AT5G50320

Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
20480626 .. 20484945
4320 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G50320.1

Sequence Viewer

Length: 1698 bp
ATGGCGACGGCGGTAGTGATGAACGGCGAGCTGAAAAAGCAACCTCGGCCAGGTAAAGGCGGCTATCAGGGCCGTGGATTAACTGAAGAAGAAGCTCGAGTTCGCGCCATATCGGAGATTGTTAGCACCATGATTGAGCGTTCACACCGCAACGAGAATGTTGACCTAAACGCAATTAAAACCGCCGCTTGCCGGAAATACGGCCTAGCACGTGCGCCTAAGCTCGTGGAGATGATTGCTGCGCTTCCTGATTCAGAGAGAGAGACTCTTCTCCCGAAGCTCCGTGCCAAACCGGTTCGAACAGCTTCAGGGATCGCCGTTGTGGCGGTTATGTCGAAGCCTCATAGGTGCCCGCATATAGCTACGACGGGGAATATATGCGTTTATTGTCCCGGTGGACCTGACTCTGACTTTGAGTATAGTACTCAGTCTTACACTGGATATGAGCCTACCAGCATGCGAGCTATTCGAGCCAGGTACAATCCATATGTTCAGGCAAGAAGCAGGATAGATCAGCTGAAGCGGTTGGGTCACAGTGTAGATAAGGTTGAGTTCATTTTGATGGGAGGTACTTTCATGTCACTGCCTGCTGAGTATCGGGATTTCTTCATACGGAATCTTCATGATGCTTTATCAGGACACACTTCTGCCAACGTTGAAGAGGCAGTTGCTTACTCTGAACATAGTGCAACTAAATGCATTGGGATGACAATTGAAACGAGGCCAGATTACTGCCTTGGACCTCATTTACGACAAATGCTGATTTACGGTTGCACCCGGCTAGAGATAGGTGTCCAGAGCACATATGAAGATGTTGCCCGTGACACAAATAGAGGTCATACTGTTGCTGCTGTAGCTGACTGCTTCTGCTTGGCTAAAGATGCTGGTTTCAAGGTGGTTGCACATATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACATGGAAAGTTTCAAGGAGTTTTTCGAGAGCCCATCTTTTAGAGCAGATGGGTTAAAAATATATCCCACCCTTGTGATCCGTGGAACTGGACTTTATGAACTATGGAAAACTGGGAGGTACCGAAATTATCCACCTGAGCAGCTTGTGGATATAGTTGCAAGGATTCTCTCCATGGTACCTCCATGGACACGTGTATATAGAGTTCAGCGTGATATTCCTATGCCTCTGGTTACGTCAGGGGTAGAAAAAGGAAATCTTCGTGAACTGGCTCTAGCCAGAATGGATGACTTGGGCCTTAAATGCCGTGATGTCCGTACTCGTGAAGCTGGAATTCAGGACATTCATCATAAAATTAAGCCAGAACAAGTAGAGCTTGTGCGTCGTGATTACACTGCCAATGAAGGTTGGGAGACGTTCCTTTCTTATGAAGATACACGCCAGGACATTCTTGTTGGATTGCTACGTTTGCGAAAATGCGGGAAGAATGTAACGTGTCCAGAACTCATGGGAAAGTGTTCTGTTGTCCGTGAGCTTCATGTATACGGAACAGCTGTACCAGTTCATGGTCGAGATGCTGATAAGTTGCAACATCAGGGCTATGGTACACTTCTGATGGAAGAAGCAGAGAGGATTGCTAGAAGAGAACATCGATCTAACAAAATCGGTGTGATTTCTGGTGTAGGAACCAGACATTACTACAGAAAGTTGGGTTATGAATTGGAAGGTCCTTACATGGTGAAGCATCTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0002097 GO:0002098 GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005719 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006399 GO:0006400 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0008283 GO:0009292 GO:0009294 GO:0009451 GO:0009653 GO:0009798 