Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Reverse (-)

66306788 .. 66316773

Gene Structure 9986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G040690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGATCATTTGAATGACCTTTCGTCATCTTTGAGCTTTGCGTCTTCTTATCTATCGAATGGATCAAGTGGTAACTATGTATCTACCTCGGCCAATTCTCAAAGTACAGAGCATTTGAGTCTGAGCAGACTCAGTGATAACCTGGAGAGGCTGTTGCTTGATGCTCAATATGACTATGGTGATGCGGACATTGTTGTTGAAGGGGTCGCGGTTGGTGTCAATCGGTGTATATTGGCTGCACGCAGTCAGTTTTTCCACGAGCTTTTTAAGAAGGGGAATGATGATTCGAAGAAGGAAGGTAAACCGCAGTATATGATGTCTGAATTGGTTCCTTTGGGTGTAGTTGGCTATGAAGCATTCAAGGTAGTCTTGAACTACTTGTACACTGGAAAACTTAAGCCACCGCCTCCAGAAGTATCAACTGTATCAACATGTGTTGATGATAATTGTGCCCATGATGCATGCGGCCCTGCTATTAATTACGCTGTGGAATTAATGTATGCTGCTGCCACTTTCCAGATGAAAGAACTTGTTCATGTTGTGCAGCGCCGGCTTACTAACTTTGTCGAGAAAGCTCTTGTTGAAGACGTGATTCCGATTCTTGTAGCCTCTTTCCACTGCAAACAGAGTCAGCTGTTTTCACACTGCATCCAGAGGGTAGCAAAGTCAGATCTTGACAATGTGGTTCTAGAAAAAGAGCTTCCTCATGAAGTTTTTGATAGTATCAAATCACTCCGTCTCGAATCTCAGCAAATGGATGAATCAAGTATGCTGGAAATGGAGCCGGGGGAGGAAAAGAGGCTTAAAAGCATCGGGAGAATTCACAAGGCATTAGACTCTGATGATGTTGAACTGGTTACTCTTCTTCTAAAAGAGTCTGATTCTATTTCATTAGATGGTGCTTATGCTCTCCACTATGCTGTTGCATACTGTGATCCAAAAATTGTTAAGGAGGTTCTTGGTCTACGTCTGGCGAATACCAATCTTCGAAATGCCCGAGGACATACTGTACTTCATGTGGCTGCAAGGCGTAAGGAACCCGCAGTCCTAGTTCCTCTTCTGAACAGCGGAGCCTCTGCCTTAGAAACTACATTAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGTGTCTAACAAAGACCGAATATGCATAGATCTTCTAGAGAGAGAGATGCGAAGAAATTCGATGGCTGTGGACATGTCAAACACATCACAGGTGATAGCTGATGATTTGAATGTGAGGCTGGACTATTTTGAAAACAGAGGTGATACTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

441

Amino Acids

48.98

Weight (kDa)

5.33

Isoelectric Point (pI)

