIV GGNNCC 2 cut(s) 783, 1594
NmuCI GTSAC 2 cut(s) 758, 934
NsbI TGCGCA 1 cut(s) 1019
NsiI ATGCAT 1 cut(s) 1187
NspI RCATGY 1 cut(s) 772
PceI AGGCCT 1 cut(s) 1658
PciSI GCTCTTC 1 cut(s) 1396
PcsI WCGNNNNNNNCGW 1 cut(s) 1721
PfeI GAWTC 4 cut(s) 101, 170, 801, 1216
PfoI TCCNGGA 1 cut(s) 1539
PkrI GCNGC 5 cut(s) 159, 339, 740, 910, 913
Ple19I CGATCG 1 cut(s) 668
PleI GAGTC 5 cut(s) 636, 821, 874, 1435, 1458
PpsI GAGTC 5 cut(s) 636, 821, 874, 1435, 1458
PshBI ATTAAT 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 1287, 1539
PspFI CCCAGC 1 cut(s) 1382
PspGI CCWGG 2 cut(s) 1287, 1539
PspN4I GGNNCC 2 cut(s) 783, 1594
PspPI GGNCC 2 cut(s) 781, 1174
PvuI CGATCG 1 cut(s) 668
RsaI GTAC 4 cut(s) 320, 500, 999, 1650
RsaNI GTAC 4 cut(s) 319, 499, 998, 1649
RseI CAYNNNNRTG 2 cut(s) 422, 1010
SapI GCTCTTC 1 cut(s) 1396
SaqAI TTAA 8 cut(s) 477, 558, 726, 860, 969, 1433, 1638, 1662
SatI GCNGC 5 cut(s) 158, 338, 739, 909, 912
Sau3AI GATC 6 cut(s) 268, 311, 526, 665, 922, 1264
Sau96I GGNCC 2 cut(s) 781, 1174
ScaI AGTACT 2 cut(s) 320, 999
SchI GAGTC 5 cut(s) 637, 821, 875, 1435, 1458
ScrFI CCNGG 3 cut(s) 1289, 1325, 1541
SduI GDGCHC 2 cut(s) 454, 1595
SfaNI GCATC 6 cut(s) 181, 690, 1005, 1076, 1502, 1611
SinI GGWCC 2 cut(s) 781, 1174
SmiI ATTTAAAT 1 cut(s) 1434
SmiMI CAYNNNNRTG 2 cut(s) 422, 1010
SmlI CTYRAG 4 cut(s) 689, 1405, 1583, 1637
SmoI CTYRAG 4 cut(s) 689, 1405, 1583, 1637
SseBI AGGCCT 1 cut(s) 1658
SsiI CCGC 3 cut(s) 265, 739, 911
SspMI CTAG 6 cut(s) 111, 249, 959, 1196, 1340, 1473
StuI AGGCCT 1 cut(s) 1658
StyD4I CCNGG 3 cut(s) 1287, 1323, 1539
StyI CCWWGG 1 cut(s) 417
SwaI ATTTAAAT 1 cut(s) 1434
TaaI ACNGT 5 cut(s) 323, 758, 997, 1450, 1498
TaiI ACGT 1 cut(s) 1718
TaqI TCGA 2 cut(s) 536, 1500
TaqII GACCGA 1 cut(s) 1191
TatI WGTACW 3 cut(s) 318, 997, 1648
TauI GCSGC 2 cut(s) 741, 914
TfiI GAWTC 4 cut(s) 101, 170, 801, 1216
Tru1I TTAA 8 cut(s) 477, 558, 726, 860, 969, 1433, 1638, 1662
Tru9I TTAA 8 cut(s) 477, 558, 726, 860, 969, 1433, 1638, 1662
TscAI CASTG 4 cut(s) 334, 650, 783, 1453
TseFI GTSAC 2 cut(s) 758, 934
TseI GCWGC 3 cut(s) 157, 337, 908
Tsp45I GTSAC 2 cut(s) 758, 934
TspRI CASTG 4 cut(s) 334, 650, 783, 1453
Vha464I CTTAAG 1 cut(s) 1637
VpaK11BI GGWCC 2 cut(s) 781, 1174
VspI ATTAAT 1 cut(s) 477
XapI RAATTY 4 cut(s) 729, 979, 1414, 1547
XbaI TCTAGA 1 cut(s) 1195
XceI RCATGY 1 cut(s) 772
XcmI CCANNNNNNNNNTGG 2 cut(s) 59, 1342
XmiI GTMKAC 2 cut(s) 392, 466
XspI CTAG 6 cut(s) 111, 249, 959, 1196, 1340, 1473
ZrmI AGTACT 2 cut(s) 320, 999
Zsp2I ATGCAT 1 cut(s) 1187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.