GO:0009889 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010928 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022603 GO:0023051 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033588 GO:0034212 GO:0034470 GO:0034641 GO:0034660 GO:0035265 GO:0036211 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044764 GO:0046483 GO:0048583 GO:0048589 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0051704 GO:0060255 GO:0061733 GO:0065001 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090708 GO:0099402 GO:1900618 GO:1901360 GO:1901371 GO:1901564 GO:1903506 GO:1905392 GO:1905421 GO:1905428 GO:2000024 GO:2000025 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

565

Amino Acids

63.69

Weight (kDa)

8.92

Isoelectric Point (pI)

34.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELP3_N PF23613 34 - 102 3.3e-26 ELP3 N-terminal domain
Radical_SAM PF04055 126 - 312 4.4e-12 Radical SAM superfamily
Radical_SAM_C PF16199 331 - 409 1.6e-22 Radical_SAM C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1062, 1120
AccB1I GGYRCC 3 cut(s) 348, 1062, 1120
AccB7I CCANNNNNTGG 1 cut(s) 1508
AccI GTMKAC 1 cut(s) 1485
AccII CGCG 1 cut(s) 105
AciI CCGC 9 cut(s) 11, 60, 148, 183, 186, 326, 353, 523, 1422
AclI AACGTT 1 cut(s) 654
AclWI GGATC 2 cut(s) 320, 1015
AcoI YGGCCR 1 cut(s) 47
AcsI RAATTY 1 cut(s) 1275
AcuI CTGAAG 3 cut(s) 105, 291, 539
AcvI CACGTG 2 cut(s) 212, 1136
AfaI GTAC 8 cut(s) 424, 479, 571, 1064, 1122, 1261, 1500, 1549
AfiI CCNNNNNNNGG 5 cut(s) 50, 56, 192, 929, 1508
AflIII ACRYGT 3 cut(s) 1133, 1135, 1436
AgeI ACCGGT 1 cut(s) 292
AgsI TTSAA 4 cut(s) 659, 716, 892, 958
AjnI CCWGG 3 cut(s) 49, 473, 1383
AleI CACNNNNGTG 1 cut(s) 1016
Alw21I GWGCWC 1 cut(s) 803
Alw26I GTCTC 3 cut(s) 257, 936, 1349
AlwI GGATC 2 cut(s) 320, 1015
Ama87I CYCGRG 1 cut(s) 96
AoxI GGCC 5 cut(s) 47, 70, 202, 722, 1237
ApeKI GCWGC 3 cut(s) 239, 848, 1084
ApoI RAATTY 1 cut(s) 1275
ArsI GACNNNNNNTTYG 2 cut(s) 395, 427
AsiGI ACCGGT 1 cut(s) 292
Asp700I GAANNNNTTC 2 cut(s) 304, 1459
Asp718I GGTACC 2 cut(s) 1062, 1120
AspLEI GCGC 3 cut(s) 107, 217, 244
AspS9I GGNCC 5 cut(s) 70, 398, 740, 1237, 1670
AsuC2I CCSGG 2 cut(s) 393, 778
AsuHPI GGTGA 1 cut(s) 1693
AsuII TTCGAA 1 cut(s) 298
