Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000570

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG480700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGATCATTTGAATGACCTTTCTTCATCTTTGAGCTTTGCGTCTTCTTATCTATCGAATGGATCAAGTGGTAACTGTCTATCTGCCTCGGCCAATTCTCAAAGTACAGAGCATTTGAGTCTGAGCAGACTCAGTGATAACCTGGAGAGGCTGTTGCTTGATGCTCAATATGACTATAGTGATGCGGACATTGTTGTTGAGGGGGTCGCGGTTGGTGTCAATCGGTGTATATTGGCTGCACGCAGTCAGTTTTTCCACGAGCTTTTTAAGAAGGGGAATGATGATTCGAAGAAGGAAGGTAAACCGCAGTATATGATGTCTGAATTGGTTCCTTTCCGTGGAGTTGGCTATGAAGCATTCAAGGTAGTCTTGAACTACTTGTACACTGGAAAACTTAAGCCACCGCCTCCAGAAGTATCAACTGTATCAACATGTGTTGATGATAATTGTGCCCATGATGCATGCGGCCCTGCTATTAATTACGCTGTGGAATTAATGTATGCTGCTGCCACTTTCCAGATGAAAGAACTTGTTCATGTTGTGCAGCGCCGGCTTACTAACTTTGTCGAGAAAGCTCTTGTTGAAGACATGATCCCGATTCTTGTAGCCTCTTTCCACTGCAAACAGAGTCAGCTGCTTTCACACTGCATCCAGAGGGTAGCAAAGTCAGATCTTGACAATGTGGTTCTAGAAAAAGAGCTTCCTCATGAAGTTTTTGATATTATCAAATCACTCCGTCTCGAATCTCAGCAAATGGATGAATCAAGTATGGTGGAAATGGAGCCGGGGGAGGAAAAGAGGCTTAAAAGCATCAGGAGAATCCACAAGGCATTAGACTCTGATGATGTTGAACTGGTTACTCTTCTTCTAAAAGAGTCTGATTCTATTTCATTAGATGATGCTTATGCTCTCCACTATGCTGTTGCATACTGTGATCCAAAAATTGTTAAGGAGGTTCTTGGTCTACGTCTGGCGAATACCAATCTTCAAAATGCCCGAGGACATACTGTACTTCATGTGGCTGCAAGGCGTAAGGAACCCGCAGTCCTAGTTCCTCTTCTGAACAGCGGAGCCTCTGCCTTAGAAACTACATTAGATGGTCAAACTGCTGTTGCAATTTGCCGGAGGTTGACTAGACCAAAGGATTATAATGAGAACACAAAGCAGGGAGAGGTGTCTAACAAAGACCGAATATGCATAGATCTTCTAGAGAGAGAGATGCGAAGAAATTCGATGGCTGTGGACATGTCAAACACATCACAGGTGATAGCTGATGATTTGAATGTGAGGCTGGACTATTTTGAAAATAGAGTGGCATTTGCACGGTTGTTGTTTCCTGCGGAAGCCAAGCTTGCTATGGAAATGGCGGATCATCCAACATCAGAGTCTAGTGGGAACTTACGAGAGGTCGATTTGAATGAAACACCCTCTGTACGATCCGAAAGACTCCACGAAAAATTGCGAGCCCTAATTAAAACAGTGGATATGGGACGGCGCTTCTTCCCCCATTGCTCAGAAGTTCTTGATAAGTTTCTGGATGATGAGACGGACATGGCTGATTACTTCCTTGAAAAAGAACTCCTGAAGAGGAGAAAAACAAGAAGAGGATGCGCTTCATGGAACTTAAAGATGATATACATAAGGCATTTTGCAGGGATGTGGCTGAAAACCAGGGTCAGTTTTGACAGCCTCATCATCATGGATCCGGCTCCTCTAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009814 GO:0009816 GO:0009817 GO:0009966 GO:0009987 GO:0010498 GO:0010646 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023051 GO:0030162 GO:0030163 GO:0031406 GO:0031461 GO:0031625 GO:0032991 GO:0033293 GO:0035821 GO:0036094 GO:0042562 GO:0042742 GO:0043161 