Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Reverse (-)

66958976 .. 66964304

Gene Structure 5329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020632

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGAGAATGTGAATGATCTGTCGGCTTCGTTGAGCTTTGCCTCCTCACATCTGTCAAATGGATTTAGTGGAAACCATGGATTTGCCTCAGCCAATGGTCAACCCGGCTTGACTACTGAGCATTTGAGTCTAAGCAAACTGAGTGACAATCTAGAGAGGTTGTTACTTGATCCTCAGTACGACTATAGTGATGCAGAGATTGTTGTTGAGGGCAACCCGGTTAGTGTTAATCGGTGTATATTAGCTGCCCGTAGTCAGTTTTTTCATGAGCTTTTTCAGAAGGGGAATGATAATTCGACGAAAGAAGGTAAACCGCAGTATCTGATGTCTGAATTGGTTCCTCACGGTGGGGTTGGCTACGAGGCCTTCAAGGTTTTCTTGAACTATTTGTACACCGGGAAGCTTAAGCCATCACCTCCAGAAGTGTCGACATGTGTTGAGGATGTTTGTGCTCATGATGCATGTGGCCCTGCTATTAACTATGCTGTGGAATTGATGTATGCTTCTTCCACGTTTCAAATGAAGGAGCTTGTTCAAGTTGTTCAGCGCCGTCTTTGGAACTTTGTTGACAAAGCTCTTGTTGAAGATGTGATCCCAATTCTTGTAGCTGCTTTCCACTGCCAACTGAGTCAGCTGCTCTCACACTGTGTTCAGAGGGTCTCAAGGTCAGATCTTGACAATGTGGCTCTAGAGAAAGAGCTTCCTCATGAAGTTTTAGATGATATAAAATCACTCCGTCTCGAATCTCAGGAAAAGGATGAATCAATTATGCTGGAGAAGGAACCGAGGGAGGATAAGAGGCTTAAAAGCATCAGGAGAATCCACAGGGCATTAGACTCTGATGATGTTGAACTTGTTACCCTTCTTCTGAATGAGTCTGATTCTATCACATTAGATGATGCTCACGCTCTCCACTATGCTGCTGCATACTGTGATCCTAAGATTGTTAAGGAGATTCTTGGTCTAGGGTTGGCAGATGTCAACCTTCGCAATGCACGAGAACATACTGTGCTTCATGTGGCAGCAAGGCGTAAGGAGCCATCAGTTATAGTTCATCTTCTGAACAAGGGAGCCTCTGCCTTAGAAACTACATCAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGAATCTAATAAAGACCGAATGTGCATAGATCTTCTAGAGAGAGAGATGCGAAGAAACTCGATATGTGGGAACTTGTCAAACACATCACAGATGGTAGCTGATGATTTTCACGTGAGCCTGAGCTATCTAGAAAATAGAGTGGCATTTGCACATTTGTTGTTTCCTACTGAAGCCAAGCTTGCTATGGAAATGGCAGATGCTGATTTAACATCAGGGTACACTGGATCAAGAACCTCAAATGGAAACTTACGTGAGGTTGATTTGAATGAAACACCCTCTGGAAGGGCCAAAAGACTCCAAGAAAAATTGCAAACCCTTATTAAAACAGTGGAAAAGGGTCGCCGCTTCTTCCCCCATTGCTCAGCAGTGCTTGATAAGTTCTTGGATGATCTTGGTATGGGTGATTACTTTCTTGAGAAAGGCACTCCTGAAGAGCAGAAAAACAAGAAGAGGCGTTTCTTGGAACTCAAGGCCGATGTACAGAAGGCATTTTGCAAGGACATGGCTGAAAAGGCTGAAAATAACCAGTCTGTTTTGACATCCTCATCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

576

Amino Acids

64.38

Weight (kDa)

5.59

Isoelectric Point (pI)