AvaI CYCGRG 1 cut(s) 96
AvaII GGWCC 3 cut(s) 398, 740, 1670
BaeGI GKGCMC 1 cut(s) 353
BaeI ACNNNNGTAYC 2 cut(s) 1482, 1515
BanI GGYRCC 3 cut(s) 348, 1062, 1120
BanII GRGCYC 1 cut(s) 977
BauI CACGAG 2 cut(s) 224, 1263
BbrPI CACGTG 2 cut(s) 212, 1136
Bbv12I GWGCWC 1 cut(s) 803
BbvI GCAGC 3 cut(s) 226, 835, 1096
BccI CCATC 4 cut(s) 556, 985, 986, 1552
BceAI ACGGC 6 cut(s) 24, 40, 57, 217, 302, 1233
BciT130I CCWGG 3 cut(s) 51, 475, 1385
BcnI CCSGG 2 cut(s) 393, 778
BcoDI GTCTC 3 cut(s) 257, 936, 1349
BfaI CTAG 4 cut(s) 206, 782, 1217, 1581
BfmI CTRYAG 2 cut(s) 852, 1642
BglI GCCNNNNNGGC 1 cut(s) 323
BisI GCNGC 5 cut(s) 61, 186, 240, 849, 1085
BlsI GCNGC 5 cut(s) 62, 187, 241, 850, 1086
BmcAI AGTACT 1 cut(s) 424
Bme1390I CCNGG 5 cut(s) 51, 393, 475, 778, 1385
Bme18I GGWCC 3 cut(s) 398, 740, 1670
BmeT110I CYCGRG 1 cut(s) 96
BmgT120I GGNCC 5 cut(s) 70, 398, 740, 1237, 1670
BmiI GGNNCC 4 cut(s) 350, 1064, 1122, 1630
BmrFI CCNGG 5 cut(s) 51, 393, 475, 778, 1385
BmrI ACTGGG 1 cut(s) 1065
BmsI GCATC 4 cut(s) 616, 871, 900, 1507
BmuI ACTGGG 1 cut(s) 1065
BplI GAGNNNNNCTC 2 cut(s) 250, 282
Bpu10I CCTNAGC 2 cut(s) 219, 1080
Bpu14I TTCGAA 1 cut(s) 298
BpuMI CCSGG 2 cut(s) 393, 778
Bsa29I ATCGAT 1 cut(s) 1594
BsaAI YACGTR 2 cut(s) 212, 1136
BsaJI CCNNGG 6 cut(s) 44, 73, 736, 1024, 1116, 1127
BsaWI WCCGGW 1 cut(s) 292
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 56, 192, 929, 1508
Bse118I RCCGGY 1 cut(s) 292
Bse1I ACTGG 5 cut(s) 442, 1036, 1060, 1215, 1502
BseBI CCWGG 3 cut(s) 51, 475, 1385
BseCI ATCGAT 1 cut(s) 1594
BseDI CCNNGG 6 cut(s) 44, 73, 736, 1024, 1116, 1127
BseGI GGATG 2 cut(s) 711, 1234
BseLI CCNNNNNNNGG 5 cut(s) 50, 56, 192, 929, 1508
BseMII CTCAG 3 cut(s) 440, 582, 1071
BseNI ACTGG 5 cut(s) 442, 1036, 1060, 1215, 1502
BseSI GKGCMC 1 cut(s) 353
BseXI GCAGC 3 cut(s) 226, 835, 1096
Bsh1236I CGCG 1 cut(s) 105
BshFI GGCC 5 cut(s) 49, 72, 204, 724, 1239
BshNI GGYRCC 3 cut(s) 348, 1062, 1120
BshTI ACCGGT 1 cut(s) 292
BshVI ATCGAT 1 cut(s) 1594
BsiHKAI GWGCWC 1 cut(s) 803
BsiHKCI CYCGRG 1 cut(s) 96
BsiSI CCGG 4 cut(s) 193, 293, 393, 778
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 5 cut(s) 50, 56, 192, 929, 1508
BsmAI GTCTC 3 cut(s) 257, 936, 1349
