Regulatory protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 977 |
| AarI | CACCTGC | 3 cut(s) | 1294, 1525, 1916 |
| Acc36I | ACCTGC | 5 cut(s) | 219, 1294, 1525, 1610, 1916 |
| AccB1I | GGYRCC | 2 cut(s) | 1153, 1600 |
| AccBSI | CCGCTC | 1 cut(s) | 2269 |
| AccII | CGCG | 1 cut(s) | 570 |
| AccIII | TCCGGA | 1 cut(s) | 2397 |
| AclI | AACGTT | 1 cut(s) | 2287 |
| AclWI | GGATC | 3 cut(s) | 1564, 1615, 1767 |
| AcoI | YGGCCR | 1 cut(s) | 1295 |
| AcsI | RAATTY | 3 cut(s) | 151, 2102, 2354 |
| AcuI | CTGAAG | 1 cut(s) | 178 |
| AcyI | GRCGYC | 1 cut(s) | 1154 |
| AdeI | CACNNNGTG | 1 cut(s) | 1766 |
| AfaI | GTAC | 3 cut(s) | 297, 1422, 1551 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 664, 1718, 1722, 1733, 1763 |
| AflIII | ACRYGT | 2 cut(s) | 218, 466 |
| AjnI | CCWGG | 2 cut(s) | 345, 1603 |
| AleI | CACNNNNGTG | 1 cut(s) | 493 |
| Alw26I | GTCTC | 4 cut(s) | 335, 795, 851, 2123 |
| AlwI | GGATC | 3 cut(s) | 1564, 1615, 1767 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 993, 1025, 1286, 1517 |
| Aor13HI | TCCGGA | 1 cut(s) | 2397 |
| AoxI | GGCC | 3 cut(s) | 348, 1295, 1724 |
| ApoI | RAATTY | 3 cut(s) | 151, 2102, 2354 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1813, 1845 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2001, 2106 |
| AspA2I | CCTAGG | 1 cut(s) | 2260 |
| AspLEI | GCGC | 3 cut(s) | 172, 1156, 1922 |
| AspS9I | GGNCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| AsuNHI | GCTAGC | 1 cut(s) | 2443 |
| AvaII | GGWCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| AvrII | CCTAGG | 1 cut(s) | 2260 |
| AxyI | CCTNAGG | 4 cut(s) | 663, 1314, 1545, 2428 |
| BanI | GGYRCC | 2 cut(s) | 1153, 1600 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 214, 246 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2585, 2619 |
| BciT130I | CCWGG | 2 cut(s) | 347, 1605 |
| BclI | TGATCA | 1 cut(s) | 2223 |
| BcoDI | GTCTC | 4 cut(s) | 335, 795, 851, 2123 |
| BfaI | CTAG | 7 cut(s) | 624, 1290, 1521, 1952, 2261, 2444, 2627 |
| BfmI | CTRYAG | 2 cut(s) | 333, 559 |
| BfoI | RGCGCY | 2 cut(s) | 173, 1157 |
| BfuAI | ACCTGC | 5 cut(s) | 219, 1294, 1525, 1610, 1916 |
| BlnI | CCTAGG | 1 cut(s) | 2260 |
| Bme1390I | CCNGG | 2 cut(s) | 347, 1605 |
| Bme18I | GGWCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| BmgT120I | GGNCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| BmiI | GGNNCC | 9 cut(s) | 461, 475, 682, 814, 936, 1155, 1602, 2256, 2500 |
| BmrFI | CCNGG | 2 cut(s) | 347, 1605 |
