Regulatory protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AciI | CCGC | 3 cut(s) | 196, 199, 314 |
| AcsI | RAATTY | 1 cut(s) | 716 |
| AfaI | GTAC | 1 cut(s) | 636 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 212 |
| AgsI | TTSAA | 1 cut(s) | 129 |
| AjnI | CCWGG | 2 cut(s) | 273, 525 |
| AluBI | AGCT | 3 cut(s) | 61, 325, 622 |
| AluI | AGCT | 3 cut(s) | 61, 325, 622 |
| Alw26I | GTCTC | 2 cut(s) | 344, 419 |
| Ama87I | CYCGRG | 2 cut(s) | 359, 569 |
| AoxI | GGCC | 1 cut(s) | 318 |
| ApoI | RAATTY | 1 cut(s) | 716 |
| AspLEI | GCGC | 2 cut(s) | 6, 725 |
| AsuC2I | CCSGG | 1 cut(s) | 679 |
| AsuNHI | GCTAGC | 1 cut(s) | 325 |
| AvaI | CYCGRG | 2 cut(s) | 359, 569 |
| BanII | GRGCYC | 1 cut(s) | 49 |
| BauI | CACGAG | 1 cut(s) | 48 |
| BbsI | GAAGAC | 1 cut(s) | 678 |
| BccI | CCATC | 5 cut(s) | 22, 65, 202, 382, 400 |
| BciT130I | CCWGG | 2 cut(s) | 275, 527 |
| BcnI | CCSGG | 1 cut(s) | 679 |
| BcoDI | GTCTC | 2 cut(s) | 344, 419 |
| BfaI | CTAG | 3 cut(s) | 182, 326, 459 |
| BisI | GCNGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 1 cut(s) | 198 |
| Bme1390I | CCNGG | 3 cut(s) | 275, 527, 679 |
| BmeT110I | CYCGRG | 2 cut(s) | 359, 569 |
| BmiI | GGNNCC | 1 cut(s) | 580 |
| BmrFI | CCNGG | 3 cut(s) | 275, 527, 679 |
| BmsI | GCATC | 1 cut(s) | 488 |
| BmtI | GCTAGC | 1 cut(s) | 329 |
| BpiI | GAAGAC | 1 cut(s) | 678 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 563, 595 |
| BpmI | CTGGAG | 2 cut(s) | 234, 296 |
| Bpu10I | CCTNAGC | 1 cut(s) | 369 |
| BpuEI | CTTGAG | 1 cut(s) | 376 |
| BpuMI | CCSGG | 1 cut(s) | 679 |
| BsaI | GGTCTC | 1 cut(s) | 419 |
| BsaJI | CCNNGG | 1 cut(s) | 330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 212 |
| Bse3DI | GCAATG | 2 cut(s) | 336, 511 |
| BseBI | CCWGG | 2 cut(s) | 275, 527 |
| BseDI | CCNNGG | 1 cut(s) | 330 |
| BseGI | GGATG | 1 cut(s) | 692 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 212 |
| BseMI | GCAATG | 2 cut(s) | 336, 511 |
| BseMII | CTCAG | 1 cut(s) | 654 |
| BseRI | GAGGAG | 3 cut(s) | 571, 619, 688 |
| BsgI | GTGCAG | 2 cut(s) | 239, 458 |
| BshFI | GGCC | 1 cut(s) | 320 |
| BsiHKCI | CYCGRG | 2 cut(s) | 359, 569 |
| BsiSI | CCGG | 3 cut(s) | 97, 576, 678 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 212 |
| BsmAI | GTCTC | 2 cut(s) | 344, 419 |
| BsmI | GAATGC | 1 cut(s) | 85 |
| BsnI | GGCC | 1 cut(s) | 320 |
| Bso31I | GGTCTC | 1 cut(s) | 419 |
| BsoBI | CYCGRG | 2 cut(s) | 359, 569 |
| Bsp1286I | GDGCHC | 1 cut(s) | 49 |
| Bsp143I | GATC | 1 cut(s) | 250 |
| Bsp19I | CCATGG | 1 cut(s) | 330 |
| BspACI | CCGC | 3 cut(s) | 196, 199, 314 |
| BspANI | GGCC | 1 cut(s) | 320 |
| BspCNI | CTCAG | 1 cut(s) | 655 |
| BspLI | GGNNCC | 1 cut(s) | 580 |
| BspOI | GCTAGC | 1 cut(s) | 329 |
| BspTNI | GGTCTC | 1 cut(s) | 419 |
| BsrDI | GCAATG | 2 cut(s) | 336, 511 |
| BssECI | CCNNGG | 1 cut(s) | 330 |
| BssMI | GATC | 1 cut(s) | 250 |
| BssSI | CACGAG | 1 cut(s) | 48 |
| BssT1I | CCWWGG | 1 cut(s) | 330 |
| Bst2BI | CACGAG | 1 cut(s) | 48 |
| Bst2UI | CCWGG | 2 cut(s) | 275, 527 |