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043207 GO:0043632 GO:0044003 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052031 GO:0052173 GO:0052200 GO:0052255 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052558 GO:0052559 GO:0052564 GO:0052572 GO:0060255 GO:0065007 GO:0071704 GO:0075136 GO:0080090 GO:0080185 GO:0097159 GO:0098542 GO:1901149 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234 GO:2000022

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Ank_2 BTB DUF3420 NPR1_like_C

Protein Analysis

573

Amino Acids

64.65

Weight (kDa)

5.81

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	56 - 144	2.1e-12	BTB/POZ domain
DUF3420	PF11900	224 - 275	1.8e-10	Domain of unknown function (DUF3420)
Ank_2	PF12796	275 - 359	9.1e-07	Ankyrin repeats (3 copies)
NPR1_like_C	PF12313	375 - 535	2.1e-56	NPR1/NIM1 like defence protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45110 AT5G45110
fragaria_vesca	FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_3g11950 FvH4_6g38820 FvH4_6g38820 FvH4_6g38821 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830 FvH4_6g38830
malus_domestica	MD05G1256300.v1.1 MD05G1256400.v1.1 MD09G1146600.v1.1 MD10G1236700.v1.1 MD10G1236800.v1.1 MD17G1133300.v1.1
prunus_persica	Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.3G178800_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107500_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1 Prupe.4G107800_v2.0.a1
pyrus_communis	pycom05g23540 pycom05g23550 pycom05g23560 pycom05g23570 pycom09g06690 pycom10g19800 pycom17g12780
rosa_chinensis	RchiOBHm_Chr2g0152421 RchiOBHm_Chr2g0152431 RchiOBHm_Chr2g0152441 RchiOBHm_Chr5g0019531
rosa_laevigata	RLG00000020632 RLG00000020633 RLG00000032453
rosa_multiflora	Rmu_co8414461.1_g000001 Rmu_sc0002759.1_g000050 Rmu_sc0005366.1_g000015 Rmu_sc0005366.1_g000016 Rmu_sc0005366.1_g000017 Rmu_sc0005366.1_g000020 Rmu_sc0005366.1_g000022
rosa_roxburghii	Rroxscaffold_1G00058530 Rroxscaffold_2G00095720 Rroxscaffold_2G00095730 Rroxscaffold_2G00095740
rosa_rugosa	Rorug02G0432800 Rorug05G0051600
rosa_samantha	Rh2AG494300 Rh2AG494400 Rh2AG494500 Rh2BG506600 Rh2BG506700 Rh2CG480600 Rh2CG480700 Rh2DG517700 Rh2DG517800 Rh2DG517900 Rh5AG142400 Rh5BG140800 Rh5CG152900 Rh5DG141500