| BmrI | ACTGGG | 1 cut(s) | 1562 |
| BmsI | GCATC | 5 cut(s) | 252, 338, 1632, 1667, 1936 |
| BmtI | GCTAGC | 1 cut(s) | 2447 |
| BmuI | ACTGGG | 1 cut(s) | 1562 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BpmI | CTGGAG | 1 cut(s) | 2345 |
| Bpu10I | CCTNAGC | 1 cut(s) | 173 |
| BpuEI | CTTGAG | 2 cut(s) | 512, 1829 |
| BsaHI | GRCGYC | 1 cut(s) | 1154 |
| BsaI | GGTCTC | 1 cut(s) | 335 |
| BsaJI | CCNNGG | 4 cut(s) | 345, 1596, 1716, 2260 |
| BsaWI | WCCGGW | 1 cut(s) | 2397 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1885, 1915 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 664, 1718, 1722, 1733, 1763 |
| Bse118I | RCCGGY | 1 cut(s) | 1645 |
| Bse1I | ACTGG | 2 cut(s) | 1557, 2328 |
| Bse21I | CCTNAGG | 4 cut(s) | 663, 1314, 1545, 2428 |
| Bse3DI | GCAATG | 5 cut(s) | 367, 1130, 1361, 2226, 2418 |
| BseAI | TCCGGA | 1 cut(s) | 2397 |
| BseBI | CCWGG | 2 cut(s) | 347, 1605 |
| BseDI | CCNNGG | 4 cut(s) | 345, 1596, 1716, 2260 |
| BseGI | GGATG | 9 cut(s) | 205, 396, 547, 647, 1814, 1883, 2344, 2394, 2425 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 664, 1718, 1722, 1733, 1763 |
| BseMI | GCAATG | 5 cut(s) | 367, 1130, 1361, 2226, 2418 |
| BseMII | CTCAG | 4 cut(s) | 410, 654, 2036, 2442 |
| BseNI | ACTGG | 2 cut(s) | 1557, 2328 |
| BseYI | CCCAGC | 1 cut(s) | 1910 |
| BsgI | GTGCAG | 2 cut(s) | 767, 1743 |
| Bsh1236I | CGCG | 1 cut(s) | 570 |
| BshFI | GGCC | 3 cut(s) | 350, 1297, 1726 |
| BshNI | GGYRCC | 2 cut(s) | 1153, 1600 |
| BsiSI | CCGG | 2 cut(s) | 1646, 2398 |
| BslFI | GGGAC | 3 cut(s) | 473, 530, 920 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 664, 1718, 1722, 1733, 1763 |
| BsmAI | GTCTC | 4 cut(s) | 335, 795, 851, 2123 |
| BsmBI | CGTCTC | 1 cut(s) | 851 |
| BsmFI | GGGAC | 3 cut(s) | 473, 530, 920 |
| BsmI | GAATGC | 1 cut(s) | 454 |
| BsnI | GGCC | 3 cut(s) | 350, 1297, 1726 |
| Bso31I | GGTCTC | 1 cut(s) | 335 |
| Bsp13I | TCCGGA | 1 cut(s) | 2397 |
| Bsp19I | CCATGG | 2 cut(s) | 1596, 1716 |
| BspANI | GGCC | 3 cut(s) | 350, 1297, 1726 |
| BspCNI | CTCAG | 4 cut(s) | 411, 655, 2037, 2441 |
| BspEI | TCCGGA | 1 cut(s) | 2397 |
| BspFNI | CGCG | 1 cut(s) | 570 |
| BspLI | GGNNCC | 9 cut(s) | 461, 475, 682, 814, 936, 1155, 1602, 2256, 2500 |
| BspMAI | CTGCAG | 1 cut(s) | 563 |
| BspMI | ACCTGC | 5 cut(s) | 219, 1294, 1525, 1610, 1916 |
| BspOI | GCTAGC | 1 cut(s) | 2447 |
| BspPI | GGATC | 3 cut(s) | 1564, 1615, 1767 |
| BspT107I | GGYRCC | 2 cut(s) | 1153, 1600 |