| Bst4CI | ACNGT | 2 cut(s) | 436, 484 |
| BstC8I | GCNNGC | 1 cut(s) | 327 |
| BstDEI | CTNAG | 2 cut(s) | 369, 663 |
| BstDSI | CCRYGG | 1 cut(s) | 330 |
| BstF5I | GGATG | 1 cut(s) | 692 |
| BstHHI | GCGC | 2 cut(s) | 6, 725 |
| BstKTI | GATC | 1 cut(s) | 253 |
| BstMAI | GTCTC | 2 cut(s) | 344, 419 |
| BstMBI | GATC | 1 cut(s) | 250 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 326 |
| BstNI | CCWGG | 2 cut(s) | 275, 527 |
| BstSCI | CCNGG | 3 cut(s) | 273, 525, 677 |
| BstV2I | GAAGAC | 1 cut(s) | 678 |
| BsuRI | GGCC | 1 cut(s) | 320 |
| BtgI | CCRYGG | 1 cut(s) | 330 |
| BtsCI | GGATG | 1 cut(s) | 692 |
| BtsIMutI | CAGTG | 1 cut(s) | 441 |
| Cac8I | GCNNGC | 1 cut(s) | 327 |
| CfoI | GCGC | 2 cut(s) | 6, 725 |
| CseI | GACGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 635 |
| CviAII | CATG | 3 cut(s) | 259, 331, 616 |
| CviQI | GTAC | 1 cut(s) | 635 |
| DdeI | CTNAG | 2 cut(s) | 369, 663 |
| DpnI | GATC | 1 cut(s) | 252 |
| DpnII | GATC | 1 cut(s) | 250 |
| DraI | TTTAAA | 1 cut(s) | 420 |
| EciI | GGCGGA | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 1 cut(s) | 330 |
| Eco24I | GRGCYC | 1 cut(s) | 49 |
| Eco31I | GGTCTC | 1 cut(s) | 419 |
| Eco88I | CYCGRG | 2 cut(s) | 359, 569 |
| EcoRII | CCWGG | 2 cut(s) | 273, 525 |
| EcoT14I | CCWWGG | 1 cut(s) | 330 |
| EcoT22I | ATGCAT | 1 cut(s) | 173 |
| EcoT38I | GRGCYC | 1 cut(s) | 49 |
| ErhI | CCWWGG | 1 cut(s) | 330 |
| FaeI | CATG | 3 cut(s) | 262, 334, 619 |
| FaiI | YATR | 7 cut(s) | 169, 227, 260, 332, 345, 476, 617 |
| FatI | CATG | 3 cut(s) | 258, 330, 615 |
| Fnu4HI | GCNGC | 1 cut(s) | 197 |
| FokI | GGATG | 1 cut(s) | 679 |
| FriOI | GRGCYC | 1 cut(s) | 49 |
| Fsp4HI | GCNGC | 1 cut(s) | 197 |
| FspBI | CTAG | 3 cut(s) | 182, 326, 459 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 2 cut(s) | 5, 724 |
| GluI | GCNGC | 1 cut(s) | 197 |
| GsuI | CTGGAG | 2 cut(s) | 234, 296 |
| HaeIII | GGCC | 1 cut(s) | 320 |
| HapII | CCGG | 3 cut(s) | 97, 576, 678 |
| HgaI | GACGC | 1 cut(s) | 42 |
| HhaI | GCGC | 2 cut(s) | 6, 725 |
| Hin1II | CATG | 3 cut(s) | 262, 334, 619 |
| Hin6I | GCGC | 2 cut(s) | 4, 723 |
| HinP1I | GCGC | 2 cut(s) | 4, 723 |
| HincII | GTYRAC | 1 cut(s) | 105 |
| HindII | GTYRAC | 1 cut(s) | 105 |
| HinfI | GANTC | 4 cut(s) | 202, 400, 450, 572 |
| HpaII | CCGG | 3 cut(s) | 97, 576, 678 |
| Hpy166II | GTNNAC | 1 cut(s) | 105 |
| Hpy188I | TCNGA | 9 cut(s) | 58, 70, 78, 207, 405, 520, 586, 711, 732 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 554 |
| Hpy8I | GTNNAC | 1 cut(s) | 105 |
| Hpy99I | CGWCG | 1 cut(s) | 58 |
| HpyAV | CCTTC | 2 cut(s) | 560, 727 |
| HpyCH4III | ACNGT | 2 cut(s) | 436, 484 |
| HpyCH4V | TGCA | 3 cut(s) | 171, 256, 439 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 326 |
| HpyF3I | CTNAG | 2 cut(s) | 369, 663 |
| Hsp92II | CATG | 3 cut(s) | 262, 334, 619 |
| HspAI | GCGC | 2 cut(s) | 4, 723 |
| Kzo9I | GATC | 1 cut(s) | 250 |
| LmnI | GCTCC | 3 cut(s) | 58, 584, 619 |
| LweI | GCATC | 1 cut(s) | 488 |