rosa_wichuraiana	Rw2G040670 Rw2G040680 Rw2G040690 Rw5G012600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1149
AccI	GTMKAC	1 cut(s)	964
AccII	CGCG	1 cut(s)	209
AciI	CCGC	9 cut(s)	185, 209, 305, 404, 465, 1041, 1068, 1340, 1367
AclWI	GGATC	8 cut(s)	12, 70, 586, 929, 1377, 1431, 1697, 1710
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	1 cut(s)	1228
AcuI	CTGAAG	1 cut(s)	1604
AfaI	GTAC	4 cut(s)	106, 383, 1011, 1434
AfiI	CCNNNNNNNGG	1 cut(s)	338
AflII	CTTAAG	1 cut(s)	395
AflIII	ACRYGT	2 cut(s)	431, 1245
AjnI	CCWGG	2 cut(s)	141, 1670
AloI	GAACNNNNNNTCC	2 cut(s)	1029, 1061
AluBI	AGCT	7 cut(s)	36, 262, 575, 634, 700, 1271, 1351
AluI	AGCT	7 cut(s)	36, 262, 575, 634, 700, 1271, 1351
Alw26I	GTCTC	2 cut(s)	743, 1538
AlwI	GGATC	8 cut(s)	12, 70, 586, 929, 1377, 1431, 1697, 1710
Ama87I	CYCGRG	1 cut(s)	996
AoxI	GGCC	2 cut(s)	90, 466
ApeKI	GCWGC	6 cut(s)	236, 503, 506, 544, 634, 1022
ApoI	RAATTY	1 cut(s)	1228
AseI	ATTAAT	2 cut(s)	477, 494
Asp700I	GAANNNNTTC	3 cut(s)	327, 531, 1228
AspLEI	GCGC	3 cut(s)	549, 1497, 1613
AspS9I	GGNCC	1 cut(s)	467
AsuC2I	CCSGG	1 cut(s)	786
AsuHPI	GGTGA	1 cut(s)	1276
AsuII	TTCGAA	1 cut(s)	287
AvaI	CYCGRG	1 cut(s)	996
BaeGI	GKGCMC	1 cut(s)	454
BamHI	GGATCC	1 cut(s)	1702
BanII	GRGCYC	1 cut(s)	1468
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	2 cut(s)	36, 591
BbvI	GCAGC	6 cut(s)	223, 490, 493, 556, 621, 1009
BccI	CCATC	2 cut(s)	1091, 1228
BceAI	ACGGC	1 cut(s)	1508
BciT130I	CCWGG	2 cut(s)	143, 1672
BcnI	CCSGG	1 cut(s)	786
BcoDI	GTCTC	2 cut(s)	743, 1538
BfaI	CTAG	5 cut(s)	689, 1049, 1134, 1208, 1389
BfmI	CTRYAG	1 cut(s)	175
BfoI	RGCGCY	2 cut(s)	550, 1498
BfrI	CTTAAG	1 cut(s)	395
BglII	AGATCT	2 cut(s)	670, 1201
BisI	GCNGC	7 cut(s)	237, 466, 504, 507, 545, 635, 1023
BlsI	GCNGC	7 cut(s)	238, 467, 505, 508, 546, 636, 1024
Bme1390I	CCNGG	3 cut(s)	143, 786, 1672
BmeT110I	CYCGRG	1 cut(s)	996
BmgT120I	GGNCC	1 cut(s)	467
BmiI	GGNNCC	6 cut(s)	330, 783, 1038, 1072, 1704, 1710
BmrFI	CCNGG	3 cut(s)	143, 786, 1672
BmsI	GCATC	8 cut(s)	151, 172, 448, 657, 819, 889, 1209, 1598
BpiI	GAAGAC	2 cut(s)	36, 591
BpmI	CTGGAG	2 cut(s)	164, 393
Bpu14I	TTCGAA	1 cut(s)	287
BpuMI	CCSGG	1 cut(s)	786
BsaJI	CCNNGG	5 cut(s)	87, 337, 785, 997, 1671
BsaXI	ACNNNNNCTCC	2 cut(s)	137, 167