BsmBI CGTCTC 1 cut(s) 1349
BsmFI GGGAC 1 cut(s) 375
BsnI GGCC 5 cut(s) 49, 72, 204, 724, 1239
BsoBI CYCGRG 1 cut(s) 96
Bsp119I TTCGAA 1 cut(s) 298
Bsp1286I GDGCHC 3 cut(s) 353, 803, 977
Bsp143I GATC 5 cut(s) 312, 511, 916, 1020, 1595
Bsp19I CCATGG 2 cut(s) 1116, 1127
BspACI CCGC 9 cut(s) 11, 60, 148, 183, 186, 326, 353, 523, 1422
BspANI GGCC 5 cut(s) 49, 72, 204, 724, 1239
BspCNI CTCAG 3 cut(s) 439, 583, 1072
BspDI ATCGAT 1 cut(s) 1594
BspFNI CGCG 1 cut(s) 105
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 4 cut(s) 350, 1064, 1122, 1630
BspPI GGATC 2 cut(s) 320, 1015
BspT104I TTCGAA 1 cut(s) 298
BspT107I GGYRCC 3 cut(s) 348, 1062, 1120
BsrFI RCCGGY 1 cut(s) 292
BsrI ACTGG 5 cut(s) 442, 1036, 1060, 1215, 1502
BssAI RCCGGY 1 cut(s) 292
BssECI CCNNGG 6 cut(s) 44, 73, 736, 1024, 1116, 1127
BssMI GATC 5 cut(s) 312, 511, 916, 1020, 1595
BssNAI GTATAC 1 cut(s) 1486
BssSI CACGAG 2 cut(s) 224, 1263
BssT1I CCWWGG 3 cut(s) 736, 1116, 1127
Bst1107I GTATAC 1 cut(s) 1486
Bst2BI CACGAG 2 cut(s) 224, 1263
Bst2UI CCWGG 3 cut(s) 51, 475, 1385
Bst4CI ACNGT 3 cut(s) 536, 770, 844
Bst6I CTCTTC 3 cut(s) 273, 654, 1579
BstBAI YACGTR 2 cut(s) 212, 1136
BstBI TTCGAA 1 cut(s) 298
BstC8I GCNNGC 6 cut(s) 29, 190, 353, 458, 462, 588
BstDEI CTNAG 4 cut(s) 219, 426, 591, 1080
BstDSI CCRYGG 4 cut(s) 73, 1024, 1116, 1127
BstENI CCTNNNNNAGG 1 cut(s) 48
BstF5I GGATG 2 cut(s) 711, 1234
BstFNI CGCG 1 cut(s) 105
BstHHI GCGC 3 cut(s) 107, 217, 244
BstKTI GATC 5 cut(s) 315, 514, 919, 1023, 1598
BstMAI GTCTC 3 cut(s) 257, 936, 1349
BstMBI GATC 5 cut(s) 312, 511, 916, 1020, 1595
BstMWI GCNNNNNNNGC 9 cut(s) 37, 46, 69, 323, 470, 854, 881, 1245, 1411
BstNI CCWGG 3 cut(s) 51, 475, 1385
BstNSI RCATGY 1 cut(s) 460
BstSCI CCNGG 5 cut(s) 49, 391, 473, 776, 1383
BstSFI CTRYAG 2 cut(s) 852, 1642
BstSLI GKGCMC 1 cut(s) 353
BstUI CGCG 1 cut(s) 105
BstV1I GCAGC 3 cut(s) 226, 835, 1096
BstZ17I GTATAC 1 cut(s) 1486
Bsu15I ATCGAT 1 cut(s) 1594
BsuRI GGCC 5 cut(s) 49, 72, 204, 724, 1239
BsuTUI ATCGAT 1 cut(s) 1594
BtgI CCRYGG 4 cut(s) 73, 1024, 1116, 1127
BtsCI GGATG 2 cut(s) 711, 1234
BtsI GCAGTG 2 cut(s) 581, 1335
BtsIMutI CAGTG 4 cut(s) 435, 541, 581, 1335
Cac8I GCNNGC 6 cut(s) 29, 190, 353, 458, 462, 588
CciI TCATGA 1 cut(s) 622