37.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	59 - 179	2.7e-12	BTB/POZ domain
DUF3420	PF11900	224 - 275	2.1e-10	Domain of unknown function (DUF3420)
Ank_2	PF12796	304 - 374	6.1e-07	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	375 - 574	2.7e-74	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1149
AccI	GTMKAC	1 cut(s)	428
AciI	CCGC	2 cut(s)	314, 1516
AclWI	GGATC	4 cut(s)	164, 586, 929, 1405
AcuI	CTGAAG	2 cut(s)	1362, 1623
AcvI	CACGTG	1 cut(s)	1285
AdeI	CACNNNGTG	1 cut(s)	647
AfaI	GTAC	4 cut(s)	179, 392, 1391, 1653
AfiI	CCNNNNNNNGG	2 cut(s)	347, 1455
AflII	CTTAAG	1 cut(s)	404
AflIII	ACRYGT	1 cut(s)	431
AgsI	TTSAA	7 cut(s)	370, 382, 518, 536, 584, 851, 1438
Alw21I	GWGCWC	1 cut(s)	454
Alw26I	GTCTC	2 cut(s)	664, 743
AlwI	GGATC	4 cut(s)	164, 586, 929, 1405
AlwNI	CAGNNNCTG	2 cut(s)	322, 1373
AoxI	GGCC	4 cut(s)	363, 466, 1458, 1644
ApeKI	GCWGC	6 cut(s)	245, 608, 634, 920, 923, 1022
Asp700I	GAANNNNTTC	1 cut(s)	336
AspLEI	GCGC	1 cut(s)	549
AspS9I	GGNCC	2 cut(s)	467, 1458
AsuC2I	CCSGG	3 cut(s)	105, 218, 397
AsuHPI	GGTGA	2 cut(s)	405, 1586
BaeI	ACNNNNGTAYC	2 cut(s)	302, 335
BauI	CACGAG	1 cut(s)	996
BbrPI	CACGTG	1 cut(s)	1285
Bbv12I	GWGCWC	1 cut(s)	454
BbvCI	CCTCAGC	1 cut(s)	88
BbvI	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BccI	CCATC	4 cut(s)	418, 1048, 1091, 1258
BceAI	ACGGC	1 cut(s)	534
BcnI	CCSGG	3 cut(s)	105, 218, 397
BcoDI	GTCTC	2 cut(s)	664, 743
BfaI	CTAG	6 cut(s)	152, 689, 965, 1134, 1208, 1301
BfmI	CTRYAG	1 cut(s)	184
BfoI	RGCGCY	1 cut(s)	550
BfrI	CTTAAG	1 cut(s)	404
BglII	AGATCT	2 cut(s)	670, 1201
BisI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1516
BlpI	GCTNAGC	1 cut(s)	1534
BlsI	GCNGC	7 cut(s)	247, 610, 636, 922, 925, 1024, 1517
Bme1390I	CCNGG	3 cut(s)	105, 218, 397
BmgT120I	GGNCC	2 cut(s)	467, 1458
BmiI	GGNNCC	4 cut(s)	339, 783, 1038, 1072
BmrFI	CCNGG	3 cut(s)	105, 218, 397
BmsI	GCATC	6 cut(s)	181, 448, 819, 889, 1209, 1360
BpmI	CTGGAG	2 cut(s)	402, 794
Bpu10I	CCTNAGC	2 cut(s)	88, 1292
Bpu1102I	GCTNAGC	1 cut(s)	1534
BpuEI	CTTGAG	3 cut(s)	646, 1607, 1625
BpuMI	CCSGG	3 cut(s)	105, 218, 397
BsaAI	YACGTR	2 cut(s)	1285, 1424
BsaI	GGTCTC	1 cut(s)	664
BsaJI	CCNNGG	2 cut(s)	76, 785
Bsc4I	CCNNNNNNNGG	2 cut(s)	347, 1455
Bse1I	ACTGG	2 cut(s)	1399, 1699
Bse3DI	GCAATG	2 cut(s)	997, 1528
BseDI	CCNNGG	2 cut(s)	76, 785
BseGI	GGATG	4 cut(s)	448, 763, 1564, 1712
BseLI	CCNNNNNNNGG	2 cut(s)	347, 1455
BseMI	GCAATG	2 cut(s)	997, 1528
BseMII	CTCAG	8 cut(s)	102, 108, 131, 188, 617, 761, 1283, 1548
BseNI	ACTGG	2 cut(s)	1399, 1699
BseRI	GAGGAG	1 cut(s)	34
BseXI	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BshFI	GGCC	4 cut(s)	365, 468, 1460, 1646
BsiHKAI	GWGCWC	1 cut(s)	454
BsiSI	CCGG	4 cut(s)	105, 218, 396, 1123
BslI	CCNNNNNNNGG	2 cut(s)	347, 1455
BsmAI	GTCTC	2 cut(s)	664, 743