Bsc4I	CCNNNNNNNGG	1 cut(s)	338
Bse118I	RCCGGY	1 cut(s)	549
Bse1I	ACTGG	2 cut(s)	391, 858
Bse3DI	GCAATG	1 cut(s)	1507
BseBI	CCWGG	2 cut(s)	143, 1672
BseDI	CCNNGG	5 cut(s)	87, 337, 785, 997, 1671
BseGI	GGATG	6 cut(s)	648, 763, 1372, 1543, 1613, 1662
BseLI	CCNNNNNNNGG	1 cut(s)	338
BseMI	GCAATG	1 cut(s)	1507
BseMII	CTCAG	4 cut(s)	113, 145, 761, 1527
BseNI	ACTGG	2 cut(s)	391, 858
BseRI	GAGGAG	2 cut(s)	1603, 1701
BseSI	GKGCMC	1 cut(s)	454
BseXI	GCAGC	6 cut(s)	223, 490, 493, 556, 621, 1009
BsgI	GTGCAG	2 cut(s)	222, 563
Bsh1236I	CGCG	1 cut(s)	209
BshFI	GGCC	2 cut(s)	92, 468
BsiHKCI	CYCGRG	1 cut(s)	996
BsiSI	CCGG	4 cut(s)	550, 785, 1123, 1706
BslFI	GGGAC	1 cut(s)	1503
BslI	CCNNNNNNNGG	1 cut(s)	338
BsmAI	GTCTC	2 cut(s)	743, 1538
BsmBI	CGTCTC	2 cut(s)	743, 1538
BsmFI	GGGAC	1 cut(s)	1503
BsmI	GAATGC	1 cut(s)	356
BsnI	GGCC	2 cut(s)	92, 468
BsoBI	CYCGRG	1 cut(s)	996
Bsp119I	TTCGAA	1 cut(s)	287
Bsp1286I	GDGCHC	2 cut(s)	454, 1468
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
BspACI	CCGC	9 cut(s)	185, 209, 305, 404, 465, 1041, 1068, 1340, 1367
BspANI	GGCC	2 cut(s)	92, 468
BspCNI	CTCAG	4 cut(s)	114, 144, 760, 1526
BspFNI	CGCG	1 cut(s)	209
BspHI	TCATGA	1 cut(s)	706
BspLI	GGNNCC	6 cut(s)	330, 783, 1038, 1072, 1704, 1710
BspPI	GGATC	8 cut(s)	12, 70, 586, 929, 1377, 1431, 1697, 1710
BspT104I	TTCGAA	1 cut(s)	287
BspTI	CTTAAG	1 cut(s)	395
BsrDI	GCAATG	1 cut(s)	1507
BsrFI	RCCGGY	1 cut(s)	549
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	2 cut(s)	391, 858
BssAI	RCCGGY	1 cut(s)	549
BssECI	CCNNGG	5 cut(s)	87, 337, 785, 997, 1671
BssMI	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
BssSI	CACGAG	1 cut(s)	257
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	2 cut(s)	143, 1672
Bst4CI	ACNGT	6 cut(s)	77, 424, 932, 1009, 1326, 1480
Bst6I	CTCTTC	4 cut(s)	867, 1062, 1580, 1597
BstAFI	CTTAAG	1 cut(s)	395
BstAUI	TGTACA	1 cut(s)	381
BstBI	TTCGAA	1 cut(s)	287
BstC8I	GCNNGC	5 cut(s)	241, 463, 551, 1353, 1464
BstDEI	CTNAG	5 cut(s)	122, 131, 747, 1081, 1513
BstDSI	CCRYGG	1 cut(s)	337
BstF5I	GGATG	6 cut(s)	648, 763, 1372, 1543, 1613, 1662
BstFNI	CGCG	1 cut(s)	209
BstH2I	RGCGCY	2 cut(s)	550, 1498
BstHHI	GCGC	3 cut(s)	549, 1497, 1613
BstKTI	GATC	9 cut(s)	7, 65, 594, 673, 937, 1204, 1372, 1439, 1705