| BspTNI | GGTCTC | 1 cut(s) | 335 |
| BsrBI | CCGCTC | 1 cut(s) | 2269 |
| BsrDI | GCAATG | 5 cut(s) | 367, 1130, 1361, 2226, 2418 |
| BsrFI | RCCGGY | 1 cut(s) | 1645 |
| BsrI | ACTGG | 2 cut(s) | 1557, 2328 |
| BssAI | RCCGGY | 1 cut(s) | 1645 |
| BssECI | CCNNGG | 4 cut(s) | 345, 1596, 1716, 2260 |
| BssNI | GRCGYC | 1 cut(s) | 1154 |
| BssT1I | CCWWGG | 3 cut(s) | 1596, 1716, 2260 |
| Bst2UI | CCWGG | 2 cut(s) | 347, 1605 |
| Bst4CI | ACNGT | 7 cut(s) | 478, 862, 973, 995, 1222, 1453, 2477 |
| Bst6I | CTCTTC | 4 cut(s) | 333, 798, 1802, 2455 |
| BstACI | GRCGYC | 1 cut(s) | 1154 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1286, 1517 |
| BstC8I | GCNNGC | 5 cut(s) | 750, 1299, 1692, 1728, 2445 |
| BstDEI | CTNAG | 8 cut(s) | 173, 419, 592, 663, 1314, 1545, 2045, 2428 |
| BstDSI | CCRYGG | 2 cut(s) | 1596, 1716 |
| BstEII | GGTNACC | 1 cut(s) | 1527 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 662 |
| BstF5I | GGATG | 9 cut(s) | 205, 396, 547, 647, 1814, 1883, 2344, 2394, 2425 |
| BstFNI | CGCG | 1 cut(s) | 570 |
| BstH2I | RGCGCY | 2 cut(s) | 173, 1157 |
| BstHHI | GCGC | 3 cut(s) | 172, 1156, 1922 |
| BstMAI | GTCTC | 4 cut(s) | 335, 795, 851, 2123 |
| BstNI | CCWGG | 2 cut(s) | 347, 1605 |
| BstNSI | RCATGY | 2 cut(s) | 222, 2614 |
| BstPI | GGTNACC | 1 cut(s) | 1527 |
| BstSCI | CCNGG | 2 cut(s) | 345, 1603 |
| BstSFI | CTRYAG | 2 cut(s) | 333, 559 |
| BstUI | CGCG | 1 cut(s) | 570 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 1772 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 470 |
| BstYI | RGATCY | 1 cut(s) | 1772 |
| Bsu36I | CCTNAGG | 4 cut(s) | 663, 1314, 1545, 2428 |
| BsuRI | GGCC | 3 cut(s) | 350, 1297, 1726 |
| BtgI | CCRYGG | 2 cut(s) | 1596, 1716 |
| BtsCI | GGATG | 9 cut(s) | 205, 396, 547, 647, 1814, 1883, 2344, 2394, 2425 |
| BtsI | GCAGTG | 6 cut(s) | 759, 1181, 1199, 1319, 1412, 1430 |
| BveI | ACCTGC | 5 cut(s) | 219, 1294, 1525, 1610, 1916 |
| Cac8I | GCNNGC | 5 cut(s) | 750, 1299, 1692, 1728, 2445 |
| CaiI | CAGNNNCTG | 4 cut(s) | 993, 1025, 1286, 1517 |
| CfoI | GCGC | 3 cut(s) | 172, 1156, 1922 |
| Cfr10I | RCCGGY | 1 cut(s) | 1645 |
| Cfr13I | GGNCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| CseI | GACGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 3 cut(s) | 296, 1421, 1550 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1665, 1700 |
| CviQI | GTAC | 3 cut(s) | 296, 1421, 1550 |
| DdeI | CTNAG | 8 cut(s) | 173, 419, 592, 663, 1314, 1545, 2045, 2428 |