BsmBI	CGTCTC	1 cut(s)	743
BsnI	GGCC	4 cut(s)	365, 468, 1460, 1646
Bso31I	GGTCTC	1 cut(s)	664
Bsp1286I	GDGCHC	1 cut(s)	454
Bsp1407I	TGTACA	2 cut(s)	390, 1651
Bsp143I	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
Bsp1720I	GCTNAGC	1 cut(s)	1534
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	2 cut(s)	314, 1516
BspANI	GGCC	4 cut(s)	365, 468, 1460, 1646
BspCNI	CTCAG	8 cut(s)	101, 109, 132, 187, 618, 760, 1284, 1547
BspHI	TCATGA	3 cut(s)	265, 454, 706
BspLI	GGNNCC	4 cut(s)	339, 783, 1038, 1072
BspPI	GGATC	4 cut(s)	164, 586, 929, 1405
BspQI	GCTCTTC	1 cut(s)	1599
BspTI	CTTAAG	1 cut(s)	404
BspTNI	GGTCTC	1 cut(s)	664
BsrDI	GCAATG	2 cut(s)	997, 1528
BsrGI	TGTACA	2 cut(s)	390, 1651
BsrI	ACTGG	2 cut(s)	1399, 1699
BssECI	CCNNGG	2 cut(s)	76, 785
BssMI	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
BssSI	CACGAG	1 cut(s)	996
BssT1I	CCWWGG	1 cut(s)	76
Bst2BI	CACGAG	1 cut(s)	996
Bst4CI	ACNGT	5 cut(s)	347, 647, 932, 1009, 1501
Bst6I	CTCTTC	2 cut(s)	1599, 1616
BstAFI	CTTAAG	1 cut(s)	404
BstAUI	TGTACA	2 cut(s)	390, 1651
BstBAI	YACGTR	2 cut(s)	1285, 1424
BstC8I	GCNNGC	1 cut(s)	1353
BstDSI	CCRYGG	1 cut(s)	76
BstENI	CCTNNNNNAGG	1 cut(s)	1453
BstF5I	GGATG	4 cut(s)	448, 763, 1564, 1712
BstH2I	RGCGCY	1 cut(s)	550
BstHHI	GCGC	1 cut(s)	549
BstKTI	GATC	8 cut(s)	19, 172, 594, 673, 937, 1204, 1400, 1564
BstMAI	GTCTC	2 cut(s)	664, 743
BstMBI	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
BstMWI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1685
BstNSI	RCATGY	2 cut(s)	435, 465
BstSCI	CCNGG	3 cut(s)	103, 216, 395
BstSFI	CTRYAG	1 cut(s)	184
BstV1I	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
BstX2I	RGATCY	2 cut(s)	670, 1201
BstYI	RGATCY	2 cut(s)	670, 1201
BsuRI	GGCC	4 cut(s)	365, 468, 1460, 1646
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	4 cut(s)	448, 763, 1564, 1712
BtsI	GCAGTG	2 cut(s)	616, 1545
BtsIMutI	CAGTG	5 cut(s)	616, 643, 1392, 1506, 1545
Cac8I	GCNNGC	1 cut(s)	1353
CaiI	CAGNNNCTG	2 cut(s)	322, 1373
CciI	TCATGA	3 cut(s)	265, 454, 706
CfoI	GCGC	1 cut(s)	549
Cfr13I	GGNCC	2 cut(s)	467, 1458
Csp6I	GTAC	4 cut(s)	178, 391, 1390, 1652
CviAII	CATG	8 cut(s)	77, 266, 432, 455, 462, 707, 1016, 1675
CviQI	GTAC	4 cut(s)	178, 391, 1390, 1652
DpnI	GATC	8 cut(s)	18, 171, 593, 672, 936, 1203, 1399, 1563
DpnII	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
DraIII	CACNNNGTG	1 cut(s)	647
Eam1104I	CTCTTC	2 cut(s)	1599, 1616
EarI	CTCTTC	2 cut(s)	1599, 1616
Eco130I	CCWWGG	1 cut(s)	76
Eco147I	AGGCCT	1 cut(s)	365
Eco31I	GGTCTC	1 cut(s)	664
Eco57I	CTGAAG	2 cut(s)	1362, 1623
Eco72I	CACGTG	1 cut(s)	1285
EcoNI	CCTNNNNNAGG	1 cut(s)	1453
EcoT14I	CCWWGG	1 cut(s)	76
EcoT22I	ATGCAT	1 cut(s)	463
ErhI	CCWWGG	1 cut(s)	76
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	8 cut(s)	80, 269, 435, 458, 465, 710, 1019, 1678