| MaeI | CTAG | 3 cut(s) | 182, 326, 459 |
| MalI | GATC | 1 cut(s) | 252 |
| MboI | GATC | 1 cut(s) | 250 |
| MboII | GAAGA | 2 cut(s) | 222, 678 |
| MfeI | CAATTG | 1 cut(s) | 291 |
| MhlI | GDGCHC | 1 cut(s) | 49 |
| MluCI | AATT | 5 cut(s) | 18, 291, 557, 716, 743 |
| MlyI | GAGTC | 2 cut(s) | 444, 581 |
| MmeI | TCCRAC | 2 cut(s) | 36, 444 |
| Mph1103I | ATGCAT | 1 cut(s) | 173 |
| MseI | TTAA | 1 cut(s) | 419 |
| MspI | CCGG | 3 cut(s) | 97, 576, 678 |
| MspR9I | CCNGG | 3 cut(s) | 275, 527, 679 |
| MunI | CAATTG | 1 cut(s) | 291 |
| Mva1269I | GAATGC | 1 cut(s) | 85 |
| MvaI | CCWGG | 2 cut(s) | 275, 527 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 326 |
| NciI | CCSGG | 1 cut(s) | 679 |
| NcoI | CCATGG | 1 cut(s) | 330 |
| NdeII | GATC | 1 cut(s) | 250 |
| NheI | GCTAGC | 1 cut(s) | 325 |
| NlaIII | CATG | 3 cut(s) | 262, 334, 619 |
| NlaIV | GGNNCC | 1 cut(s) | 580 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| NsiI | ATGCAT | 1 cut(s) | 173 |
| PaeR7I | CTCGAG | 1 cut(s) | 569 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 707 |
| PctI | GAATGC | 1 cut(s) | 85 |
| PfeI | GAWTC | 2 cut(s) | 202, 400 |
| PfoI | TCCNGGA | 1 cut(s) | 525 |
| PkrI | GCNGC | 1 cut(s) | 198 |
| PleI | GAGTC | 2 cut(s) | 444, 580 |
| PpsI | GAGTC | 2 cut(s) | 444, 580 |
| Psp6I | CCWGG | 2 cut(s) | 273, 525 |
| PspGI | CCWGG | 2 cut(s) | 273, 525 |
| PspN4I | GGNNCC | 1 cut(s) | 580 |
| PspXI | VCTCGAGB | 1 cut(s) | 569 |
| RsaI | GTAC | 1 cut(s) | 636 |
| RsaNI | GTAC | 1 cut(s) | 635 |
| SaqAI | TTAA | 1 cut(s) | 419 |
| SatI | GCNGC | 1 cut(s) | 197 |
| Sau3AI | GATC | 1 cut(s) | 250 |
| SchI | GAGTC | 2 cut(s) | 444, 581 |
| ScrFI | CCNGG | 3 cut(s) | 275, 527, 679 |
| SduI | GDGCHC | 1 cut(s) | 49 |
| SetI | ASST | 9 cut(s) | 63, 104, 276, 327, 414, 464, 552, 624, 738 |
| SfaNI | GCATC | 1 cut(s) | 488 |
| Sfr274I | CTCGAG | 1 cut(s) | 569 |
| SlaI | CTCGAG | 1 cut(s) | 569 |
| SmiI | ATTTAAAT | 1 cut(s) | 420 |
| SmlI | CTYRAG | 2 cut(s) | 391, 569 |
| SmoI | CTYRAG | 2 cut(s) | 391, 569 |
| Sse9I | AATT | 5 cut(s) | 18, 291, 557, 716, 743 |
| SsiI | CCGC | 3 cut(s) | 196, 199, 314 |
| SspMI | CTAG | 3 cut(s) | 182, 326, 459 |
| StyD4I | CCNGG | 3 cut(s) | 273, 525, 677 |
| StyI | CCWWGG | 1 cut(s) | 330 |
| SwaI | ATTTAAAT | 1 cut(s) | 420 |
| TaaI | ACNGT | 2 cut(s) | 436, 484 |
| TaqI | TCGA | 3 cut(s) | 383, 540, 570 |
| TaqII | GACCGA | 1 cut(s) | 177 |
| TasI | AATT | 5 cut(s) | 18, 291, 557, 716, 743 |
| TatI | WGTACW | 1 cut(s) | 634 |
| TauI | GCSGC | 1 cut(s) | 199 |
| TfiI | GAWTC | 2 cut(s) | 202, 400 |
| Tru1I | TTAA | 1 cut(s) | 419 |
| Tru9I | TTAA | 1 cut(s) | 419 |
| TscAI | CASTG | 1 cut(s) | 441 |
| TspDTI | ATGAA | 4 cut(s) | 491, 526, 604, 678 |
| TspGWI | ACGGA | 1 cut(s) | 476 |
| TspRI | CASTG | 1 cut(s) | 441 |
| XapI | RAATTY | 1 cut(s) | 716 |
| XbaI | TCTAGA | 1 cut(s) | 181 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 328 |
| XhoI | CTCGAG | 1 cut(s) | 569 |
| XspI | CTAG | 3 cut(s) | 182, 326, 459 |
| Zsp2I | ATGCAT | 1 cut(s) | 173 |