37.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	56 - 145	2.4e-11	BTB/POZ domain
DUF3420	PF11900	224 - 275	5.8e-11	Domain of unknown function (DUF3420)
Ank_2	PF12796	275 - 359	1.4e-07	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	375 - 437	5.6e-21	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1149
AccI	GTMKAC	1 cut(s)	964
AccII	CGCG	1 cut(s)	209
AciI	CCGC	7 cut(s)	185, 209, 305, 404, 465, 1041, 1068
AclWI	GGATC	3 cut(s)	12, 70, 929
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	2 cut(s)	819, 1228
AfaI	GTAC	3 cut(s)	106, 383, 1011
AflII	CTTAAG	1 cut(s)	395
AflIII	ACRYGT	2 cut(s)	431, 1245
AgsI	TTSAA	8 cut(s)	13, 200, 361, 373, 584, 851, 1282, 1304
AhdI	GACNNNNNGTC	1 cut(s)	22
AjiI	CACGTC	1 cut(s)	589
AjnI	CCWGG	1 cut(s)	141
AloI	GAACNNNNNNTCC	2 cut(s)	1029, 1061
AluBI	AGCT	6 cut(s)	36, 262, 575, 634, 700, 1271
AluI	AGCT	6 cut(s)	36, 262, 575, 634, 700, 1271
Alw26I	GTCTC	1 cut(s)	743
AlwI	GGATC	3 cut(s)	12, 70, 929
Ama87I	CYCGRG	1 cut(s)	996
AoxI	GGCC	2 cut(s)	90, 466
ApeKI	GCWGC	5 cut(s)	236, 503, 506, 544, 1022
ApoI	RAATTY	2 cut(s)	819, 1228
AseI	ATTAAT	2 cut(s)	477, 494
Asp700I	GAANNNNTTC	3 cut(s)	327, 531, 1228
AspLEI	GCGC	1 cut(s)	549
AspS9I	GGNCC	1 cut(s)	467
AsuC2I	CCSGG	1 cut(s)	786
AsuHPI	GGTGA	3 cut(s)	191, 1276, 1325
AsuII	TTCGAA	2 cut(s)	287, 988
AvaI	CYCGRG	1 cut(s)	996
BaeGI	GKGCMC	1 cut(s)	454
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	2 cut(s)	36, 591
BbvI	GCAGC	5 cut(s)	223, 490, 493, 556, 1009
BccI	CCATC	3 cut(s)	890, 1091, 1228
BciT130I	CCWGG	1 cut(s)	143
BcnI	CCSGG	1 cut(s)	786
BcoDI	GTCTC	1 cut(s)	743
BfaI	CTAG	4 cut(s)	689, 1049, 1134, 1208
BfoI	RGCGCY	1 cut(s)	550
BfrI	CTTAAG	1 cut(s)	395
BglII	AGATCT	2 cut(s)	670, 1201
BisI	GCNGC	6 cut(s)	237, 466, 504, 507, 545, 1023
BlsI	GCNGC	6 cut(s)	238, 467, 505, 508, 546, 1024
Bme1390I	CCNGG	2 cut(s)	143, 786
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmeT110I	CYCGRG	1 cut(s)	996
BmgBI	CACGTC	1 cut(s)	589
BmgT120I	GGNCC	1 cut(s)	467
BmiI	GGNNCC	4 cut(s)	330, 783, 1038, 1072
BmrFI	CCNGG	2 cut(s)	143, 786
BmsI	GCATC	6 cut(s)	151, 172, 448, 657, 819, 1209
BpiI	GAAGAC	2 cut(s)	36, 591
BpmI	CTGGAG	2 cut(s)	164, 393
Bpu14I	TTCGAA	2 cut(s)	287, 988
BpuMI	CCSGG	1 cut(s)	786
BsaJI	CCNNGG	3 cut(s)	87, 785, 997
BsaXI	ACNNNNNCTCC	2 cut(s)	137, 167
Bse118I	RCCGGY	1 cut(s)	549
Bse1I	ACTGG	2 cut(s)	391, 858
BseBI	CCWGG	1 cut(s)	143
BseDI	CCNNGG	3 cut(s)	87, 785, 997
BseGI	GGATG	2 cut(s)	648, 763
BseMII	CTCAG	3 cut(s)	113, 145, 761
BseNI	ACTGG	2 cut(s)	391, 858
BseSI	GKGCMC	1 cut(s)	454
BseXI	GCAGC	5 cut(s)	223, 490, 493, 556, 1009
BsgI	GTGCAG	2 cut(s)	222, 563