CfoI GCGC 3 cut(s) 107, 217, 244
Cfr10I RCCGGY 1 cut(s) 292
Cfr13I GGNCC 5 cut(s) 70, 398, 740, 1237, 1670
ClaI ATCGAT 1 cut(s) 1594
CseI GACGC 1 cut(s) 1313
Csp6I GTAC 8 cut(s) 423, 478, 570, 1063, 1121, 1260, 1499, 1548
CspAI ACCGGT 1 cut(s) 292
CviQI GTAC 8 cut(s) 423, 478, 570, 1063, 1121, 1260, 1499, 1548
DdeI CTNAG 4 cut(s) 219, 426, 591, 1080
DpnI GATC 5 cut(s) 314, 513, 918, 1022, 1597
DpnII GATC 5 cut(s) 312, 511, 916, 1020, 1595
EaeI YGGCCR 1 cut(s) 47
Eam1104I CTCTTC 3 cut(s) 273, 654, 1579
EarI CTCTTC 3 cut(s) 273, 654, 1579
Eco130I CCWWGG 3 cut(s) 736, 1116, 1127
Eco24I GRGCYC 1 cut(s) 977
Eco47I GGWCC 3 cut(s) 398, 740, 1670
Eco57I CTGAAG 3 cut(s) 105, 291, 539
Eco72I CACGTG 2 cut(s) 212, 1136
Eco88I CYCGRG 1 cut(s) 96
EcoNI CCTNNNNNAGG 1 cut(s) 48
EcoO109I RGGNCCY 1 cut(s) 1670
EcoRI GAATTC 1 cut(s) 1275
EcoRII CCWGG 3 cut(s) 49, 473, 1383
EcoT14I CCWWGG 3 cut(s) 736, 1116, 1127
EcoT22I ATGCAT 1 cut(s) 701
EcoT38I GRGCYC 1 cut(s) 977
ErhI CCWWGG 3 cut(s) 736, 1116, 1127
Esp3I CGTCTC 1 cut(s) 1349
FalI AAGNNNNNCTT 4 cut(s) 1185, 1217, 1302, 1334
FaqI GGGAC 1 cut(s) 375
FauI CCCGC 2 cut(s) 360, 1415
FauNDI CATATG 3 cut(s) 487, 805, 906
FblI GTMKAC 1 cut(s) 1485
Fnu4HI GCNGC 5 cut(s) 61, 186, 240, 849, 1085
FokI GGATG 2 cut(s) 718, 1241
FriOI GRGCYC 1 cut(s) 977
Fsp4HI GCNGC 5 cut(s) 61, 186, 240, 849, 1085
FspBI CTAG 4 cut(s) 206, 782, 1217, 1581
GlaI GCGC 3 cut(s) 106, 216, 243
GluI GCNGC 5 cut(s) 61, 186, 240, 849, 1085
HaeIII GGCC 5 cut(s) 49, 72, 204, 724, 1239
HapII CCGG 4 cut(s) 193, 293, 393, 778
HgaI GACGC 1 cut(s) 1313
HhaI GCGC 3 cut(s) 107, 217, 244
Hin6I GCGC 3 cut(s) 105, 215, 242
HinP1I GCGC 3 cut(s) 105, 215, 242
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 5 cut(s) 251, 265, 404, 616, 1108
HpaII CCGG 4 cut(s) 193, 293, 393, 778
HphI GGTGA 1 cut(s) 1693
Hpy166II GTNNAC 6 cut(s) 143, 163, 398, 1208, 1486, 1550
Hpy188I TCNGA 5 cut(s) 115, 256, 409, 679, 1557
Hpy8I GTNNAC 6 cut(s) 143, 163, 398, 1208, 1486, 1550
Hpy99I CGWCG 3 cut(s) 10, 370, 1329
HpyAV CCTTC 2 cut(s) 1340, 1661
HpyCH4III ACNGT 3 cut(s) 536, 770, 844
HpyCH4IV ACGT 7 cut(s) 211, 654, 1135, 1178, 1358, 1408, 1436
HpyCH4V TGCA 6 cut(s) 689, 699, 774, 902, 1103, 1531