BstMAI	GTCTC	2 cut(s)	743, 1538
BstMBI	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
BstMWI	GCNNNNNNNGC	3 cut(s)	458, 550, 1352
BstNI	CCWGG	2 cut(s)	143, 1672
BstNSI	RCATGY	3 cut(s)	435, 465, 1249
BstSCI	CCNGG	3 cut(s)	141, 784, 1670
BstSFI	CTRYAG	1 cut(s)	175
BstSLI	GKGCMC	1 cut(s)	454
BstUI	CGCG	1 cut(s)	209
BstV1I	GCAGC	6 cut(s)	223, 490, 493, 556, 621, 1009
BstV2I	GAAGAC	2 cut(s)	36, 591
BstX2I	RGATCY	3 cut(s)	670, 1201, 1702
BstYI	RGATCY	3 cut(s)	670, 1201, 1702
BsuRI	GGCC	2 cut(s)	92, 468
BtgI	CCRYGG	1 cut(s)	337
BtsCI	GGATG	6 cut(s)	648, 763, 1372, 1543, 1613, 1662
BtsI	GCAGTG	2 cut(s)	616, 643
BtsIMutI	CAGTG	5 cut(s)	139, 384, 616, 643, 1485
Cac8I	GCNNGC	5 cut(s)	241, 463, 551, 1353, 1464
CciI	TCATGA	1 cut(s)	706
CfoI	GCGC	3 cut(s)	549, 1497, 1613
Cfr10I	RCCGGY	1 cut(s)	549
Cfr13I	GGNCC	1 cut(s)	467
CseI	GACGC	1 cut(s)	30
Csp6I	GTAC	4 cut(s)	105, 382, 1010, 1433
CspCI	CAANNNNNGTGG	2 cut(s)	753, 788
CviQI	GTAC	4 cut(s)	105, 382, 1010, 1433
DdeI	CTNAG	5 cut(s)	122, 131, 747, 1081, 1513
DpnI	GATC	9 cut(s)	6, 64, 593, 672, 936, 1203, 1371, 1438, 1704
DpnII	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	4 cut(s)	867, 1062, 1580, 1597
EarI	CTCTTC	4 cut(s)	867, 1062, 1580, 1597
EciI	GGCGGA	1 cut(s)	1382
Eco24I	GRGCYC	1 cut(s)	1468
Eco57I	CTGAAG	1 cut(s)	1604
Eco88I	CYCGRG	1 cut(s)	996
EcoRII	CCWGG	2 cut(s)	141, 1670
EcoT22I	ATGCAT	2 cut(s)	463, 1199
EcoT38I	GRGCYC	1 cut(s)	1468
Esp3I	CGTCTC	2 cut(s)	743, 1538
FalI	AAGNNNNNCTT	4 cut(s)	353, 385, 1335, 1367
FaqI	GGGAC	1 cut(s)	1503
FauI	CCCGC	1 cut(s)	1048
FblI	GTMKAC	1 cut(s)	964
Fnu4HI	GCNGC	7 cut(s)	237, 466, 504, 507, 545, 635, 1023
FokI	GGATG	6 cut(s)	635, 770, 1359, 1550, 1620, 1669
FriOI	GRGCYC	1 cut(s)	1468
Fsp4HI	GCNGC	7 cut(s)	237, 466, 504, 507, 545, 635, 1023
FspBI	CTAG	5 cut(s)	689, 1049, 1134, 1208, 1389
GlaI	GCGC	3 cut(s)	548, 1496, 1612
GluI	GCNGC	7 cut(s)	237, 466, 504, 507, 545, 635, 1023
GsuI	CTGGAG	2 cut(s)	164, 393
HaeII	RGCGCY	2 cut(s)	550, 1498
HaeIII	GGCC	2 cut(s)	92, 468
HapII	CCGG	4 cut(s)	550, 785, 1123, 1706
HgaI	GACGC	1 cut(s)	30
HhaI	GCGC	3 cut(s)	549, 1497, 1613
Hin6I	GCGC	3 cut(s)	547, 1495, 1611
HinP1I	GCGC	3 cut(s)	547, 1495, 1611
HincII	GTYRAC	1 cut(s)	1131
HindII	GTYRAC	1 cut(s)	1131
HindIII	AAGCTT	1 cut(s)	1349