Bsh1236I	CGCG	1 cut(s)	209
BshFI	GGCC	2 cut(s)	92, 468
BsiHKCI	CYCGRG	1 cut(s)	996
BsiSI	CCGG	3 cut(s)	550, 785, 1123
BsmAI	GTCTC	1 cut(s)	743
BsmBI	CGTCTC	1 cut(s)	743
BsmI	GAATGC	1 cut(s)	356
BsnI	GGCC	2 cut(s)	92, 468
BsoBI	CYCGRG	1 cut(s)	996
Bsp119I	TTCGAA	2 cut(s)	287, 988
Bsp1286I	GDGCHC	1 cut(s)	454
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	5 cut(s)	4, 62, 670, 934, 1201
BspACI	CCGC	7 cut(s)	185, 209, 305, 404, 465, 1041, 1068
BspANI	GGCC	2 cut(s)	92, 468
BspCNI	CTCAG	3 cut(s)	114, 144, 760
BspFNI	CGCG	1 cut(s)	209
BspHI	TCATGA	1 cut(s)	706
BspLI	GGNNCC	4 cut(s)	330, 783, 1038, 1072
BspPI	GGATC	3 cut(s)	12, 70, 929
BspT104I	TTCGAA	2 cut(s)	287, 988
BspTI	CTTAAG	1 cut(s)	395
BsrFI	RCCGGY	1 cut(s)	549
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	2 cut(s)	391, 858
BssAI	RCCGGY	1 cut(s)	549
BssECI	CCNNGG	3 cut(s)	87, 785, 997
BssMI	GATC	5 cut(s)	4, 62, 670, 934, 1201
BssSI	CACGAG	1 cut(s)	257
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	1 cut(s)	143
Bst4CI	ACNGT	3 cut(s)	424, 932, 1009
Bst6I	CTCTTC	2 cut(s)	867, 1062
BstAFI	CTTAAG	1 cut(s)	395
BstAUI	TGTACA	1 cut(s)	381
BstBI	TTCGAA	2 cut(s)	287, 988
BstC8I	GCNNGC	3 cut(s)	241, 463, 551
BstDEI	CTNAG	4 cut(s)	122, 131, 747, 1081
BstF5I	GGATG	2 cut(s)	648, 763
BstFNI	CGCG	1 cut(s)	209
BstH2I	RGCGCY	1 cut(s)	550
BstHHI	GCGC	1 cut(s)	549
BstKTI	GATC	5 cut(s)	7, 65, 673, 937, 1204
BstMAI	GTCTC	1 cut(s)	743
BstMBI	GATC	5 cut(s)	4, 62, 670, 934, 1201
BstMWI	GCNNNNNNNGC	2 cut(s)	458, 550
BstNI	CCWGG	1 cut(s)	143
BstNSI	RCATGY	3 cut(s)	435, 465, 1249
BstSCI	CCNGG	2 cut(s)	141, 784
BstSLI	GKGCMC	1 cut(s)	454
BstUI	CGCG	1 cut(s)	209
BstV1I	GCAGC	5 cut(s)	223, 490, 493, 556, 1009
BstV2I	GAAGAC	2 cut(s)	36, 591
BstX2I	RGATCY	2 cut(s)	670, 1201
BstYI	RGATCY	2 cut(s)	670, 1201
BsuRI	GGCC	2 cut(s)	92, 468
BtrI	CACGTC	1 cut(s)	589
BtsCI	GGATG	2 cut(s)	648, 763
BtsI	GCAGTG	2 cut(s)	616, 643
BtsIMutI	CAGTG	4 cut(s)	139, 384, 616, 643
Cac8I	GCNNGC	3 cut(s)	241, 463, 551
CciI	TCATGA	1 cut(s)	706
CfoI	GCGC	1 cut(s)	549
Cfr10I	RCCGGY	1 cut(s)	549
Cfr13I	GGNCC	1 cut(s)	467
CseI	GACGC	1 cut(s)	30
Csp6I	GTAC	3 cut(s)	105, 382, 1010
CviAII	CATG	7 cut(s)	432, 455, 462, 536, 707, 1016, 1246
CviQI	GTAC	3 cut(s)	105, 382, 1010
DdeI	CTNAG	4 cut(s)	122, 131, 747, 1081
DpnI	GATC	5 cut(s)	6, 64, 672, 936, 1203
DpnII	GATC	5 cut(s)	4, 62, 670, 934, 1201
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	2 cut(s)	867, 1062
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	2 cut(s)	867, 1062
Eco88I	CYCGRG	1 cut(s)	996
EcoRI	GAATTC	1 cut(s)	819
EcoRII	CCWGG	1 cut(s)	141
EcoT22I	ATGCAT	2 cut(s)	463, 1199