HpyF10VI GCNNNNNNNGC 9 cut(s) 37, 46, 69, 323, 470, 854, 881, 1245, 1411
HpyF3I CTNAG 4 cut(s) 219, 426, 591, 1080
HpySE526I ACGT 7 cut(s) 211, 654, 1135, 1178, 1358, 1408, 1436
HspAI GCGC 3 cut(s) 105, 215, 242
KpnI GGTACC 2 cut(s) 1066, 1124
Kzo9I GATC 5 cut(s) 312, 511, 916, 1020, 1595
LmnI GCTCC 1 cut(s) 285
Lsp1109I GCAGC 3 cut(s) 226, 835, 1096
LweI GCATC 4 cut(s) 616, 871, 900, 1507
MaeI CTAG 4 cut(s) 206, 782, 1217, 1581
MaeII ACGT 7 cut(s) 211, 654, 1135, 1178, 1358, 1408, 1436
MaeIII GTNAC 5 cut(s) 530, 579, 821, 1174, 1432
MalI GATC 5 cut(s) 314, 513, 918, 1022, 1597
MboI GATC 5 cut(s) 312, 511, 916, 1020, 1595
MfeI CAATTG 1 cut(s) 711
MhlI GDGCHC 3 cut(s) 353, 803, 977
MluCI AATT 6 cut(s) 174, 711, 1069, 1275, 1296, 1661
MlyI GAGTC 2 cut(s) 259, 398
MmeI TCCRAC 1 cut(s) 1378
Mph1103I ATGCAT 1 cut(s) 701
MroXI GAANNNNTTC 2 cut(s) 304, 1459
MseI TTAA 5 cut(s) 80, 177, 998, 1242, 1299
MslI CAYNNNNRTG 3 cut(s) 560, 704, 1016
MspA1I CMGCKG 2 cut(s) 517, 1496
MspI CCGG 4 cut(s) 193, 293, 393, 778
MspR9I CCNGG 5 cut(s) 51, 393, 475, 778, 1385
MunI CAATTG 1 cut(s) 711
MvaI CCWGG 3 cut(s) 51, 475, 1385
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 9 cut(s) 37, 46, 69, 323, 470, 854, 881, 1245, 1411
NciI CCSGG 2 cut(s) 393, 778
NcoI CCATGG 2 cut(s) 1116, 1127
NdeI CATATG 3 cut(s) 487, 805, 906
NdeII GATC 5 cut(s) 312, 511, 916, 1020, 1595
NlaIV GGNNCC 4 cut(s) 350, 1064, 1122, 1630
NmeAIII GCCGAG 1 cut(s) 25
NmuCI GTSAC 3 cut(s) 530, 579, 821
NsiI ATGCAT 1 cut(s) 701
NspI RCATGY 1 cut(s) 460
NspV TTCGAA 1 cut(s) 298
OliI CACNNNNGTG 1 cut(s) 1016
PaeI GCATGC 1 cut(s) 460
PaeR7I CTCGAG 1 cut(s) 96
PagI TCATGA 1 cut(s) 622
PdmI GAANNNNTTC 2 cut(s) 304, 1459
PfeI GAWTC 3 cut(s) 251, 616, 1108
PflMI CCANNNNNTGG 1 cut(s) 1508
PinAI ACCGGT 1 cut(s) 292
PkrI GCNGC 5 cut(s) 62, 187, 241, 850, 1086
PleI GAGTC 2 cut(s) 259, 398
PmaCI CACGTG 2 cut(s) 212, 1136
PmlI CACGTG 2 cut(s) 212, 1136
PpsI GAGTC 2 cut(s) 259, 398
Ppu21I YACGTR 2 cut(s) 212, 1136
PpuMI RGGWCCY 1 cut(s) 1670
Psp1406I AACGTT 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 1670
Psp6I CCWGG 3 cut(s) 49, 473, 1383
PspCI CACGTG 2 cut(s) 212, 1136
PspGI CCWGG 3 cut(s) 49, 473, 1383
PspN4I GGNNCC 4 cut(s) 350, 1064, 1122, 1630