FalI	AAGNNNNNCTT	4 cut(s)	362, 394, 1335, 1367
FatI	CATG	8 cut(s)	76, 265, 431, 454, 461, 706, 1015, 1674
FblI	GTMKAC	1 cut(s)	428
Fnu4HI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1516
FokI	GGATG	4 cut(s)	455, 770, 1571, 1699
Fsp4HI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1516
FspBI	CTAG	6 cut(s)	152, 689, 965, 1134, 1208, 1301
GlaI	GCGC	1 cut(s)	548
GluI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1516
GsuI	CTGGAG	2 cut(s)	402, 794
HaeII	RGCGCY	1 cut(s)	550
HaeIII	GGCC	4 cut(s)	365, 468, 1460, 1646
HapII	CCGG	4 cut(s)	105, 218, 396, 1123
HhaI	GCGC	1 cut(s)	549
Hin1II	CATG	8 cut(s)	80, 269, 435, 458, 465, 710, 1019, 1678
Hin6I	GCGC	1 cut(s)	547
HinP1I	GCGC	1 cut(s)	547
HincII	GTYRAC	5 cut(s)	101, 429, 568, 982, 1131
HindII	GTYRAC	5 cut(s)	101, 429, 568, 982, 1131
HindIII	AAGCTT	2 cut(s)	401, 1349
HpaII	CCGG	4 cut(s)	105, 218, 396, 1123
HphI	GGTGA	2 cut(s)	405, 1586
Hpy166II	GTNNAC	8 cut(s)	101, 311, 393, 429, 568, 982, 1131, 1392
Hpy8I	GTNNAC	8 cut(s)	101, 311, 393, 429, 568, 982, 1131, 1392
Hpy99I	CGWCG	1 cut(s)	301
HpyAV	CCTTC	9 cut(s)	274, 299, 376, 517, 772, 872, 995, 1449, 1651
HpyCH4III	ACNGT	5 cut(s)	347, 647, 932, 1009, 1501
HpyCH4IV	ACGT	3 cut(s)	512, 1284, 1423
HpyCH4V	TGCA	9 cut(s)	194, 461, 926, 995, 1115, 1197, 1322, 1483, 1668
HpyF10VI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1685
HpySE526I	ACGT	3 cut(s)	512, 1284, 1423
Hsp92II	CATG	8 cut(s)	80, 269, 435, 458, 465, 710, 1019, 1678
HspAI	GCGC	1 cut(s)	547
Kzo9I	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	3 cut(s)	526, 1036, 1070
Lsp1109I	GCAGC	6 cut(s)	232, 595, 621, 907, 910, 1034
LweI	GCATC	6 cut(s)	181, 448, 819, 889, 1209, 1360
MaeI	CTAG	6 cut(s)	152, 689, 965, 1134, 1208, 1301
MaeII	ACGT	3 cut(s)	512, 1284, 1423
MaeIII	GTNAC	3 cut(s)	143, 162, 856
MalI	GATC	8 cut(s)	18, 171, 593, 672, 936, 1203, 1399, 1563
MboI	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
MboII	GAAGA	9 cut(s)	498, 596, 857, 1049, 1196, 1236, 1513, 1616, 1633
MflI	RGATCY	2 cut(s)	670, 1201
MhlI	GDGCHC	1 cut(s)	454
MluCI	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1478, 1723
MlyI	GAGTC	5 cut(s)	136, 637, 830, 884, 1461
Mph1103I	ATGCAT	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	336
MseI	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1494
MspA1I	CMGCKG	1 cut(s)	634
MspCI	CTTAAG	1 cut(s)	404
MspI	CCGG	4 cut(s)	105, 218, 396, 1123
MspR9I	CCNGG	3 cut(s)	105, 218, 397
MwoI	GCNNNNNNNGC	4 cut(s)	458, 1036, 1352, 1685
NciI	CCSGG	3 cut(s)	105, 218, 397
NcoI	CCATGG	1 cut(s)	76
NdeII	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
NlaIII	CATG	8 cut(s)	80, 269, 435, 458, 465, 710, 1019, 1678
NlaIV	GGNNCC	4 cut(s)	339, 783, 1038, 1072
NmuCI	GTSAC	1 cut(s)	143
NsiI	ATGCAT	1 cut(s)	463