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	7 cut(s)	435, 458, 465, 539, 710, 1019, 1249
FalI	AAGNNNNNCTT	2 cut(s)	353, 385
FatI	CATG	7 cut(s)	431, 454, 461, 535, 706, 1015, 1245
FauI	CCCGC	1 cut(s)	1048
FblI	GTMKAC	1 cut(s)	964
Fnu4HI	GCNGC	6 cut(s)	237, 466, 504, 507, 545, 1023
FokI	GGATG	2 cut(s)	635, 770
Fsp4HI	GCNGC	6 cut(s)	237, 466, 504, 507, 545, 1023
FspBI	CTAG	4 cut(s)	689, 1049, 1134, 1208
GlaI	GCGC	1 cut(s)	548
GluI	GCNGC	6 cut(s)	237, 466, 504, 507, 545, 1023
GsuI	CTGGAG	2 cut(s)	164, 393
HaeII	RGCGCY	1 cut(s)	550
HaeIII	GGCC	2 cut(s)	92, 468
HapII	CCGG	3 cut(s)	550, 785, 1123
HgaI	GACGC	1 cut(s)	30
HhaI	GCGC	1 cut(s)	549
Hin1II	CATG	7 cut(s)	435, 458, 465, 539, 710, 1019, 1249
Hin6I	GCGC	1 cut(s)	547
HinP1I	GCGC	1 cut(s)	547
HincII	GTYRAC	1 cut(s)	1131
HindII	GTYRAC	1 cut(s)	1131
HpaII	CCGG	3 cut(s)	550, 785, 1123
HphI	GGTGA	3 cut(s)	191, 1276, 1325
Hpy166II	GTNNAC	5 cut(s)	302, 384, 965, 1131, 1243
Hpy188I	TCNGA	7 cut(s)	123, 322, 597, 670, 841, 880, 1062
Hpy8I	GTNNAC	5 cut(s)	302, 384, 965, 1131, 1243
HpyAV	CCTTC	4 cut(s)	194, 265, 286, 290
HpyCH4III	ACNGT	3 cut(s)	424, 932, 1009
HpyCH4IV	ACGT	2 cut(s)	588, 967
HpyCH4V	TGCA	9 cut(s)	239, 461, 544, 621, 648, 926, 1025, 1115, 1197
HpyF10VI	GCNNNNNNNGC	2 cut(s)	458, 550
HpyF3I	CTNAG	4 cut(s)	122, 131, 747, 1081
HpySE526I	ACGT	2 cut(s)	588, 967
Hsp92II	CATG	7 cut(s)	435, 458, 465, 539, 710, 1019, 1249
HspAI	GCGC	1 cut(s)	547
KroI	GCCGGC	1 cut(s)	549
KroNI	GCCGGC	1 cut(s)	551
Kzo9I	GATC	5 cut(s)	4, 62, 670, 934, 1201
LmnI	GCTCC	2 cut(s)	781, 1070
Lsp1109I	GCAGC	5 cut(s)	223, 490, 493, 556, 1009
LweI	GCATC	6 cut(s)	151, 172, 448, 657, 819, 1209
MaeI	CTAG	4 cut(s)	689, 1049, 1134, 1208
MaeII	ACGT	2 cut(s)	588, 967
MaeIII	GTNAC	2 cut(s)	71, 856
MalI	GATC	5 cut(s)	6, 64, 672, 936, 1203
MboI	GATC	5 cut(s)	4, 62, 670, 934, 1201
MboII	GAAGA	9 cut(s)	36, 301, 596, 854, 857, 977, 1049, 1196, 1236
MflI	RGATCY	2 cut(s)	670, 1201
MhlI	GDGCHC	1 cut(s)	454
MluCI	AATT	9 cut(s)	94, 323, 445, 478, 491, 819, 942, 1116, 1228
MlyI	GAGTC	5 cut(s)	123, 127, 637, 830, 884
Mph1103I	ATGCAT	2 cut(s)	463, 1199
MroNI	GCCGGC	1 cut(s)	549
MroXI	GAANNNNTTC	3 cut(s)	327, 531, 1228
MseI	TTAA	6 cut(s)	267, 396, 477, 494, 804, 948
MslI	CAYNNNNRTG	1 cut(s)	12
MspA1I	CMGCKG	2 cut(s)	634, 1068
MspCI	CTTAAG	1 cut(s)	395
MspI	CCGG	3 cut(s)	550, 785, 1123
MspR9I	CCNGG	2 cut(s)	143, 786
Mva1269I	GAATGC	1 cut(s)	356
MvaI	CCWGG	1 cut(s)	143
MvnI	CGCG	1 cut(s)	209
MwoI	GCNNNNNNNGC	2 cut(s)	458, 550
NaeI	GCCGGC	1 cut(s)	551
NciI	CCSGG	1 cut(s)	786
NdeII	GATC	5 cut(s)	4, 62, 670, 934, 1201
NgoMIV	GCCGGC	1 cut(s)	549
NlaIII	CATG	7 cut(s)	435, 458, 465, 539, 710, 1019, 1249