PspPI GGNCC 5 cut(s) 70, 398, 740, 1237, 1670
PspPPI RGGWCCY 1 cut(s) 1670
PspXI VCTCGAGB 1 cut(s) 96
PsrI GAACNNNNNNTAC 2 cut(s) 1131, 1163
PvuII CAGCTG 2 cut(s) 517, 1496
RsaI GTAC 8 cut(s) 424, 479, 571, 1064, 1122, 1261, 1500, 1549
RsaNI GTAC 8 cut(s) 423, 478, 570, 1063, 1121, 1260, 1499, 1548
RseI CAYNNNNRTG 3 cut(s) 560, 704, 1016
SaqAI TTAA 5 cut(s) 80, 177, 998, 1242, 1299
SatI GCNGC 5 cut(s) 61, 186, 240, 849, 1085
Sau3AI GATC 5 cut(s) 312, 511, 916, 1020, 1595
Sau96I GGNCC 5 cut(s) 70, 398, 740, 1237, 1670
ScaI AGTACT 1 cut(s) 424
SchI GAGTC 2 cut(s) 259, 398
ScrFI CCNGG 5 cut(s) 51, 393, 475, 778, 1385
SduI GDGCHC 3 cut(s) 353, 803, 977
SfaNI GCATC 4 cut(s) 616, 871, 900, 1507
SfcI CTRYAG 2 cut(s) 852, 1642
Sfr274I CTCGAG 1 cut(s) 96
SfuI TTCGAA 1 cut(s) 298
SinI GGWCC 3 cut(s) 398, 740, 1670
SlaI CTCGAG 1 cut(s) 96
SmiMI CAYNNNNRTG 3 cut(s) 560, 704, 1016
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SphI GCATGC 1 cut(s) 460
Sse9I AATT 6 cut(s) 174, 711, 1069, 1275, 1296, 1661
SsiI CCGC 9 cut(s) 11, 60, 148, 183, 186, 326, 353, 523, 1422
SspMI CTAG 4 cut(s) 206, 782, 1217, 1581
StyD4I CCNGG 5 cut(s) 49, 391, 473, 776, 1383
StyI CCWWGG 3 cut(s) 736, 1116, 1127
TaaI ACNGT 3 cut(s) 536, 770, 844
TaiI ACGT 7 cut(s) 214, 657, 1138, 1181, 1361, 1411, 1439
TaqI TCGA 7 cut(s) 97, 298, 335, 469, 969, 1513, 1594
TasI AATT 6 cut(s) 174, 711, 1069, 1275, 1296, 1661
TatI WGTACW 1 cut(s) 422
TauI GCSGC 2 cut(s) 63, 188
TfiI GAWTC 3 cut(s) 251, 616, 1108
Tru1I TTAA 5 cut(s) 80, 177, 998, 1242, 1299
Tru9I TTAA 5 cut(s) 80, 177, 998, 1242, 1299
TscAI CASTG 4 cut(s) 442, 541, 588, 1342
TseFI GTSAC 3 cut(s) 530, 579, 821
TseI GCWGC 3 cut(s) 239, 848, 1084
Tsp45I GTSAC 3 cut(s) 530, 579, 821
TspGWI ACGGA 6 cut(s) 272, 628, 1013, 1247, 1460, 1503
TspRI CASTG 4 cut(s) 442, 541, 588, 1342
Van91I CCANNNNNTGG 1 cut(s) 1508
VpaK11BI GGWCC 3 cut(s) 398, 740, 1670
XagI CCTNNNNNAGG 1 cut(s) 48
XapI RAATTY 1 cut(s) 1275
XceI RCATGY 1 cut(s) 460
XhoI CTCGAG 1 cut(s) 96
XmiI GTMKAC 1 cut(s) 1485
XmnI GAANNNNTTC 2 cut(s) 304, 1459
XspI CTAG 4 cut(s) 206, 782, 1217, 1581
ZrmI AGTACT 1 cut(s) 424
Zsp2I ATGCAT 1 cut(s) 701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.