| DinI | GGCGCC | 1 cut(s) | 1155 |
| DraIII | CACNNNGTG | 1 cut(s) | 1766 |
| EaeI | YGGCCR | 1 cut(s) | 1295 |
| Eam1104I | CTCTTC | 4 cut(s) | 333, 798, 1802, 2455 |
| EarI | CTCTTC | 4 cut(s) | 333, 798, 1802, 2455 |
| Eco130I | CCWWGG | 3 cut(s) | 1596, 1716, 2260 |
| Eco147I | AGGCCT | 1 cut(s) | 1726 |
| Eco31I | GGTCTC | 1 cut(s) | 335 |
| Eco47I | GGWCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| Eco57I | CTGAAG | 1 cut(s) | 178 |
| Eco81I | CCTNAGG | 4 cut(s) | 663, 1314, 1545, 2428 |
| Eco91I | GGTNACC | 1 cut(s) | 1527 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 662 |
| EcoO109I | RGGNCCY | 1 cut(s) | 934 |
| EcoO65I | GGTNACC | 1 cut(s) | 1527 |
| EcoRI | GAATTC | 1 cut(s) | 2102 |
| EcoRII | CCWGG | 2 cut(s) | 345, 1603 |
| EcoT14I | CCWWGG | 3 cut(s) | 1596, 1716, 2260 |
| EcoT22I | ATGCAT | 1 cut(s) | 2534 |
| EgeI | GGCGCC | 1 cut(s) | 1155 |
| EheI | GGCGCC | 1 cut(s) | 1155 |
| ErhI | CCWWGG | 3 cut(s) | 1596, 1716, 2260 |
| Esp3I | CGTCTC | 1 cut(s) | 851 |
| FaqI | GGGAC | 3 cut(s) | 473, 530, 920 |
| FauI | CCCGC | 2 cut(s) | 1248, 1254 |
| FbaI | TGATCA | 1 cut(s) | 2223 |
| FokI | GGATG | 9 cut(s) | 212, 403, 554, 634, 1801, 1870, 2351, 2381, 2432 |
| FspBI | CTAG | 7 cut(s) | 624, 1290, 1521, 1952, 2261, 2444, 2627 |
| GlaI | GCGC | 3 cut(s) | 171, 1155, 1921 |
| GsaI | CCCAGC | 1 cut(s) | 1914 |
| GsuI | CTGGAG | 1 cut(s) | 2345 |
| HaeII | RGCGCY | 2 cut(s) | 173, 1157 |
| HaeIII | GGCC | 3 cut(s) | 350, 1297, 1726 |
| HapII | CCGG | 2 cut(s) | 1646, 2398 |
| HgaI | GACGC | 1 cut(s) | 60 |
| HhaI | GCGC | 3 cut(s) | 172, 1156, 1922 |
| Hin1I | GRCGYC | 1 cut(s) | 1154 |
| Hin6I | GCGC | 3 cut(s) | 170, 1154, 1920 |
| HinP1I | GCGC | 3 cut(s) | 170, 1154, 1920 |
| HindIII | AAGCTT | 2 cut(s) | 708, 1867 |
| HinfI | GANTC | 9 cut(s) | 85, 131, 383, 588, 605, 1840, 2157, 2362, 2642 |
| HpaII | CCGG | 2 cut(s) | 1646, 2398 |
| Hpy166II | GTNNAC | 2 cut(s) | 1625, 2591 |
| Hpy188I | TCNGA | 9 cut(s) | 162, 316, 610, 820, 877, 889, 1839, 2007, 2647 |
| Hpy188III | TCNNGA | 8 cut(s) | 48, 187, 662, 717, 733, 852, 2111, 2398 |
| Hpy8I | GTNNAC | 2 cut(s) | 1625, 2591 |
| Hpy99I | CGWCG | 2 cut(s) | 54, 303 |
| HpyCH4III | ACNGT | 7 cut(s) | 478, 862, 973, 995, 1222, 1453, 2477 |
| HpyCH4IV | ACGT | 5 cut(s) | 298, 468, 1208, 1439, 2287 |
| HpyF3I | CTNAG | 8 cut(s) | 173, 419, 592, 663, 1314, 1545, 2045, 2428 |
| HpySE526I | ACGT | 5 cut(s) | 298, 468, 1208, 1439, 2287 |
| Hsp92I | GRCGYC | 1 cut(s) | 1154 |