HpaII	CCGG	4 cut(s)	550, 785, 1123, 1706
HphI	GGTGA	1 cut(s)	1276
Hpy166II	GTNNAC	5 cut(s)	302, 384, 965, 1131, 1243
Hpy188I	TCNGA	9 cut(s)	123, 322, 670, 841, 880, 1062, 1384, 1441, 1516
Hpy8I	GTNNAC	5 cut(s)	302, 384, 965, 1131, 1243
HpyAV	CCTTC	3 cut(s)	265, 286, 290
HpyCH4III	ACNGT	6 cut(s)	77, 424, 932, 1009, 1326, 1480
HpyCH4IV	ACGT	1 cut(s)	967
HpyF10VI	GCNNNNNNNGC	3 cut(s)	458, 550, 1352
HpyF3I	CTNAG	5 cut(s)	122, 131, 747, 1081, 1513
HpySE526I	ACGT	1 cut(s)	967
HspAI	GCGC	3 cut(s)	547, 1495, 1611
KroI	GCCGGC	1 cut(s)	549
KroNI	GCCGGC	1 cut(s)	551
Kzo9I	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
LmnI	GCTCC	3 cut(s)	781, 1070, 1714
Lsp1109I	GCAGC	6 cut(s)	223, 490, 493, 556, 621, 1009
LweI	GCATC	8 cut(s)	151, 172, 448, 657, 819, 889, 1209, 1598
MaeI	CTAG	5 cut(s)	689, 1049, 1134, 1208, 1389
MaeII	ACGT	1 cut(s)	967
MaeIII	GTNAC	2 cut(s)	71, 856
MalI	GATC	9 cut(s)	6, 64, 593, 672, 936, 1203, 1371, 1438, 1704
MboI	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
MflI	RGATCY	3 cut(s)	670, 1201, 1702
MhlI	GDGCHC	2 cut(s)	454, 1468
MlyI	GAGTC	7 cut(s)	123, 127, 637, 830, 884, 1394, 1440
MmeI	TCCRAC	1 cut(s)	1400
Mph1103I	ATGCAT	2 cut(s)	463, 1199
MroNI	GCCGGC	1 cut(s)	549
MroXI	GAANNNNTTC	3 cut(s)	327, 531, 1228
MseI	TTAA	8 cut(s)	267, 396, 477, 494, 804, 948, 1473, 1625
MslI	CAYNNNNRTG	2 cut(s)	12, 1697
MspA1I	CMGCKG	2 cut(s)	634, 1068
MspCI	CTTAAG	1 cut(s)	395
MspI	CCGG	4 cut(s)	550, 785, 1123, 1706
MspR9I	CCNGG	3 cut(s)	143, 786, 1672
Mva1269I	GAATGC	1 cut(s)	356
MvaI	CCWGG	2 cut(s)	143, 1672
MvnI	CGCG	1 cut(s)	209
MwoI	GCNNNNNNNGC	3 cut(s)	458, 550, 1352
NaeI	GCCGGC	1 cut(s)	551
NciI	CCSGG	1 cut(s)	786
NdeII	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
NgoMIV	GCCGGC	1 cut(s)	549
NlaIV	GGNNCC	6 cut(s)	330, 783, 1038, 1072, 1704, 1710
NmeAIII	GCCGAG	1 cut(s)	68
NsiI	ATGCAT	2 cut(s)	463, 1199
NspI	RCATGY	3 cut(s)	435, 465, 1249
NspV	TTCGAA	1 cut(s)	287
PaeI	GCATGC	1 cut(s)	465
PagI	TCATGA	1 cut(s)	706
PciI	ACATGT	2 cut(s)	431, 1245
PctI	GAATGC	1 cut(s)	356
PdiI	GCCGGC	1 cut(s)	551
PdmI	GAANNNNTTC	3 cut(s)	327, 531, 1228
PfeI	GAWTC	6 cut(s)	284, 598, 743, 761, 819, 881
PkrI	GCNGC	7 cut(s)	238, 467, 505, 508, 546, 636, 1024
PleI	GAGTC	7 cut(s)	123, 126, 636, 830, 883, 1393, 1440