NspI	RCATGY	2 cut(s)	435, 465
PagI	TCATGA	3 cut(s)	265, 454, 706
PceI	AGGCCT	1 cut(s)	365
PciI	ACATGT	1 cut(s)	431
PciSI	GCTCTTC	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	1 cut(s)	994
PdmI	GAANNNNTTC	1 cut(s)	336
PfeI	GAWTC	6 cut(s)	743, 761, 819, 881, 955, 1175
PkrI	GCNGC	7 cut(s)	247, 610, 636, 922, 925, 1024, 1517
PleI	GAGTC	5 cut(s)	135, 636, 830, 883, 1461
PmaCI	CACGTG	1 cut(s)	1285
PmlI	CACGTG	1 cut(s)	1285
PpsI	GAGTC	5 cut(s)	135, 636, 830, 883, 1461
Ppu21I	YACGTR	2 cut(s)	1285, 1424
PscI	ACATGT	1 cut(s)	431
PsiI	TTATAA	1 cut(s)	1149
PspCI	CACGTG	1 cut(s)	1285
PspN4I	GGNNCC	4 cut(s)	339, 783, 1038, 1072
PspPI	GGNCC	2 cut(s)	467, 1458
PsrI	GAACNNNNNNTAC	2 cut(s)	374, 406
PstNI	CAGNNNCTG	2 cut(s)	322, 1373
PsuI	RGATCY	2 cut(s)	670, 1201
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	4 cut(s)	179, 392, 1391, 1653
RsaNI	GTAC	4 cut(s)	178, 391, 1390, 1652
SalI	GTCGAC	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1494
SatI	GCNGC	7 cut(s)	246, 609, 635, 921, 924, 1023, 1516
Sau3AI	GATC	8 cut(s)	16, 169, 591, 670, 934, 1201, 1397, 1561
Sau96I	GGNCC	2 cut(s)	467, 1458
SchI	GAGTC	5 cut(s)	136, 637, 830, 884, 1461
ScrFI	CCNGG	3 cut(s)	105, 218, 397
SduI	GDGCHC	1 cut(s)	454
SfaNI	GCATC	6 cut(s)	181, 448, 819, 889, 1209, 1360
SfcI	CTRYAG	1 cut(s)	184
SmlI	CTYRAG	4 cut(s)	404, 661, 1586, 1640
SmoI	CTYRAG	4 cut(s)	404, 661, 1586, 1640
Sse9I	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1478, 1723
SseBI	AGGCCT	1 cut(s)	365
SsiI	CCGC	2 cut(s)	314, 1516
SspMI	CTAG	6 cut(s)	152, 689, 965, 1134, 1208, 1301
StuI	AGGCCT	1 cut(s)	365
StyD4I	CCNGG	3 cut(s)	103, 216, 395
StyI	CCWWGG	1 cut(s)	76
TaaI	ACNGT	5 cut(s)	347, 647, 932, 1009, 1501
TaiI	ACGT	3 cut(s)	515, 1287, 1426
TaqI	TCGA	4 cut(s)	296, 428, 741, 1232
TaqII	GACCGA	1 cut(s)	1203
TasI	AATT	8 cut(s)	292, 332, 491, 597, 765, 1116, 1478, 1723
TatI	WGTACW	2 cut(s)	390, 1651
TauI	GCSGC	1 cut(s)	1518
TfiI	GAWTC	6 cut(s)	743, 761, 819, 881, 955, 1175
Tru1I	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1494
Tru9I	TTAA	7 cut(s)	228, 405, 477, 804, 948, 1379, 1494
TscAI	CASTG	5 cut(s)	623, 650, 1399, 1506, 1545
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	6 cut(s)	245, 608, 634, 920, 923, 1022
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	7 cut(s)	254, 536, 723, 774, 1004, 1043, 1455
TspGWI	ACGGA	1 cut(s)	725
TspRI	CASTG	5 cut(s)	623, 650, 1399, 1506, 1545
Vha464I	CTTAAG	1 cut(s)	404
XagI	CCTNNNNNAGG	1 cut(s)	1453
XbaI	TCTAGA	4 cut(s)	151, 688, 1207, 1300
XceI	RCATGY	2 cut(s)	435, 465
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XmiI	GTMKAC	1 cut(s)	428
XmnI	GAANNNNTTC	1 cut(s)	336
XspI	CTAG	6 cut(s)	152, 689, 965, 1134, 1208, 1301
Zsp2I	ATGCAT	1 cut(s)	463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.