| HspAI | GCGC | 3 cut(s) | 170, 1154, 1920 |
| KasI | GGCGCC | 1 cut(s) | 1153 |
| Kpn2I | TCCGGA | 1 cut(s) | 2397 |
| Ksp22I | TGATCA | 1 cut(s) | 2223 |
| LweI | GCATC | 5 cut(s) | 252, 338, 1632, 1667, 1936 |
| MaeI | CTAG | 7 cut(s) | 624, 1290, 1521, 1952, 2261, 2444, 2627 |
| MaeII | ACGT | 5 cut(s) | 298, 468, 1208, 1439, 2287 |
| MaeIII | GTNAC | 8 cut(s) | 106, 187, 572, 614, 827, 1099, 1222, 1527 |
| MbiI | CCGCTC | 1 cut(s) | 2269 |
| MfeI | CAATTG | 3 cut(s) | 454, 771, 2239 |
| MflI | RGATCY | 1 cut(s) | 1772 |
| Mly113I | GGCGCC | 1 cut(s) | 1154 |
| MlyI | GAGTC | 5 cut(s) | 94, 125, 1834, 2371, 2651 |
| MmeI | TCCRAC | 3 cut(s) | 14, 390, 451 |
| Mph1103I | ATGCAT | 1 cut(s) | 2534 |
| MroI | TCCGGA | 1 cut(s) | 2397 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2001, 2106 |
| MseI | TTAA | 9 cut(s) | 504, 740, 780, 1496, 2213, 2349, 2358, 2522, 2535 |
| MslI | CAYNNNNRTG | 2 cut(s) | 493, 2537 |
| MspA1I | CMGCKG | 2 cut(s) | 247, 1910 |
| MspI | CCGG | 2 cut(s) | 1646, 2398 |
| MspR9I | CCNGG | 2 cut(s) | 347, 1605 |
| MunI | CAATTG | 3 cut(s) | 454, 771, 2239 |
| Mva1269I | GAATGC | 1 cut(s) | 454 |
| MvaI | CCWGG | 2 cut(s) | 347, 1605 |
| MvnI | CGCG | 1 cut(s) | 570 |
| NarI | GGCGCC | 1 cut(s) | 1154 |
| NcoI | CCATGG | 2 cut(s) | 1596, 1716 |
| NheI | GCTAGC | 1 cut(s) | 2443 |
| NlaIV | GGNNCC | 9 cut(s) | 461, 475, 682, 814, 936, 1155, 1602, 2256, 2500 |
| NmuCI | GTSAC | 3 cut(s) | 106, 187, 1527 |
| NsiI | ATGCAT | 1 cut(s) | 2534 |
| NspI | RCATGY | 2 cut(s) | 222, 2614 |
| OliI | CACNNNNGTG | 1 cut(s) | 493 |
| PaqCI | CACCTGC | 3 cut(s) | 1294, 1525, 1916 |
| PceI | AGGCCT | 1 cut(s) | 1726 |
| PciI | ACATGT | 1 cut(s) | 218 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 474 |
| PctI | GAATGC | 1 cut(s) | 454 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2001, 2106 |
| PfeI | GAWTC | 4 cut(s) | 383, 588, 605, 2157 |
| PleI | GAGTC | 5 cut(s) | 93, 125, 1834, 2370, 2650 |
| PluTI | GGCGCC | 1 cut(s) | 1157 |
| PpsI | GAGTC | 5 cut(s) | 93, 125, 1834, 2370, 2650 |
| PpuMI | RGGWCCY | 1 cut(s) | 934 |
| PscI | ACATGT | 1 cut(s) | 218 |
| PsiI | TTATAA | 1 cut(s) | 977 |
| Psp1406I | AACGTT | 1 cut(s) | 2287 |
| Psp5II | RGGWCCY | 1 cut(s) | 934 |
| Psp6I | CCWGG | 2 cut(s) | 345, 1603 |
| PspEI | GGTNACC | 1 cut(s) | 1527 |
| PspFI | CCCAGC | 1 cut(s) | 1910 |
| PspGI | CCWGG | 2 cut(s) | 345, 1603 |
| PspN4I | GGNNCC | 9 cut(s) | 461, 475, 682, 814, 936, 1155, 1602, 2256, 2500 |