NlaIV	GGNNCC	4 cut(s)	330, 783, 1038, 1072
NmeAIII	GCCGAG	1 cut(s)	68
NsiI	ATGCAT	2 cut(s)	463, 1199
NspI	RCATGY	3 cut(s)	435, 465, 1249
NspV	TTCGAA	2 cut(s)	287, 988
PaeI	GCATGC	1 cut(s)	465
PagI	TCATGA	1 cut(s)	706
PciI	ACATGT	2 cut(s)	431, 1245
PcsI	WCGNNNNNNNCGW	1 cut(s)	994
PctI	GAATGC	1 cut(s)	356
PdiI	GCCGGC	1 cut(s)	551
PdmI	GAANNNNTTC	3 cut(s)	327, 531, 1228
PfeI	GAWTC	6 cut(s)	284, 592, 598, 743, 761, 881
PkrI	GCNGC	6 cut(s)	238, 467, 505, 508, 546, 1024
PleI	GAGTC	5 cut(s)	123, 126, 636, 830, 883
PpsI	GAGTC	5 cut(s)	123, 126, 636, 830, 883
PscI	ACATGT	2 cut(s)	431, 1245
PshBI	ATTAAT	2 cut(s)	477, 494
PsiI	TTATAA	1 cut(s)	1149
Psp6I	CCWGG	1 cut(s)	141
PspGI	CCWGG	1 cut(s)	141
PspN4I	GGNNCC	4 cut(s)	330, 783, 1038, 1072
PspPI	GGNCC	1 cut(s)	467
PsrI	GAACNNNNNNTAC	2 cut(s)	365, 397
PsuI	RGATCY	2 cut(s)	670, 1201
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	3 cut(s)	106, 383, 1011
RsaNI	GTAC	3 cut(s)	105, 382, 1010
RseI	CAYNNNNRTG	1 cut(s)	12
SaqAI	TTAA	6 cut(s)	267, 396, 477, 494, 804, 948
SatI	GCNGC	6 cut(s)	237, 466, 504, 507, 545, 1023
Sau3AI	GATC	5 cut(s)	4, 62, 670, 934, 1201
Sau96I	GGNCC	1 cut(s)	467
SchI	GAGTC	5 cut(s)	123, 127, 637, 830, 884
ScrFI	CCNGG	2 cut(s)	143, 786
SduI	GDGCHC	1 cut(s)	454
SfaNI	GCATC	6 cut(s)	151, 172, 448, 657, 819, 1209
SfuI	TTCGAA	2 cut(s)	287, 988
SmiMI	CAYNNNNRTG	1 cut(s)	12
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
SphI	GCATGC	1 cut(s)	465
Sse9I	AATT	9 cut(s)	94, 323, 445, 478, 491, 819, 942, 1116, 1228
SsiI	CCGC	7 cut(s)	185, 209, 305, 404, 465, 1041, 1068
SspMI	CTAG	4 cut(s)	689, 1049, 1134, 1208
StyD4I	CCNGG	2 cut(s)	141, 784
TaaI	ACNGT	3 cut(s)	424, 932, 1009
TaiI	ACGT	2 cut(s)	591, 970
TaqI	TCGA	6 cut(s)	56, 287, 567, 741, 988, 1232
TaqII	GACCGA	1 cut(s)	1203
TasI	AATT	9 cut(s)	94, 323, 445, 478, 491, 819, 942, 1116, 1228
TatI	WGTACW	3 cut(s)	104, 381, 1009
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	6 cut(s)	284, 592, 598, 743, 761, 881
Tru1I	TTAA	6 cut(s)	267, 396, 477, 494, 804, 948
Tru9I	TTAA	6 cut(s)	267, 396, 477, 494, 804, 948
TscAI	CASTG	4 cut(s)	139, 391, 623, 650
TseI	GCWGC	5 cut(s)	236, 503, 506, 544, 1022
TspDTI	ATGAA	7 cut(s)	366, 524, 536, 723, 774, 879, 1004
TspGWI	ACGGA	1 cut(s)	725
TspRI	CASTG	4 cut(s)	139, 391, 623, 650
Vha464I	CTTAAG	1 cut(s)	395
VspI	ATTAAT	2 cut(s)	477, 494
XapI	RAATTY	2 cut(s)	819, 1228
XbaI	TCTAGA	2 cut(s)	688, 1207
XceI	RCATGY	3 cut(s)	435, 465, 1249
XmiI	GTMKAC	1 cut(s)	964
XmnI	GAANNNNTTC	3 cut(s)	327, 531, 1228
XspI	CTAG	4 cut(s)	689, 1049, 1134, 1208
Zsp2I	ATGCAT	2 cut(s)	463, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.