PpsI	GAGTC	7 cut(s)	123, 126, 636, 830, 883, 1393, 1440
PscI	ACATGT	2 cut(s)	431, 1245
PshBI	ATTAAT	2 cut(s)	477, 494
PsiI	TTATAA	1 cut(s)	1149
Psp6I	CCWGG	2 cut(s)	141, 1670
PspGI	CCWGG	2 cut(s)	141, 1670
PspN4I	GGNNCC	6 cut(s)	330, 783, 1038, 1072, 1704, 1710
PspPI	GGNCC	1 cut(s)	467
PsrI	GAACNNNNNNTAC	2 cut(s)	365, 397
PsuI	RGATCY	3 cut(s)	670, 1201, 1702
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	4 cut(s)	106, 383, 1011, 1434
RsaNI	GTAC	4 cut(s)	105, 382, 1010, 1433
RseI	CAYNNNNRTG	2 cut(s)	12, 1697
SaqAI	TTAA	8 cut(s)	267, 396, 477, 494, 804, 948, 1473, 1625
SatI	GCNGC	7 cut(s)	237, 466, 504, 507, 545, 635, 1023
Sau3AI	GATC	9 cut(s)	4, 62, 591, 670, 934, 1201, 1369, 1436, 1702
Sau96I	GGNCC	1 cut(s)	467
SchI	GAGTC	7 cut(s)	123, 127, 637, 830, 884, 1394, 1440
ScrFI	CCNGG	3 cut(s)	143, 786, 1672
SduI	GDGCHC	2 cut(s)	454, 1468
SfaNI	GCATC	8 cut(s)	151, 172, 448, 657, 819, 889, 1209, 1598
SfcI	CTRYAG	1 cut(s)	175
SfuI	TTCGAA	1 cut(s)	287
SmiMI	CAYNNNNRTG	2 cut(s)	12, 1697
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
SphI	GCATGC	1 cut(s)	465
SsiI	CCGC	9 cut(s)	185, 209, 305, 404, 465, 1041, 1068, 1340, 1367
SspMI	CTAG	5 cut(s)	689, 1049, 1134, 1208, 1389
StyD4I	CCNGG	3 cut(s)	141, 784, 1670
TaaI	ACNGT	6 cut(s)	77, 424, 932, 1009, 1326, 1480
TaiI	ACGT	1 cut(s)	970
TaqI	TCGA	6 cut(s)	56, 287, 567, 741, 1232, 1410
TaqII	GACCGA	1 cut(s)	1203
TatI	WGTACW	3 cut(s)	104, 381, 1009
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	6 cut(s)	284, 598, 743, 761, 819, 881
Tru1I	TTAA	8 cut(s)	267, 396, 477, 494, 804, 948, 1473, 1625
Tru9I	TTAA	8 cut(s)	267, 396, 477, 494, 804, 948, 1473, 1625
TscAI	CASTG	5 cut(s)	139, 391, 623, 650, 1485
TseI	GCWGC	6 cut(s)	236, 503, 506, 544, 634, 1022
TspGWI	ACGGA	3 cut(s)	326, 725, 1562
TspRI	CASTG	5 cut(s)	139, 391, 623, 650, 1485
Vha464I	CTTAAG	1 cut(s)	395
VspI	ATTAAT	2 cut(s)	477, 494
XapI	RAATTY	1 cut(s)	1228
XbaI	TCTAGA	2 cut(s)	688, 1207
XceI	RCATGY	3 cut(s)	435, 465, 1249
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XmiI	GTMKAC	1 cut(s)	964
XmnI	GAANNNNTTC	3 cut(s)	327, 531, 1228
XspI	CTAG	5 cut(s)	689, 1049, 1134, 1208, 1389
Zsp2I	ATGCAT	2 cut(s)	463, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.