| PspPI | GGNCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| PspPPI | RGGWCCY | 1 cut(s) | 934 |
| PstI | CTGCAG | 1 cut(s) | 563 |
| PstNI | CAGNNNCTG | 4 cut(s) | 993, 1025, 1286, 1517 |
| PsuI | RGATCY | 1 cut(s) | 1772 |
| PvuII | CAGCTG | 2 cut(s) | 247, 1910 |
| RsaI | GTAC | 3 cut(s) | 297, 1422, 1551 |
| RsaNI | GTAC | 3 cut(s) | 296, 1421, 1550 |
| RseI | CAYNNNNRTG | 2 cut(s) | 493, 2537 |
| SaqAI | TTAA | 9 cut(s) | 504, 740, 780, 1496, 2213, 2349, 2358, 2522, 2535 |
| Sau96I | GGNCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| SchI | GAGTC | 5 cut(s) | 94, 125, 1834, 2371, 2651 |
| ScrFI | CCNGG | 2 cut(s) | 347, 1605 |
| SfaNI | GCATC | 5 cut(s) | 252, 338, 1632, 1667, 1936 |
| SfcI | CTRYAG | 2 cut(s) | 333, 559 |
| SfoI | GGCGCC | 1 cut(s) | 1155 |
| SinI | GGWCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 493, 2537 |
| SmlI | CTYRAG | 2 cut(s) | 491, 1844 |
| SmoI | CTYRAG | 2 cut(s) | 491, 1844 |
| SseBI | AGGCCT | 1 cut(s) | 1726 |
| SspDI | GGCGCC | 1 cut(s) | 1153 |
| SspI | AATATT | 1 cut(s) | 2012 |
| SspMI | CTAG | 7 cut(s) | 624, 1290, 1521, 1952, 2261, 2444, 2627 |
| StuI | AGGCCT | 1 cut(s) | 1726 |
| StyD4I | CCNGG | 2 cut(s) | 345, 1603 |
| StyI | CCWWGG | 3 cut(s) | 1596, 1716, 2260 |
| TaaI | ACNGT | 7 cut(s) | 478, 862, 973, 995, 1222, 1453, 2477 |
| TaiI | ACGT | 5 cut(s) | 301, 471, 1211, 1442, 2290 |
| TaqI | TCGA | 3 cut(s) | 49, 95, 704 |
| TauI | GCSGC | 2 cut(s) | 1154, 1297 |
| TfiI | GAWTC | 4 cut(s) | 383, 588, 605, 2157 |
| Tru1I | TTAA | 9 cut(s) | 504, 740, 780, 1496, 2213, 2349, 2358, 2522, 2535 |
| Tru9I | TTAA | 9 cut(s) | 504, 740, 780, 1496, 2213, 2349, 2358, 2522, 2535 |
| TscAI | CASTG | 9 cut(s) | 372, 759, 1188, 1206, 1326, 1419, 1437, 2233, 2482 |
| TseFI | GTSAC | 3 cut(s) | 106, 187, 1527 |
| Tsp45I | GTSAC | 3 cut(s) | 106, 187, 1527 |
| TspDTI | ATGAA | 8 cut(s) | 335, 375, 822, 858, 1799, 2084, 2095, 2355 |
| TspRI | CASTG | 9 cut(s) | 372, 759, 1188, 1206, 1326, 1419, 1437, 2233, 2482 |
| VpaK11BI | GGWCC | 6 cut(s) | 20, 208, 460, 934, 1622, 2264 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 662 |
| XapI | RAATTY | 3 cut(s) | 151, 2102, 2354 |
| XceI | RCATGY | 2 cut(s) | 222, 2614 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 30 |
| XmaJI | CCTAGG | 1 cut(s) | 2260 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2001, 2106 |
| XspI | CTAG | 7 cut(s) | 624, 1290, 1521, 1952, 2261, 2444, 2627 |
| Zsp2I | ATGCAT | 1 cut(s) | 2534 |